View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17532_high_20 (Length: 265)
Name: NF17532_high_20
Description: NF17532
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17532_high_20 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 3 - 265
Target Start/End: Original strand, 41261424 - 41261674
Alignment:
| Q |
3 |
atcaccaaggatttcttgatcatagtcaattgaatcgaacacaatatgcaaccattgtcatttcaataaaaacagtaacagaaaataatatagattataa |
102 |
Q |
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| T |
41261424 |
atcaccaaggatttcttgatcatagtcaattgaatcgaacacaatatgcaaccattgtcatttcaataaaaacagtaacagaaaataa------------ |
41261511 |
T |
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| Q |
103 |
tataacaaagccgaaacaaataatgaatactactactaataaaacagtaatgatttcatcaataaaacaataggttaagaatatgaattcattgaggatt |
202 |
Q |
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| T |
41261512 |
tataacaaagccgaaacaaataatgaatactactactaataaaacagcaatgatttcatcaataaaacaataggttaagaatatgaattcattgaggatt |
41261611 |
T |
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| Q |
203 |
gaaatgataaaagaaattcaaaggggaaatggaaagaaaggaaagactaacctgttgttgtgt |
265 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
41261612 |
gaaatgataaaagaaattcaaaggggaaatggaaagaaaggaaagactgacctgttgttgtgt |
41261674 |
T |
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