View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17535_high_10 (Length: 367)
Name: NF17535_high_10
Description: NF17535
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17535_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 331; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 1 - 351
Target Start/End: Original strand, 44493415 - 44493765
Alignment:
| Q |
1 |
tgcactcaactaccatatttatattgccaattacccccactctcaaacacactataattattataatctaagtctcgtagatccagcacaactacaatta |
100 |
Q |
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| T |
44493415 |
tgcactcaactaccatatttatattgccaataacccccactctcaaaaacactataattattataatctaaatctcatagatccagcacaactacaatta |
44493514 |
T |
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| Q |
101 |
ttctctcctttaccatgagagggaaaacagcatcattgctggctctcatgccaattctctccacaattttagttctactattttcagttaccaatttctc |
200 |
Q |
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| T |
44493515 |
ttctctcctttaccatgagagggaaaacagcatcattgctggctctcatgccaattctctccacaattttagttctactattttcagttaccaatttctc |
44493614 |
T |
|
| Q |
201 |
aaaattagcaacagcagcaacactccaaacaaaccacattcaagtagcccaatcagcatgcgaaggaacactctatcaagacctttgtgtctcaacctta |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44493615 |
aaaattagcaacagcagcaacactccaaacaaaccacattcaagtagcccaatcagcatgcgaaggaacactctatcaagacctttgtgtctcaacctta |
44493714 |
T |
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| Q |
301 |
tccactctcccagatcttacctcaaaaacagtccctcaaattatttgctct |
351 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
44493715 |
tccactctcccagatcttacctcaaaaacagtcccgcaaattatttgctct |
44493765 |
T |
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