View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17533_low_7 (Length: 390)
Name: NF17533_low_7
Description: NF17533
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17533_low_7 |
 | |
|
| [»] scaffold0294 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 360; Significance: 0; HSPs: 28)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 1 - 379
Target Start/End: Original strand, 5352946 - 5353325
Alignment:
| Q |
1 |
ccatacttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
5352946 |
ccatacttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttagcaa |
5353045 |
T |
|
| Q |
101 |
cacatttttaaggccatatgaagttatgttattttgggttgaagtatagataatgcacatcattgtcttcaagttacgcccttccaccagagggacatga |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5353046 |
cacatttttaaggccatatgaagttatgttattttgggttgacgtatagataatgcacatcattgtcttcaagttacgcccttccaccagagggacatga |
5353145 |
T |
|
| Q |
201 |
aaagttacagaagaaccttcagagtagaaggttaaccaatttggataactatcaccagggaggaaacaaccaccactcccattaacatccatattctgtg |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
5353146 |
aaagttacagaagaaccttcagagtagaaggttaaccaatttggataactatcaccagggaggaaacaaccaccacttccattaacatccatattctgtg |
5353245 |
T |
|
| Q |
301 |
aaagtaaagagggctcaaaa-tttaattgacaagcatattaatataatcttatcatttattcgacgattaaacatatatt |
379 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5353246 |
aaagtaaagagggctcaaaattttaattgacaagcatattaatataatcttatcatttattcgacgattaaacatatatt |
5353325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 3 - 298
Target Start/End: Original strand, 5100903 - 5101198
Alignment:
| Q |
3 |
atacttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaaca |
102 |
Q |
| |
|
|||||||||||||| ||| | ||||||||||||||||||| | ||||||||| |||||||| ||||||||||| ||||||||||||||||| || |||| |
|
|
| T |
5100903 |
atacttgatactaccctcagagcctcctcatcttcaaaggagactaatgcctcgctcttatagagctgaatggtggcctttgtgtaatttttcactaaca |
5101002 |
T |
|
| Q |
103 |
catttttaaggccatatgaagttatgttattttgggttgaagtatagataatgcacatcattgtcttcaagttacgcccttccaccagagggacatgaaa |
202 |
Q |
| |
|
|||||||||||||| ||| |||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| | || |
|
|
| T |
5101003 |
catttttaaggccacttgatgttatgttatctggggttgaagtatagacaatgcacatcattgtcttcaagttacgcccttccacttgagggacttctaa |
5101102 |
T |
|
| Q |
203 |
agttacagaagaaccttcagagtagaaggttaaccaatttggataactatcaccagggaggaaacaaccaccactcccattaacatccatattctg |
298 |
Q |
| |
|
|||||||||||||||||| || |||||||||||||||||||||||||||||||| || |||||||||||||| | ||| ||||| |||||||| |
|
|
| T |
5101103 |
agttacagaagaaccttccgaaagaaaggttaaccaatttggataactatcaccaggaagcaaacaaccaccactactattgacatctatattctg |
5101198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 5 - 361
Target Start/End: Original strand, 5156100 - 5156457
Alignment:
| Q |
5 |
acttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaacaca |
104 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||| | |||| |
|
|
| T |
5156100 |
acttgatactaccctctgcccctcttcatcttcaaaggaggccaatgcctcactcttataaagctgaatggtggcctttgtgtaatttttcaataacatg |
5156199 |
T |
|
| Q |
105 |
tttttaaggccatatgaagttatgttattttgggttgaagtatagataatgcacatcattgtcttcaagttacgcccttccaccagagggacatgaaaag |
204 |
Q |
| |
|
|||||||||||| | |||| |||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| || | ||| |
|
|
| T |
5156200 |
tttttaaggccactacatgttacattatctggggttgaagtatagacaatgcacatcattgtcttcaagttacgcccttccacttgaggaacttcaaatt |
5156299 |
T |
|
| Q |
205 |
ttacagaagaaccttcagagtagaaggttaaccaatttggataactatcaccagggaggaaacaaccaccactcccattaacatccatattctgtgaaag |
304 |
Q |
| |
|
| ||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||| |
|
|
| T |
5156300 |
tcacagaagaaccttcagaattataggttaaccaatttggataactatcactggggaggaaacaaccaccactcccattgccatccatattctggaaaag |
5156399 |
T |
|
| Q |
305 |
taaaga-gggctcaaaatttaattgacaagcatattaatataatcttatcatttattc |
361 |
Q |
| |
|
|||||| ||||||||||||||||| ||| |||||||||| | |||||||||||||| |
|
|
| T |
5156400 |
taaagatcggctcaaaatttaattgtaaagtatattaatatcaccttatcatttattc |
5156457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 3 - 298
Target Start/End: Original strand, 5136004 - 5136299
Alignment:
| Q |
3 |
atacttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaaca |
102 |
Q |
| |
|
|||||||||||||| ||| | ||||||||||||||||||| |||||| || ||||| || ||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
5136004 |
atacttgatactaccctcagagcctcctcatcttcaaaggaggctaatgcttcgctcttgtagagctgaatggtggcctttgtgtaattttttaccaaca |
5136103 |
T |
|
| Q |
103 |
catttttaaggccatatgaagttatgttattttgggttgaagtatagataatgcacatcattgtcttcaagttacgcccttccaccagagggacatgaaa |
202 |
Q |
| |
|
|||||||||||||| ||| |||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| | || |
|
|
| T |
5136104 |
catttttaaggccacttgatgttatgttatctggggttgaagtatagacaatgcacatcattgtcttcaagttacgcccttccacttgagggacttctaa |
5136203 |
T |
|
| Q |
203 |
agttacagaagaaccttcagagtagaaggttaaccaatttggataactatcaccagggaggaaacaaccaccactcccattaacatccatattctg |
298 |
Q |
| |
|
|||||||||||||||||| || |||||||||||||||||||||||||||||||| || |||||||||||||| | ||| ||||| |||||||| |
|
|
| T |
5136204 |
agttacagaagaaccttccgaaagaaaggttaaccaatttggataactatcaccaggaagcaaacaaccaccacttctattgacatctatattctg |
5136299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 6 - 349
Target Start/End: Original strand, 5180862 - 5181206
Alignment:
| Q |
6 |
cttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaacacat |
105 |
Q |
| |
|
||||||||||| ||||| ||||| ||||||||||| || | ||| | || |||||||| ||||||||||||||||||||||||||||| || |||| | |
|
|
| T |
5180862 |
cttgatactaccctctgaccctcttcatcttcaaaagagactaacgtatcactcttatagagctgaatggtagcctttgtgtaatttttaactaacatgt |
5180961 |
T |
|
| Q |
106 |
ttttaaggccatatgaagttatgttattttgggttgaagtatagataatgcacatcattgtcttcaagttacgcccttccaccagagggacatgaaaagt |
205 |
Q |
| |
|
||||||||||| ||| |||| |||| | | |||||| |||||| || | ||||||||||||||||||||| |||||||||| |||||| | |||||| |
|
|
| T |
5180962 |
ttttaaggccacttgatgttacattatgtggagttgaattatagacaacgagcatcattgtcttcaagttacgtccttccaccaaagggacttcaaaagt |
5181061 |
T |
|
| Q |
206 |
tacagaagaaccttcagagtagaaggttaaccaatttggataactatcaccagggaggaaacaaccaccactcccattaacatccatattctgtgaaagt |
305 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||| |||||||||| |||| |||||||||||||||||| || |
|
|
| T |
5181062 |
tacagaagaaccttcagaattaaaggttaaccaatttggataactatcactggggaggaaataaccaccactttcattgacatccatattctgtgaatgt |
5181161 |
T |
|
| Q |
306 |
aaaga-gggctcaaaatttaattgacaagcatattaatataatct |
349 |
Q |
| |
|
||||| || |||||| ||| |||||||| || ||||||| |||| |
|
|
| T |
5181162 |
aaagacaggttcaaaacttatttgacaagtattttaatatcatct |
5181206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 18 - 344
Target Start/End: Complemental strand, 5439206 - 5438879
Alignment:
| Q |
18 |
ctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaacacatttttaaggccat |
117 |
Q |
| |
|
||||||||||||||||||||||| || | || ||||| |||||||| ||||||||||| |||||||||| |||| | ||||| |||||| |||||| || |
|
|
| T |
5439206 |
ctctgcccctcctcatcttcaaaagagactacagcctcactcttatagagctgaatggtggcctttgtgtgatttatcaccaatacatttataaggctat |
5439107 |
T |
|
| Q |
118 |
atgaagttatgttattttgggttgaagtatagataatgcacatcattgtcttcaagttacgcccttccaccagagggacatgaaaagttacagaagaacc |
217 |
Q |
| |
|
||| |||||||||| | ||||||| ||||| ||||||||||| || | |||| |||||||||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
5439106 |
ctgatgttatgttatccggagttgaagaatagacaatgcacatcaatgacatcaaattacgcccttccacttgagggacttgaaaagttacagaagaacc |
5439007 |
T |
|
| Q |
218 |
ttcagagtagaaggttaaccaatttggataactatcaccagggaggaaacaaccaccactcccattaacatccatattctgtgaaagtaaaga-gggctc |
316 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||||||| ||||| |||| |||| |||||||||| |||||||||||||||||||| | | | |||| |
|
|
| T |
5439006 |
ttcagaattaaaggttaaccaatttggataactatcaccggggagaaaacgaccatcactcccattgacatccatattctgtgaaagcagatataagctc |
5438907 |
T |
|
| Q |
317 |
aaaatttaattgacaagcatattaatat |
344 |
Q |
| |
|
|||||||||| |||| | |||||||||| |
|
|
| T |
5438906 |
aaaatttaatcgacaggtatattaatat |
5438879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 3 - 275
Target Start/End: Complemental strand, 5448819 - 5448547
Alignment:
| Q |
3 |
atacttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaaca |
102 |
Q |
| |
|
||||||||||||| ||||||||||||| |||||||||||||| ||||| ||| |||||||| | |||||||||||||||||||||||||| ||||||| |
|
|
| T |
5448819 |
atacttgatactaacctctgcccctccttatcttcaaaggaaactaatgtctcactcttatagatttgaatggtagcctttgtgtaatttttcaccaaca |
5448720 |
T |
|
| Q |
103 |
catttttaaggccatatgaagttatgttattttgggttgaagtatagataatgcacatcattgtcttcaagttacgcccttccaccagagggacatgaaa |
202 |
Q |
| |
|
|||||||||||||| || |||| |||| | ||||||||||||||| ||||||||||| || | |||| | |||| ||||||| ||||||| | ||| |
|
|
| T |
5448719 |
catttttaaggccactagatgttacattatctggggttgaagtatagacaatgcacatcaatgacgtcaattgacgctcttccacttgagggacttcaaa |
5448620 |
T |
|
| Q |
203 |
agttacagaagaaccttcagagtagaaggttaaccaatttggataactatcaccagggaggaaacaaccacca |
275 |
Q |
| |
|
||||||||||||||||||||| | ||||||||||||| ||||||||||||||| || ||||||||||||||| |
|
|
| T |
5448619 |
agttacagaagaaccttcagaattaaaggttaaccaatctggataactatcaccgggaaggaaacaaccacca |
5448547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 3 - 298
Target Start/End: Complemental strand, 5351610 - 5351315
Alignment:
| Q |
3 |
atacttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaaca |
102 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||| ||| ||||||| ||||||||||||||||| || |||| |
|
|
| T |
5351610 |
atacttgatactaacctctgcccctcctcatcttcaaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaaca |
5351511 |
T |
|
| Q |
103 |
catttttaaggccatatgaagttatgttattttgggttgaagtatagataatgcacatcattgtcttcaagttacgcccttccaccagagggacatgaaa |
202 |
Q |
| |
|
|||||||||||| ||| |||| |||| ||||||||||||||| |||||||||||||||||||||| |||||||||||| |||| || | ||| |
|
|
| T |
5351510 |
tgtttttaaggccacttgatgttacgttaccaggggttgaagtatagactatgcacatcattgtcttcaagtcacgcccttccacttgaggaacttcaaa |
5351411 |
T |
|
| Q |
203 |
agttacagaagaaccttcagagtagaaggttaaccaatttggataactatcaccagggaggaaacaaccaccactcccattaacatccatattctg |
298 |
Q |
| |
|
| ||||||||| |||| || |||||||||||||||||||||||||||||||| || |||||||||| ||||| ||| | |||||||||||| |
|
|
| T |
5351410 |
tttcacagaagaaacttctgaaataaaggttaaccaatttggataactatcaccaggaagcaaacaaccactactcctattgagatccatattctg |
5351315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 5 - 328
Target Start/End: Complemental strand, 5372305 - 5371978
Alignment:
| Q |
5 |
acttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaacaca |
104 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||||||| | |||||| || |||||||||||||||||||| ||||||||||||||||| | |||| |
|
|
| T |
5372305 |
acttgatactaccctctgcccctcttcatcttcaaaggagactaatgcttcactcttataaagctgaatggtggcctttgtgtaatttttcaataacatg |
5372206 |
T |
|
| Q |
105 |
tttttaaggccatatgaagttatgttattttgggttgaagtatagataatgcacatcattgtcttcaagttacgcccttccaccagagggacatgaaaag |
204 |
Q |
| |
|
|||||||||||| || |||| |||| | ||||||||| ||| | ||||||| |||||||||||||||||||||||||| |||| || | ||| |
|
|
| T |
5372205 |
tttttaaggccactagatgttacattatccggagttgaagtacagacattgcacataattgtcttcaagttacgcccttccacttgaggaacttcaaatt |
5372106 |
T |
|
| Q |
205 |
ttacagaagaaccttcagagtagaaggttaaccaatttggataactatcaccagggaggaaacaaccaccactcccattaacatccatattctg-tg--a |
301 |
Q |
| |
|
| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||| || | |
|
|
| T |
5372105 |
tcacagaagaaccttcagaactataggttaaccaatttggataactatcattggggaggaaacaaccaccactcccgttgccatccatattctgctggaa |
5372006 |
T |
|
| Q |
302 |
aagtaaaga-gggctcaaaatttaattg |
328 |
Q |
| |
|
||||||||| ||||||||||||||||| |
|
|
| T |
5372005 |
aagtaaagataggctcaaaatttaattg |
5371978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 3 - 361
Target Start/End: Complemental strand, 5398256 - 5397897
Alignment:
| Q |
3 |
atacttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaaca |
102 |
Q |
| |
|
|||||||||||||| || |||||||| |||| ||||||||| | ||| ||||| |||||||| ||||||||||| ||||||||||||||| | || |||| |
|
|
| T |
5398256 |
atacttgatactaccctttgcccctcttcatgttcaaaggagaataacgcctcactcttatagagctgaatggtggcctttgtgtaatttatcactaaca |
5398157 |
T |
|
| Q |
103 |
catttttaaggccatatgaagttatgttattttgggttgaagtatagataatgcacatcattgtcttcaagttacgcccttccaccagagggacatgaaa |
202 |
Q |
| |
|
|||||||||||| || |||| |||| | ||||||||||| | |||||||||||||||||||||||||||||||||||| |||| || | ||| |
|
|
| T |
5398156 |
tgtttttaaggccactagatgttacattatccagagttgaagtatacacaatgcacatcattgtcttcaagttacgcccttccacatgaggaacttcaaa |
5398057 |
T |
|
| Q |
203 |
agttacagaagaaccttcag-agtagaaggttaaccaatttggataactatcaccagggaggaaacaaccaccactcccattaacatccatattctgtga |
301 |
Q |
| |
|
||||| ||||||||| |||| | || || ||||||||||||||||||||||| | |||||||||||||||||| ||||||| |||| ||||||| | |
|
|
| T |
5398056 |
agttaaagaagaaccctcagaactataa-gttaaccaatttggataactatcgctggggaggaaacaaccaccattcccattgccatcgatattctagaa |
5397958 |
T |
|
| Q |
302 |
aagtaaaga-gggctcaaaatttaattgacaagcatattaatataatcttatcatttattc |
361 |
Q |
| |
|
||||||||| | ||||||||||||||| |||| ||||||||| | |||||| |||||| |
|
|
| T |
5397957 |
aagtaaagatagtctcaaaatttaattgtcaagtgtattaatatcacgttatcaattattc |
5397897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 3 - 305
Target Start/End: Original strand, 5126714 - 5127019
Alignment:
| Q |
3 |
atacttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaaca |
102 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||| | | ||||||||||||||| || |||||||| ||||| ||||||||||| ||||||| |
|
|
| T |
5126714 |
atacttgatactactctctccccctcctcatcttcaaaggagactgctgcctctctcttatagagttgaatggtggccttcgtgtaatttttcaccaaca |
5126813 |
T |
|
| Q |
103 |
catttttaaggccatatgaagttatgttattttgggttgaagtatagataatgcacatcat---tgtcttcaagttacgcccttccaccagagggacatg |
199 |
Q |
| |
|
|| ||||||||| ||| |||||||||| |||||||| ||||| |||||| ||||| | ||||||| ||||||||| ||| |||| || | |
|
|
| T |
5126814 |
agcttgtaaggccatctgatgttatgttatccaaggttgaagaatagacaatgcatatcattactttcttcaacgtacgccctttcacttgaggtacttc |
5126913 |
T |
|
| Q |
200 |
aaaagttacagaagaaccttcagagtagaaggttaaccaatttggataactatcaccagggaggaaacaaccaccactcccattaacatccatattctgt |
299 |
Q |
| |
|
||||||||| ||||||||||| |||| ||||| |||||||| |||||||||||||||||| || |||| |||||||| || | | |||||||||||||| |
|
|
| T |
5126914 |
aaaagttaccgaagaaccttcggagttgaaggctaaccaatatggataactatcaccaggaagcaaactaccaccacaccaactggcatccatattctgt |
5127013 |
T |
|
| Q |
300 |
gaaagt |
305 |
Q |
| |
|
||||| |
|
|
| T |
5127014 |
aaaagt |
5127019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 136 - 361
Target Start/End: Original strand, 5283430 - 5283655
Alignment:
| Q |
136 |
gggttgaagtatagataatgcacatcattgtcttcaagttacgcccttccaccagagggacatgaaaagttacagaagaaccttcagagtagaaggttaa |
235 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||||||||| |||||| || ||||||||| ||||||||||||||||||||| || ||||| || |
|
|
| T |
5283430 |
gggttgaagtatagacaatgcacatcattgacttcaagttacacccttcaacttgagggacatcaaaagttacagaagaaccttctgaactaaaggtcaa |
5283529 |
T |
|
| Q |
236 |
ccaatttggataactatcaccagggaggaaacaaccaccactcccattaacatccatattctgtgaaagtaaagagggctcaaaatttaattgacaagca |
335 |
Q |
| |
|
||||| |||||||||||||||||| || |||||| ||||||||| ||| ||||||||||||||| ||||||| | ||||||||||| ||||||||| | |
|
|
| T |
5283530 |
ccaatctggataactatcaccaggaagcaaacaatcaccactcctattgacatccatattctgtaaaagtaaggtatgctcaaaattttattgacaagta |
5283629 |
T |
|
| Q |
336 |
tattaatataatcttatcatttattc |
361 |
Q |
| |
|
||| ||||| | ||||||||||||| |
|
|
| T |
5283630 |
tataaatatcactttatcatttattc |
5283655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 3 - 299
Target Start/End: Complemental strand, 5098421 - 5098125
Alignment:
| Q |
3 |
atacttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaaca |
102 |
Q |
| |
|
|||||||||| ||| ||||| | |||||||||||||||||| | |||||||| |||||||| ||||||||||| |||||||||| ||||| || |||| |
|
|
| T |
5098421 |
atacttgatattaccctctggctctcctcatcttcaaaggagaccaatgcctcactcttatagagctgaatggtggcctttgtgtggtttttcactaaca |
5098322 |
T |
|
| Q |
103 |
catttttaaggccatatgaagttatgttattttgggttgaagtatagataatgcacatcattgtcttcaagttacgcccttccaccagagggacatgaaa |
202 |
Q |
| |
|
|||||||||||| ||| | |||||| | ||||||||||||||| ||||||||||||||| |||||| |||| |||||||| | || || ||||| |
|
|
| T |
5098321 |
tgtttttaaggccacttgatatcatgttagctggggttgaagtatagacaatgcacatcattgttttcaagctacggccttccacttggggaacttgaaa |
5098222 |
T |
|
| Q |
203 |
agttacagaagaaccttcagagtagaaggttaaccaatttggataactatcaccagggaggaaacaaccaccactcccattaacatccatattctgt |
299 |
Q |
| |
|
|||||| |||||||||||||| | ||||||||||||| |||||||| |||| || || |||||| |||| |||||||| | ||||||||||||| |
|
|
| T |
5098221 |
agttaccgaagaaccttcagaatgaaaggttaaccaatctggataaccatcagtgggaagcaaacaatcaccgctcccattgagatccatattctgt |
5098125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 3 - 298
Target Start/End: Complemental strand, 5427110 - 5426815
Alignment:
| Q |
3 |
atacttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaaca |
102 |
Q |
| |
|
||||||||||||||||| | |||||||||||||||||| || | |||| |||| |||||||||||||||||| | ||||||||||||||||| | |||| |
|
|
| T |
5427110 |
atacttgatactactctttccccctcctcatcttcaaatgacactaatacctcactcttataaagctgaatgatggcctttgtgtaatttttcaataaca |
5427011 |
T |
|
| Q |
103 |
catttttaaggccatatgaagttatgttattttgggttgaagtatagataatgcacatcattgtcttcaagttacgcccttccaccagagggacatgaaa |
202 |
Q |
| |
|
||||||||||| ||| ||| ||| ||||||||||||||| |||||||| |||||||||| ||||||||||||||| | || || ||||| |
|
|
| T |
5427010 |
tgattttaaggccacttgatattacattaccaggggttgaagtatagactatgcacataattgtcttcaggttacgcccttccacttgtggaacttgaaa |
5426911 |
T |
|
| Q |
203 |
agttacagaagaaccttcagagtagaaggttaaccaatttggataactatcaccagggaggaaacaaccaccactcccattaacatccatattctg |
298 |
Q |
| |
|
||||||||||||||||||||| |||||||||| ||||||||||| |||||||| || ||| ||| |||||||| ||| | |||||||||||| |
|
|
| T |
5426910 |
agttacagaagaaccttcagaactataggttaaccactttggataactgtcaccaggaagcaaaaaactaccactcctattgagatccatattctg |
5426815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 3 - 299
Target Start/End: Complemental strand, 5346239 - 5345940
Alignment:
| Q |
3 |
atacttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaaca |
102 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||||||||| || |||||||||||| || ||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
5346239 |
atacttgatacaactctctggccctcctcatcttcaaaggcggctactgcctctctcttgtatagctgaatggtagcctttgtgtaatttttcaccaaca |
5346140 |
T |
|
| Q |
103 |
catttttaaggccatatgaagttatgttattttgggttgaagtatagataatgcacatc---attgtcttcaagttacgcccttccaccagagggacatg |
199 |
Q |
| |
|
||| | ||||||| || ||||| |||| ||||||| ||||| || || ||| ||||||||||| | ||||||||||| |||| || | |
|
|
| T |
5346139 |
agtttctcaggccatcagatgttatattatccgaagttgaagaatagacaacacatatcgttattgtcttcaacattcgcccttccacttgaggaacttc |
5346040 |
T |
|
| Q |
200 |
aaaagttacagaagaaccttcagagtagaaggttaaccaatttggataactatcaccagggaggaaacaaccaccactcccattaacatccatattctgt |
299 |
Q |
| |
|
|||||| ||||||||||||||||| | ||| |||||||||| ||||||||| |||||||| || |||||||||||||||||||| |||||||||||||| |
|
|
| T |
5346039 |
aaaagtaacagaagaaccttcagaattgaaagttaaccaatctggataactgtcaccaggaagcaaacaaccaccactcccattctcatccatattctgt |
5345940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 3 - 220
Target Start/End: Original strand, 5065534 - 5065754
Alignment:
| Q |
3 |
atacttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaaca |
102 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||| | |||||||||||||||||||||| |
|
|
| T |
5065534 |
atacttgatactactctctgcccctcctcatcttcaaaggagattaacgcctctctcttatagagctgaatggtggattttgtgtaattttttaccaaca |
5065633 |
T |
|
| Q |
103 |
catttttaaggccatatgaagttatgttattttgggttgaagtatagataatgca---catcattgtcttcaagttacgcccttccaccagagggacatg |
199 |
Q |
| |
|
|||| | ||||||| || | |||||||| ||||||||| ||||| |||||| ||| ||||||||||| ||||||||| || ||||||| | |
|
|
| T |
5065634 |
aatttgtgaggccatcagatgctatgttatccggggttgaagaatagacaatgcatatcattattgtcttcaacatacgccctttcatttgagggacttc |
5065733 |
T |
|
| Q |
200 |
aaaagttacagaagaaccttc |
220 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
5065734 |
aaaagttacagaagaaccttc |
5065754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 3 - 304
Target Start/End: Complemental strand, 5177949 - 5177645
Alignment:
| Q |
3 |
atacttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaaca |
102 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||| || ||||||| |
|
|
| T |
5177949 |
atacttgatactactctctgaccctcttcatcttcaaaggaggctaatgcctctctcttataaagctgaatggtggcttttgtgtaattcttaaccaaca |
5177850 |
T |
|
| Q |
103 |
catttttaaggccatatgaagttatgttattttgggttgaagtatagataatgca---catcattgtcttcaagttacgcccttccaccagagggacatg |
199 |
Q |
| |
|
||| |||||||| ||| ||||| |||| ||||||||| |||| |||||| |||||||||||| || | | ||||||||| ||||||| | |
|
|
| T |
5177849 |
agtttgcaaggccatttgatgttatattatccagggttgaagaatagtcaatgcatatcatcattgtctttaaagtgcacccttccacttgagggacttc |
5177750 |
T |
|
| Q |
200 |
aaaagttacagaagaaccttcagagtagaaggttaaccaatttggataactatcaccagggaggaaacaaccaccactcccattaacatccatattctgt |
299 |
Q |
| |
|
||| |||| ||||||||||| | | |||||||||||||| |||| ||||||||| ||| | ||||||||||||| |||||| |||||||||||||| |
|
|
| T |
5177749 |
aaacattaccgaagaaccttcgcaattgaaggttaaccaatctggacaactatcactaggaaacaaacaaccaccacacccattctcatccatattctgt |
5177650 |
T |
|
| Q |
300 |
gaaag |
304 |
Q |
| |
|
|||| |
|
|
| T |
5177649 |
aaaag |
5177645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 3 - 308
Target Start/End: Original strand, 5688988 - 5689296
Alignment:
| Q |
3 |
atacttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaaca |
102 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||||||||| | ||||||||| |||||||||||||||||||| || ||||||||||| || ||||||| |
|
|
| T |
5688988 |
atacttgatactactctctgtccctcttcatcttcaaaggagactaatgcctcgctcttataaagctgaatggtggcttttgtgtaattcttcaccaaca |
5689087 |
T |
|
| Q |
103 |
catttttaaggccatatgaagttatgttattttgggttgaagtatagataatgca---catcattgtcttcaagttacgcccttccaccagagggacatg |
199 |
Q |
| |
|
||| |||||||| ||| |||||||||| |||||| || |||| ||||| ||||| |||||| || | ||||||||||| ||||||| | |
|
|
| T |
5689088 |
agtttgcaaggccatttgatgttatgttatccagggttgtagaatagtcgatgcatatcatcaatgtctttaaagtgcgcccttccacttgagggacttc |
5689187 |
T |
|
| Q |
200 |
aaaagttacagaagaaccttcagagtagaaggttaaccaatttggataactatcaccagggaggaaacaaccaccactcccattaacatccatattctgt |
299 |
Q |
| |
|
||| |||| ||||||||||| | | |||||||||||||| |||| ||||||||| ||| | ||||||||||||| |||||| |||||||||||||| |
|
|
| T |
5689188 |
aaacattaccgaagaaccttcgcaattgaaggttaaccaatctggacaactatcactaggaaacaaacaaccaccacacccattctcatccatattctgt |
5689287 |
T |
|
| Q |
300 |
gaaagtaaa |
308 |
Q |
| |
|
|||||||| |
|
|
| T |
5689288 |
aaaagtaaa |
5689296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 47 - 361
Target Start/End: Complemental strand, 5334344 - 5334033
Alignment:
| Q |
47 |
taatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaacacatttttaaggccatatgaagttatgttattttgggttgaagta |
146 |
Q |
| |
|
||||||||| |||||||| || |||||||| ||||||||||||||| | || |||| |||||||||||| ||| || | |||| | |||||||| || |
|
|
| T |
5334344 |
taatgcctcactcttatagagttgaatggtggcctttgtgtaatttatcactaacatgtttttaaggccacttgatgt-acattatctggggttgaatta |
5334246 |
T |
|
| Q |
147 |
tagataatgcacatcattgtcttcaagttacgcccttccaccagagggacatgaaaagttacagaagaaccttcagagtagaaggttaaccaatttggat |
246 |
Q |
| |
|
|||| |||||||||||||||||||||||||| ||||||||| |||| || | ||| | ||||||||||||||||| | || ||||||||||||||| |
|
|
| T |
5334245 |
tagaaaatgcacatcattgtcttcaagttacccccttccacttgaggaacttcaaatttcacagaagaaccttcagaattatagcttaaccaatttggat |
5334146 |
T |
|
| Q |
247 |
aactatcaccagggaggaaacaaccaccactcccattaacatccatattctgtgaaagtaaaga-gggctcaaaatttaattgacaagcatattaatata |
345 |
Q |
| |
|
||||||||| | |||||||||||||||||||||| ||||||||||||| ||| |||||| |||||||||||| | |||| || |||||||||| |
|
|
| T |
5334145 |
aactatcac---tggggaaacaaccaccactcccattgccatccatattctggaaaattaaagatcggctcaaaatttcaatgacgagtatattaatatt |
5334049 |
T |
|
| Q |
346 |
atcttatcatttattc |
361 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
5334048 |
tgcttatcatttattc |
5334033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 3 - 305
Target Start/End: Original strand, 5242597 - 5242902
Alignment:
| Q |
3 |
atacttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaaca |
102 |
Q |
| |
|
|||||| ||||||||||| |||||| |||||||||||||| || |||||||||||| || ||||||||||| ||||||||||||||||| || |||| |
|
|
| T |
5242597 |
atacttcatactactctcagccccttctcatcttcaaaggcggctactgcctctctcttgtagagctgaatggtggcctttgtgtaatttttcactaaca |
5242696 |
T |
|
| Q |
103 |
catttttaaggccatatgaagttatgttattttgggttgaagtatagataatgcacatc---attgtcttcaagttacgcccttccaccagagggacatg |
199 |
Q |
| |
|
||| |||||||| || ||||| ||| ||||||| ||||| | || ||| ||||||||||| | ||||||||||| ||||||| | |
|
|
| T |
5242697 |
agtttccaaggccatcagatgttatactatccgaagttgaagaatagacagcacatatcgttattgtcttcaacattcgcccttccacttgagggacttc |
5242796 |
T |
|
| Q |
200 |
aaaagttacagaagaaccttcagagtagaaggttaaccaatttggataactatcaccagggaggaaacaaccaccactcccattaacatccatattctgt |
299 |
Q |
| |
|
|||||| ||||||||||||||||| | |||||||||||||| ||||||||| |||||||| || |||||||||||||||||||| |||||||||||||| |
|
|
| T |
5242797 |
aaaagtaacagaagaaccttcagaatcgaaggttaaccaatctggataactgtcaccaggaagcaaacaaccaccactcccattctcatccatattctgt |
5242896 |
T |
|
| Q |
300 |
gaaagt |
305 |
Q |
| |
|
||||| |
|
|
| T |
5242897 |
taaagt |
5242902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 3 - 299
Target Start/End: Complemental strand, 5279774 - 5279475
Alignment:
| Q |
3 |
atacttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaaca |
102 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||| || ||||||| |
|
|
| T |
5279774 |
atacttgatactactctctgaccctcttcatcttcaaaggaggctaatgcctctctcttataaagctgaatggtggcttttgtgtaattcttcaccaaca |
5279675 |
T |
|
| Q |
103 |
catttttaaggccatatgaagttatgttattttgggttgaagtatagataatgcacatcat---tgtcttcaagttacgcccttccaccagagggacatg |
199 |
Q |
| |
|
||| |||||||| ||| ||||| |||| ||||||||| |||| |||||| ||||| |||||| || | | ||||||||| ||||||| | |
|
|
| T |
5279674 |
agtttgcaaggccatttgatgttatattatccagggttgaagaatagtcaatgcatatcatcaatgtctttaaagtgcacccttccacttgagggacttc |
5279575 |
T |
|
| Q |
200 |
aaaagttacagaagaaccttcagagtagaaggttaaccaatttggataactatcaccagggaggaaacaaccaccactcccattaacatccatattctgt |
299 |
Q |
| |
|
||| |||| ||||||||||| | | |||||||||||||| |||| ||||||||| || | ||||||||||||| |||||| |||||||||||||| |
|
|
| T |
5279574 |
aaacattaccgaagaaccttcgcaattgaaggttaaccaatctggacaactatcacttggaaacaaacaaccaccacacccattctcatccatattctgt |
5279475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 5 - 297
Target Start/End: Original strand, 23127397 - 23127689
Alignment:
| Q |
5 |
acttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaacaca |
104 |
Q |
| |
|
||||||||||| |||| ||| ||||||||||| || || | ||||| |||||||||||| | |||||||||| ||||||||||||||||||||||||| |
|
|
| T |
23127397 |
acttgatactaagctcttcccttcctcatcttcgaacgagactaatgtctctctcttatagatctgaatggtaccctttgtgtaattttttaccaacacg |
23127496 |
T |
|
| Q |
105 |
tttttaaggccatatgaagttatgttattttgggttgaagtatagataatgcacatcattgtcttcaagttacgcccttccaccagagggacatgaaaag |
204 |
Q |
| |
|
||||||| ||||| || || ||||||| | |||||||||||| || || ||||| |||||||||| |||| |||||||||| |||| | | |||| |
|
|
| T |
23127497 |
tttttaacgccatccgaggtaatgttatctggggttgaagtattgacaacacacattattgtcttcacgttatgcccttccacttgaggagcttcaaaac |
23127596 |
T |
|
| Q |
205 |
ttacagaagaaccttcagagtagaaggttaaccaatttggataactatcaccagggaggaaacaaccaccactcccattaacatccatattct |
297 |
Q |
| |
|
||||||||||||||||| | ||| |||||| | |||||||||||| ||| ||| ||||||||||||| ||||| ||||| ||||||| |
|
|
| T |
23127597 |
ttacagaagaaccttcaaaaccgaaacctaaccagtctggataactatcttcagtgagaaaacaaccaccacatccattgacatctatattct |
23127689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 136 - 259
Target Start/End: Original strand, 5256368 - 5256491
Alignment:
| Q |
136 |
gggttgaagtatagataatgcacatcattgtcttcaagttacgcccttccaccagagggacatgaaaagttacagaagaaccttcagagtagaaggttaa |
235 |
Q |
| |
|
||||||||||||||| |||||||||||||| | |||||||||||||||| || ||||| | |||||||||||||||||||||||| ||||||| |
|
|
| T |
5256368 |
gggttgaagtatagacaatgcacatcattgacatcaagttacgcccttcaacttcggggacttcaaaagttacagaagaaccttcagaactataggttaa |
5256467 |
T |
|
| Q |
236 |
ccaatttggataactatcaccagg |
259 |
Q |
| |
|
||||||||||| |||||||||||| |
|
|
| T |
5256468 |
ccaatttggatgactatcaccagg |
5256491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 5 - 187
Target Start/End: Complemental strand, 2939123 - 2938935
Alignment:
| Q |
5 |
acttgatactactctctgcccctcctcatc----ttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaa |
100 |
Q |
| |
|
|||||||||||| |||||||| || ||||| ||| ||||| | ||||||||| |||||||| ||||||||||| |||||| | |||||||| | | |
|
|
| T |
2939123 |
acttgatactaccctctgcccttcttcatccatcttcgaaggagactaatgcctcactcttatagagctgaatggtggcctttatataatttttcaatat |
2939024 |
T |
|
| Q |
101 |
cacatttttaaggccatatgaagttatgttattttgggttgaagtata--gataatgcacatcattgtcttcaagttacgcccttccac |
187 |
Q |
| |
|
|| |||||||||||| || |||| |||| | ||||| ||||||| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
2939023 |
catgtttttaaggccactagatgttacattatctggggtttaagtatatagacaatgcacatcattgtcttcaagttacgcccttccac |
2938935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 5072767 - 5072960
Alignment:
| Q |
3 |
atacttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaaca |
102 |
Q |
| |
|
||||||||||||| ||||| ||||| ||||||| ||||| | |||||||||||||||||| || |||||||| || || ||||||||||| |||| || |
|
|
| T |
5072767 |
atacttgatactaatctctcgccctcatcatctttgaaggagactaatgcctctctcttatatagttgaatggtggctttagtgtaatttttcaccatca |
5072866 |
T |
|
| Q |
103 |
catttttaaggccatatgaagttatgttattttgggttgaagtatagataatgcacatcattgtcttcaagttacgcccttccaccagagggac |
196 |
Q |
| |
|
||||||||||| | ||| || |||||| | | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||||| |
|
|
| T |
5072867 |
agtttttaaggccgtctgatactacattatttggtggtgaagaatagacaacgcatatcattgtcttcaatatgcgcccttccacttgagggac |
5072960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 5124528 - 5124709
Alignment:
| Q |
3 |
atacttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaaca |
102 |
Q |
| |
|
||||| ||||||| ||| ||||||||||| |||| ||| | | |||||| ||||||||||| || |||||||| |||| ||||||||||| |||| || |
|
|
| T |
5124528 |
atactcgatactaatctatgcccctcctcctcttgaaatgcgactaatgcatctctcttatagagttgaatggtccccttcgtgtaatttttcaccatca |
5124627 |
T |
|
| Q |
103 |
catttttaaggccatatgaagttatgttattttgg-gttgaagtatagataatgcacatcattgtcttcaagttacgccctt |
183 |
Q |
| |
|
|| |||||||||||| || | |||||| |||||| || | | ||||| ||||||||| |||||||| |||||||| |||| |
|
|
| T |
5124628 |
cagttttaaggccatccgatgctatgtttttttggagtcaatgaatagacaatgcacattattgtctttaagttacgtcctt |
5124709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 66 - 221
Target Start/End: Complemental strand, 5253696 - 5253538
Alignment:
| Q |
66 |
agctgaatggtagcctttgtgtaattttttaccaacacatttttaaggccatatgaagttatgttattttgggttgaagtatagataatgcacatc---a |
162 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||| |||| | | ||||| || ||| |||||| | ||||||||| |||| ||||| ||| | |
|
|
| T |
5253696 |
agctgaatggtggcctttgtgtaattttttaccaacaaatttgtgaagccatcagatgttgtgttatctggggttgaagattagacaatgcttatcttta |
5253597 |
T |
|
| Q |
163 |
ttgtcttcaagttacgcccttccaccagagggacatgaaaagttacagaagaaccttca |
221 |
Q |
| |
|
|||||||||| |||||||||||| ||||||| | ||||| |||||||||||||||| |
|
|
| T |
5253596 |
ttgtcttcaacatacgcccttccaattgagggactttaaaaggtacagaagaaccttca |
5253538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 276
Target Start/End: Complemental strand, 5384252 - 5384128
Alignment:
| Q |
152 |
aatgcacatcattgtcttcaagttacgcccttccaccagagggacatgaaaagttacagaagaaccttcagagtagaaggttaaccaatttggataacta |
251 |
Q |
| |
|
||||||||||| || ||| |||||| || ||||||| ||||| | | |||| ||||||||||||| ||| | | |||| ||||||| |||||||||||| |
|
|
| T |
5384252 |
aatgcacatcaatgactttaagttatgctcttccacttgaggggccttaaaaattacagaagaaccgtcacatttgaagcttaaccagtttggataacta |
5384153 |
T |
|
| Q |
252 |
tcaccagggaggaaacaaccaccac |
276 |
Q |
| |
|
||||| ||||| | ||||||||||| |
|
|
| T |
5384152 |
tcacctgggagaacacaaccaccac |
5384128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 158; Significance: 6e-84; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 3 - 355
Target Start/End: Original strand, 47985478 - 47985831
Alignment:
| Q |
3 |
atacttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaaca |
102 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| ||||||| ||||||| ||| |||||||| || |||||| | || |||||| |||| | || |||| |
|
|
| T |
47985478 |
atacttgatactactctctccccctcctcatctccaaaggagattaatgtctcactcttatagagttgaatgatggctcttgtgtgatttatcactaaca |
47985577 |
T |
|
| Q |
103 |
catttttaaggccatatgaagttatgttattttgggttgaagtatagataatgcacatcattgtcttcaagttacgcccttccaccagagggacatgaaa |
202 |
Q |
| |
|
| ||||||||||||| ||| ||||||| || | |||||||||||||| |||||||||||||||||| |||||| ||| |||||| ||||||| | ||| |
|
|
| T |
47985578 |
cgtttttaaggccatctgatgttatgtcatctgaggttgaagtatagacaatgcacatcattgtctttaagttatgcctttccacttgagggacttcaaa |
47985677 |
T |
|
| Q |
203 |
agttacagaagaaccttcagagtagaaggttaaccaatttggataactatcaccagggaggaaacaaccaccactcccattaacatccatattctgtgaa |
302 |
Q |
| |
|
|||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||| ||||||||||| || |
|
|
| T |
47985678 |
agttaccgaagaaccttcagaattaaaggttaaccaatttggataactatcaccagggagcaaacaacaatcactcccattaacagccatattctgtaaa |
47985777 |
T |
|
| Q |
303 |
agtaaaga-gggctcaaaatttaattgacaagcatattaatataatcttatcat |
355 |
Q |
| |
|
|||||||| |||||||||| ||||||| || |||||| ||| | |||||||| |
|
|
| T |
47985778 |
agtaaagatatgctcaaaattcaattgaccagtatattagtatcaccttatcat |
47985831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 3 - 355
Target Start/End: Original strand, 47994765 - 47995118
Alignment:
| Q |
3 |
atacttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaaca |
102 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| ||||||| ||||||| ||| |||||||| || |||||| | || |||||| |||| | || |||| |
|
|
| T |
47994765 |
atacttgatactactctctccccctcctcatctccaaaggagattaatgtctcactcttatagagttgaatgatggctcttgtgtgatttatcactaaca |
47994864 |
T |
|
| Q |
103 |
catttttaaggccatatgaagttatgttattttgggttgaagtatagataatgcacatcattgtcttcaagttacgcccttccaccagagggacatgaaa |
202 |
Q |
| |
|
| ||||||||||||| ||| ||||||| || | |||||||||||||| |||||||||||||||||| |||||| ||| |||||| ||||||| | ||| |
|
|
| T |
47994865 |
cgtttttaaggccatctgatgttatgtcatctgaggttgaagtatagacaatgcacatcattgtctttaagttatgcctttccacttgagggacttcaaa |
47994964 |
T |
|
| Q |
203 |
agttacagaagaaccttcagagtagaaggttaaccaatttggataactatcaccagggaggaaacaaccaccactcccattaacatccatattctgtgaa |
302 |
Q |
| |
|
|||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||| ||||||||||| || |
|
|
| T |
47994965 |
agttaccgaagaaccttcagaattaaaggttaaccaatttggataactatcaccagggagcaaacaacaatcactcccattaacagccatattctgtaaa |
47995064 |
T |
|
| Q |
303 |
agtaaaga-gggctcaaaatttaattgacaagcatattaatataatcttatcat |
355 |
Q |
| |
|
|||||||| |||||||||| ||||||| || |||||| ||| | |||||||| |
|
|
| T |
47995065 |
agtaaagatatgctcaaaattcaattgaccagtatattagtatcaccttatcat |
47995118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 3 - 355
Target Start/End: Original strand, 48004052 - 48004405
Alignment:
| Q |
3 |
atacttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaaca |
102 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| ||||||| ||||||| ||| |||||||| || |||||| | || |||||| |||| | || |||| |
|
|
| T |
48004052 |
atacttgatactactctctccccctcctcatctccaaaggagattaatgtctcactcttatagagttgaatgatggctcttgtgtgatttatcactaaca |
48004151 |
T |
|
| Q |
103 |
catttttaaggccatatgaagttatgttattttgggttgaagtatagataatgcacatcattgtcttcaagttacgcccttccaccagagggacatgaaa |
202 |
Q |
| |
|
| ||||||||||||| ||| ||||||| || | |||||||||||||| |||||||||||||||||| |||||| ||| |||||| ||||||| | ||| |
|
|
| T |
48004152 |
cgtttttaaggccatctgatgttatgtcatctgaggttgaagtatagacaatgcacatcattgtctttaagttatgcctttccacttgagggacttcaaa |
48004251 |
T |
|
| Q |
203 |
agttacagaagaaccttcagagtagaaggttaaccaatttggataactatcaccagggaggaaacaaccaccactcccattaacatccatattctgtgaa |
302 |
Q |
| |
|
|||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||| ||||||||||| || |
|
|
| T |
48004252 |
agttaccgaagaaccttcagaattaaaggttaaccaatttggataactatcaccagggagcaaacaacaatcactcccattaacagccatattctgtaaa |
48004351 |
T |
|
| Q |
303 |
agtaaaga-gggctcaaaatttaattgacaagcatattaatataatcttatcat |
355 |
Q |
| |
|
|||||||| |||||||||| ||||||| || |||||| ||| | |||||||| |
|
|
| T |
48004352 |
agtaaagatatgctcaaaattcaattgaccagtatattagtatcaccttatcat |
48004405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 3 - 355
Target Start/End: Original strand, 48013337 - 48013690
Alignment:
| Q |
3 |
atacttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaaca |
102 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| ||||||| ||||||| ||| |||||||| || |||||| | || |||||| |||| | || |||| |
|
|
| T |
48013337 |
atacttgatactactctctccccctcctcatctccaaaggagattaatgtctcactcttatagagttgaatgatggctcttgtgtgatttatcactaaca |
48013436 |
T |
|
| Q |
103 |
catttttaaggccatatgaagttatgttattttgggttgaagtatagataatgcacatcattgtcttcaagttacgcccttccaccagagggacatgaaa |
202 |
Q |
| |
|
| ||||||||||||| ||| ||||||| || | |||||||||||||| |||||||||||||||||| |||||| ||| |||||| ||||||| | ||| |
|
|
| T |
48013437 |
cgtttttaaggccatctgatgttatgtcatctgaggttgaagtatagacaatgcacatcattgtctttaagttatgcctttccacttgagggacttcaaa |
48013536 |
T |
|
| Q |
203 |
agttacagaagaaccttcagagtagaaggttaaccaatttggataactatcaccagggaggaaacaaccaccactcccattaacatccatattctgtgaa |
302 |
Q |
| |
|
|||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||| ||||||||||| || |
|
|
| T |
48013537 |
agttaccgaagaaccttcagaattaaaggttaaccaatttggataactatcaccagggagcaaacaacaatcactcccattaacagccatattctgtaaa |
48013636 |
T |
|
| Q |
303 |
agtaaaga-gggctcaaaatttaattgacaagcatattaatataatcttatcat |
355 |
Q |
| |
|
|||||||| |||||||||| ||||||| || |||||| ||| | |||||||| |
|
|
| T |
48013637 |
agtaaagatatgctcaaaattcaattgaccagtatattagtatcaccttatcat |
48013690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 121; Significance: 7e-62; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 3 - 275
Target Start/End: Original strand, 36213006 - 36213278
Alignment:
| Q |
3 |
atacttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaaca |
102 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| || | |||||||||||||||||| | |||||||||||||||||||| ||||||||||| || |
|
|
| T |
36213006 |
atacttgatactaatctctgcccctcctcatcttcaaatgagactaatgcctctctcttatagatctgaatggtagcctttgtgtgattttttaccatca |
36213105 |
T |
|
| Q |
103 |
catttttaaggccatatgaagttatgttattttgggttgaagtatagataatgcacatcattgtcttcaagttacgcccttccaccagagggacatgaaa |
202 |
Q |
| |
|
| |||||||| |||| ||| | |||||| | | | ||||||| ||||| ||| ||||| |||||||| |||||||| || ||||| ||||||||| ||| |
|
|
| T |
36213106 |
cgtttttaagtccatctgatgctatgttttctggagttgaagaatagacaatacacattattgtctttaagttacgtccatccactcgagggacatcaaa |
36213205 |
T |
|
| Q |
203 |
agttacagaagaaccttcagagtagaaggttaaccaatttggataactatcaccagggaggaaacaaccacca |
275 |
Q |
| |
|
| ||||||||||||||| | | |||||||||||||| |||||| |||||||||||| |||||||||||| |
|
|
| T |
36213206 |
aattacagaagaacctttgcaattgaaggttaaccaatcaggataatgatcaccagggagcaaacaaccacca |
36213278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 96; Significance: 6e-47; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 4337114 - 4336871
Alignment:
| Q |
1 |
ccatacttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaa |
100 |
Q |
| |
|
||||| ||||||| |||||||||| |||||||| ||| ||||| |||||||||||||||| | || |||||||| | |||||||| |||| | ||||| |
|
|
| T |
4337114 |
ccatatttgataccactctctgccactcctcattttcgaaggacgataatgcctctctcttaaagagttgaatggtggtctttgtgtgatttatcaccaa |
4337015 |
T |
|
| Q |
101 |
cacatttttaaggccatatgaagttatgttattttgggttgaagtatagataatgcacatcattgtcttcaagttacgcccttccaccagagggacatga |
200 |
Q |
| |
|
|||||||| |||||||| ||| ||||||| |||| || |||||| ||||| |||||||||||||||||||||| |||| |||||||| ||||||| | | |
|
|
| T |
4337014 |
cacattttgaaggccatctgatgttatgtcatttgggcttgaagaatagacaatgcacatcattgtcttcaagctacgtccttccacatgagggacttca |
4336915 |
T |
|
| Q |
201 |
aaagttacagaagaaccttcagagtagaaggttaaccaatttgg |
244 |
Q |
| |
|
||| |||||||| |||||| |||| ||| | |||||||||||| |
|
|
| T |
4336914 |
aaatttacagaataacctttcgagttgaaagctaaccaatttgg |
4336871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 4319385 - 4319646
Alignment:
| Q |
1 |
ccatacttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaa |
100 |
Q |
| |
|
||||| ||| ||| |||||||||| |||||||| ||||||||| |||||| ||||||||||| || |||||||| | |||||||| |||| | || || |
|
|
| T |
4319385 |
ccatatttgttacaactctctgccactcctcattttcaaaggaggataatgcttctctcttatagagttgaatggtggtctttgtgtgatttatcactaa |
4319484 |
T |
|
| Q |
101 |
cacatttttaaggccatatgaagttatgttattttgggttgaagtatagataatgcacatcattgtcttcaagttacgcccttccaccagagggacatga |
200 |
Q |
| |
|
|||||||| |||||||| ||| ||||||| | | || |||||| ||||| ||||||||| |||||||||||| |||| |||||||| ||||||| | | |
|
|
| T |
4319485 |
cacattttcaaggccatctgatgttatgtcgtatgggcttgaagaatagacaatgcacattattgtcttcaagctacgtccttccacttgagggacttca |
4319584 |
T |
|
| Q |
201 |
aaagttacagaagaaccttcagagtagaaggttaaccaatttggataactatcaccagggag |
262 |
Q |
| |
|
||| |||||||||||||||| || | ||| | |||||||| || ||| |||||| |||||| |
|
|
| T |
4319585 |
aaaattacagaagaaccttctgaattgaaagctaaccaatccgggtaattatcacaagggag |
4319646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 282
Target Start/End: Complemental strand, 4362764 - 4362483
Alignment:
| Q |
1 |
ccatacttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaa |
100 |
Q |
| |
|
||||| |||||| |||||||||| ||| ||| ||| ||||| ||| |||||||||||||| || |||||||| | |||||||| |||| | ||||| |
|
|
| T |
4362764 |
ccatatttgatatcactctctgccagtccgcattttcgaaggacgataacgcctctctcttatagagttgaatggtggtctttgtgtgatttatcaccaa |
4362665 |
T |
|
| Q |
101 |
cacatttttaaggccatatgaagttatgttattttgggttgaagtatagataatgcacatcattgtcttcaagttacgcccttccaccagagggacatga |
200 |
Q |
| |
|
||||||| ||||||||| ||| ||||||| || | || |||||| ||||| ||||||||| |||||||||||| ||| |||||||| ||||||| | | |
|
|
| T |
4362664 |
cacatttctaaggccatctgatgttatgtcatatgggcttgaagaatagacaatgcacattattgtcttcaagctacatccttccacttgagggacttca |
4362565 |
T |
|
| Q |
201 |
aaagttacagaagaaccttcagagtagaaggttaaccaatttggataactatcaccagggaggaaacaaccaccactcccat |
282 |
Q |
| |
|
||| |||||||| |||||| | || ||| ||||||||||||| ||| |||||||||||| ||| ||| ||||| ||||| |
|
|
| T |
4362564 |
aaaattacagaataacctttggcgttgaaacttaaccaatttgggtaatcatcaccagggagcaaaaaactaccacgcccat |
4362483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 4122727 - 4122981
Alignment:
| Q |
1 |
ccatacttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaa |
100 |
Q |
| |
|
||||| ||||||| ||||||| || ||||||| ||| ||||| ||| |||||||||||||| || |||||||| | |||||||| |||| | ||||| |
|
|
| T |
4122727 |
ccatatttgataccactctcttccattcctcattttctaaggaggataacgcctctctcttatagagttgaatggtggtctttgtgtgatttatcaccaa |
4122826 |
T |
|
| Q |
101 |
cacatttttaaggccatatgaagttatgttattttgggttgaagtatagataatgcacatcattgtcttcaagttacgcccttccaccagagggacatga |
200 |
Q |
| |
|
|||||||| ||||||| ||| | |||| |||| || |||| | ||||| |||||||||||||||||||||| |||| |||||||| ||||||| | | |
|
|
| T |
4122827 |
cacattttgaaggccaactgatgctatgccatttgggcttgatgaatagacaatgcacatcattgtcttcaagctacgtccttccacttgagggacttca |
4122926 |
T |
|
| Q |
201 |
aaagttacagaagaaccttcagagtagaaggttaaccaatttggataactatcac |
255 |
Q |
| |
|
||| |||||| |||||| |||| ||| ||||||||||||| ||| |||||| |
|
|
| T |
4122927 |
aaaacaacagaataacctttggagttgaaacttaaccaatttgggtaattatcac |
4122981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 3 - 254
Target Start/End: Complemental strand, 25569050 - 25568793
Alignment:
| Q |
3 |
atacttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaaca |
102 |
Q |
| |
|
||||||||||||||| | ||||||||||| | ||||||||||| ||||||||||||||| || | ||||||||| | ||| ||||||||||| |||| | |
|
|
| T |
25569050 |
atacttgatactactatatgcccctcctcgttttcaaaggaaactaatgcctctctcttgtagacctgaatggtggacttggtgtaatttttcaccatga |
25568951 |
T |
|
| Q |
103 |
catttttaaggcc------atatgaagttatgttattttgggttgaagtatagataatgcacatcattgtcttcaagttacgcccttccaccagagggac |
196 |
Q |
| |
|
|||||| |||||| |||||| | ||||||| | ||| ||| || | |||||| |||||||| |||||| |||||||||||| |||| || |
|
|
| T |
25568950 |
cattttgaaggccatctgaatatgatgctatgttagcataggtccaagaatcaacaatgcaaatcattgttttcaagacacgcccttccactcgaggtac |
25568851 |
T |
|
| Q |
197 |
atgaaaagttacagaagaaccttcagagtagaaggttaaccaatttggataactatca |
254 |
Q |
| |
|
| |||| |||| |||||||||||| ||| ||||| ||||||||||||||| ||||| |
|
|
| T |
25568850 |
ttcaaaaattactgaagaaccttcactgtacaaggtcaaccaatttggataattatca |
25568793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 4132698 - 4132814
Alignment:
| Q |
1 |
ccatacttgatactactctctgcccctcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaa |
100 |
Q |
| |
|
||||| |||||||||||||||||| |||||||| ||||||||| ||||||||||||||||| ||||||||||||| ||| |||| |||| | ||||| |
|
|
| T |
4132698 |
ccatatttgatactactctctgccactcctcattttcaaaggaggcgaatgcctctctcttatagagctgaatggtagtcttcgtgtgatttatcaccaa |
4132797 |
T |
|
| Q |
101 |
cacatttttaaggccat |
117 |
Q |
| |
|
||||||||| ||||||| |
|
|
| T |
4132798 |
cacattttttaggccat |
4132814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 51 - 282
Target Start/End: Complemental strand, 4346525 - 4346287
Alignment:
| Q |
51 |
gcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaacacatttttaaggccatatgaagt-------tatgttattttgggttgaa |
143 |
Q |
| |
|
|||||||||||||| || |||||||| | |||||||| |||| | |||||||||||||||||||||| ||| || ||||| || | || ||||| |
|
|
| T |
4346525 |
gcctctctcttatagagttgaatggtggtctttgtgtgatttatcaccaacacatttttaaggccatctgatgtctgatgttatgtcatctgggcttgaa |
4346426 |
T |
|
| Q |
144 |
gtatagataatgcacatcattgtcttcaagttacgcccttccaccagagggacatgaaaagttacagaagaaccttcagagtagaaggttaaccaatttg |
243 |
Q |
| |
|
| ||||| ||||||||| |||||||||||| || | |||||||| ||||||| | ||| |||||||| |||||| |||| ||| ||| ||||||||| |
|
|
| T |
4346425 |
gaatagacaatgcacattattgtcttcaagctatgtccttccacttgagggacttcaaagattacagaataacctttggagttgaaagttgaccaatttg |
4346326 |
T |
|
| Q |
244 |
gataactatcaccagggaggaaacaaccaccactcccat |
282 |
Q |
| |
|
| ||| ||||||| ||||| ||| ||| ||||| ||||| |
|
|
| T |
4346325 |
ggtaattatcaccggggagcaaaaaactaccacgcccat |
4346287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 27 - 276
Target Start/End: Original strand, 7986 - 8232
Alignment:
| Q |
27 |
tcctcatcttcaaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaacacatttttaaggccatatgaagtta |
126 |
Q |
| |
|
|||||||| | ||||||| ||||| || |||||||| | ||||||||| ||||||||||||||||| || |||||||||||||| |||| || |||| |
|
|
| T |
7986 |
tcctcatccttaaaggaagctaatgtttcactcttatagatctgaatggtggcctttgtgtaatttttcactaacacatttttaagaccatctggtgtta |
8085 |
T |
|
| Q |
127 |
tgttattttgggttgaagtatagataatgcacatcattgtcttcaagttacgcccttccaccagagggacatgaaaagttacagaagaaccttcagagta |
226 |
Q |
| |
|
|||||| ||||||| || ||||||||||| || ||| |||||| || ||||||| ||||| ||| |||| ||||||||||||| ||| | | |
|
|
| T |
8086 |
tgttatccgcagttgaag---aggcaatgcacatcaatgactttaagttatgctcttccacttgaggggcattaaaaattacagaagaaccatcacaatt |
8182 |
T |
|
| Q |
227 |
gaaggttaaccaatttggataactatcaccagggaggaaacaaccaccac |
276 |
Q |
| |
|
|||| ||||||| ||||||||||||||||| ||||| | ||||||||||| |
|
|
| T |
8183 |
gaagcttaaccagtttggataactatcacccgggagaacacaaccaccac |
8232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 272
Target Start/End: Original strand, 22583419 - 22583644
Alignment:
| Q |
50 |
tgcctctctcttataaagctgaatggtagcctttgtgtaattttttaccaacacatttttaaggccatatgaagttatgttattttgggttgaagtatag |
149 |
Q |
| |
|
|||| ||||||| || | ||||||||| |||||||| | |||||| ||||||| | || |||||| || ||||||||| ||||||||| |||| |
|
|
| T |
22583419 |
tgcccctctcttgtagaactgaatggtggcctttgtatgatttttcaccaacaaggctgtagggccatcggatcttatgttatccggggttgaagaatag |
22583518 |
T |
|
| Q |
150 |
ataatgcacatcattgt---cttcaagttacgcccttccaccagagggacatgaaaagttacagaagaaccttcagagtagaaggttaaccaatttggat |
246 |
Q |
| |
|
| |||||| |||||| | |||||| ||||||||| ||| | |||||| | |||||||||||||||||||| | | |||| ||||||||||||||| |
|
|
| T |
22583519 |
acaatgcagatcattattgacttcaacatacgccctttcactacagggactttaaaagttacagaagaaccttggcaattgaagtttaaccaatttggat |
22583618 |
T |
|
| Q |
247 |
aactatcaccagggaggaaacaacca |
272 |
Q |
| |
|
|| |||||||||| || ||||||||| |
|
|
| T |
22583619 |
aattatcaccaggaagcaaacaacca |
22583644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 82 - 256
Target Start/End: Complemental strand, 8879660 - 8879486
Alignment:
| Q |
82 |
ttgtgtaattttttaccaacacatttttaaggccatatgaagttatgttattttgggttgaagtatagataatgcacatcattgtcttcaagttacgccc |
181 |
Q |
| |
|
|||||| |||| | ||||||| |||||| || |||| ||| || |||||| | ||||||| ||||||| |||||||||||| | ||||||||| | ||| |
|
|
| T |
8879660 |
ttgtgtgatttataaccaacatattttttagtccatctgatattgtgttatctggggttgatgtatagacaatgcacatcatcgacttcaagtttctccc |
8879561 |
T |
|
| Q |
182 |
ttccaccagagggacatgaaaagttacagaagaaccttcagagtagaaggttaaccaatttggataactatcacc |
256 |
Q |
| |
|
||| || |||| || | |||||||||| ||| ||||||| | ||| |||||||||||||||||| ||||||| |
|
|
| T |
8879560 |
ttcaacttgaggaactttaaaagttacacaaggaccttcacaactgaaagttaaccaatttggataattatcacc |
8879486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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