View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17535_low_8 (Length: 393)
Name: NF17535_low_8
Description: NF17535
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17535_low_8 |
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Alignment Details
Target: chr6 (Bit Score: 326; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 10 - 377
Target Start/End: Original strand, 32094336 - 32094700
Alignment:
| Q |
10 |
aatattctagtcacagatgaagaaaaacttagtgttgtggccaaagattatttttctaatttactatagccgcaaataagtgacacaacacctgttatag |
109 |
Q |
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| T |
32094336 |
aatattctagtcaaagatgaagaaaaactt---gttgtggcgaaagataatttttctaatttattatagccgcaaataagtgacacaacacctgttatag |
32094432 |
T |
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| Q |
110 |
aagttgttaatgagtctattacgttggaagataacaacttactaatagcaccttttgacatagaggagtttaaagctgcagttttttcaatgaaacctga |
209 |
Q |
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| T |
32094433 |
aagttgttaatgagtctattacgttggaagataacaacttactaatagcaccttttgacatagaggaatttaaagctgcagttttttcaatgaaacctga |
32094532 |
T |
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| Q |
210 |
taagtgtccaggaccggatggctataacccatgattttttcagaagttttggccgacatgtggtgaagagttattcaaccaatgttgttcgtggctgatg |
309 |
Q |
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| T |
32094533 |
taagtgtccaggactggatggctataacccatgattttttcagaagttttggccgacatgtggtgaagagttattcaaccaatgttgttcgtggctgatg |
32094632 |
T |
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| Q |
310 |
tctagtacattaccttcatctttaaactcaacaaatattgcactcattccgaagggagactctcaaac |
377 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32094633 |
tctagtactttaccttcatctttaaactcaacaaatattgcactcattccgaagggagactctcaaac |
32094700 |
T |
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