View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17539_high_11 (Length: 403)
Name: NF17539_high_11
Description: NF17539
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17539_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 375; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 375; E-Value: 0
Query Start/End: Original strand, 1 - 383
Target Start/End: Original strand, 30744487 - 30744869
Alignment:
| Q |
1 |
aagtccttgtgaatacatcatattgtcagcagcaatcatgattccaagaacaaaatatatcaaagcgatgagtttgatggaaggaggaacataagaagct |
100 |
Q |
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| T |
30744487 |
aagtccttgtgaatacatcatattgtcagcagcaatcatgattccaagaacaaaatatatcaaagcgatgagtttgatggaaggaggaacataagaagct |
30744586 |
T |
|
| Q |
101 |
gaaacctctgaagaagaagaaggaattgtgaataacggaatgagcaagactgggaaggcaatagtttggactaaagtagccatccatgtactatttccac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30744587 |
gaaacctctgaagaagaagaaggaattgtgaataacggaatgagcaagactgggaaggcaatagtttggactaaagtagccatccatgtactatttccac |
30744686 |
T |
|
| Q |
201 |
cttgatcatagtaaaaccttccaaggataactgcagcagattgtccaacgatgagaaacattatgctgagtcccaccagaaaccaccattgccatcgctt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30744687 |
cttgatcatagtaaaaccttccaaggataactgcagcagattgtccaacgatgagaaacattatgctgagtcccaccagaaaccaccattgccatcgctt |
30744786 |
T |
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| Q |
301 |
gtaattgttaaacggcagttcattaattgttccggctatgatcatcggttcttcattatctgtaatcgaaagcaacattaagt |
383 |
Q |
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| T |
30744787 |
gtatttgttaaacggtagttcattaattgttccggctatgatcatcggttcttcattatctgtaatcgaaagcaacattaagt |
30744869 |
T |
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