View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17534_low_2 (Length: 455)

Name: NF17534_low_2
Description: NF17534
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17534_low_2
NF17534_low_2
[»] chr5 (50 HSPs)
chr5 (72-452)||(38392837-38393218)
chr5 (201-399)||(38384051-38384249)
chr5 (201-408)||(38401480-38401682)
chr5 (1-71)||(6532577-6532647)
chr5 (1-70)||(1662032-1662101)
chr5 (1-70)||(34302645-34302714)
chr5 (1-69)||(42917117-42917185)
chr5 (1-69)||(43237691-43237759)
chr5 (1-68)||(3056386-3056453)
chr5 (1-70)||(2141241-2141310)
chr5 (1-70)||(2413926-2413995)
chr5 (1-69)||(9534870-9534938)
chr5 (1-60)||(13410551-13410610)
chr5 (1-63)||(6560832-6560894)
chr5 (1-63)||(21605654-21605716)
chr5 (1-70)||(6114112-6114181)
chr5 (1-70)||(18228797-18228866)
chr5 (112-204)||(38401731-38401828)
chr5 (1-63)||(13090920-13090982)
chr5 (1-69)||(2029353-2029421)
chr5 (1-68)||(19189107-19189174)
chr5 (1-63)||(31587999-31588061)
chr5 (1-70)||(4618050-4618119)
chr5 (1-70)||(9589208-9589277)
chr5 (7-60)||(23408261-23408314)
chr5 (4-63)||(24097877-24097936)
chr5 (88-202)||(38393994-38394107)
chr5 (1-59)||(35817686-35817744)
chr5 (1-69)||(12362696-12362764)
chr5 (21-69)||(14746910-14746958)
chr5 (4-60)||(32467052-32467108)
chr5 (1-57)||(36752548-36752604)
chr5 (21-76)||(19238787-19238842)
chr5 (1-60)||(27116471-27116530)
chr5 (20-63)||(33145217-33145260)
chr5 (1-60)||(35162360-35162419)
chr5 (1-63)||(3425415-3425477)
chr5 (1-63)||(14967238-14967300)
chr5 (1-69)||(28332120-28332189)
chr5 (1-57)||(38355054-38355111)
chr5 (1-70)||(41802105-41802174)
chr5 (10-70)||(2021680-2021740)
chr5 (21-69)||(6335390-6335438)
chr5 (7-55)||(14096748-14096796)
chr5 (21-69)||(16602721-16602769)
chr5 (1-69)||(21051642-21051710)
chr5 (1-69)||(29996510-29996578)
chr5 (10-70)||(34902001-34902061)
chr5 (1-45)||(35682121-35682165)
chr5 (21-69)||(36409906-36409954)
[»] chr3 (51 HSPs)
chr3 (205-408)||(37843685-37843888)
chr3 (201-408)||(37838100-37838310)
chr3 (1-72)||(29786935-29787006)
chr3 (1-71)||(27079717-27079787)
chr3 (1-71)||(27082684-27082754)
chr3 (1-71)||(35171531-35171601)
chr3 (1-71)||(42067577-42067647)
chr3 (1-71)||(11140245-11140315)
chr3 (1-71)||(44365619-44365689)
chr3 (1-70)||(40650066-40650135)
chr3 (1-69)||(42364265-42364333)
chr3 (1-69)||(42848544-42848614)
chr3 (1-63)||(29347598-29347660)
chr3 (1-71)||(31308875-31308945)
chr3 (1-63)||(46959560-46959622)
chr3 (1-70)||(876560-876629)
chr3 (7-71)||(379221-379285)
chr3 (1-69)||(38785420-38785488)
chr3 (1-69)||(44670596-44670664)
chr3 (1-69)||(45636089-45636157)
chr3 (1-69)||(47948733-47948801)
chr3 (1-70)||(4663476-4663545)
chr3 (1-76)||(4392973-4393048)
chr3 (1-71)||(39630228-39630299)
chr3 (3-77)||(6890422-6890496)
chr3 (102-200)||(37843546-37843646)
chr3 (1-60)||(31479565-31479624)
chr3 (1-63)||(7671809-7671871)
chr3 (1-71)||(27647476-27647546)
chr3 (1-63)||(39540677-39540738)
chr3 (5-71)||(47470426-47470492)
chr3 (1-63)||(52776791-52776853)
chr3 (1-76)||(26885309-26885385)
chr3 (1-69)||(43715086-43715154)
chr3 (1-60)||(37627264-37627323)
chr3 (1-71)||(21289151-21289221)
chr3 (21-71)||(36790245-36790295)
chr3 (21-71)||(44568581-44568631)
chr3 (1-63)||(51996756-51996818)
chr3 (21-70)||(4521627-4521676)
chr3 (1-69)||(8965915-8965984)
chr3 (8-57)||(15298580-15298629)
chr3 (34-71)||(15804256-15804293)
chr3 (1-69)||(16136960-16137029)
chr3 (4-69)||(25592347-25592412)
chr3 (1-69)||(40021079-40021148)
chr3 (1-68)||(15996821-15996889)
chr3 (1-69)||(19547489-19547557)
chr3 (1-45)||(34593717-34593761)
chr3 (1-69)||(35375871-35375939)
chr3 (1-69)||(53516919-53516987)
[»] chr8 (50 HSPs)
chr8 (1-71)||(14498641-14498711)
chr8 (1-75)||(29773439-29773513)
chr8 (1-70)||(38502183-38502252)
chr8 (2-70)||(29229516-29229584)
chr8 (1-69)||(37161504-37161572)
chr8 (1-71)||(36002354-36002424)
chr8 (1-63)||(44934905-44934967)
chr8 (1-71)||(15726228-15726298)
chr8 (1-70)||(23286564-23286633)
chr8 (1-70)||(37511087-37511156)
chr8 (1-69)||(28090192-28090260)
chr8 (1-69)||(29459633-29459701)
chr8 (1-69)||(34332112-34332180)
chr8 (1-63)||(12163281-12163343)
chr8 (1-63)||(12407709-12407771)
chr8 (1-71)||(945974-946044)
chr8 (1-54)||(10280575-10280628)
chr8 (1-70)||(27970011-27970080)
chr8 (8-69)||(34047762-34047823)
chr8 (1-69)||(2273010-2273078)
chr8 (1-62)||(12179928-12179990)
chr8 (1-62)||(12424356-12424418)
chr8 (1-71)||(19718689-19718759)
chr8 (1-71)||(42444556-42444626)
chr8 (1-70)||(16323558-16323627)
chr8 (1-70)||(17642073-17642142)
chr8 (1-70)||(23274621-23274690)
chr8 (1-69)||(37465684-37465752)
chr8 (1-69)||(43485379-43485447)
chr8 (21-71)||(17096639-17096689)
chr8 (1-70)||(6800110-6800179)
chr8 (1-70)||(39347468-39347537)
chr8 (1-70)||(42165242-42165311)
chr8 (8-69)||(43049537-43049598)
chr8 (1-70)||(43331743-43331811)
chr8 (1-70)||(44309565-44309633)
chr8 (1-69)||(4475046-4475113)
chr8 (20-71)||(12801105-12801156)
chr8 (1-68)||(35754795-35754862)
chr8 (1-63)||(40776956-40777019)
chr8 (34-71)||(12633277-12633314)
chr8 (1-70)||(13483234-13483303)
chr8 (21-70)||(40154488-40154537)
chr8 (1-69)||(529267-529335)
chr8 (8-72)||(2666502-2666566)
chr8 (21-69)||(17069592-17069640)
chr8 (21-69)||(17578633-17578681)
chr8 (21-69)||(29604372-29604420)
chr8 (1-69)||(30777612-30777680)
chr8 (1-69)||(39721970-39722038)
[»] chr4 (48 HSPs)
chr4 (1-70)||(34280567-34280636)
chr4 (1-70)||(43137703-43137772)
chr4 (1-69)||(27538915-27538983)
chr4 (1-69)||(51436152-51436220)
chr4 (1-69)||(30539569-30539637)
chr4 (1-63)||(38835858-38835920)
chr4 (1-67)||(52589073-52589139)
chr4 (1-69)||(28037685-28037753)
chr4 (1-69)||(41759999-41760067)
chr4 (1-71)||(14802710-14802780)
chr4 (1-69)||(3716325-3716393)
chr4 (1-71)||(52809282-52809352)
chr4 (1-69)||(30342825-30342893)
chr4 (1-69)||(48579247-48579315)
chr4 (1-60)||(36592373-36592432)
chr4 (1-71)||(46041699-46041769)
chr4 (1-70)||(37855120-37855189)
chr4 (1-69)||(18425456-18425524)
chr4 (10-70)||(47302028-47302088)
chr4 (1-76)||(18052277-18052352)
chr4 (1-71)||(31908441-31908511)
chr4 (1-69)||(52940480-52940548)
chr4 (1-69)||(53389185-53389253)
chr4 (2-70)||(55722475-55722543)
chr4 (4-70)||(48066346-48066412)
chr4 (1-70)||(1414437-1414506)
chr4 (1-70)||(9858243-9858312)
chr4 (1-70)||(19842437-19842506)
chr4 (1-70)||(29646623-29646692)
chr4 (2-71)||(31681335-31681404)
chr4 (1-70)||(36091058-36091127)
chr4 (26-71)||(46216135-46216180)
chr4 (19-63)||(46004680-46004724)
chr4 (1-75)||(9356720-9356795)
chr4 (1-60)||(37992020-37992079)
chr4 (20-70)||(12756001-12756051)
chr4 (1-71)||(32737527-32737597)
chr4 (1-63)||(39162143-39162205)
chr4 (1-70)||(56361651-56361718)
chr4 (1-70)||(6807332-6807401)
chr4 (7-56)||(9381046-9381095)
chr4 (1-50)||(9580004-9580053)
chr4 (1-50)||(9585699-9585748)
chr4 (28-69)||(30891453-30891494)
chr4 (1-69)||(38975277-38975343)
chr4 (1-70)||(52324305-52324374)
chr4 (21-69)||(17370634-17370682)
chr4 (21-69)||(48207078-48207126)
[»] chr1 (54 HSPs)
chr1 (1-70)||(35305150-35305219)
chr1 (1-70)||(51519781-51519850)
chr1 (1-69)||(39190895-39190963)
chr1 (1-72)||(52303010-52303081)
chr1 (1-71)||(31931036-31931106)
chr1 (1-69)||(922180-922248)
chr1 (1-69)||(37498744-37498812)
chr1 (1-69)||(50905581-50905649)
chr1 (1-71)||(38262472-38262542)
chr1 (1-71)||(46771070-46771140)
chr1 (1-70)||(45423608-45423677)
chr1 (1-69)||(18641888-18641956)
chr1 (1-69)||(27295058-27295126)
chr1 (1-71)||(41073268-41073338)
chr1 (1-63)||(51781442-51781504)
chr1 (1-63)||(51984940-51985002)
chr1 (1-70)||(16482575-16482644)
chr1 (1-70)||(34256452-34256521)
chr1 (1-69)||(8461864-8461932)
chr1 (1-69)||(23459896-23459964)
chr1 (1-69)||(39971607-39971675)
chr1 (1-60)||(6520323-6520382)
chr1 (1-70)||(28493809-28493878)
chr1 (1-69)||(5956865-5956933)
chr1 (1-69)||(44978869-44978937)
chr1 (12-63)||(45673333-45673384)
chr1 (1-63)||(51184048-51184110)
chr1 (1-60)||(11778974-11779033)
chr1 (1-63)||(2247073-2247135)
chr1 (1-71)||(9166871-9166941)
chr1 (1-63)||(26102811-26102873)
chr1 (1-63)||(43146425-43146487)
chr1 (12-69)||(51369329-51369386)
chr1 (1-69)||(7121957-7122025)
chr1 (1-69)||(42317163-42317231)
chr1 (1-69)||(48616785-48616853)
chr1 (1-60)||(23056774-23056833)
chr1 (1-67)||(29106702-29106771)
chr1 (1-70)||(33081987-33082055)
chr1 (1-70)||(33098993-33099062)
chr1 (1-69)||(632986-633054)
chr1 (1-69)||(26424179-26424247)
chr1 (1-76)||(34038502-34038578)
chr1 (1-71)||(32145006-32145077)
chr1 (24-71)||(35912993-35913040)
chr1 (1-68)||(44246336-44246403)
chr1 (1-76)||(45317929-45318004)
chr1 (1-63)||(27352853-27352915)
chr1 (1-70)||(35874276-35874346)
chr1 (21-70)||(5360560-5360609)
chr1 (1-62)||(23304414-23304475)
chr1 (1-69)||(26308540-26308609)
chr1 (1-69)||(12227121-12227189)
chr1 (19-75)||(31890426-31890482)
[»] chr2 (35 HSPs)
chr2 (1-77)||(4673940-4674016)
chr2 (1-69)||(42427909-42427977)
chr2 (1-63)||(6884165-6884227)
chr2 (1-63)||(11813535-11813597)
chr2 (1-62)||(58927-58988)
chr2 (1-63)||(34665577-34665639)
chr2 (1-70)||(14533160-14533229)
chr2 (1-70)||(38963402-38963471)
chr2 (1-69)||(5091997-5092065)
chr2 (1-69)||(11227627-11227695)
chr2 (1-63)||(5389539-5389601)
chr2 (1-63)||(12071161-12071223)
chr2 (1-69)||(3383525-3383593)
chr2 (12-68)||(42046076-42046132)
chr2 (12-71)||(1353505-1353564)
chr2 (1-60)||(37083217-37083276)
chr2 (1-63)||(8371904-8371966)
chr2 (1-70)||(8362744-8362813)
chr2 (1-70)||(11088215-11088284)
chr2 (1-69)||(12547364-12547432)
chr2 (2-69)||(32499150-32499217)
chr2 (1-59)||(5420237-5420295)
chr2 (1-71)||(6513602-6513672)
chr2 (28-69)||(7467120-7467161)
chr2 (10-63)||(33423363-33423416)
chr2 (1-69)||(34438524-34438592)
chr2 (1-60)||(8504366-8504424)
chr2 (1-56)||(15426361-15426416)
chr2 (1-78)||(30980871-30980949)
chr2 (1-63)||(36489364-36489426)
chr2 (10-63)||(5615381-5615434)
chr2 (4-69)||(15771651-15771716)
chr2 (1-70)||(25332969-25333038)
chr2 (1-69)||(6438513-6438580)
chr2 (26-70)||(20212516-20212560)
[»] chr7 (33 HSPs)
chr7 (1-71)||(30862787-30862857)
chr7 (1-70)||(30624061-30624130)
chr7 (1-69)||(3909928-3909996)
chr7 (1-69)||(38129723-38129791)
chr7 (1-63)||(1691329-1691391)
chr7 (1-63)||(21699627-21699689)
chr7 (1-71)||(41913432-41913502)
chr7 (1-69)||(41331729-41331797)
chr7 (1-71)||(41381495-41381565)
chr7 (1-60)||(31903423-31903482)
chr7 (6-69)||(45458698-45458761)
chr7 (1-71)||(1343017-1343087)
chr7 (1-63)||(28326687-28326749)
chr7 (1-63)||(40941881-40941943)
chr7 (1-71)||(42710929-42710999)
chr7 (1-71)||(45857812-45857882)
chr7 (1-69)||(18990091-18990159)
chr7 (10-70)||(23331699-23331759)
chr7 (1-69)||(27956377-27956446)
chr7 (1-69)||(11485996-11486064)
chr7 (1-69)||(44964159-44964227)
chr7 (1-63)||(31482380-31482442)
chr7 (1-69)||(42974895-42974963)
chr7 (6-70)||(43069079-43069143)
chr7 (1-69)||(43750075-43750143)
chr7 (1-63)||(2290796-2290859)
chr7 (1-44)||(7527072-7527115)
chr7 (1-60)||(47748140-47748199)
chr7 (1-63)||(13806284-13806346)
chr7 (19-69)||(29689281-29689331)
chr7 (1-63)||(30936430-30936492)
chr7 (1-70)||(41311053-41311121)
chr7 (21-69)||(11640295-11640343)
[»] chr6 (21 HSPs)
chr6 (1-63)||(17545611-17545673)
chr6 (1-71)||(26358891-26358961)
chr6 (1-70)||(13390384-13390453)
chr6 (1-63)||(2258909-2258971)
chr6 (1-76)||(4110544-4110619)
chr6 (1-59)||(24487625-24487683)
chr6 (1-70)||(24212911-24212980)
chr6 (1-69)||(6848510-6848578)
chr6 (1-60)||(4901287-4901346)
chr6 (4-71)||(32834115-32834182)
chr6 (7-69)||(10888154-10888216)
chr6 (1-69)||(7344654-7344722)
chr6 (1-70)||(1096220-1096289)
chr6 (1-70)||(8401754-8401823)
chr6 (1-69)||(11446736-11446804)
chr6 (8-69)||(26315447-26315508)
chr6 (20-71)||(1705604-1705655)
chr6 (1-63)||(6975038-6975100)
chr6 (1-71)||(15383542-15383612)
chr6 (20-70)||(21181138-21181188)
chr6 (1-71)||(34196147-34196217)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-71)||(36947-37017)
[»] scaffold0625 (1 HSPs)
scaffold0625 (1-69)||(6601-6669)
[»] scaffold0077 (1 HSPs)
scaffold0077 (1-46)||(48033-48078)
[»] scaffold0060 (1 HSPs)
scaffold0060 (2-71)||(45759-45829)
[»] scaffold0604 (1 HSPs)
scaffold0604 (1-63)||(2026-2088)
[»] scaffold0325 (1 HSPs)
scaffold0325 (1-63)||(1552-1613)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-59)||(29255-29313)
[»] scaffold0001 (1 HSPs)
scaffold0001 (28-70)||(404684-404726)


Alignment Details
Target: chr5 (Bit Score: 338; Significance: 0; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 72 - 452
Target Start/End: Complemental strand, 38393218 - 38392837
Alignment:
72 gttttatgctagttttgttttt-aaggatcctatacgctagtttattaatcatacaagaagtttttcaagttagtcgaactggtcaaaggacaactcatt 170  Q
    |||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
38393218 gttttatgctagtttttttttttaaggatcctatacgatagtttattaatcatacaagaagtttttcaagttagtcgaactggtcaaaggacaactcatt 38393119  T
171 catttattcccctctctctcattgtctaattatagcattgtatggtctaaatttgtaataaacatgttatgtttcacaggtgttacaaaaatatcaacaa 270  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
38393118 catttattcccctctctctcattgtccaattatagcattgtatggtctaaatttgtaataaacatgttatgttttacaggtgttacaaaaatatcaacaa 38393019  T
271 ccttgccaactttattacttatatgatcatgtttaaaattaagttaattagctatttaccttgtcagttacaccgaagcacaccttcatgactaaaatga 370  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
38393018 ccttgccaactttattacttatatgatcatgtttaaaattaagttgcttagctatttaccttgtcggttacaccgaagcactccttcatgactaaaatga 38392919  T
371 aaattattcatgctcatagacaatataaattcaaccactccttcatgcatcctctaacttgttattttctttcttctctctc 452  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
38392918 aaattattcatgctcatagacaatataaattcaaccactccttcatgcatcctctaacttgttattttctttcttttctctc 38392837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 201 - 399
Target Start/End: Complemental strand, 38384249 - 38384051
Alignment:
201 tatagcattgtatggtctaaatttgtaataaacatgttatgtttcacaggtgttacaaaaatatcaacaaccttgccaactttattacttatatgatcat 300  Q
    |||||||||||| |||||||| | |||||||||||||| ||||||||||||||||||||||| ||||||| | ||||||||| |||||||| |  |||||    
38384249 tatagcattgtacggtctaaactagtaataaacatgttttgtttcacaggtgttacaaaaatgtcaacaatcatgccaacttaattacttaaacaatcat 38384150  T
301 gtttaaaattaagttaattagctatttaccttgtcagttacaccgaagcacaccttcatgactaaaatgaaaattattcatgctcatagacaatataaa 399  Q
    |||||||||| || |  |||||||||||||||||| |||||||| |||||| |||||||||||| |||||||||||||||| |||||||||||||||||    
38384149 gtttaaaatttaggtgcttagctatttaccttgtcggttacaccaaagcactccttcatgactataatgaaaattattcatcctcatagacaatataaa 38384051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 201 - 408
Target Start/End: Complemental strand, 38401682 - 38401480
Alignment:
201 tatagcattgtatggtctaaatttgtaataaacatgttatgtttcacaggtgttacaaaaatatcaacaaccttgccaactttattacttatatgatcat 300  Q
    |||||||||||| |||||||| | |||||||||||||| ||| ||||| |||||||||||||      |||||||||||||| ||| |||| | | ||||    
38401682 tatagcattgtacggtctaaactagtaataaacatgttttgtgtcacatgtgttacaaaaatg-----aaccttgccaacttaattgcttaaacggtcat 38401588  T
301 gtttaaaattaagttaattagctatttaccttgtcagttacaccgaagcacaccttcatgactaaaatgaaaattattcatgctcatagacaatataaat 400  Q
    |||||||||| ||||  ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
38401587 gtttaaaatttagtttcttaactatttaccttgtcagttacaccgaagcacaccttcatgactataatgaaaattattcatcctcatagacaatataaat 38401488  T
401 tcaaccac 408  Q
    ||||||||    
38401487 tcaaccac 38401480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 6532647 - 6532577
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||    
6532647 tttaactattaatttaagaatttggtgtaccaatacacttaaattgttgggtgtaccatagaatttgccta 6532577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 1662032 - 1662101
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||    
1662032 tttaactattaatttaaggattttgtgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 1662101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 34302714 - 34302645
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||    
34302714 tttaactattaatttaaggatttgatgtaccaatacactcaaattattgggtgtaccatagaatttgcct 34302645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 42917185 - 42917117
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||    
42917185 tttaactattaatttaagaatttggtgtaccaatacactcaaattgttgggtgcaccatagaatttgcc 42917117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 43237691 - 43237759
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||    
43237691 tttaactattaatttaagaatttggtgtaccaatacactcaaattattgggtgtaccatagaatttgcc 43237759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 3056453 - 3056386
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgc 68  Q
    ||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||    
3056453 tttaactattaatttaaaaatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgc 3056386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 2141310 - 2141241
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||| |||||||||    
2141310 tttaactattaatttaagaatttggtgtaccaatacactcaaattattgggtctaccataaaacttgcct 2141241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 2413995 - 2413926
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||| || |||||||||||||||||    
2413995 tttaactattaatttaagaatttggtgtaccaatacactcaaattattgagtctaccatagaacttgcct 2413926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 9534938 - 9534870
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||| || ||||||||||||||||    
9534938 tttaactattaatttaagaatttggtgtaccaatacactcaaattattgagtctaccatagaacttgcc 9534870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 13410610 - 13410551
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccata 60  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
13410610 tttaactattaatttaagaatttggtgtaccaatacactcaaattgttggatgtaccata 13410551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 6560894 - 6560832
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||    
6560894 tttaactattaatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatagaa 6560832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 21605716 - 21605654
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    |||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||    
21605716 tttaactattaatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccatagaa 21605654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 6114112 - 6114181
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||| ||||| || |||||||||||||||||||||| |||||||||||| ||||||    
6114112 tttaactattaatttaaggatttggtggaccaatacactcaaattgttggatgtaccatagaatttgcct 6114181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 18228797 - 18228866
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||| ||||| | ||||||||||||||||||||| ||||||||||||||| |||||    
18228797 tttaactattaatttaaggatttggtataccaatacactcaaattgttaggtgtaccatagaacgtgcct 18228866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 112 - 204
Target Start/End: Complemental strand, 38401828 - 38401731
Alignment:
112 tttattaatcatacaagaagtttttcaagttagtcgaactggtcaaaggacaactcattcatttattccc-----ctctctctcattgtctaattata 204  Q
    |||||| ||| ||||| |||||||||||||||||||||| |||||||||||||||||||| ||||  |||     |||||||||||||||||||||||    
38401828 tttattgatcttacaataagtttttcaagttagtcgaaccggtcaaaggacaactcattcctttaccccctacatctctctctcattgtctaattata 38401731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 13090982 - 13090920
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    ||||||||||||||||| |||||| |||||||||||||||| ||  |||||||||||||||||    
13090982 tttaactattaatttaataatttggtgtaccaatacactcatatctttgggtgtaccatagaa 13090920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 2029421 - 2029353
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||| ||||| |||||||||||||| |||||||| | |||||||| ||| |||||    
2029421 tttaactattaatttaaggatttggtgtaccaatacacttaaattgttagatgtaccatggaatttgcc 2029353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 19189174 - 19189107
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgc 68  Q
    ||||| ||||||||||| |||||  ||||||  |||||||||||||||||||||||||||||| ||||    
19189174 tttaattattaatttaataatttagtgtaccggtacactcaaattgttgggtgtaccatagaatttgc 19189107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 31588061 - 31587999
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    ||||| ||||||||||| |||||| ||||||| |||||||||||| || ||||||||||||||    
31588061 tttaattattaatttaataatttggtgtaccagtacactcaaatttttaggtgtaccatagaa 31587999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 4618050 - 4618119
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    ||||||||||||||||   ||||| |||||||||||||||||||| || ||||||||||| || ||||||    
4618050 tttaactattaatttattgatttggtgtaccaatacactcaaatttttaggtgtaccataaaatttgcct 4618119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 9589277 - 9589208
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||  ||||| ||| |||||||||||| ||  ||||||||||||||||| ||||||    
9589277 tttaactattaatttaatgatttggtgtgccaatacactcatatctttgggtgtaccatagaatttgcct 9589208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 23408314 - 23408261
Alignment:
7 tattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccata 60  Q
    ||||||||||| |||||| ||||||  |||||||||||||||||||||||||||    
23408314 tattaatttaataatttggtgtaccggtacactcaaattgttgggtgtaccata 23408261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 24097936 - 24097877
Alignment:
4 aactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    |||||||||||||| |||||| ||||||| |||||||||||  |||||| ||||||||||    
24097936 aactattaatttaataatttggtgtaccattacactcaaatgattgggtttaccatagaa 24097877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 202
Target Start/End: Complemental strand, 38394107 - 38393994
Alignment:
88 gtttttaaggatcctatacgctagtttattaatcatacaagaagtttttcaagttagtcgaactggtcaaaggacaactcattcatttattccc--ctct 185  Q
    |||||||||||| ||||| |||||||||||  || ||||| ||||||| |||||||||| ||  ||||||| || ||    |||||||||||||   |||    
38394107 gtttttaaggatgctatatgctagtttattggtcttacaataagttttccaagttagtcaaagcggtcaaaagataa---tttcatttattcccttatct 38394011  T
186 ctctcattgtctaatta 202  Q
    |||||||||||||||||    
38394010 ctctcattgtctaatta 38393994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 35817686 - 35817744
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccat 59  Q
    ||||||||||||||||| | |||| |||| ||||||||||||||| |||| ||||||||    
35817686 tttaactattaatttaaaattttggtgtatcaatacactcaaatttttggatgtaccat 35817744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 12362696 - 12362764
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||||||||||||||   ||| | |||||||||||||| ||||| ||| ||||||||||||| |||||    
12362696 tttaactattaatttattgattgggtgtaccaatacacttaaatttttgagtgtaccatagaatttgcc 12362764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 14746958 - 14746910
Alignment:
21 tttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||| |||| ||||||||| ||||||||| |||||||||||||||||||    
14746958 tttggtgtatcaatacacttaaattgttgagtgtaccatagaacttgcc 14746910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 32467108 - 32467052
Alignment:
4 aactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccata 60  Q
    ||||||||||||||  |||||||||||||||||||| ||||  ||| ||||||||||    
32467108 aactattaatttaatgatttgatgtaccaatacacttaaatgattgagtgtaccata 32467052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 36752548 - 36752604
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtacc 57  Q
    |||||||||||||||||| ||||  | ||||| ||||||||||||||||| ||||||    
36752548 tttaactattaatttaaggattttgtataccactacactcaaattgttggatgtacc 36752604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 19238842 - 19238787
Alignment:
21 tttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcctagtttt 76  Q
    |||| ||||||  |||||||||| ||||||||||||||||||| ||||||| ||||    
19238842 tttggtgtaccggtacactcaaaatgttgggtgtaccatagaatttgcctattttt 19238787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 27116530 - 27116471
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccata 60  Q
    |||||||||||||||    ||| | |||||||||||||||||||| ||||||||||||||    
27116530 tttaactattaatttgttgattgggtgtaccaatacactcaaatttttgggtgtaccata 27116471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 33145217 - 33145260
Alignment:
20 atttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    ||||| |||||||||||||||| ||| |||||||||||||||||    
33145217 atttggtgtaccaatacactcatatttttgggtgtaccatagaa 33145260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 35162419 - 35162360
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccata 60  Q
    ||||| |||||||||||  ||||| ||||||| |||||| ||||| ||||||||||||||    
35162419 tttaattattaatttaaagatttggtgtaccagtacacttaaatttttgggtgtaccata 35162360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 3425415 - 3425477
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    |||| |||||||||||  |||||||||||||||||||| |||| | ||| ||||| |||||||    
3425415 tttatctattaatttattaatttgatgtaccaatacacccaaaattttgagtgtatcatagaa 3425477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 14967300 - 14967238
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    |||||||| ||||||||  ||||  |||||||||||||||| ||  |||||||||||||||||    
14967300 tttaactactaatttaatgatttagtgtaccaatacactcatatctttgggtgtaccatagaa 14967238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 28332189 - 28332120
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaa-ttgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||    ||||| |||||||||||||||||| || ||| ||||||||||||| |||||    
28332189 tttaactattaatttgttgatttggtgtaccaatacactcaaattttttgagtgtaccatagaatttgcc 28332120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 38355054 - 38355111
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaat-tgttgggtgtacc 57  Q
    ||||||||| ||||||||| |||| ||||||| ||||||||||| |||| ||||||||    
38355054 tttaactataaatttaagagtttggtgtaccagtacactcaaatatgttaggtgtacc 38355111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 41802174 - 41802105
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||  ||||| ||||||||||||||| ||   ||||||||||| || || ||||||    
41802174 tttaactattaatttaatgatttggtgtaccaatacactcgaacctttgggtgtaccgtaaaatttgcct 41802105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 2021740 - 2021680
Alignment:
10 taatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||| |||||| |||| |  |||||||||||  ||||||||||||||||| ||||||    
2021740 taatttaacaatttggtgtatcggtacactcaaatatttgggtgtaccatagaatttgcct 2021680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 6335438 - 6335390
Alignment:
21 tttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||| ||||||  |||||||||| ||||||||||||||||||| |||||    
6335438 tttggtgtaccggtacactcaaaatgttgggtgtaccatagaatttgcc 6335390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 14096748 - 14096796
Alignment:
7 tattaatttaagaatttgatgtaccaatacactcaaattgttgggtgta 55  Q
    ||||||||||| |||||| |||| ||||||||||||||| ||| |||||    
14096748 tattaatttaacaatttggtgtatcaatacactcaaatttttgtgtgta 14096796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 16602721 - 16602769
Alignment:
21 tttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||| ||||||  |||||||||| ||||||||||||||||||| |||||    
16602721 tttggtgtaccggtacactcaaaatgttgggtgtaccatagaatttgcc 16602769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 21051642 - 21051710
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||||||||||||||   ||||| |||||||||||| ||||||  || | |||||||||||| |||||    
21051642 tttaactattaatttattgatttggtgtaccaatacattcaaatctttagatgtaccatagaatttgcc 21051710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 29996578 - 29996510
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||| |||| ||||||  |||||||||| | ||||||||| ||| |||| |||||||||||| |||||    
29996578 tttaattattgatttaacgatttgatgtaacgatacactcatatttttggatgtaccatagaatttgcc 29996510  T

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Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 34902001 - 34902061
Alignment:
10 taatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||| |||||| |||| |  |||||||||||  ||||||||||||||||| ||||||    
34902001 taatttaacaatttggtgtatcggtacactcaaatgtttgggtgtaccatagaatttgcct 34902061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35682165 - 35682121
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaatt 45  Q
    |||||| ||||||||||| || || ||||||||||||||||||||    
35682165 tttaacaattaatttaaggatatggtgtaccaatacactcaaatt 35682121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 36409954 - 36409906
Alignment:
21 tttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||| |||||| ||||||||||| |||||||||||||||| || |||||    
36409954 tttggtgtaccgatacactcaaaatgttgggtgtaccataaaatttgcc 36409906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 112; Significance: 2e-56; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 205 - 408
Target Start/End: Original strand, 37843685 - 37843888
Alignment:
205 gcattgtatggtctaaatttgtaataaacatgttatgtttcacaggtgttacaaaaatatcaacaaccttgccaactttattacttatatgatcatgttt 304  Q
    ||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||| ||||| | |||||||| | ||||||| ||    
37843685 gcattgtatggtctaaacttgttataaacatgttatgtttcacagttgttacaaaaatgtcaacaacctttccaacataattacttaaacgatcatgctt 37843784  T
305 aaaattaagttaattagctatttaccttgtcagttacaccgaagcacaccttcatgactaaaatgaaaattattcatgctcatagacaatataaattcaa 404  Q
    |||||| || |  ||||||||||||||||||||||||||||| |||| | ||||| |||| |||||||||||||||||||||| ||||| ||||| |||     
37843785 aaaatttagatgcttagctatttaccttgtcagttacaccgatgcactcgttcataactataatgaaaattattcatgctcatggacaaaataaaatcag 37843884  T
405 ccac 408  Q
    ||||    
37843885 ccac 37843888  T

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Target: chr3; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 201 - 408
Target Start/End: Original strand, 37838100 - 37838310
Alignment:
201 tatagcattgtatggtctaaatttgtaataaacatgttatgtttcacaggtgttacaaaaatatcaacaaccttgccaactttattacttatatgatcat 300  Q
    |||||||| |||||||||||| |||||||||||||||  |||||||||  ||||||||||||||||||||||||||||||| | ||||||| ||||||||    
37838100 tatagcatcgtatggtctaaacttgtaataaacatgtcctgtttcacacctgttacaaaaatatcaacaaccttgccaactat-ttacttaaatgatcat 37838198  T
301 gtttaaaattaagttaattagc----tatttaccttgtcagttacaccgaagcacaccttcatgactaaaatgaaaattattcatgctcatagacaatat 396  Q
    |||||||||| ||||   ||||    |||||| |||| |||||||||| |||||| | ||| |||||| || ||||| |||||| | |||| ||||||||    
37838199 gtttaaaatttagttgcctagctatttatttaacttgacagttacaccaaagcactcgttcttgactataacgaaaactattcacggtcatcgacaatat 37838298  T
397 aaattcaaccac 408  Q
    ||| ||||||||    
37838299 aaaatcaaccac 37838310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 29786935 - 29787006
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcctag 72  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
29786935 tttaactattaatttaagaatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcctag 29787006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 27079717 - 27079787
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||    
27079717 tttaactattaatttaaggatttggtgtaccaatacactcaaattgttgagtgtaccatagaacttgccta 27079787  T

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Target: chr3; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 27082684 - 27082754
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||    
27082684 tttaactattaatttaaggatttggtgtaccaatacactcaaattgttgagtgtaccatagaacttgccta 27082754  T

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Target: chr3; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 35171531 - 35171601
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||    
35171531 tttaactattaatttaagggtttggtgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 35171601  T

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Target: chr3; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 42067647 - 42067577
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||    
42067647 tttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgccta 42067577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 11140315 - 11140245
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| |||||||    
11140315 tttaactattaatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatagaatttgccta 11140245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 44365689 - 44365619
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||| |||||||    
44365689 tttaactattaatttaagaatttggtgtaccaatacacttaaattgttgggtgtatcatagaatttgccta 44365619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 40650135 - 40650066
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| | |||||||||||||||||||    
40650135 tttaactattaatttaaggatttggtgtaccaatacactcaaattgttagttgtaccatagaacttgcct 40650066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 42364265 - 42364333
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| |||||    
42364265 tttaactattaatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatagaatttgcc 42364333  T

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Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 42848544 - 42848614
Alignment:
1 tttaactattaatttaagaatttgatgt--accaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||| ||||| |||  |||||||||||||||||||||||||||||||||||||||||    
42848544 tttaactattaatttaaggatttggtgtgcaccaatacactcaaattgttgggtgtaccatagaacttgcc 42848614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 29347598 - 29347660
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    |||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||    
29347598 tttaactattaatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccatagaa 29347660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 31308945 - 31308875
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||||||| |||||||||||||| |||||||    
31308945 tttaactattaatttaaggatttggtgttccaatacactcaaattgttaggtgtaccatagaatttgccta 31308875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 46959622 - 46959560
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||    
46959622 tttaactattaatttaagaatttgacgtaccaatacactcaaattgttaggtgtacgatagaa 46959560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 876560 - 876629
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||| || ||||||    
876560 tttaactattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatataatttgcct 876629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 379221 - 379285
Alignment:
7 tattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| ||||    
379221 tattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttaccta 379285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 38785420 - 38785488
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||| || |||||    
38785420 tttaactattaatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatataatttgcc 38785488  T

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Target: chr3; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 44670596 - 44670664
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||| ||||  |||||||||||||||||||||||||||||||| ||||| |||||    
44670596 tttaactattaatttaaggattttgtgtaccaatacactcaaattgttgggtgtaccttagaatttgcc 44670664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 45636157 - 45636089
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||||||||||||||| |||| | |||||||||||||||||||||||||||||||| ||||| |||||    
45636157 tttaactattaatttaaaaattcggtgtaccaatacactcaaattgttgggtgtaccctagaatttgcc 45636089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 47948733 - 47948801
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||| ||||| ||||||||| |||| ||||||||||||||| |||||||||||||    
47948733 tttaactattaatttaaggatttggtgtaccaatgcacttaaattgttgggtgtatcatagaacttgcc 47948801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 4663476 - 4663545
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    ||||||||||||||||   |||||||||||||||||||||||| | ||| ||||||||||||||||||||    
4663476 tttaactattaatttattgatttgatgtaccaatacactcaaaattttgagtgtaccatagaacttgcct 4663545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 4393048 - 4392973
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcctagtttt 76  Q
    ||||| ||||||||||| |||||||||||||  |||||||||||||||  |||||| |||||| ||||||| ||||    
4393048 tttaattattaatttaataatttgatgtacccctacactcaaattgttaagtgtactatagaatttgcctaatttt 4392973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 39630228 - 39630299
Alignment:
1 tttaactatt-aatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||||| ||||||| |||| | ||||| ||||||||||||||||||| |||||||||||| |||||||    
39630228 tttaactatttaatttaaaaattcggtgtactaatacactcaaattgttggatgtaccatagaatttgccta 39630299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 6890496 - 6890422
Alignment:
3 taactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcctagtttta 77  Q
    ||||||||||||||| ||||||||||||||||||| ||||||| |||    |||||||||| |||| ||||||||    
6890496 taactattaatttaaaaatttgatgtaccaatacattcaaatttttgaaaataccatagaatttgcatagtttta 6890422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 37843546 - 37843646
Alignment:
102 tatacgctagtttattaatcatacaagaagtttttcaagttagtcgaactggtcaaaggacaactcattcatttatt--cccctctctctcattgtctaa 199  Q
    |||| ||||||||||| ||| || |||||||||| ||| || ||| || |  ||||||||||| |||||| ||||||  |||||||||||||||||||||    
37843546 tatatgctagtttattgatcttaaaagaagttttccaaattcgtcaaattaatcaaaggacaaatcattcctttattcccccctctctctcattgtctaa 37843645  T
200 t 200  Q
    |    
37843646 t 37843646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 31479624 - 31479565
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccata 60  Q
    ||||| ||||||||||| |||||| |||||| ||||||||||||| || |||||||||||    
31479624 tttaattattaatttaacaatttggtgtaccgatacactcaaatttttaggtgtaccata 31479565  T

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Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 7671871 - 7671809
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    |||||||||||||||    ||| | |||||||||||||||||||| |||||||||||||||||    
7671871 tttaactattaatttgtttattgggtgtaccaatacactcaaatttttgggtgtaccatagaa 7671809  T

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Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 27647546 - 27647476
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||||||||||    ||| | |||||||||||||||||||| ||| ||||||||||||| |||||||    
27647546 tttaactattaatttgttgattgggtgtaccaatacactcaaatttttgagtgtaccatagaatttgccta 27647476  T

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Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 39540738 - 39540677
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    ||||| ||||||||||| | |||||||||||| |||||||||| |||||| ||||||||||||    
39540738 tttaattattaatttaa-agtttgatgtaccagtacactcaaaatgttggatgtaccatagaa 39540677  T

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Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 47470492 - 47470426
Alignment:
5 actattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||||||||| ||||| ||||| |||||||||| ||| |||| |||| |||| ||||||||||    
47470492 actattaatttaaggatttggtgtactaatacactcacattcttggatgtagcataaaacttgccta 47470426  T

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Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 52776791 - 52776853
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    ||||| ||||||||||| |||||| ||||||  |||||||||||| |||||||||| ||||||    
52776791 tttaattattaatttaataatttggtgtaccggtacactcaaattattgggtgtacgatagaa 52776853  T

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Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 26885309 - 26885385
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaat-tgttgggtgtaccatagaacttgcctagtttt 76  Q
    |||||||||||||||||  | ||| |||||| |||||||||||| | |||||||||||||| || ||||||| ||||    
26885309 tttaactattaatttaaagaattggtgtaccgatacactcaaatatattgggtgtaccataaaatttgcctattttt 26885385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 43715086 - 43715154
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||||||||| ||||   ||||| ||||||||||||| |||||| |||| |||||||||||| |||||    
43715086 tttaactattagtttattgatttggtgtaccaatacacccaaatttttggatgtaccatagaatttgcc 43715154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 37627264 - 37627323
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccata 60  Q
    ||||| ||||||||||| |||||||| |||  ||||||||||| | ||||||||||||||    
37627264 tttaattattaatttaataatttgatatactgatacactcaaaattttgggtgtaccata 37627323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 21289151 - 21289221
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||||||||||    ||| | |||||| ||||||||||||| ||| ||||||||||||| |||||||    
21289151 tttaactattaatttgttgattgggtgtacctatacactcaaatttttgagtgtaccatagaatttgccta 21289221  T

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Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 36790245 - 36790295
Alignment:
21 tttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||| |||||| ||||||||||| ||||| ||||||||||||| |||||||    
36790245 tttggtgtaccgatacactcaaaatgttgagtgtaccatagaatttgccta 36790295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 44568631 - 44568581
Alignment:
21 tttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||| |||||| ||||||||||| |||| |||||||||||||| |||||||    
44568631 tttggtgtaccgatacactcaaaatgttaggtgtaccatagaatttgccta 44568581  T

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Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 51996756 - 51996818
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    ||||| |||||||||||   ||||||||||   |||||||||| |||||||||||||||||||    
51996756 tttaattattaatttaatgctttgatgtactggtacactcaaaatgttgggtgtaccatagaa 51996818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 4521627 - 4521676
Alignment:
21 tttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||| ||||||  |||||||||| ||||||||||||||||||| ||||||    
4521627 tttggtgtaccggtacactcaaaatgttgggtgtaccatagaatttgcct 4521676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 8965984 - 8965915
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaat-tgttgggtgtaccatagaacttgcc 69  Q
    ||||||||| |||||||| || || ||||||| ||||||||||| |||||| |||||| ||||| |||||    
8965984 tttaactataaatttaaggatctggtgtaccagtacactcaaatatgttggatgtaccgtagaatttgcc 8965915  T

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Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 15298580 - 15298629
Alignment:
8 attaatttaagaatttgatgtaccaatacactcaaattgttgggtgtacc 57  Q
    |||||||||| |||||| ||||||  |||||| |||||||||||||||||    
15298580 attaatttaataatttggtgtaccggtacacttaaattgttgggtgtacc 15298629  T

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Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 15804293 - 15804256
Alignment:
34 tacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||||| ||||||||||||||||||| |||||||    
15804293 tacactcaaaatgttgggtgtaccatagaatttgccta 15804256  T

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Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 16136960 - 16137029
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaat-tgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||  | | |||||||| |||||||||||| | |||| |||||||||||| |||||    
16136960 tttaactattaatttaaagagtggatgtaccgatacactcaaatatattggatgtaccatagaatttgcc 16137029  T

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Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 25592347 - 25592412
Alignment:
4 aactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||   ||||| |||| ||||||||||||||| |||| ||||||||| || |||||    
25592347 aactattaatttattgatttggtgtatcaatacactcaaatttttggatgtaccatataatttgcc 25592412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 40021148 - 40021079
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaat-tgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||  | | ||||||||| ||||||||||| | |||| |||||||||||| |||||    
40021148 tttaactattaatttaaagagtggatgtaccagtacactcaaatatattggatgtaccatagaatttgcc 40021079  T

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Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 15996889 - 15996821
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaat-tgttgggtgtaccatagaacttgc 68  Q
    ||||||||||||||||| || | ||||||||  |||||| |||| | ||||||||||||||||| ||||    
15996889 tttaactattaatttaaaaaatagatgtaccggtacacttaaatatattgggtgtaccatagaatttgc 15996821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 19547557 - 19547489
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||    ||| | |||||| ||||||||||||| |||| |||||||||||| |||||    
19547557 tttaactattaatttgttgattgggtgtaccgatacactcaaatttttggatgtaccatagaatttgcc 19547489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 34593761 - 34593717
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaatt 45  Q
    |||||||||||||||||  ||||| |||| |||||||||||||||    
34593761 tttaactattaatttaaagatttggtgtaacaatacactcaaatt 34593717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 35375871 - 35375939
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||| ||||||||||| |||||  ||||||  |||||| |||||||||| |||||| ||||| |||||    
35375871 tttaattattaatttaaaaatttagtgtaccggtacacttaaattgttggatgtaccgtagaatttgcc 35375939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 53516919 - 53516987
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||    ||| | |||||||||||||||||||| ||  ||||||||||||| |||||    
53516919 tttaactattaatttgttgattgggtgtaccaatacactcaaatttttaagtgtaccatagaatttgcc 53516987  T

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Target: chr8 (Bit Score: 63; Significance: 3e-27; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 14498641 - 14498711
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
14498641 tttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 14498711  T

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Target: chr8; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 29773513 - 29773439
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcctagttt 75  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
29773513 tttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcctagttt 29773439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 38502252 - 38502183
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||    
38502252 tttaactattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgcct 38502183  T

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Target: chr8; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 29229516 - 29229584
Alignment:
2 ttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||    
29229516 ttaactattaatttaagaatttggtgtaccaatacactcaaatggttgggtgtaccatagaatttgcct 29229584  T

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Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 37161572 - 37161504
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||    
37161572 tttaactattaatttaaggatttgatgtacctatacactcaaattgttgggtgtagcatagaacttgcc 37161504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 36002424 - 36002354
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||||||||||||| ||||| ||||| ||||||||||||||||||| ||||||||||||||||||||    
36002424 tttaactattaatttaaggatttggtgtactaatacactcaaattgttggatgtaccatagaacttgccta 36002354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 44934967 - 44934905
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
44934967 tttaactattaatttaaggatttgatgtaccaatacattcaaattgttgggtgtaccatagaa 44934905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 15726228 - 15726298
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| |||| |||||||||||| |||||||    
15726228 tttaactattaatttaaggatttggtgtaccaatacactcaaattattggatgtaccatagaatttgccta 15726298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 23286633 - 23286564
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||| ||||| ||||||||||||| ||||||||| |||||||||||||| ||||||    
23286633 tttaactattaatttaaggatttggtgtaccaatacacgcaaattgttaggtgtaccatagaatttgcct 23286564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 37511156 - 37511087
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| ||| ||||||    
37511156 tttaactattaatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccatcgaatttgcct 37511087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 28090260 - 28090192
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||| ||||| |||||||||| ||||||||| ||||||||||||||||| |||||    
28090260 tttaactattaatttaaggatttggtgtaccaatatactcaaattattgggtgtaccatagaatttgcc 28090192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 29459701 - 29459633
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||| || |||||    
29459701 tttaactattaatttaagaatttgatagatcaatacactcaaattgttgggtgtaccataaaatttgcc 29459633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 34332180 - 34332112
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||||||||| ||||||||| |||| ||||| ||||||||||||||||| |||||    
34332180 tttaactattaatttaagaatttggtgtaccaatgcacttaaattattgggtgtaccatagaatttgcc 34332112  T

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Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 12163281 - 12163343
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    |||||||||||||||||||||||||||||||||| || |||||| |||||||| |||||||||    
12163281 tttaactattaatttaagaatttgatgtaccaatgcattcaaatggttgggtgcaccatagaa 12163343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 12407709 - 12407771
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    |||||||||||||||||||||||||||||||||| || |||||| |||||||| |||||||||    
12407709 tttaactattaatttaagaatttgatgtaccaatgcattcaaatggttgggtgcaccatagaa 12407771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 946044 - 945974
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||||||||||||  ||||| ||||||||||||||||||| ||||| |||||| ||||| |||||||    
946044 tttaactattaatttaaagatttggtgtaccaatacactcaaatggttggatgtaccgtagaatttgccta 945974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 10280628 - 10280575
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgt 54  Q
    |||||||||||||||||  ||||| |||||||||||||||||||||||||||||    
10280628 tttaactattaatttaaagatttggtgtaccaatacactcaaattgttgggtgt 10280575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 27970080 - 27970011
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    ||||||||||||| ||| |||||| || |||  |||||||||||||||||||||||||||||| ||||||    
27970080 tttaactattaatataataatttggtgcaccggtacactcaaattgttgggtgtaccatagaatttgcct 27970011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 34047762 - 34047823
Alignment:
8 attaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||| |||||| ||||||  |||||||||||||||||||||||||||||| |||||    
34047762 attaatttaataatttggtgtaccggtacactcaaattgttgggtgtaccatagaatttgcc 34047823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 2273078 - 2273010
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||  ||||| |||||||||||||||| ||  ||||||||||||||||| |||||    
2273078 tttaactattaatttaatgatttggtgtaccaatacactcatatctttgggtgtaccatagaatttgcc 2273010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 12179990 - 12179928
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaat-tgttgggtgtaccataga 62  Q
    |||||||||||||||||||||||||||||||  |||||| |||| | ||||||||||||||||    
12179990 tttaactattaatttaagaatttgatgtacctgtacacttaaatattttgggtgtaccataga 12179928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 12424418 - 12424356
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaat-tgttgggtgtaccataga 62  Q
    |||||||||||||||||||||||||||||||  |||||| |||| | ||||||||||||||||    
12424418 tttaactattaatttaagaatttgatgtacctgtacacttaaatattttgggtgtaccataga 12424356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 19718689 - 19718759
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    ||||| |||||||||||  ||||| ||||| |||||||||||||| |||| |||||||||||| |||||||    
19718689 tttaattattaatttaatgatttggtgtactaatacactcaaatttttggatgtaccatagaatttgccta 19718759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 42444556 - 42444626
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||||||||||||  ||||| |||||||||||||||||||  || | |||||||||||| |||||||    
42444556 tttaactattaatttaatgatttggtgtaccaatacactcaaatctttagatgtaccatagaatttgccta 42444626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 16323627 - 16323558
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    ||||||||||||||||   ||||| |||||||||||||||||||  ||||||||| ||||||| ||||||    
16323627 tttaactattaatttattgatttggtgtaccaatacactcaaatctttgggtgtatcatagaatttgcct 16323558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 17642142 - 17642073
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||  ||||| |||||||||||||||| ||  |||| |||||||||||| ||||||    
17642142 tttaactattaatttaatgatttggtgtaccaatacactcatatctttggatgtaccatagaatttgcct 17642073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 23274690 - 23274621
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||  ||||| || ||||||||||||||||||| | ||||||| ||||| ||||||    
23274690 tttaactattaatttaaagatttggtgcaccaatacactcaaattgtagagtgtaccgtagaatttgcct 23274621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 37465752 - 37465684
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||||||||||||||   ||||| |||||||||||||| ||||| |||| |||||||||||| |||||    
37465752 tttaactattaatttattgatttggtgtaccaatacacttaaatttttggatgtaccatagaatttgcc 37465684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 43485379 - 43485447
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||||||||||||||   |||||||||||||||||||||||| | ||| |||||||||| || |||||    
43485379 tttaactattaatttattgatttgatgtaccaatacactcaaaattttgagtgtaccataaaatttgcc 43485447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 17096639 - 17096689
Alignment:
21 tttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||| |||||| ||||||||||| ||||||||||||||||||| |||||||    
17096639 tttggtgtaccgatacactcaaaatgttgggtgtaccatagaatttgccta 17096689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 6800110 - 6800179
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||| ||  ||||| |||||||||||||||||||  ||| |||||||||| || ||||||    
6800110 tttaactattaattcaatgatttggtgtaccaatacactcaaatctttgagtgtaccataaaatttgcct 6800179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 39347468 - 39347537
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    ||||||||||||||||   |||| ||||||||||||||||||||| || | ||||||||| || ||||||    
39347468 tttaactattaatttattgatttaatgtaccaatacactcaaattttttgatgtaccataaaatttgcct 39347537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 42165242 - 42165311
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    ||||| ||||||||||| |||||||| ||||  |||| |||||||||||| ||||||||| || ||||||    
42165242 tttaattattaatttaataatttgatataccggtacattcaaattgttggatgtaccatataatttgcct 42165311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 43049598 - 43049537
Alignment:
8 attaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||||||||  ||||| |||||||||||| ||||||| |||| |||||||||||| |||||    
43049598 attaatttaatgatttggtgtaccaatacattcaaatttttggatgtaccatagaatttgcc 43049537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 43331811 - 43331743
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    ||||| ||||||||||| | |||| ||||||  |||||||||| ||||||||||||||||||| ||||||    
43331811 tttaattattaatttaa-agtttggtgtaccggtacactcaaaatgttgggtgtaccatagaatttgcct 43331743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 44309633 - 44309565
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    ||||| ||||||||||| | |||| ||||||  |||||||||| ||||||||||||||||||| ||||||    
44309633 tttaattattaatttaa-agtttggtgtaccggtacactcaaaatgttgggtgtaccatagaatttgcct 44309565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 4475113 - 4475046
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||    ||||| |||||||||||||||||||| ||||||| ||||||||| |||||    
4475113 tttaactattaatttgttgatttggtgtaccaatacactcaaatttttgggtg-accatagaatttgcc 4475046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 12801156 - 12801105
Alignment:
20 atttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    ||||| ||||||  |||||||||||| ||||||||||||||||| |||||||    
12801156 atttggtgtaccggtacactcaaatttttgggtgtaccatagaatttgccta 12801105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 35754795 - 35754862
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgc 68  Q
    ||||| ||||||||||| ||||||||||| |  ||||  ||||||||||||| |||||||||| ||||    
35754795 tttaattattaatttaataatttgatgtatcggtacatgcaaattgttgggtataccatagaatttgc 35754862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 40776956 - 40777019
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaat-tgttgggtgtaccatagaa 63  Q
    ||||||||||||||||| || |  |||||| ||||||||||||| | |||||||||||||||||    
40776956 tttaactattaatttaaaaagtgaatgtacgaatacactcaaatattttgggtgtaccatagaa 40777019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 12633277 - 12633314
Alignment:
34 tacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||||| ||||||||||||||||||| |||||||    
12633277 tacactcaaaatgttgggtgtaccatagaatttgccta 12633314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 13483234 - 13483303
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||| |||||||||||   ||||||||| ||||||||| |||| | ||| ||||||||||||| ||||||    
13483234 tttatctattaatttattgatttgatgtcccaatacacccaaaattttgagtgtaccatagaatttgcct 13483303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 40154537 - 40154488
Alignment:
21 tttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||| |||||| ||||||||||| |||||||||||||||| || ||||||    
40154537 tttggtgtaccgatacactcaaaatgttgggtgtaccataaaatttgcct 40154488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 529335 - 529267
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||||||||||||||   | ||| ||||||||||||| |||||| ||  ||||||||||||| |||||    
529335 tttaactattaatttattgacttggtgtaccaatacacccaaattttttagtgtaccatagaatttgcc 529267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 2666566 - 2666502
Alignment:
8 attaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcctag 72  Q
    ||||||||||   |||| ||||||| |||||||||| |||| | |||||||||||| ||||||||    
2666566 attaatttaatgctttggtgtaccagtacactcaaaatgttagatgtaccatagaatttgcctag 2666502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 17069592 - 17069640
Alignment:
21 tttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||| |||||| ||||||||||| || |||||||||||||||| |||||    
17069592 tttggtgtaccgatacactcaaaatggtgggtgtaccatagaatttgcc 17069640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 17578681 - 17578633
Alignment:
21 tttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||| |||||| ||||||||||| || |||||||||||||||| |||||    
17578681 tttggtgtaccgatacactcaaaatggtgggtgtaccatagaatttgcc 17578633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 29604372 - 29604420
Alignment:
21 tttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||||||||||||||| ||||| | ||| ||||||||||||| |||||    
29604372 tttgatgtaccaatacattcaaaatattgagtgtaccatagaatttgcc 29604420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 30777612 - 30777680
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||| ||||||||||| | |||| ||||||  |||||||||| |||||  |||||||||||| |||||    
30777612 tttaattattaatttaaaattttggtgtaccggtacactcaaaatgttgaatgtaccatagaatttgcc 30777680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 39722038 - 39721970
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||| |||||||||||  || ||||||||  ||||||||||||  ||| ||||||||||||| |||||    
39722038 tttaaatattaatttaattatctgatgtacggatacactcaaatatttgagtgtaccatagaatttgcc 39721970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 34280567 - 34280636
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
34280567 tttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 34280636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 43137703 - 43137772
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
43137703 tttaactattaatttaagaatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgcct 43137772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 27538983 - 27538915
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
27538983 tttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 27538915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 51436152 - 51436220
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
51436152 tttaactattaatttaagaatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 51436220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 30539637 - 30539569
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||    
30539637 tttaactattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgcc 30539569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 38835920 - 38835858
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
38835920 tttaactattaatttaagaatttgatgtaccaatacactcaaattattaggtgtaccatagaa 38835858  T

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Target: chr4; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 52589139 - 52589073
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttg 67  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||    
52589139 tttaactattaatttaaggatttggtgtaccaatacactcaaattgttggatgtaccatagaacttg 52589073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 28037753 - 28037685
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||| |||||    
28037753 tttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgcaccatagaatttgcc 28037685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 41759999 - 41760067
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||| |||||    
41759999 tttaactattaatttaaggatttggtgtaccaatacactcaaattgttggatgtaccatagaatttgcc 41760067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14802780 - 14802710
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||||||||||||| ||||| |||| ||||||||||||||||||| ||||||||||||| |||||||    
14802780 tttaactattaatttaaggatttggtgtatcaatacactcaaattgttgagtgtaccatagaatttgccta 14802710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 3716393 - 3716325
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| |||| |||||||||||| |||||    
3716393 tttaactattaatttaaggatttggtgtaccaatacactcaaattattggatgtaccatagaatttgcc 3716325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 52809282 - 52809352
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    ||||||||||||||||| |||| | ||||||||||||||||||||||||| |||||||||| | |||||||    
52809282 tttaactattaatttaaaaattcggtgtaccaatacactcaaattgttggatgtaccatagtatttgccta 52809352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 30342893 - 30342825
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||  ||||| ||||||||||||||||||| ||||||||||||||| || |||||    
30342893 tttaactattaatttaaagatttggtgtaccaatacactcaaatggttgggtgtaccatataatttgcc 30342825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 48579247 - 48579315
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||| ||||| |||||||||||| |||||||||||| ||||||||| || |||||    
48579247 tttaactattaatttaaggatttggtgtaccaatacattcaaattgttggatgtaccatataatttgcc 48579315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 36592373 - 36592432
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccata 60  Q
    |||||||||||||||||| ||||| |||| ||||||||||||||| ||||||||||||||    
36592373 tttaactattaatttaaggatttggtgtaacaatacactcaaatttttgggtgtaccata 36592432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 46041769 - 46041699
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||||||||||||  ||||| |||| |||||||||||||||||||| |||||  |||||||||||||    
46041769 tttaactattaatttaaagatttggtgtatcaatacactcaaattgttggatgtactttagaacttgccta 46041699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 37855189 - 37855120
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||| ||||| |||||| |||||||||||||||| ||| || ||||||| ||||||    
37855189 tttaactattaatttaaggatttggtgtacctatacactcaaattgttaggtatatcatagaatttgcct 37855120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 18425456 - 18425524
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||  ||||| |||||||||||||||| ||  ||||||||||||||||| |||||    
18425456 tttaactattaatttaatgatttggtgtaccaatacactcatatctttgggtgtaccatagaatttgcc 18425524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 47302088 - 47302028
Alignment:
10 taatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    ||||||||| ||||||||||||||||||||||||||||| |||| |||||| || ||||||    
47302088 taatttaaggatttgatgtaccaatacactcaaattgttaggtgcaccataaaatttgcct 47302028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 18052277 - 18052352
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcctagtttt 76  Q
    ||||| ||||||||||| |||||||||||||  |||||||||||||||  |||||| |||||| ||||||| ||||    
18052277 tttaattattaatttaataatttgatgtacccctacactcaaattgttaagtgtactatagaatttgcctaatttt 18052352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 31908511 - 31908441
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||||||||||||  ||||| |||||||||||||||| ||  ||||||||| ||||||| |||||||    
31908511 tttaactattaatttaatgatttggtgtaccaatacactcatatctttgggtgtatcatagaatttgccta 31908441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 52940548 - 52940480
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||| ||||||||||| |||||| || |||  ||||||||||||||||| |||||||||||| |||||    
52940548 tttaattattaatttaataatttggtgcaccggtacactcaaattgttggatgtaccatagaatttgcc 52940480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 53389185 - 53389253
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||  ||||  |||||| |||||||||||||||| | |||||||||||| |||||    
53389185 tttaactattaatttaaagatttagtgtaccgatacactcaaattgtttgatgtaccatagaatttgcc 53389253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 55722543 - 55722475
Alignment:
2 ttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    ||||||||||||||||| ||||  |||||||||||| |||||||||| | |||| ||||||| ||||||    
55722543 ttaactattaatttaaggatttagtgtaccaatacattcaaattgttagatgtatcatagaatttgcct 55722475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 48066346 - 48066412
Alignment:
4 aactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    ||||||||||||||  ||||| | |||||||||||||||||  |||| |||||||||||| ||||||    
48066346 aactattaatttaatgatttggtataccaatacactcaaatgattggatgtaccatagaatttgcct 48066412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 1414437 - 1414506
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||  ||||| |||||||||||||||||||  || ||||| ||||| || ||||||    
1414437 tttaactattaatttaatgatttggtgtaccaatacactcaaatctttaggtgtgccataaaatttgcct 1414506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 9858312 - 9858243
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||  ||||| |||| ||||||||||| ||  |||||||||| |||||| ||||||    
9858312 tttaactattaatttaatgatttggtgtatcaatacactcatatctttgggtgtactatagaatttgcct 9858243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 19842506 - 19842437
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    ||||| ||||||||||| |||||| |||||   |||||||||||| |||| |||||||||||| ||||||    
19842506 tttaattattaatttaacaatttggtgtactggtacactcaaatttttggatgtaccatagaatttgcct 19842437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 29646692 - 29646623
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    ||||||||||||||||   ||||| |||||||||||||||||| | || | |||||||||||| ||||||    
29646692 tttaactattaatttattgatttggtgtaccaatacactcaaaatttttgatgtaccatagaatttgcct 29646623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 31681404 - 31681335
Alignment:
2 ttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||||||||||   ||||| |||||||||||||  ||||| || |||||||||||||| |||||||    
31681404 ttaactattaatttattgatttggtgtaccaatacaccaaaatttttaggtgtaccatagaatttgccta 31681335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 36091127 - 36091058
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||  ||||| |||||||||||||||| ||  |||| ||||||||| || ||||||    
36091127 tttaactattaatttaatgatttggtgtaccaatacactcatatctttggatgtaccatataatttgcct 36091058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 46216135 - 46216180
Alignment:
26 tgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||||||||||||||| |||||||||| |||||| |||||||    
46216135 tgtaccaatacactcaaatttttgggtgtacaatagaatttgccta 46216180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 46004680 - 46004724
Alignment:
19 aatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    |||||| |||||||||||||||||||| |||| ||||||||||||    
46004680 aatttggtgtaccaatacactcaaatttttggatgtaccatagaa 46004724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 9356720 - 9356795
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaat-tgttgggtgtaccatagaacttgcctagttt 75  Q
    |||||||||||||||||  | |  || |||||||||||| |||| | ||||||||||||||||| |||||||||||    
9356720 tttaactattaatttaaagactgaatttaccaatacactaaaatatattgggtgtaccatagaatttgcctagttt 9356795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 37992020 - 37992079
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccata 60  Q
    ||||| |||||||||||   |||||||||||  |||||||||| ||||||||||||||||    
37992020 tttaattattaatttaatgctttgatgtaccggtacactcaaaatgttgggtgtaccata 37992079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 12756051 - 12756001
Alignment:
20 atttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    ||||| |||||| ||||||||||||| ||| ||||||||||||| ||||||    
12756051 atttggtgtaccgatacactcaaatttttgagtgtaccatagaatttgcct 12756001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 32737527 - 32737597
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    ||||||||||||| |||  ||||| || |||  |||||||||||| ||| ||||||||||||| |||||||    
32737527 tttaactattaatataaatatttggtgcaccggtacactcaaattattgagtgtaccatagaatttgccta 32737597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 39162143 - 39162205
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    ||||||||||||||||   | ||| ||||||||||||| |||||| ||| |||||||||||||    
39162143 tttaactattaatttattgacttggtgtaccaatacacccaaatttttgagtgtaccatagaa 39162205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 56361651 - 56361718
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    ||||||||||||||||   ||||| |||||||||||||||||||| ||  ||||| ||||||| ||||||    
56361651 tttaactattaatttattgatttggtgtaccaatacactcaaattttt--gtgtaacatagaatttgcct 56361718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 6807332 - 6807401
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    ||||| |||||||||||   |||| |||||  ||||| ||||| ||||||||||||||||||| ||||||    
6807332 tttaattattaatttaatgttttggtgtactgatacattcaaaatgttgggtgtaccatagaatttgcct 6807401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 9381095 - 9381046
Alignment:
7 tattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtac 56  Q
    |||| ||||||||||||| |||||||||||| ||||||| |||| |||||    
9381095 tattcatttaagaatttggtgtaccaatacaatcaaattcttggatgtac 9381046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9580004 - 9580053
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgg 50  Q
    ||||| ||||||||||| |||||||||||||  ||| |||||||||||||    
9580004 tttaattattaatttaataatttgatgtaccggtaccctcaaattgttgg 9580053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9585699 - 9585748
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgg 50  Q
    ||||| ||||||||||| |||||||||||||  ||| |||||||||||||    
9585699 tttaattattaatttaataatttgatgtaccggtaccctcaaattgttgg 9585748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 30891453 - 30891494
Alignment:
28 taccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||  ||||||||||||||||| |||||    
30891453 taccaatacactcaaatctttgggtgtaccatagaatttgcc 30891494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 38975343 - 38975277
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||  ||||  ||||| |||||||||||  | ||||||||||||||||| |||||    
38975343 tttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 38975277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 52324305 - 52324374
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    ||||| |||||||||||   |||| ||||||  |||||||||| |||||||||||||||| || ||||||    
52324305 tttaaatattaatttaatgctttggtgtaccggtacactcaaaatgttgggtgtaccataaaatttgcct 52324374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 17370634 - 17370682
Alignment:
21 tttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||| ||||||  |||||||||| ||||||||||||||||||| |||||    
17370634 tttggtgtaccggtacactcaaaatgttgggtgtaccatagaatttgcc 17370682  T

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Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 48207126 - 48207078
Alignment:
21 tttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||| ||||||  |||||||||| ||||||||||||||||||| |||||    
48207126 tttggtgtaccggtacactcaaaatgttgggtgtaccatagaatttgcc 48207078  T

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Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 35305219 - 35305150
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
35305219 tttaactattaatttaagaatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcct 35305150  T

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Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 51519850 - 51519781
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
51519850 tttaactattaatttaagaatttggtgtaccaatacactcaaattgttgggtgtaccatagaacatgcct 51519781  T

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Target: chr1; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 39190895 - 39190963
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
39190895 tttaactattaatttaagaatttggtgtaccaatacactcaaattgttggatgtaccatagaacttgcc 39190963  T

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Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 52303081 - 52303010
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcctag 72  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||    
52303081 tttaactattaatttaagaatttgatgtaccaatacactcaaattattgggtgtatcatagaatttgcctag 52303010  T

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Target: chr1; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 31931036 - 31931106
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||    
31931036 tttaactattaatttaaggatttgatgtaccaatacactcaaattgttggatgtaccatagaatttgccta 31931106  T

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Target: chr1; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 922180 - 922248
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||    
922180 tttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 922248  T

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Target: chr1; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 37498812 - 37498744
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||    
37498812 tttaactattaatttaagaatttggtgtaccaatacactcaaattgttggatgtaccatagaatttgcc 37498744  T

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Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 50905649 - 50905581
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||    
50905649 tttaactattaatttaaggattcggtgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 50905581  T

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Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 38262472 - 38262542
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||    
38262472 tttaacaattaatttaagaatttggtgtaccaatacactcaaattgttaagtgtaccatagaacttgccta 38262542  T

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Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 46771070 - 46771140
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||||||||||||| ||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
46771070 tttaactattaatttaaggatttggtataccaatacactcaaattgttaggtgtaccatagaacttgccta 46771140  T

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Target: chr1; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 45423677 - 45423608
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||| ||||| |||||||||||||| |||||||||| |||||||||||||||||||    
45423677 tttaactattaatttaaggatttggtgtaccaatacacttaaattgttggatgtaccatagaacttgcct 45423608  T

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Target: chr1; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 18641956 - 18641888
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||| ||||  |||||||||||||||||||||||| |||||||||||||||||||    
18641956 tttaactattaatttaaggatttagtgtaccaatacactcaaattgttgagtgtaccatagaacttgcc 18641888  T

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Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 27295126 - 27295058
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||| |||||    
27295126 tttaactattaatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 27295058  T

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Target: chr1; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 41073338 - 41073268
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||||||||||||| ||||  ||||||||||||||||||| |||||||||||||||||| |||||||    
41073338 tttaactattaatttaaggattttgtgtaccaatacactcaaatggttgggtgtaccatagaatttgccta 41073268  T

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Target: chr1; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 51781442 - 51781504
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||    
51781442 tttaactattaatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatagaa 51781504  T

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Target: chr1; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 51985002 - 51984940
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||    
51985002 tttaactattaatttaaggatttgatgtaccaatacactcaaattattgagtgtaccatagaa 51984940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 16482644 - 16482575
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||| ||||||    
16482644 tttaactattaatttaaggatttggtgtaccaatacacttaaattattgggtgtaccatagaatttgcct 16482575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 34256521 - 34256452
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    ||||| ||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||| ||||||    
34256521 tttaattattaatttaataatttggtgtaccgatacactcaaattgttgggtgtaccatagaatttgcct 34256452  T

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Target: chr1; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 8461864 - 8461932
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||| |||||    
8461864 tttaactattaatttaaggatttggtgtaccaatacactcaaatggttggatgtaccatagaagttgcc 8461932  T

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Target: chr1; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 23459896 - 23459964
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||||||||||||||||  |||||| |||||||||||||||||||||||||||| |||||||| ||||    
23459896 tttaactattaatttaagggtttgatataccaatacactcaaattgttgggtgtatcatagaacctgcc 23459964  T

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Target: chr1; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 39971607 - 39971675
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||||||||| | |||||||||||||||||| ||||  |||||||||||||||||    
39971607 tttaactattaatttaagaatttggtataccaatacactcaaattattggacgtaccatagaacttgcc 39971675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 6520323 - 6520382
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccata 60  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||    
6520323 tttaactattaatttaaaaattcgatgtaccaatacactcaaattgttggatgtaccata 6520382  T

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Target: chr1; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 28493878 - 28493809
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||| ||||| |||| ||||||||| ||||| ||||||||||||||||| ||||||    
28493878 tttaactattaatttaaggatttggtgtaacaatacacttaaattattgggtgtaccatagaatttgcct 28493809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 5956865 - 5956933
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||||||||||||||| |||| | |||||||||||||| |||||||||||||||||||| || |||||    
5956865 tttaactattaatttaaaaattcggtgtaccaatacacttaaattgttgggtgtaccatataatttgcc 5956933  T

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Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 44978937 - 44978869
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||| ||||||||||| |||||| ||||||  |||||||||||||||||||||||||||||| |||||    
44978937 tttaattattaatttaataatttggtgtaccggtacactcaaattgttgggtgtaccatagaatttgcc 44978869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 45673384 - 45673333
Alignment:
12 atttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||    
45673384 atttaaggatttgatgtatcaatacactcaaattgttgggtgtaccatagaa 45673333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 51184110 - 51184048
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    |||||||||||||||||  ||||| |||||||||||||||||||  |||||||||||||||||    
51184110 tttaactattaatttaatgatttgttgtaccaatacactcaaatctttgggtgtaccatagaa 51184048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 11778974 - 11779033
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccata 60  Q
    |||||||||||||||||  ||||| |||||||||||||||||||  ||||||||||||||    
11778974 tttaactattaatttaatgatttgttgtaccaatacactcaaatctttgggtgtaccata 11779033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 2247135 - 2247073
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    |||||||||||||||||  ||||| |||||||||||||||||||  || ||||||||||||||    
2247135 tttaactattaatttaatgatttggtgtaccaatacactcaaatctttaggtgtaccatagaa 2247073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 9166941 - 9166871
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    ||||||||||||||||   ||||| |||||||||||||||||||| |||||||||| ||| || |||||||    
9166941 tttaactattaatttattgatttggtgtaccaatacactcaaatttttgggtgtactatataatttgccta 9166871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 26102811 - 26102873
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    |||||||||||||||||| ||||| |||| ||||||||| ||||| ||| |||||||||||||    
26102811 tttaactattaatttaaggatttggtgtatcaatacacttaaattattgagtgtaccatagaa 26102873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 43146487 - 43146425
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    ||||| ||||||||||| ||||| |||||||  ||||||||||||||||| ||||||||||||    
43146487 tttaattattaatttaataatttaatgtaccggtacactcaaattgttggatgtaccatagaa 43146425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 51369386 - 51369329
Alignment:
12 atttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||||| ||||| |||| ||||||||||||||||||| ||||||||||||| |||||    
51369386 atttaaggatttggtgtatcaatacactcaaattgttgagtgtaccatagaatttgcc 51369329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 7122025 - 7121957
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||  ||||| |||||||||||||||||||  || ||| |||||||||| |||||    
7122025 tttaactattaatttaatgatttgttgtaccaatacactcaaatctttaggtataccatagaatttgcc 7121957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 42317163 - 42317231
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||||||||||||||   |||||||||||||||||||||||| | ||| |||||||||| || |||||    
42317163 tttaactattaatttattgatttgatgtaccaatacactcaaaattttgagtgtaccatataatttgcc 42317231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 48616785 - 48616853
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||||||||||||||   ||| | |||||||||||||||||||| ||| ||||||||||||| |||||    
48616785 tttaactattaatttattgattgggtgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 48616853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 23056833 - 23056774
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccata 60  Q
    ||||||||||||||||| |||| | |||||||||||||| ||||| |||| |||||||||    
23056833 tttaactattaatttaaaaattcggtgtaccaatacacttaaattattggatgtaccata 23056774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 29106702 - 29106771
Alignment:
1 tttaactattaatttaagaatttgatgtacca---atacactcaaattgttgggtgtaccatagaacttg 67  Q
    |||||||||||||||||  ||||| |||||||   |||||||||||||||||| ||||| ||||||||||    
29106702 tttaactattaatttaaagatttggtgtaccagcaatacactcaaattgttggctgtactatagaacttg 29106771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 33082055 - 33081987
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    ||||| ||||||||||| | |||| ||||||  |||||||||| ||||||||||||||||||| ||||||    
33082055 tttaattattaatttaata-tttggtgtaccggtacactcaaaatgttgggtgtaccatagaatttgcct 33081987  T

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Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 33098993 - 33099062
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    ||||||||||||||||   ||||  ||||||||||||||||||||||||  ||||||||| || ||||||    
33098993 tttaactattaatttattgattttgtgtaccaatacactcaaattgttgaatgtaccatataatttgcct 33099062  T

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Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 632986 - 633054
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||    ||| | |||||||||||||||||||| ||| ||||||||||||| |||||    
632986 tttaactattaatttgttgattgggtgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 633054  T

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Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 26424179 - 26424247
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||| ||||||||||| |||||  ||||||  |||||||||||||||| || |||||||||| |||||    
26424179 tttaattattaatttaataatttagtgtaccggtacactcaaattgttgagtataccatagaatttgcc 26424247  T

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Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 34038502 - 34038578
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaat-tgttgggtgtaccatagaacttgcctagtttt 76  Q
    ||||||||||||||||| || |   ||||||||||||||||||| | |||| |||||||||||| ||||||| ||||    
34038502 tttaactattaatttaaaaagtgagtgtaccaatacactcaaatatattggatgtaccatagaatttgcctattttt 34038578  T

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Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 32145006 - 32145077
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactc-aaattgttgggtgtaccatagaacttgccta 71  Q
    ||||||||| |||||||| ||||||||||||  ||||||| ||| ||||||||||||  ||||| |||||||    
32145006 tttaactataaatttaaggatttgatgtaccggtacactcaaaaatgttgggtgtacggtagaatttgccta 32145077  T

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Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 35912993 - 35913040
Alignment:
24 gatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    ||||||||  |||||||||| ||||||||||||||||||| |||||||    
35912993 gatgtaccggtacactcaaaatgttgggtgtaccatagaatttgccta 35913040  T

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Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 44246336 - 44246403
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgc 68  Q
    |||||||||||||||||| ||||| |||||||||||| || || | |||| | |||||||||| ||||    
44246336 tttaactattaatttaaggatttggtgtaccaatacattcgaacttttggatataccatagaatttgc 44246403  T

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Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 45318004 - 45317929
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcctagtttt 76  Q
    ||||||||||||| |||| ||||| ||||||  |||| ||||||| ||| ||||||||||||  ||||||| ||||    
45318004 tttaactattaatataagtatttggtgtaccggtacattcaaattattgagtgtaccatagattttgcctaatttt 45317929  T

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Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 27352915 - 27352853
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    |||||||||||||| || |||||  |||| ||||||||||||||  |||| ||||||||||||    
27352915 tttaactattaattcaataattttgtgtatcaatacactcaaatctttggatgtaccatagaa 27352853  T

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Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 35874276 - 35874346
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaat-tgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||  | |   ||||||||||||||||||| | ||||||||||||||||| ||||||    
35874276 tttaactattaatttaaagagtgagtgtaccaatacactcaaatatattgggtgtaccatagaatttgcct 35874346  T

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Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 5360560 - 5360609
Alignment:
21 tttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||| ||||||  |||||||||| ||||||||||||||||||| ||||||    
5360560 tttggtgtaccggtacactcaaaatgttgggtgtaccatagaatttgcct 5360609  T

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Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23304475 - 23304414
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccataga 62  Q
    |||||||||||||||||  ||||  |||||||||||||||  ||  ||||||||||||||||    
23304475 tttaactattaatttaatgattttgtgtaccaatacactcgtatctttgggtgtaccataga 23304414  T

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Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 26308540 - 26308609
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaat-tgttgggtgtaccatagaacttgcc 69  Q
    ||||| ||| ||||||||| |||| ||||||  ||||||||||| |||||||||||| |||||| |||||    
26308540 tttaattataaatttaagagtttggtgtaccggtacactcaaatatgttgggtgtacgatagaatttgcc 26308609  T

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Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 12227189 - 12227121
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||| |||||||||||   |||| |||||   |||||||||| ||||||||||||||||||| |||||    
12227189 tttaattattaatttaatgctttggtgtactggtacactcaaaatgttgggtgtaccatagaatttgcc 12227121  T

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Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 31890426 - 31890482
Alignment:
19 aatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcctagttt 75  Q
    |||||||||||| |||||||||| ||| || ||||||| |||||| |||||| ||||    
31890426 aatttgatgtacaaatacactcatatttttaggtgtacaatagaatttgccttgttt 31890482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 5e-26; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 4673940 - 4674016
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcctagtttta 77  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||| |||||    
4673940 tttaactattaatttaagaatttggtgtaccaatacactcaaattgttggatgtaccatagaatttgcctaatttta 4674016  T

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Target: chr2; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 42427909 - 42427977
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||    
42427909 tttaactattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgcc 42427977  T

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Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 6884227 - 6884165
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
6884227 tttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaa 6884165  T

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Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 11813535 - 11813597
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
11813535 tttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaa 11813597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 58988 - 58927
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccataga 62  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
58988 tttaactattaatttaaggatttgatgtaccaatacactcaaattattgggtgtaccataga 58927  T

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Target: chr2; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 34665639 - 34665577
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||    
34665639 tttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtataccatagaa 34665577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 14533160 - 14533229
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||| ||||| |||||||||||| | ||||||||||||||||||||||| ||||||    
14533160 tttaactattaatttaaggatttggtgtaccaatacatttaaattgttgggtgtaccatagaatttgcct 14533229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 38963402 - 38963471
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||| || ||||||    
38963402 tttaactattaatttaaggatttgatgtaccaatacattcaaattgttggatgtaccatacaatttgcct 38963471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 5092065 - 5091997
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| | |||||||||||| |||||    
5092065 tttaactattaatttaaggatttggtgtaccaatacactcaaattgttagatgtaccatagaatttgcc 5091997  T

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Target: chr2; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 11227695 - 11227627
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| |||| |||||||||||| |||||    
11227695 tttaactattaatttaaggatttggtgtaccaatacactcaaattattggatgtaccatagaatttgcc 11227627  T

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Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 5389539 - 5389601
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||    
5389539 tttaactattaatttaagtatttggtgtaccaatacactcaaattggtggatgtaccatagaa 5389601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 12071223 - 12071161
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    ||||| ||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||    
12071223 tttaattattaatttaataatttcatgtaccaatacactcaaattgttgggtataccatagaa 12071161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 3383525 - 3383593
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| ||||| ||||||||| || |||||    
3383525 tttaactattaatttaaggatttggtgtaccaatacactcaaatggttggatgtaccataaaatttgcc 3383593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 42046132 - 42046076
Alignment:
12 atttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgc 68  Q
    ||||||| ||||| |||||||||||||||||||||||| ||||||||||||| ||||    
42046132 atttaaggatttggtgtaccaatacactcaaattgttgagtgtaccatagaatttgc 42046076  T

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Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 1353564 - 1353505
Alignment:
12 atttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    ||||||| ||||| |||||||||||||||| ||| ||||||||||||||||| |||||||    
1353564 atttaaggatttggtgtaccaatacactcatattattgggtgtaccatagaatttgccta 1353505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 37083276 - 37083217
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccata 60  Q
    ||||||||||||||||| |||| | |||||||||||||| |||||||||| |||||||||    
37083276 tttaactattaatttaaaaattcggtgtaccaatacacttaaattgttggatgtaccata 37083217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 8371904 - 8371966
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    ||||||||||||||||| |||||| |||| ||||||||| ||||| |||| ||||||||||||    
8371904 tttaactattaatttaaaaatttggtgtatcaatacacttaaattattggatgtaccatagaa 8371966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 8362744 - 8362813
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    ||||| ||||||||||| |||||| ||||||  |||||||||||||||||||||  ||||||| ||||||    
8362744 tttaattattaatttaataatttggtgtaccggtacactcaaattgttgggtgtgtcatagaatttgcct 8362813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 11088284 - 11088215
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    ||||| ||||||||||| |||||| ||||||  |||||||||||  ||||||||||||||||| ||||||    
11088284 tttaattattaatttaacaatttggtgtaccggtacactcaaatatttgggtgtaccatagaatttgcct 11088215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 12547432 - 12547364
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||  ||||| |||| ||||||||||| ||  ||||||||||||||||| |||||    
12547432 tttaactattaatttaatgatttggtgtatcaatacactcatatctttgggtgtaccatagaatttgcc 12547364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 32499217 - 32499150
Alignment:
2 ttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||   ||||| |||| ||||||||||||||| || |||||||||||||| |||||    
32499217 ttaactattaatttattgatttggtgtatcaatacactcaaattctttggtgtaccatagaatttgcc 32499150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 5420295 - 5420237
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccat 59  Q
    |||||||||||||||||  ||||| |||||||||||||||||||  || ||||||||||    
5420295 tttaactattaatttaatgatttggtgtaccaatacactcaaatctttaggtgtaccat 5420237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 6513602 - 6513672
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    ||||||||||||||||   ||||  |||||||||||||||||||  || |||||||||||||| |||||||    
6513602 tttaactattaatttattgatttagtgtaccaatacactcaaatctttaggtgtaccatagaatttgccta 6513672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 7467161 - 7467120
Alignment:
28 taccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||| ||||||||||||||||| |||||    
7467161 taccaatacactcaaatttttgggtgtaccatagaatttgcc 7467120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 33423363 - 33423416
Alignment:
10 taatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    ||||||||| ||||| |||||||||||| |||||||||| | ||||||||||||    
33423363 taatttaaggatttggtgtaccaatacattcaaattgttagatgtaccatagaa 33423416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 34438524 - 34438592
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||||||||||||||   ||||| ||| |||||||||||||||| |||| ||||||||| || |||||    
34438524 tttaactattaatttattgatttggtgttccaatacactcaaattattggatgtaccataaaatttgcc 34438592  T

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Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 8504366 - 8504424
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccata 60  Q
    ||||| ||||||||||| | |||||||||||| |||||||||| ||||| ||||||||||    
8504366 tttaattattaatttaata-tttgatgtaccagtacactcaaaatgttgagtgtaccata 8504424  T

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Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 15426361 - 15426416
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtac 56  Q
    ||||| ||||||||||| |||||| ||||||  ||||||||||||||||| |||||    
15426361 tttaattattaatttaataatttggtgtaccggtacactcaaattgttggatgtac 15426416  T

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Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 30980949 - 30980871
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaat-tgttgggtgtaccatagaacttgcctagttttat 78  Q
    |||||||||||||||||  | |  ||||||||||||||| |||| | ||||||||||||||||| ||| ||| ||||||    
30980949 tttaactattaatttaaagagtgaatgtaccaatacactaaaatatattgggtgtaccatagaatttgtctatttttat 30980871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 36489426 - 36489364
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    ||||||||||||||||   ||||  |||||||||||||||||||  |||||||||| ||||||    
36489426 tttaactattaatttattgatttagtgtaccaatacactcaaatctttgggtgtacaatagaa 36489364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 5615434 - 5615381
Alignment:
10 taatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    ||||||||  ||||||||||||  |||||||||||| |||| ||||||||||||    
5615434 taatttaacgatttgatgtaccggtacactcaaatttttggatgtaccatagaa 5615381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 15771651 - 15771716
Alignment:
4 aactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||||||||||||  ||| | |||||||||||||| ||||  |||||||||| |||||| |||||    
15771651 aactattaatttaatgattgggtgtaccaatacacttaaataattgggtgtactatagaatttgcc 15771716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 25332969 - 25333038
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    ||||| ||||||||||| |||||| |||||   | |||| |||||||||||||||||||| || ||||||    
25332969 tttaattattaatttaataatttggtgtactggtccacttaaattgttgggtgtaccataaaatttgcct 25333038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 6438513 - 6438580
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||  ||||| |||||||||||||| | ||  ||| ||||||||||||| |||||    
6438513 tttaactattaatttaatgatttggtgtaccaatacact-atatctttgagtgtaccatagaatttgcc 6438580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 20212516 - 20212560
Alignment:
26 tgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||| ||||| ||| ||||||||||||| ||||||    
20212516 tgtaccaatacacttaaatttttgagtgtaccatagaatttgcct 20212560  T

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Target: chr7 (Bit Score: 59; Significance: 8e-25; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 30862857 - 30862787
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||    
30862857 tttaactattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgccta 30862787  T

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Target: chr7; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 30624061 - 30624130
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    ||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||    
30624061 tttaactattaatttaaaaatttggtgtaccaatacactcaaattattgggtgtaccatagaacttgcct 30624130  T

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Target: chr7; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 3909996 - 3909928
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||| |||||    
3909996 tttaactattaatttaaaaattcggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 3909928  T

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Target: chr7; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 38129723 - 38129791
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||||||||||||||| |||||| |||||||||||||||||||| |||||| ||||||||||||||||    
38129723 tttaactattaatttaaaaatttggtgtaccaatacactcaaattattgggtctaccatagaacttgcc 38129791  T

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Target: chr7; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 1691329 - 1691391
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||    
1691329 tttaactattaatttaaggatttgatgtaccaatacactcaaatggttggatgtaccatagaa 1691391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 21699627 - 21699689
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    |||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||    
21699627 tttaactattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaa 21699689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 41913432 - 41913502
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||| || |||||||    
41913432 tttaactattaatttaaggatttggtgtaccaatacactcaaattgttggatgtaccatataatttgccta 41913502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 41331797 - 41331729
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||| ||||||| ||||| ||||||||||||||||||||||| ||||||||||| ||||||||    
41331797 tttaactattgatttaaggatttggtgtaccaatacactcaaattgttaggtgtaccataaaacttgcc 41331729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 41381565 - 41381495
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    ||||||||||| |||||  ||||||||||||||||||||||||||||| ||||||||||| || |||||||    
41381565 tttaactattactttaaagatttgatgtaccaatacactcaaattgtttggtgtaccatataatttgccta 41381495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 31903423 - 31903482
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccata 60  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| |||| ||||    
31903423 tttaactattaatttaaggatttgatgtaccaatacattcaaattgttggatgtatcata 31903482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 45458761 - 45458698
Alignment:
6 ctattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||||||||||| ||||| |||||||||||||| ||||||||||||||| ||||||| |||||    
45458761 ctattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaacatagaatttgcc 45458698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 1343087 - 1343017
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    ||||| |||| |||||| |||||| ||||||  |||||||||||||||||||||||||||||| |||||||    
1343087 tttaattattgatttaataatttggtgtaccggtacactcaaattgttgggtgtaccatagaatttgccta 1343017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 28326749 - 28326687
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| |||| ||||| ||||||    
28326749 tttaactattaatttaaggatttggtgtaccaatacactcaaattattggatgtacgatagaa 28326687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 40941943 - 40941881
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    |||||||||||||||||  ||||  |||||||||||||||||||||||| |||||||||||||    
40941943 tttaactattaatttaaagattttgtgtaccaatacactcaaattgttgagtgtaccatagaa 40941881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 42710999 - 42710929
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||||||||||||||||||| ||||||||| |||| ||||| || | |||||||||||| |||||||    
42710999 tttaactattaatttaagaatttggtgtaccaatgcacttaaattattagatgtaccatagaatttgccta 42710929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 45857812 - 45857882
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||||||||||||  ||||| |||||||||||||||| ||  ||||||||||||||||| |||||||    
45857812 tttaactattaatttaatgatttggtgtaccaatacactcatatctttgggtgtaccatagaatttgccta 45857882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 18990159 - 18990091
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||||||||||||||   ||||| |||||||||||||||||||| || |||||||||||||| |||||    
18990159 tttaactattaatttattgatttggtgtaccaatacactcaaattttttggtgtaccatagaatttgcc 18990091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 23331759 - 23331699
Alignment:
10 taatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    ||||||||| ||||| |||||||||||||||||||||||  ||||||||||||| ||||||    
23331759 taatttaaggatttggtgtaccaatacactcaaattgttaagtgtaccatagaatttgcct 23331699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 27956446 - 27956377
Alignment:
1 tttaactattaatttaaga-atttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||||||||||||| | | ||||| |||||||||| |||||||||||| |||||||||||||| |||||    
27956446 tttaactattaattttaaagatttggtgtaccaatatactcaaattgttaggtgtaccatagaatttgcc 27956377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 11486064 - 11485996
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||  ||||| ||||||||||| || ||||  ||||||||||||||||| |||||    
11486064 tttaactattaatttaatgatttggtgtaccaatactcttaaatctttgggtgtaccatagaatttgcc 11485996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 44964159 - 44964227
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||  ||||| |||||||||||||||||||  || ||||||||||| || |||||    
44964159 tttaactattaatttaatgatttgttgtaccaatacactcaaatctttaggtgtaccatataatttgcc 44964227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 31482442 - 31482380
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    |||||||||||||| ||  ||||| |||||||||||||||||||  ||| |||||||||||||    
31482442 tttaactattaattcaatgatttggtgtaccaatacactcaaatatttgagtgtaccatagaa 31482380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 42974963 - 42974895
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||| ||||||||  ||||| ||||||||| |||||| ||  ||||||||||||||||| |||||    
42974963 tttaactactaatttaatgatttggtgtaccaatgcactcatatgtttgggtgtaccatagaatttgcc 42974895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 43069143 - 43069079
Alignment:
6 ctattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||| |||||| ||||||||||||||||| |  || ||||||||||| || ||||||    
43069143 ctattaatttaataatttggtgtaccaatacactcaagtctttaggtgtaccataaaatttgcct 43069079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 43750143 - 43750075
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||    ||| | |||||||||||||||||||| ||| ||||||||||||| |||||    
43750143 tttaactattaatttgttgattgggtgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 43750075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 2290859 - 2290796
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaat-tgttgggtgtaccatagaa 63  Q
    ||||||||| ||||||||  |||| ||||||  ||||||||||| |||||||||||||||||||    
2290859 tttaactataaatttaagtgtttggtgtaccggtacactcaaatatgttgggtgtaccatagaa 2290796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7527115 - 7527072
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaat 44  Q
    ||||||||||||||||||| |||| | |||||||||||||||||    
7527115 tttaactattaatttaagagtttggtataccaatacactcaaat 7527072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 47748140 - 47748199
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccata 60  Q
    |||||||||||||||||| | ||| | |||||||||| ||||||| || |||||||||||    
47748140 tttaactattaatttaaggacttggtataccaatacattcaaatttttaggtgtaccata 47748199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 13806284 - 13806346
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    ||||| |||| |||||| |||||| | ||||  ||||||||||| ||||||||||||||||||    
13806284 tttaattatttatttaataatttggtataccggtacactcaaatcgttgggtgtaccatagaa 13806346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 29689281 - 29689331
Alignment:
19 aatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||| ||||||| |||||||||||| ||| ||||||||||||| |||||    
29689281 aatttggtgtaccagtacactcaaatttttgagtgtaccatagaatttgcc 29689331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 30936430 - 30936492
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    |||||||||||||||||  ||||  |||||||||||||||| ||  ||||||||| |||||||    
30936430 tttaactattaatttaatgattttgtgtaccaatacactcatatctttgggtgtatcatagaa 30936492  T

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Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 41311121 - 41311053
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    ||||| ||||||||||| | |||| ||||||  |||||||||| ||||| ||||||||||||| ||||||    
41311121 tttaattattaatttaata-tttggtgtaccggtacactcaaaatgttgagtgtaccatagaatttgcct 41311053  T

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Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 11640343 - 11640295
Alignment:
21 tttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||| ||||||  |||||||||| ||||||||||||||||||| |||||    
11640343 tttggtgtaccggtacactcaaaatgttgggtgtaccatagaatttgcc 11640295  T

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Target: chr6 (Bit Score: 59; Significance: 8e-25; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 17545673 - 17545611
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
17545673 tttaactattaatttaagaatttggtgtaccaatacactcaaattgttgggtgtaccatagaa 17545611  T

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Target: chr6; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 26358891 - 26358961
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||    
26358891 tttaactattaatttaagggtttggtgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 26358961  T

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Target: chr6; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 13390453 - 13390384
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||    
13390453 tttaactattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgcct 13390384  T

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Target: chr6; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 2258971 - 2258909
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||    
2258971 tttaactattaatttaaggatttagtgtaccaatacactcaaattgttgggtgtaccatagaa 2258909  T

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Target: chr6; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 4110619 - 4110544
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcctagtttt 76  Q
    |||||||||||||||||| ||||  |||||||||| | | ||||| ||||||||||||||||||||||||||||||    
4110619 tttaactattaatttaaggatttagtgtaccaatatatttaaattattgggtgtaccatagaacttgcctagtttt 4110544  T

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Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 24487625 - 24487683
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccat 59  Q
    |||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||    
24487625 tttaactattaatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccat 24487683  T

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Target: chr6; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 24212980 - 24212911
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||| ||||  ||||||||||||||||||| ||||| |||||||||||| ||||||    
24212980 tttaactattaatttaaggatttagtgtaccaatacactcaaatggttggatgtaccatagaatttgcct 24212911  T

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Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 6848578 - 6848510
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||||||||||| ||||  | ||||||| |||||||||||||||||||||||||||| |||||    
6848578 tttaactattaatttaaggattttgtataccaatgcactcaaattgttgggtgtaccatagaatttgcc 6848510  T

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Target: chr6; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 4901287 - 4901346
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccata 60  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||| | |||||||||    
4901287 tttaactattaatttaaggatttaatgtaccaatacactcaaattgttagatgtaccata 4901346  T

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Target: chr6; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 32834115 - 32834182
Alignment:
4 aactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    ||||||||||||||  ||||| |||||||||||||||||||| || |||||||||||||| |||||||    
32834115 aactattaatttaatgatttggtgtaccaatacactcaaattattaggtgtaccatagaatttgccta 32834182  T

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Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 10888154 - 10888216
Alignment:
7 tattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||||||||| |||||||||||||| ||||||||||||||||| ||||||||| || |||||    
10888154 tattaatttaataatttgatgtaccagtacactcaaattgttggatgtaccatataatttgcc 10888216  T

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Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 7344654 - 7344722
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||| |||| |||||| |||||| ||||||  |||||||||||||||||||||||||||||| |||||    
7344654 tttaattatttatttaataatttggtgtaccggtacactcaaattgttgggtgtaccatagaatttgcc 7344722  T

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Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 1096289 - 1096220
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||  ||||  |||||||||||| | ||| | ||||||||||||||||||||||||    
1096289 tttaactattaatttaaagatttagtgtaccaatacaataaaaatattgggtgtaccatagaacttgcct 1096220  T

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Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 8401754 - 8401823
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||  ||||| ||||| ||||||||||||| ||||| ||||||||| || ||||||    
8401754 tttaactattaatttaaagatttggtgtacgaatacactcaaatggttggatgtaccatataatttgcct 8401823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 11446804 - 11446736
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||||||||||||||   ||||| |||||||||||||||| ||  ||||||||||||||||| |||||    
11446804 tttaactattaatttattgatttggtgtaccaatacactcatatctttgggtgtaccatagaatttgcc 11446736  T

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Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 26315508 - 26315447
Alignment:
8 attaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    |||||||||| |||||| ||||||  ||||||||||||||||| ||||||||| || |||||    
26315508 attaatttaataatttggtgtaccggtacactcaaattgttggatgtaccataaaatttgcc 26315447  T

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Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 1705655 - 1705604
Alignment:
20 atttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    ||||| |||||| ||||||||||||| ||| ||||||||||||| |||||||    
1705655 atttggtgtaccgatacactcaaatttttgagtgtaccatagaatttgccta 1705604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 6975038 - 6975100
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    ||||| ||||||||||| |||||| | ||||   ||||||||||| |||||||||||||||||    
6975038 tttaattattaatttaacaatttggtataccggcacactcaaatttttgggtgtaccatagaa 6975100  T

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Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 15383542 - 15383612
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||| |||||||   ||||| | |||||||||||||||||| |||| ||||||||| || |||||||    
15383542 tttaactaataatttactgatttggtataccaatacactcaaatttttggatgtaccatataatttgccta 15383612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 21181188 - 21181138
Alignment:
20 atttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    ||||| |||||| ||||||||||||| ||| ||||||||||||| ||||||    
21181188 atttggtgtaccgatacactcaaatttttgagtgtaccatagaatttgcct 21181138  T

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Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 34196147 - 34196217
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    ||||||||||||||||   |||||||  | ||||||||||||||| ||| |||||||||| || |||||||    
34196147 tttaactattaatttattgatttgattaatcaatacactcaaatttttgagtgtaccataaaatttgccta 34196217  T

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Target: scaffold0005 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 36947 - 37017
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 71  Q
    |||||||||||||||||| ||||| |||| ||||||||||||||||||| ||||||||||||| |||||||    
36947 tttaactattaatttaaggatttggtgtatcaatacactcaaattgttgagtgtaccatagaatttgccta 37017  T

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Target: scaffold0625 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 6601 - 6669
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 69  Q
    ||||||||||||||||   ||||| |||||||||||||||||||| || |||||||||||||| |||||    
6601 tttaactattaatttattgatttggtgtaccaatacactcaaattttttggtgtaccatagaatttgcc 6669  T

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Target: scaffold0077 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 48078 - 48033
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattg 46  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||    
48078 tttaactattaatttaaggatttggtgtaccaatacactcaaattg 48033  T

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Target: scaffold0060 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 45829 - 45759
Alignment:
2 ttaactattaatttaagaatttgatgtaccaatacactcaaat-tgttgggtgtaccatagaacttgccta 71  Q
    ||||||||||||||||  |||||||||| | |||||||||||| | |||| |||||||||||| |||||||    
45829 ttaactattaatttaaagatttgatgtatcgatacactcaaatattttggatgtaccatagaatttgccta 45759  T

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Target: scaffold0604 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 2088 - 2026
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    |||||||||||||||    ||| | |||||||||||||||||||| ||| |||||||||||||    
2088 tttaactattaatttgttgattgggtgtaccaatacactcaaatttttgagtgtaccatagaa 2026  T

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Target: scaffold0325 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 1552 - 1613
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccatagaa 63  Q
    ||||| ||||||||||| | |||||||||||  |||||||||| |||||| ||||||||||||    
1552 tttaattattaatttaata-tttgatgtaccggtacactcaaaatgttggatgtaccatagaa 1613  T

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Target: scaffold0113 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 29313 - 29255
Alignment:
1 tttaactattaatttaagaatttgatgtaccaatacactcaaattgttgggtgtaccat 59  Q
    |||||||||||||||    ||| | |||||||||||||||||||| |||||||||||||    
29313 tttaactattaatttgttgattgggtgtaccaatacactcaaatttttgggtgtaccat 29255  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 404726 - 404684
Alignment:
28 taccaatacactcaaattgttgggtgtaccatagaacttgcct 70  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||    
404726 taccaatacactcaaatttttgagtgtaccatagaatttgcct 404684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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