View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17539_low_1 (Length: 741)

Name: NF17539_low_1
Description: NF17539
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17539_low_1
NF17539_low_1
[»] scaffold0018 (2 HSPs)
scaffold0018 (17-576)||(173124-173680)
scaffold0018 (634-687)||(173738-173790)
[»] chr1 (42 HSPs)
chr1 (398-502)||(38547041-38547145)
chr1 (397-502)||(39134726-39134832)
chr1 (397-502)||(45758498-45758603)
chr1 (398-494)||(5316692-5316788)
chr1 (398-494)||(23185439-23185535)
chr1 (392-494)||(9173022-9173124)
chr1 (392-494)||(9181004-9181106)
chr1 (397-502)||(6221682-6221786)
chr1 (398-494)||(4971623-4971719)
chr1 (400-496)||(6771801-6771897)
chr1 (398-494)||(27559649-27559745)
chr1 (400-494)||(14146312-14146406)
chr1 (399-502)||(43235774-43235879)
chr1 (398-494)||(1366883-1366979)
chr1 (398-494)||(5027561-5027657)
chr1 (398-494)||(44655753-44655849)
chr1 (397-502)||(26803952-26804054)
chr1 (392-511)||(33170754-33170873)
chr1 (398-494)||(17168968-17169064)
chr1 (398-494)||(19955729-19955825)
chr1 (398-485)||(21740942-21741029)
chr1 (399-493)||(51607445-51607540)
chr1 (400-494)||(3406430-3406524)
chr1 (400-494)||(3440296-3440390)
chr1 (397-502)||(5533316-5533422)
chr1 (401-503)||(38853526-38853627)
chr1 (398-496)||(50881440-50881538)
chr1 (399-496)||(40501796-40501893)
chr1 (400-492)||(16140069-16140161)
chr1 (397-499)||(10925957-10926060)
chr1 (397-495)||(50146307-50146405)
chr1 (400-494)||(41697144-41697238)
chr1 (398-494)||(13913485-13913583)
chr1 (399-481)||(35392295-35392376)
chr1 (398-471)||(6889646-6889719)
chr1 (398-471)||(6891492-6891565)
chr1 (398-471)||(22865466-22865538)
chr1 (526-576)||(43235889-43235939)
chr1 (634-686)||(10926171-10926223)
chr1 (398-441)||(27906734-27906777)
chr1 (397-451)||(17322627-17322681)
chr1 (634-679)||(39134950-39134995)
[»] scaffold1590 (1 HSPs)
scaffold1590 (397-502)||(263-368)
[»] scaffold0097 (1 HSPs)
scaffold0097 (397-502)||(38918-39023)
[»] chr8 (37 HSPs)
chr8 (397-502)||(15167420-15167525)
chr8 (399-502)||(15078751-15078854)
chr8 (397-502)||(7944527-7944632)
chr8 (399-502)||(25561502-25561603)
chr8 (399-501)||(8102906-8103008)
chr8 (398-494)||(23798267-23798363)
chr8 (398-494)||(45475818-45475914)
chr8 (397-500)||(8646201-8646303)
chr8 (400-502)||(5721552-5721654)
chr8 (397-502)||(41677178-41677284)
chr8 (397-502)||(11290177-11290282)
chr8 (397-502)||(39332410-39332515)
chr8 (398-494)||(23606635-23606731)
chr8 (398-494)||(30883330-30883426)
chr8 (392-494)||(10917392-10917494)
chr8 (397-502)||(5973112-5973217)
chr8 (397-502)||(23941096-23941201)
chr8 (398-494)||(2952227-2952323)
chr8 (398-494)||(5860750-5860846)
chr8 (414-502)||(5942689-5942777)
chr8 (398-494)||(13534693-13534788)
chr8 (398-494)||(13624233-13624328)
chr8 (398-494)||(42600783-42600879)
chr8 (400-494)||(37430166-37430260)
chr8 (397-494)||(41879182-41879279)
chr8 (397-502)||(14509988-14510092)
chr8 (397-474)||(30674408-30674485)
chr8 (400-502)||(34789870-34789972)
chr8 (405-494)||(3048530-3048619)
chr8 (397-502)||(34048710-34048817)
chr8 (636-685)||(8646024-8646073)
chr8 (397-437)||(9108551-9108591)
chr8 (399-438)||(34868184-34868223)
chr8 (526-576)||(8102847-8102897)
chr8 (637-685)||(34048938-34048986)
chr8 (539-576)||(15167546-15167583)
chr8 (539-576)||(25561639-25561676)
[»] scaffold1320 (1 HSPs)
scaffold1320 (399-502)||(1347-1450)
[»] chr6 (25 HSPs)
chr6 (397-502)||(2477589-2477694)
chr6 (399-494)||(33774121-33774216)
chr6 (398-494)||(28075787-28075883)
chr6 (398-494)||(13727405-13727501)
chr6 (398-494)||(17353958-17354054)
chr6 (398-494)||(20711726-20711822)
chr6 (398-494)||(21479498-21479594)
chr6 (399-500)||(20611788-20611889)
chr6 (398-494)||(27788694-27788790)
chr6 (403-502)||(21183686-21183785)
chr6 (398-493)||(21280550-21280645)
chr6 (398-496)||(34397859-34397957)
chr6 (398-494)||(19737698-19737794)
chr6 (400-494)||(24711007-24711101)
chr6 (397-502)||(6159434-6159539)
chr6 (397-476)||(30121784-30121863)
chr6 (398-490)||(1155855-1155947)
chr6 (400-494)||(30832532-30832626)
chr6 (286-343)||(31094072-31094129)
chr6 (415-502)||(4036944-4037031)
chr6 (398-471)||(27314184-27314258)
chr6 (398-494)||(235230-235328)
chr6 (286-325)||(31051191-31051230)
chr6 (146-228)||(31093573-31093652)
chr6 (524-574)||(2477702-2477752)
[»] chr4 (56 HSPs)
chr4 (397-502)||(27112028-27112133)
chr4 (397-502)||(36118462-36118567)
chr4 (397-502)||(52468284-52468389)
chr4 (397-499)||(10042004-10042106)
chr4 (398-494)||(54780783-54780879)
chr4 (397-500)||(2135325-2135428)
chr4 (397-500)||(24396934-24397037)
chr4 (397-488)||(36178684-36178775)
chr4 (413-499)||(4167911-4167997)
chr4 (398-494)||(38209596-38209692)
chr4 (398-494)||(43455536-43455632)
chr4 (399-494)||(37777229-37777324)
chr4 (397-494)||(2790745-2790842)
chr4 (397-502)||(36362875-36362979)
chr4 (397-502)||(45656173-45656278)
chr4 (397-494)||(47128993-47129090)
chr4 (398-494)||(10978906-10979002)
chr4 (398-494)||(48209246-48209342)
chr4 (400-502)||(37744916-37745019)
chr4 (398-502)||(51691920-51692026)
chr4 (398-494)||(34027585-34027681)
chr4 (398-494)||(34768579-34768675)
chr4 (392-494)||(54083241-54083343)
chr4 (403-496)||(5128852-5128945)
chr4 (401-494)||(13460213-13460306)
chr4 (398-495)||(35779331-35779427)
chr4 (397-502)||(39329396-39329501)
chr4 (405-502)||(40217230-40217327)
chr4 (398-486)||(32128598-32128686)
chr4 (400-488)||(37514671-37514759)
chr4 (400-494)||(32915391-32915485)
chr4 (398-496)||(10428202-10428308)
chr4 (397-478)||(39655258-39655339)
chr4 (415-494)||(40089522-40089601)
chr4 (398-494)||(19498510-19498604)
chr4 (397-492)||(35465115-35465209)
chr4 (400-494)||(1105538-1105632)
chr4 (398-460)||(17679440-17679502)
chr4 (398-471)||(51964737-51964813)
chr4 (398-494)||(16845027-16845124)
chr4 (392-482)||(16882394-16882484)
chr4 (401-502)||(15735093-15735189)
chr4 (634-685)||(52468115-52468166)
chr4 (406-450)||(29425187-29425231)
chr4 (398-456)||(9578669-9578728)
chr4 (397-435)||(24614018-24614056)
chr4 (526-576)||(30507191-30507241)
chr4 (398-471)||(16922334-16922407)
chr4 (398-446)||(23508515-23508564)
chr4 (397-433)||(30507126-30507162)
chr4 (398-441)||(55255316-55255359)
chr4 (524-574)||(27111970-27112020)
chr4 (526-576)||(36118576-36118626)
chr4 (406-463)||(11906904-11906961)
chr4 (453-494)||(24969443-24969484)
chr4 (638-683)||(36178502-36178547)
[»] chr5 (54 HSPs)
chr5 (397-502)||(2412081-2412186)
chr5 (397-502)||(14318387-14318492)
chr5 (397-502)||(36868878-36868983)
chr5 (397-508)||(2024644-2024755)
chr5 (397-502)||(1366528-1366633)
chr5 (397-502)||(34425896-34426001)
chr5 (398-494)||(9364292-9364388)
chr5 (398-494)||(16198797-16198893)
chr5 (398-494)||(30854330-30854426)
chr5 (398-494)||(34756369-34756465)
chr5 (392-502)||(2530894-2531004)
chr5 (398-494)||(27079012-27079108)
chr5 (398-494)||(28822345-28822441)
chr5 (400-496)||(36187884-36187980)
chr5 (399-494)||(16799331-16799426)
chr5 (401-494)||(19523200-19523293)
chr5 (399-491)||(26718953-26719045)
chr5 (399-491)||(26988697-26988789)
chr5 (398-494)||(38869366-38869462)
chr5 (397-499)||(41911619-41911721)
chr5 (397-502)||(11242320-11242425)
chr5 (397-502)||(33037773-33037878)
chr5 (397-502)||(40794329-40794434)
chr5 (398-494)||(23284065-23284161)
chr5 (398-490)||(31194615-31194706)
chr5 (399-502)||(10543667-10543769)
chr5 (399-502)||(24395732-24395835)
chr5 (400-494)||(15480094-15480188)
chr5 (414-502)||(15639636-15639724)
chr5 (398-494)||(16592077-16592173)
chr5 (405-493)||(27924084-27924172)
chr5 (398-494)||(40389539-40389635)
chr5 (400-494)||(2274891-2274985)
chr5 (398-471)||(7338023-7338096)
chr5 (398-490)||(7670929-7671022)
chr5 (397-502)||(22648738-22648843)
chr5 (398-494)||(22986561-22986657)
chr5 (397-502)||(10407454-10407559)
chr5 (398-490)||(31881437-31881528)
chr5 (397-438)||(606211-606252)
chr5 (397-502)||(17344949-17345054)
chr5 (637-686)||(2024868-2024917)
chr5 (539-576)||(34425836-34425873)
chr5 (634-685)||(2411913-2411964)
chr5 (637-684)||(26719124-26719171)
chr5 (637-684)||(26988868-26988915)
chr5 (637-688)||(34307362-34307413)
chr5 (634-688)||(606156-606210)
chr5 (397-435)||(27530543-27530581)
chr5 (526-576)||(40794442-40794492)
chr5 (539-576)||(2024770-2024807)
chr5 (641-686)||(15639277-15639322)
chr5 (539-576)||(15639579-15639616)
chr5 (397-434)||(22875003-22875040)
[»] chr2 (42 HSPs)
chr2 (397-502)||(38400790-38400895)
chr2 (397-511)||(21665705-21665819)
chr2 (397-502)||(12134045-12134150)
chr2 (397-502)||(16097000-16097105)
chr2 (397-502)||(24035550-24035655)
chr2 (392-494)||(24410437-24410539)
chr2 (397-499)||(13800549-13800652)
chr2 (397-498)||(28425715-28425816)
chr2 (398-494)||(3155217-3155313)
chr2 (398-494)||(4505894-4505990)
chr2 (398-494)||(6965007-6965103)
chr2 (398-494)||(29939868-29939964)
chr2 (397-494)||(9046029-9046127)
chr2 (397-502)||(11912762-11912867)
chr2 (398-494)||(10762571-10762667)
chr2 (425-499)||(37182665-37182739)
chr2 (397-502)||(16227373-16227478)
chr2 (398-494)||(26716128-26716225)
chr2 (398-494)||(12337454-12337550)
chr2 (399-494)||(8907086-8907181)
chr2 (400-494)||(3953006-3953100)
chr2 (400-494)||(7162784-7162878)
chr2 (397-502)||(7742138-7742244)
chr2 (398-493)||(27506746-27506841)
chr2 (398-460)||(34694009-34694071)
chr2 (398-460)||(34716421-34716483)
chr2 (398-460)||(40636172-40636234)
chr2 (637-688)||(16227599-16227650)
chr2 (399-502)||(10252400-10252511)
chr2 (413-460)||(5952736-5952783)
chr2 (420-502)||(22727530-22727612)
chr2 (397-473)||(42029166-42029242)
chr2 (441-502)||(29694376-29694432)
chr2 (430-502)||(11952644-11952716)
chr2 (634-686)||(21665928-21665980)
chr2 (636-688)||(37182488-37182540)
chr2 (397-448)||(11952593-11952643)
chr2 (397-432)||(22727462-22727497)
chr2 (639-685)||(11952839-11952885)
chr2 (526-576)||(12134160-12134210)
chr2 (526-576)||(37622461-37622511)
chr2 (634-688)||(37622549-37622603)
[»] scaffold0012 (1 HSPs)
scaffold0012 (399-500)||(206496-206597)
[»] chr7 (46 HSPs)
chr7 (397-502)||(7398444-7398549)
chr7 (399-502)||(23859066-23859169)
chr7 (405-502)||(9021812-9021908)
chr7 (397-502)||(27237427-27237532)
chr7 (398-494)||(18776771-18776867)
chr7 (397-500)||(2611266-2611369)
chr7 (392-494)||(20091280-20091382)
chr7 (397-494)||(24525689-24525786)
chr7 (398-494)||(8171544-8171640)
chr7 (392-494)||(48983843-48983945)
chr7 (397-502)||(6765685-6765790)
chr7 (397-502)||(12419499-12419604)
chr7 (398-494)||(19692095-19692191)
chr7 (398-494)||(29077221-29077317)
chr7 (399-502)||(12981319-12981422)
chr7 (400-494)||(10955485-10955579)
chr7 (399-508)||(36891565-36891674)
chr7 (399-494)||(8239688-8239783)
chr7 (399-502)||(20153194-20153297)
chr7 (400-494)||(12596294-12596388)
chr7 (398-471)||(26254017-26254090)
chr7 (398-494)||(47984974-47985071)
chr7 (398-494)||(10329415-10329511)
chr7 (398-490)||(28749715-28749806)
chr7 (401-476)||(21763595-21763670)
chr7 (397-511)||(18201121-18201235)
chr7 (397-483)||(23744808-23744894)
chr7 (398-494)||(23551075-23551172)
chr7 (398-471)||(33162344-33162417)
chr7 (402-494)||(38414885-38414977)
chr7 (406-493)||(38971255-38971341)
chr7 (397-491)||(36902928-36903022)
chr7 (407-499)||(23020498-23020589)
chr7 (406-499)||(9014782-9014868)
chr7 (634-686)||(23858897-23858949)
chr7 (637-688)||(23020712-23020763)
chr7 (526-576)||(7398384-7398434)
chr7 (634-688)||(26917909-26917963)
chr7 (429-502)||(17800257-17800330)
chr7 (527-576)||(17800341-17800390)
chr7 (414-474)||(26917728-26917788)
chr7 (397-448)||(9014182-9014233)
chr7 (638-688)||(20153024-20153074)
chr7 (453-494)||(25010434-25010475)
chr7 (637-682)||(27237653-27237698)
chr7 (539-576)||(48983952-48983989)
[»] chr3 (38 HSPs)
chr3 (397-501)||(54574832-54574936)
chr3 (399-502)||(8420322-8420425)
chr3 (400-494)||(47467688-47467782)
chr3 (398-494)||(54619209-54619305)
chr3 (399-494)||(8073345-8073440)
chr3 (392-494)||(34290636-34290738)
chr3 (397-494)||(21582775-21582872)
chr3 (399-494)||(44708481-44708576)
chr3 (392-494)||(53506884-53506986)
chr3 (397-494)||(3953901-3953998)
chr3 (399-500)||(28689368-28689469)
chr3 (399-500)||(32319162-32319263)
chr3 (392-493)||(37168372-37168473)
chr3 (398-494)||(9878693-9878789)
chr3 (397-502)||(26279536-26279643)
chr3 (398-492)||(38681099-38681193)
chr3 (400-494)||(42098805-42098899)
chr3 (392-486)||(54407158-54407252)
chr3 (398-494)||(27078575-27078671)
chr3 (398-494)||(27084372-27084468)
chr3 (398-494)||(43207244-43207339)
chr3 (400-494)||(53149322-53149416)
chr3 (397-502)||(789932-790037)
chr3 (397-502)||(25855418-25855522)
chr3 (398-470)||(36716031-36716103)
chr3 (398-494)||(50939239-50939335)
chr3 (397-502)||(42453407-42453505)
chr3 (397-499)||(49393090-49393190)
chr3 (398-490)||(36605973-36606065)
chr3 (397-502)||(52374652-52374757)
chr3 (400-494)||(50258631-50258726)
chr3 (398-492)||(18372485-18372583)
chr3 (425-502)||(29598103-29598179)
chr3 (427-494)||(29620423-29620490)
chr3 (526-576)||(42453348-42453398)
chr3 (403-456)||(23641329-23641382)
chr3 (539-576)||(52374594-52374631)
chr3 (639-686)||(26279366-26279413)
[»] scaffold0182 (1 HSPs)
scaffold0182 (397-502)||(23998-24103)
[»] scaffold0039 (1 HSPs)
scaffold0039 (397-494)||(106539-106636)
[»] scaffold0007 (1 HSPs)
scaffold0007 (397-502)||(230864-230969)
[»] scaffold0070 (1 HSPs)
scaffold0070 (401-494)||(1344-1437)
[»] scaffold0022 (4 HSPs)
scaffold0022 (397-502)||(40078-40185)
scaffold0022 (397-502)||(138138-138245)
scaffold0022 (526-576)||(40016-40066)
scaffold0022 (526-576)||(138076-138126)
[»] scaffold0227 (2 HSPs)
scaffold0227 (427-502)||(16020-16095)
scaffold0227 (399-437)||(16123-16161)
[»] scaffold0202 (2 HSPs)
scaffold0202 (160-232)||(2255-2324)
scaffold0202 (286-328)||(2769-2811)
[»] scaffold0003 (1 HSPs)
scaffold0003 (418-502)||(351360-351444)
[»] scaffold0001 (1 HSPs)
scaffold0001 (400-449)||(183106-183155)


Alignment Details
Target: scaffold0018 (Bit Score: 340; Significance: 0; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 17 - 576
Target Start/End: Original strand, 173124 - 173680
Alignment:
Q  17 aggttttatacggcttctgccaaattctgcagaagctaattcacttctgattcagcctttagaagttctggatcagaacttgattagtctgctcgagtgt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  173124 aggttttatacggcttctgccaaattctgcagaagctaattcacttctgattcagcctttagaagttctggatcagaacttgattagtctgctcgggtgt 173223  T
Q  117 gtaggagagcctgattctggttttgttgtggagggtctgaggaggatttattgcacaatgcattgggtgcagagctgaaatattaaagcaccacctcttt 216  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||    
T  173224 gtaggagagcctgattctggttttgttgtggagggcctgaggaggatttattgcacaatgtagtgggtgcagaactgaaatattaaagcaccacctcttt 173323  T
Q  217 gcaagaggcagctttggtgagaaattattgtagtgagagtatgaattgaggcatgtatttataac-----------aatctgaacatttcaaataactcc 305  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||           ||| |||||||||||||||||||     
T  173324 gcaagaggcagctttggtgagaaattcttgtagtgagagtatgaattgaggcatgtatttataaccatctgaattgaatttgaacatttcaaataactcg 173423  T
Q  306 acaagtttgttatctgaatgtaacaatgatgttaatatgaagggaaaagaggcctgtgataaaatagaaacannnnnnnnnnnnnnaaaagacaatgttc 405  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||| | |||||||||||              || |||||||||||    
T  173424 acaagtttgttatctgaatgtaacaatgatgttaatatcaagtgaaaagaggcccgtggtgaaatagaaacatttttttttttaaaaatagacaatgttc 173523  T
Q  406 tatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaaccatac 505  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| || |||||||||| ||||||| |||||||||||||||||| |    
T  173524 tatttaaattttttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaggtaaaaatcactaccgtatacgtgaggaacctcaaaccatcc 173623  T
Q  506 tcctaatagacctaaaatagaaaaacatctacttaacaccaaaaggaagaggactcaattctaataggcct 576  Q
    |||               | ||||||| ||||||||||||||||| |||||| ||||||||||||||||||    
T  173624 tcc--------------cataaaaacacctacttaacaccaaaagcaagaggtctcaattctaataggcct 173680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 634 - 687
Target Start/End: Original strand, 173738 - 173790
Alignment:
Q  634 tctgatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataaga 687  Q
    ||||||||| |||| |||||||| |||||||||| |||||||||||||||||||    
T  173738 tctgatggaatgatggtgatgaagcgcgtggtat-agagaaaaagagaataaga 173790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 2e-42; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 398 - 502
Target Start/End: Original strand, 38547041 - 38547145
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctca 497  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||    
T  38547041 caatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgtggtacacccaaatgtgaaaatcactatcatatacatgaggaacctca 38547140  T
Q  498 aacca 502  Q
    |||||    
T  38547141 aacca 38547145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 39134726 - 39134832
Alignment:
Q  397 acaatgttctatttaaattttttaaaac-ataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacct 495  Q
    |||||||||||||||||||||||||||  ||||||||||||||| |||||||||| ||||||||||| |||| ||||||||  |||||||||||||||||    
T  39134726 acaatgttctatttaaattttttaaaaagataaatacaaggtgctgtatatatgcaatacacccaaaggtgataatcactactgtatacatgaggaacct 39134825  T
Q  496 caaacca 502  Q
    |||||||    
T  39134826 caaacca 39134832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 45758603 - 45758498
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||||||||||||||||||||||||| |||||| |||||||  |||||||||  ||||| ||||| ||||||||||||| |||||||||||||||||||    
T  45758603 acaatgttctatttaaattttttaaaagataaatgcaaggtgttgtatatatgttatacatccaaaggtgaaaatcactaccgtatacatgaggaacctc 45758504  T
Q  497 aaacca 502  Q
    ||||||    
T  45758503 aaacca 45758498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 398 - 494
Target Start/End: Complemental strand, 5316788 - 5316692
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||| |||| |||||||||||||||||    
T  5316788 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 5316692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 398 - 494
Target Start/End: Complemental strand, 23185535 - 23185439
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||| |||| |||||||||||||||||    
T  23185535 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgaggaacc 23185439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 392 - 494
Target Start/End: Original strand, 9173022 - 9173124
Alignment:
Q  392 aaaagacaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagga 491  Q
    |||| ||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| |||| ||||| |||||||| |||| ||||||||||||||    
T  9173022 aaaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgagga 9173121  T
Q  492 acc 494  Q
    |||    
T  9173122 acc 9173124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 392 - 494
Target Start/End: Original strand, 9181004 - 9181106
Alignment:
Q  392 aaaagacaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagga 491  Q
    |||| ||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| |||| ||||| |||||||| |||| ||||||||||||||    
T  9181004 aaaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgagga 9181103  T
Q  492 acc 494  Q
    |||    
T  9181104 acc 9181106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 6221786 - 6221682
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    |||||||||||||||||||||| |||| |||||||||| |||||||||||| ||| |||| | |||||||||||||| ||||||||| ||||||||||||    
T  6221786 acaatgttctatttaaattttt-aaaagataaatacaatgtgccgtatataagcggtacatcaaaatgtgaaaatcattatcgtatatatgaggaacctc 6221688  T
Q  497 aaacca 502  Q
    ||||||    
T  6221687 aaacca 6221682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 4971623 - 4971719
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||||||||| ||||||||||||| |||||||| | |||||||| |||| |||||||||||||||||    
T  4971623 caatgttctatttatattttttaaaagataaatacaaggtaccgtatatatgcggtacacccataagtgaaaatgactaccgtatacatgaggaacc 4971719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 400 - 496
Target Start/End: Complemental strand, 6771897 - 6771801
Alignment:
Q  400 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||| |||| |||||||| ||||||||||    
T  6771897 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacacgaggaacctc 6771801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 398 - 494
Target Start/End: Complemental strand, 27559745 - 27559649
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||| |||||| |||||||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  27559745 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 27559649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 400 - 494
Target Start/End: Complemental strand, 14146406 - 14146312
Alignment:
Q  400 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |  ||||||| |||| |||||||||||||||||    
T  14146406 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacc 14146312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 399 - 502
Target Start/End: Original strand, 43235774 - 43235879
Alignment:
Q  399 aatgttctatttaaatttttta--aaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    |||||||||||||||||||||   ||| ||||||||||| || ||||||||||   |||||||||| |||||||||||||||||||||||||||||||||    
T  43235774 aatgttctatttaaatttttttttaaagataaatacaagatgtcgtatatatgatgtacacccaaaggtgaaaatcactatcgtatacatgaggaacctc 43235873  T
Q  497 aaacca 502  Q
    ||||||    
T  43235874 aaacca 43235879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 1366883 - 1366979
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| ||||||||||  ||||||| |||| |||||||| ||||||||    
T  1366883 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagatgaaaatgactaccgtatacacgaggaacc 1366979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 398 - 494
Target Start/End: Complemental strand, 5027657 - 5027561
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||| |||| | |||| ||||||||||    
T  5027657 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatagatgaggaacc 5027561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 398 - 494
Target Start/End: Complemental strand, 44655849 - 44655753
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||||| | || ||||| |||| |||||||||||||||||    
T  44655849 caatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacc 44655753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 26804054 - 26803952
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    |||||| | |||||||||||||||||| ||||||||||| || ||||||||||||||||||   || ||||||||||||| |||||||||||| ||||||    
T  26804054 acaatgctatatttaaattttttaaaagataaatacaagatgtcgtatatatgcgatacac---aaggtgaaaatcactaccgtatacatgagaaacctc 26803958  T
Q  497 aaacca 502  Q
    ||||||    
T  26803957 aaacca 26803952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 33170873 - 33170754
Alignment:
Q  392 aaaagacaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagga 491  Q
    |||| |||||||| ||||||||||||||||||| ||||||||| |||  ||||||||||| |||||| ||  ||||||||||||| |||||||||||| |    
T  33170873 aaaaaacaatgttatatttaaattttttaaaacgtaaatacaatgtgttgtatatatgcggtacaccaaatggtgaaaatcactaccgtatacatgagaa 33170774  T
Q  492 acctcaaaccatactcctaa 511  Q
    |||| ||||||  |||||||    
T  33170773 accttaaaccaccctcctaa 33170754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 398 - 494
Target Start/End: Complemental strand, 17169064 - 17168968
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||| ||||||  ||||||||||| |||||||||| |||||||| |||| | |||||||||||||||    
T  17169064 caatgttctatttatattttttaaaagataaatataaggtgttgtatatatgcggtacacccaaaggtgaaaatgactaccatatacatgaggaacc 17168968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 398 - 494
Target Start/End: Complemental strand, 19955825 - 19955729
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    ||||| |||||||| ||||||||||| ||||||| ||||| ||||||||||||| |||||||||| |||||||| |||| |||||| ||||||||||    
T  19955825 caatgatctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgaggaacc 19955729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 398 - 485
Target Start/End: Original strand, 21740942 - 21741029
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtataca 485  Q
    |||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||| |||| | ||||||    
T  21740942 caatgttctatttgtattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccatataca 21741029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 399 - 493
Target Start/End: Original strand, 51607445 - 51607540
Alignment:
Q  399 aatgttctatttaaattttttaaaacataaatacaaggtg-ccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaac 493  Q
    |||||| |||||| ||||||||||| ||||||| |||||| ||||||||||||| |||||||||| |||||||| |||| ||||||||||||||||    
T  51607445 aatgttttatttatattttttaaaagataaatataaggtggccgtatatatgcggtacacccaaacgtgaaaatgactaccgtatacatgaggaac 51607540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 400 - 494
Target Start/End: Complemental strand, 3406524 - 3406430
Alignment:
Q  400 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||  ||||| |  | |||||||| |||| |||||||||||||||||    
T  3406524 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgaggaacc 3406430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 400 - 494
Target Start/End: Original strand, 3440296 - 3440390
Alignment:
Q  400 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||  ||||| |  | |||||||| |||| |||||||||||||||||    
T  3440296 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgaggaacc 3440390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 5533422 - 5533316
Alignment:
Q  397 acaatgttctatttaaatttttt-aaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacct 495  Q
    ||||| ||||||||||||||||| |||| ||||| |||||||||||||||||||   ||||  |||| ||||||||||||| ||||||||||||||| ||    
T  5533422 acaatattctatttaaatttttttaaaagataaacacaaggtgccgtatatatgatgtacaatcaaaggtgaaaatcactaccgtatacatgaggaaact 5533323  T
Q  496 caaacca 502  Q
    |||||||    
T  5533322 caaacca 5533316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 401 - 503
Target Start/End: Complemental strand, 38853627 - 38853526
Alignment:
Q  401 tgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaac 500  Q
    ||||||||||||||||||||||  |||||||||||||| ||||||||||   || | ||||| ||||||||||||| ||||||||||| |||||||||||    
T  38853627 tgttctatttaaattttttaaatgataaatacaaggtgtcgtatatatgttgtatatccaaaggtgaaaatcactaccgtatacatga-gaacctcaaac 38853529  T
Q  501 cat 503  Q
    |||    
T  38853528 cat 38853526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 398 - 496
Target Start/End: Complemental strand, 50881538 - 50881440
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    |||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||| | | | |||||||| ||||  ||||||||||||||||||    
T  50881538 caatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacatctagaggtgaaaatgactacagtatacatgaggaacctc 50881440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 399 - 496
Target Start/End: Original strand, 40501796 - 40501893
Alignment:
Q  399 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    |||| |||||||| ||||||||||| ||||||| |||||| |||||||||||| |||||||||| || ||||| |||| ||||||||||| |||||||    
T  40501796 aatgatctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgaagaacctc 40501893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 400 - 492
Target Start/End: Complemental strand, 16140161 - 16140069
Alignment:
Q  400 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaa 492  Q
    |||||||||||| ||||||||||| ||||||||||||||  ||||||||||| |||||| | | |||||||| |||| |||||||||||||||    
T  16140161 atgttctatttatattttttaaaagataaatacaaggtgttgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaa 16140069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 10925957 - 10926060
Alignment:
Q  397 acaatgttctatttaaat-tttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacct 495  Q
    ||||| |||||||||| | ||||||||| |||||||||| |||||||||||||| ||| || |||||  |||||||||||| |||||||||||||| |||    
T  10925957 acaatattctatttaagtatttttaaaaaataaatacaatgtgccgtatatatgagatgcatccaaagatgaaaatcactaccgtatacatgaggatcct 10926056  T
Q  496 caaa 499  Q
    ||||    
T  10926057 caaa 10926060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 397 - 495
Target Start/End: Complemental strand, 50146405 - 50146307
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacct 495  Q
    ||||||||||||||||| ||||| ||| |||||| ||||||||||| |||||| |||| ||||||| || ||||||| || | ||||||||||||||||    
T  50146405 acaatgttctatttaaactttttgaaagataaatgcaaggtgccgtgtatatgtgatagacccaaaggtaaaaatcattaccctatacatgaggaacct 50146307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 400 - 494
Target Start/End: Original strand, 41697144 - 41697238
Alignment:
Q  400 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||| ||||||||||| |||||||||| ||  |||||||||||  |||| ||| | |||||||| |||| |||||||||||||||||    
T  41697144 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcagtacatccagaagtgaaaatgactaccgtatacatgaggaacc 41697238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 13913485 - 13913583
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccg--tatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    ||||| |||||||| ||||||||||| ||||||| ||| |||||  |||||||||| |||||| ||| |||||||| |||| |||||||||||| ||||    
T  13913485 caatgatctatttatattttttaaaagataaatataagttgccgggtatatatgcggtacacctaaaagtgaaaatgactaccgtatacatgagaaacc 13913583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 399 - 481
Target Start/End: Complemental strand, 35392376 - 35392295
Alignment:
Q  399 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgta 481  Q
    |||||| ||||||||||||||||   ||||||||||||||||||||||||||| || | ||||| ||||||||||||| ||||    
T  35392376 aatgttttatttaaattttttaagg-ataaatacaaggtgccgtatatatgcggtatatccaaaggtgaaaatcactaccgta 35392295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 398 - 471
Target Start/End: Complemental strand, 6889719 - 6889646
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaat 471  Q
    |||||||||||||| ||||||||||| |||||||||| ||  |||||||||||| |||| ||| | ||||||||    
T  6889719 caatgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacatccagaggtgaaaat 6889646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 398 - 471
Target Start/End: Complemental strand, 6891565 - 6891492
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaat 471  Q
    |||||||||||||| ||||||||||| |||||||||| ||  |||||||||||| |||| ||| | ||||||||    
T  6891565 caatgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacatccagaggtgaaaat 6891492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 398 - 471
Target Start/End: Original strand, 22865466 - 22865538
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaat 471  Q
    |||||||||||||| ||||||||||| ||||||||||| |||  ||||||| || |||||||||| ||||||||    
T  22865466 caatgttctatttatattttttaaaagataaatacaagatgctctatatat-cggtacacccaaaggtgaaaat 22865538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 526 - 576
Target Start/End: Original strand, 43235889 - 43235939
Alignment:
Q  526 aaaaacatctacttaacaccaaaaggaagaggactcaattctaataggcct 576  Q
    ||||||||| || |||||||||||| || ||||||||||||||||||||||    
T  43235889 aaaaacatcaacctaacaccaaaagcaataggactcaattctaataggcct 43235939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 634 - 686
Target Start/End: Original strand, 10926171 - 10926223
Alignment:
Q  634 tctgatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataag 686  Q
    |||||||||||||| |||||| ||||| ||||| |||||| ||||||||||||    
T  10926171 tctgatggagtgatggtgatggaacgcatggtaccagagagaaagagaataag 10926223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 398 - 441
Target Start/End: Original strand, 27906734 - 27906777
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccg 441  Q
    |||||||| ||||| ||||||||||| |||||||||||||||||    
T  27906734 caatgttccatttatattttttaaaagataaatacaaggtgccg 27906777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 451
Target Start/End: Original strand, 17322627 - 17322681
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcg 451  Q
    ||||||||||||||| ||||||| ||| |||||||||| ||  ||||||||||||    
T  17322627 acaatgttctatttatatttttttaaagataaatacaatgtagcgtatatatgcg 17322681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 634 - 679
Target Start/End: Original strand, 39134950 - 39134995
Alignment:
Q  634 tctgatggagtgattgtgatgaaacgcgtggtatcagagaaaaaga 679  Q
    |||||||||||||| |||||| ||||| |||||||||||| |||||    
T  39134950 tctgatggagtgatggtgatggaacgcatggtatcagagagaaaga 39134995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 86; Significance: 1e-40; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 263 - 368
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  263 acaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaatgtgaaaatcactaccgtatacatgatgaacctc 362  T
Q  497 aaacca 502  Q
    ||||||    
T  363 aaacca 368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 86; Significance: 1e-40; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 39023 - 38918
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||    
T  39023 acaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacacacaaatgtgaaaatcactaccgtatatatgaggaacctc 38924  T
Q  497 aaacca 502  Q
    ||||||    
T  38923 aaacca 38918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 1e-40; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 15167420 - 15167525
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||||||||||||||||||||||||| ||||||| || |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15167420 acaatgttctatttaaattttttaaaagataaatataaagtgttgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 15167519  T
Q  497 aaacca 502  Q
    ||||||    
T  15167520 aaacca 15167525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 399 - 502
Target Start/End: Complemental strand, 15078854 - 15078751
Alignment:
Q  399 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 498  Q
    ||||||||||||||| ||||||||| ||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  15078854 aatgttctatttaaaatttttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 15078755  T
Q  499 acca 502  Q
    ||||    
T  15078754 acca 15078751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 7944527 - 7944632
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||   |||||||||| ||||||||||||| |||||||||||||||||||    
T  7944527 acaatgttttatttaaattttttaaaaaataaatacaaggtgccgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgaggaacctc 7944626  T
Q  497 aaacca 502  Q
    ||||||    
T  7944627 aaacca 7944632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 399 - 502
Target Start/End: Original strand, 25561502 - 25561603
Alignment:
Q  399 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 498  Q
    |||||||||||||||| |||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||    
T  25561502 aatgttctatttaaatcttttaaag-ataaatacaaggtgccgtatatatgcgata-acccaaatgtgaaaatcactgccgtatacatgaggaacctcaa 25561599  T
Q  499 acca 502  Q
    ||||    
T  25561600 acca 25561603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 399 - 501
Target Start/End: Complemental strand, 8103008 - 8102906
Alignment:
Q  399 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 498  Q
    |||||| |||||||||||||||||| ||||||||||||||| ||||||||||| |||||| ||| |||||||||| || |||||||||||||||||||||    
T  8103008 aatgttatatttaaattttttaaaagataaatacaaggtgcagtatatatgcggtacacctaaaggtgaaaatcattaccgtatacatgaggaacctcaa 8102909  T
Q  499 acc 501  Q
    |||    
T  8102908 acc 8102906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 23798267 - 23798363
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  23798267 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacc 23798363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 398 - 494
Target Start/End: Complemental strand, 45475914 - 45475818
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||| |||| |||||||||||||||||    
T  45475914 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgaggaacc 45475818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 397 - 500
Target Start/End: Complemental strand, 8646303 - 8646201
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||||||||||||||||||||||||| |||||||||||||  ||||||||||| |||||| |||||||||||||||||| ||||||||| || ||||||    
T  8646303 acaatgttctatttaaattttttaaaagataaatacaaggtatcgtatatatgc-atacacgcaaatgtgaaaatcactaccgtatacataagaaacctc 8646205  T
Q  497 aaac 500  Q
    ||||    
T  8646204 aaac 8646201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 400 - 502
Target Start/End: Complemental strand, 5721654 - 5721552
Alignment:
Q  400 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaa 499  Q
    ||||||||||||| |||||||||| |||||||||||||||| ||||||  || |||||||||| ||||||||||||| ||||||| ||||||||||||||    
T  5721654 atgttctatttaatttttttaaaagataaatacaaggtgccctatataatcggtacacccaaaagtgaaaatcactaccgtatacctgaggaacctcaaa 5721555  T
Q  500 cca 502  Q
    |||    
T  5721554 cca 5721552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 41677178 - 41677284
Alignment:
Q  397 acaatgttctatttaaatttttt-aaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacct 495  Q
    ||||||||||||||||||||||| |||| ||||||||||| || ||||||||||||||||| | ||| |||||||||||||  |||||||||||||||||    
T  41677178 acaatgttctatttaaatttttttaaaagataaatacaagatgtcgtatatatgcgatacatctaaaggtgaaaatcactactgtatacatgaggaacct 41677277  T
Q  496 caaacca 502  Q
    |||||||    
T  41677278 caaacca 41677284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 11290282 - 11290177
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    |||||||| |||||||||||||||||| |||||||||||||| ||||||||||   ||||| |||| ||||||||||||| |||||||||||| ||||||    
T  11290282 acaatgttttatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacactcaaaggtgaaaatcactaccgtatacatgagcaacctc 11290183  T
Q  497 aaacca 502  Q
    ||||||    
T  11290182 aaacca 11290177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 39332410 - 39332515
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    |||||||||||||||| ||||| |||| |||||||||||||| | |||||| ||| |||| ||||| ||||||||||||| |||||||||||||||||||    
T  39332410 acaatgttctatttaattttttaaaaagataaatacaaggtgtcatatataagcggtacatccaaaggtgaaaatcactaccgtatacatgaggaacctc 39332509  T
Q  497 aaacca 502  Q
    ||||||    
T  39332510 aaacca 39332515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 23606635 - 23606731
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||| || ||||| |||| |||||||||||||||||    
T  23606635 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgaggaacc 23606731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 398 - 494
Target Start/End: Complemental strand, 30883426 - 30883330
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| |||||||||| |||||||||||||||| |||||||| | |||||||| |||| |||||||||||||||||    
T  30883426 caatgttctatttatattttttaaaagataaatacaatgtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 30883330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 392 - 494
Target Start/End: Complemental strand, 10917494 - 10917392
Alignment:
Q  392 aaaagacaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagga 491  Q
    |||| |||||| |||||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||||| |||| | ||||||||||||    
T  10917494 aaaaaacaatgatctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccttatacatgagga 10917395  T
Q  492 acc 494  Q
    |||    
T  10917394 acc 10917392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 5973112 - 5973217
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||   |||||||| |  ||||||||| || |||||||| ||||||||||    
T  5973112 acaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacacccatagatgaaaatcattaccgtatacacgaggaacctc 5973211  T
Q  497 aaacca 502  Q
    ||||||    
T  5973212 aaacca 5973217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 23941096 - 23941201
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    |||||||| |||||||||||||||||| |||||||||||||| | |||||| ||||||||||||||  |||||||||| ||| |||| | ||||||||||    
T  23941096 acaatgttttatttaaattttttaaaagataaatacaaggtgtcatatataagcgatacacccaaagatgaaaatcacaatcatatatacgaggaacctc 23941195  T
Q  497 aaacca 502  Q
    ||||||    
T  23941196 aaacca 23941201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 2952227 - 2952323
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| |||||||||| |||||||||||||||| |||||||| |  ||||||| |||| |||||||||||||||||    
T  2952227 caatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacc 2952323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 5860750 - 5860846
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||| |||| | |||||||||| ||||    
T  5860750 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgagaaacc 5860846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 414 - 502
Target Start/End: Complemental strand, 5942777 - 5942689
Alignment:
Q  414 ttttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaacca 502  Q
    |||||||||| ||||||||||| || ||||||| |||| |||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  5942777 ttttttaaaagataaatacaagatgtcgtatatgtgcggtacacccaaaggtgaaaatcactaccgtatacatgaggaacctcaaacca 5942689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 13534693 - 13534788
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||||||||||| |||||||| | |||||||| |||| |||||||||||||||||    
T  13534693 caatgttctatttatattttttaaaagataaatacaag-tgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 13534788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 13624233 - 13624328
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||||||||||| |||||||| | |||||||| |||| |||||||||||||||||    
T  13624233 caatgttctatttatattttttaaaagataaatacaag-tgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 13624328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 398 - 494
Target Start/End: Complemental strand, 42600879 - 42600783
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    ||||| |||||||| ||||||||||| ||||||| ||||||||||||||||| | |||||||||| |||||||| |||| |||||||||||||||||    
T  42600879 caatgatctatttatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 42600783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 400 - 494
Target Start/End: Original strand, 37430166 - 37430260
Alignment:
Q  400 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||| | | || ||||| |||| |||||||||||||||||    
T  37430166 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcgttacacctagaggtaaaaatgactaccgtatacatgaggaacc 37430260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 397 - 494
Target Start/End: Complemental strand, 41879279 - 41879182
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    ||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||| |||| ||||| |||||||| |||| || ||||||||| ||||    
T  41879279 acaatgttctatttatattttttaaaagataaatacaaggtaccgtatatatgcggtacatccaaaggtgaaaatgactaccgaatacatgagaaacc 41879182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 14509988 - 14510092
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtg-aaaatcactatcgtatacatgaggaacct 495  Q
    ||||||||| ||||||||||||||||| | ||||| |||||| ||||||||  || |||||||||||||| |||||||||| |||||||||||| |||||    
T  14509988 acaatgttcaatttaaattttttaaaagacaaatataaggtgtcgtatata--cggtacacccaaatgtgaaaaatcactaccgtatacatgagtaacct 14510085  T
Q  496 caaacca 502  Q
    |||||||    
T  14510086 caaacca 14510092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 397 - 474
Target Start/End: Original strand, 30674408 - 30674485
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcac 474  Q
    |||||||||||||||||| |||||||| ||||||| |||||| |||||||||||||||||| |||| |||||||||||    
T  30674408 acaatgttctatttaaatgttttaaaagataaatataaggtgtcgtatatatgcgatacactcaaaggtgaaaatcac 30674485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 400 - 502
Target Start/End: Original strand, 34789870 - 34789972
Alignment:
Q  400 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaa 499  Q
    ||||||||||||||| | |||||| ||||||||||| || ||||||||||   |||||||||| ||||||||||||| |||||||||||| ||  |||||    
T  34789870 atgttctatttaaatctcttaaaagataaatacaagatgtcgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgagaaatatcaaa 34789969  T
Q  500 cca 502  Q
    |||    
T  34789970 cca 34789972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 405 - 494
Target Start/End: Original strand, 3048530 - 3048619
Alignment:
Q  405 ctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||| |||||| | |  ||||||| |||| |||||||| ||||||||    
T  3048530 ctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagagatgaaaatgactaccgtatacacgaggaacc 3048619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 34048710 - 34048817
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccg--tatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||||||  |||||||| |||||||||| ||| ||  |||||||  ||||||||||||  ||||||||||||  ||||||||||||| ||    
T  34048710 acaatgttctatttaaacattttaaaagataaatacaatgtgtcgtatatatatatgatacacccaaagatgaaaatcactactgtatacatgaggatcc 34048809  T
Q  495 tcaaacca 502  Q
    ||| ||||    
T  34048810 tcatacca 34048817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 636 - 685
Target Start/End: Complemental strand, 8646073 - 8646024
Alignment:
Q  636 tgatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataa 685  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| |||||    
T  8646073 tgatggagtgatagtgatgaaacgcgtggtatcagagagaaagaaaataa 8646024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 437
Target Start/End: Complemental strand, 9108591 - 9108551
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggt 437  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  9108591 acaatgttctatttaaattttttaaaagataaatacaaggt 9108551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 34868184 - 34868223
Alignment:
Q  399 aatgttctatttaaattttttaaaacataaatacaaggtg 438  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  34868184 aatgttctatttaaattttttaaaagataaatacaaggtg 34868223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 526 - 576
Target Start/End: Complemental strand, 8102897 - 8102847
Alignment:
Q  526 aaaaacatctacttaacaccaaaaggaagaggactcaattctaataggcct 576  Q
    ||||||||| || |||||||||||| |||||||| ||||||||||||||||    
T  8102897 aaaaacatccacctaacaccaaaagcaagaggacccaattctaataggcct 8102847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 637 - 685
Target Start/End: Original strand, 34048938 - 34048986
Alignment:
Q  637 gatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataa 685  Q
    ||||||||||| |||||| ||||||||||||| |||| |||||||||||    
T  34048938 gatggagtgatggtgatggaacgcgtggtatcggagagaaagagaataa 34048986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 539 - 576
Target Start/End: Original strand, 15167546 - 15167583
Alignment:
Q  539 taacaccaaaaggaagaggactcaattctaataggcct 576  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  15167546 taacaccaaaagtaagaggacccaattctaataggcct 15167583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 539 - 576
Target Start/End: Original strand, 25561639 - 25561676
Alignment:
Q  539 taacaccaaaaggaagaggactcaattctaataggcct 576  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  25561639 taacaccaaaagcaagaggacccaattctaataggcct 25561676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320 (Bit Score: 84; Significance: 2e-39; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 399 - 502
Target Start/End: Complemental strand, 1450 - 1347
Alignment:
Q  399 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 498  Q
    ||||||||||||||| ||||||||| ||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  1450 aatgttctatttaaaatttttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 1351  T
Q  499 acca 502  Q
    ||||    
T  1350 acca 1347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 2e-38; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 2477589 - 2477694
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||||||| ||||||||||||||||| |||||||||||||| | ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  2477589 acaatgttcaatttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctc 2477688  T
Q  497 aaacca 502  Q
    ||||||    
T  2477689 aaacca 2477694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 399 - 494
Target Start/End: Complemental strand, 33774216 - 33774121
Alignment:
Q  399 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||    
T  33774216 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaatgtgaaaatgactaccgtatacatgaggaacc 33774121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 398 - 494
Target Start/End: Complemental strand, 28075883 - 28075787
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||    
T  28075883 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaacc 28075787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 13727405 - 13727501
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||| |||| |||||||||||||||||    
T  13727405 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 13727501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 398 - 494
Target Start/End: Complemental strand, 17354054 - 17353958
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||| |||||| |||||||||||| ||||||||||||||||||| |||||||||||||||| |||||    
T  17354054 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaatgtgaaaatgactatcgtatacatgatgaacc 17353958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 20711726 - 20711822
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  20711726 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 20711822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 398 - 494
Target Start/End: Complemental strand, 21479594 - 21479498
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||| |||| |||||||||||||||||    
T  21479594 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 21479498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 399 - 500
Target Start/End: Complemental strand, 20611889 - 20611788
Alignment:
Q  399 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 498  Q
    ||||||||| ||||||||||||||  |||||||||||||| ||||||||| ||| ||| ||||| ||||||||||||| |||||||||||||||||||||    
T  20611889 aatgttctacttaaattttttaaacgataaatacaaggtgtcgtatatatacgacacatccaaaggtgaaaatcactaccgtatacatgaggaacctcaa 20611790  T
Q  499 ac 500  Q
    ||    
T  20611789 ac 20611788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 27788694 - 27788790
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||| ||||||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  27788694 caattttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 27788790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 403 - 502
Target Start/End: Original strand, 21183686 - 21183785
Alignment:
Q  403 ttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaacca 502  Q
    ||||||||||||||||||||| |||||||||| ||  |||||||||| | ||||||||||  |||||||||||| |||||||||||||||||||||||||    
T  21183686 ttctatttaaattttttaaaagataaatacaaagtagcgtatatatgtggtacacccaaagttgaaaatcactaccgtatacatgaggaacctcaaacca 21183785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 398 - 493
Target Start/End: Complemental strand, 21280645 - 21280550
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaac 493  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | || ||||| |||| ||||||||||||||||    
T  21280645 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaac 21280550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 398 - 496
Target Start/End: Complemental strand, 34397957 - 34397859
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    |||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||| ||| || ||||| ||||||||| ||||||||||||||    
T  34397957 caatgttctatttatattttttaaaagataaatacaaggtgacgtatatatgcggtacacctaaaggtaaaaatgactatcgtaaacatgaggaacctc 34397859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 19737698 - 19737794
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||| ||| ||||||||||||||||||||||||||| |||||| | | |||||||| |||| |||||||||||||||||    
T  19737698 caatgttctatttatatttttttaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaacc 19737794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 400 - 494
Target Start/End: Original strand, 24711007 - 24711101
Alignment:
Q  400 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||| | ||||| || | |||||||| |||| |||||||||||||||||    
T  24711007 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacactcagaggtgaaaatgactaccgtatacatgaggaacc 24711101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 6159539 - 6159434
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||||||||||||| ||||||||||| |||||||||| ||| |||||||||||| ||||  |||| ||| ||||||||| |||||| || |||||||||    
T  6159539 acaatgttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtacattcaaaggtggaaatcactaccgtatatataaggaacctc 6159440  T
Q  497 aaacca 502  Q
    ||||||    
T  6159439 aaacca 6159434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 397 - 476
Target Start/End: Complemental strand, 30121863 - 30121784
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcacta 476  Q
    |||||||| |||||||||||||||||| |||||||||||||| | ||||||||||||||| ||||| |||||||||||||    
T  30121863 acaatgttttatttaaattttttaaaaaataaatacaaggtgtcatatatatgcgatacatccaaaggtgaaaatcacta 30121784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 398 - 490
Target Start/End: Original strand, 1155855 - 1155947
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagg 490  Q
    |||||||||||||| ||||||||||| |||||||||||||| | |||||||||| |||| ||| | |||||||| |||| |||||||||||||    
T  1155855 caatgttctatttatattttttaaaagataaatacaaggtgtcatatatatgcggtacatccagaggtgaaaatgactaccgtatacatgagg 1155947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 400 - 494
Target Start/End: Original strand, 30832532 - 30832626
Alignment:
Q  400 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||||||| | |||||||| |  ||||||| |||| ||||| |||||||||||    
T  30832532 atgttctatttacattttttaaaaaataaatacaagatgccgtatatatgtggtacacccagagatgaaaatgactaccgtatgcatgaggaacc 30832626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 286 - 343
Target Start/End: Original strand, 31094072 - 31094129
Alignment:
Q  286 tgaacatttcaaataactccacaagtttgttatctgaatgtaacaatgatgttaatat 343  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  31094072 tgaacatttcaaacaactccacaagtttgttatctaaatgtaacaatgatgttaatat 31094129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 415 - 502
Target Start/End: Complemental strand, 4037031 - 4036944
Alignment:
Q  415 tttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaacca 502  Q
    ||||||| | ||||||||||||||||||||||||  | |||||||||| || || ||||||| |||||| ||||||||| ||||||||    
T  4037031 tttttaagagataaatacaaggtgccgtatatatatggtacacccaaaggtaaagatcactaccgtatatatgaggaacttcaaacca 4036944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 398 - 471
Target Start/End: Original strand, 27314184 - 27314258
Alignment:
Q  398 caatgttctatttaaattttttaaaac-ataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaat 471  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||||||||| ||||| || | ||||||||    
T  27314184 caatgttctatttatattttttaaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaat 27314258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 235230 - 235328
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgcc--gtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    ||||| |||||||| ||||||||||| ||||||| ||||||||  |||||||| |  ||||||||||  ||||||| |||| |||||||||||| ||||    
T  235230 caatgatctatttatattttttaaaagataaatataaggtgccgggtatatataccgtacacccaaagatgaaaatgactaccgtatacatgagaaacc 235328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 286 - 325
Target Start/End: Complemental strand, 31051230 - 31051191
Alignment:
Q  286 tgaacatttcaaataactccacaagtttgttatctgaatg 325  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  31051230 tgaacatttcaaataactccacaagtttgttatctaaatg 31051191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 228
Target Start/End: Original strand, 31093573 - 31093652
Alignment:
Q  146 ggagggtctgaggaggatttattgcacaatgcattgggtgcagagctgaaatattaaagcaccacctctttgcaagaggcagc 228  Q
    |||||| ||| || ||||||||||||||||| | |||||||  || | |||||||||||   |||||||||||||||||||||    
T  31093573 ggagggcctggggcggatttattgcacaatgtagtgggtgcgtagttaaaatattaaag---cacctctttgcaagaggcagc 31093652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 524 - 574
Target Start/End: Original strand, 2477702 - 2477752
Alignment:
Q  524 agaaaaacatctacttaacaccaaaaggaagaggactcaattctaataggc 574  Q
    ||||||||| | || |||||| ||||| |||||||||||||||||||||||    
T  2477702 agaaaaacacccacctaacacaaaaagcaagaggactcaattctaataggc 2477752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 2e-38; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 27112133 - 27112028
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||||||| ||||||||||||||||| |||||||||||||| | ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  27112133 acaatgttcaatttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctc 27112034  T
Q  497 aaacca 502  Q
    ||||||    
T  27112033 aaacca 27112028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 36118462 - 36118567
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||||    
T  36118462 acaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacacccaaatatgaaaatcactaccgtatacatgagtaacctc 36118561  T
Q  497 aaacca 502  Q
     |||||    
T  36118562 taacca 36118567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 52468389 - 52468284
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||| ||||| ||||||||||||| ||||| |||||||||||||    
T  52468389 acaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgttatacatccaaaggtgaaaatcactaccgtatgcatgaggaacctc 52468290  T
Q  497 aaacca 502  Q
    ||||||    
T  52468289 aaacca 52468284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 10042004 - 10042106
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||| |||| |||||||| ||||||||||||||||| |||||||| ||||||||||    
T  10042004 acaatgttctatttaaatttttaaaaaaataaatacaaggtgccgtatgtatgtgatacacctaaatgtgaaaatcactaccgtatacaggaggaacctc 10042103  T
Q  497 aaa 499  Q
    |||    
T  10042104 aaa 10042106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 398 - 494
Target Start/End: Complemental strand, 54780879 - 54780783
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  54780879 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 54780783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 397 - 500
Target Start/End: Original strand, 2135325 - 2135428
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||| || || |||||||||||||| ||||||||||||    
T  2135325 acaatattctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacatccaaaggtaaacatcactatcgtatatatgaggaacctc 2135424  T
Q  497 aaac 500  Q
    ||||    
T  2135425 aaac 2135428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 397 - 500
Target Start/End: Complemental strand, 24397037 - 24396934
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||| || |||||||||||||||||| ||||||| ||||||| ||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||    
T  24397037 acaatattttatttaaattttttaaaagataaatataaggtgcagtatatatgtgatacactcaaaggtgaaaatcactatcgtatacatgaggaacctc 24396938  T
Q  497 aaac 500  Q
    ||||    
T  24396937 aaac 24396934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 397 - 488
Target Start/End: Complemental strand, 36178775 - 36178684
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatga 488  Q
    ||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||    
T  36178775 acaatgttctatttaaattatttaaaagataaatacaaggtgtcgtatatatgcgatacacccaaatgtgaaaatcactaccttatacatga 36178684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 413 - 499
Target Start/End: Original strand, 4167911 - 4167997
Alignment:
Q  413 attttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaa 499  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||    
T  4167911 attttttaaaagataaatacaaggtgccgtatatatgcgatacacccaaaggtgaaaatcactaccttatacatgaggaacctcaaa 4167997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 38209596 - 38209692
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||| |||| |||||||||||||||||    
T  38209596 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 38209692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 43455536 - 43455632
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  43455536 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 43455632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 399 - 494
Target Start/End: Original strand, 37777229 - 37777324
Alignment:
Q  399 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    ||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  37777229 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 37777324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 397 - 494
Target Start/End: Original strand, 2790745 - 2790842
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    ||||||||||||||| ||||||||||| ||||||| ||||| ||||||||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  2790745 acaatgttctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 2790842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 36362875 - 36362979
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    |||||| ||| |||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||| | ||||||| |||||||||    
T  36362875 acaatgctctgtttaaattttttaaaagataaatacaaagtgccgtatatatgcaatacacccaaatgtggaaatcactaccatatacat-aggaacctc 36362973  T
Q  497 aaacca 502  Q
    ||||||    
T  36362974 aaacca 36362979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 45656278 - 45656173
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    |||||||| |||||||||||||||||| |||||| ||||||| | ||||||||||||| | ||||||||||||||||| | ||||||||||| |||||||    
T  45656278 acaatgttttatttaaattttttaaaagataaatgcaaggtgtcatatatatgcgataaatccaaatgtgaaaatcacgaacgtatacatgacgaacctc 45656179  T
Q  497 aaacca 502  Q
    ||||||    
T  45656178 aaacca 45656173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 397 - 494
Target Start/End: Complemental strand, 47129090 - 47128993
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | || ||||| |||| |||||||||||||||||    
T  47129090 acaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacc 47128993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 398 - 494
Target Start/End: Complemental strand, 10979002 - 10978906
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||||| | |||||||| |||| |||||||||||||||||    
T  10979002 caatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaagtgaaaatgactaccgtatacatgaggaacc 10978906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 398 - 494
Target Start/End: Complemental strand, 48209342 - 48209246
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||| || |||| |||||||||||| ||||    
T  48209342 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaatatgactaccgtatacatgagaaacc 48209246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 400 - 502
Target Start/End: Original strand, 37744916 - 37745019
Alignment:
Q  400 atgttctatttaaatttttt-aaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 498  Q
    |||||||||||||||||||| |||| ||||||| |||||| || |||||||||||||| ||||| ||||||||||||| ||||||| |||||||||||||    
T  37744916 atgttctatttaaatttttttaaaagataaatataaggtgtcgcatatatgcgatacatccaaaggtgaaaatcactaccgtatacttgaggaacctcaa 37745015  T
Q  499 acca 502  Q
    ||||    
T  37745016 acca 37745019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 398 - 502
Target Start/End: Original strand, 51691920 - 51692026
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacc--caaatgtgaaaatcactatcgtatacatgaggaacct 495  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||   ||| ||||||||||||| | |||||| || ||||||    
T  51691920 caatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgcggtacaccaaaaaaagtgaaaatcactaccatatacacgatgaacct 51692019  T
Q  496 caaacca 502  Q
    |||||||    
T  51692020 caaacca 51692026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 398 - 494
Target Start/End: Complemental strand, 34027681 - 34027585
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||| |||||| |||||||||||| |||||||||| |||||||| ||||  ||||||||||||||||    
T  34027681 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactacggtatacatgaggaacc 34027585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 34768579 - 34768675
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||| | |||||||| | || |||||||||||||||||    
T  34768579 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccagaggtgaaaatgattaccgtatacatgaggaacc 34768675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 392 - 494
Target Start/End: Original strand, 54083241 - 54083343
Alignment:
Q  392 aaaagacaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagga 491  Q
    |||| |||||| |||||||| ||||||||||| ||||||| ||||||||||||||||||| ||||||||||  | ||||| |||| ||||||||||||||    
T  54083241 aaaaaacaatgatctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagataaaaatgactaccgtatacatgagga 54083340  T
Q  492 acc 494  Q
    |||    
T  54083341 acc 54083343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 403 - 496
Target Start/End: Original strand, 5128852 - 5128945
Alignment:
Q  403 ttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||  | |||||| | |||||||| |||| |||||||||||||||||||    
T  5128852 ttctatttatattttttaaaagataaatacaaggtgccgtatatatgcagtgcacccagaggtgaaaatgactaccgtatacatgaggaacctc 5128945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 401 - 494
Target Start/End: Complemental strand, 13460306 - 13460213
Alignment:
Q  401 tgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    ||||||||||| ||||||||||| |||||||||||||| |||||||||||| || ||||| |||||||||| |||| ||||||||| |||||||    
T  13460306 tgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtatacccagatgtgaaaatgactaccgtatacataaggaacc 13460213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 398 - 495
Target Start/End: Original strand, 35779331 - 35779427
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacct 495  Q
    |||||||||||| | ||||||||||| |||||||||||||| |||||||||||| |||||||||| |||||||| | || ||||||||||||||||||    
T  35779331 caatgttctatt-atattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaacct 35779427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 39329396 - 39329501
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    |||||||||| |||||||||||||||| ||||||||||||||  ||||||||| ||||||||||||  ||||||||  || |||||||| ||||||| ||    
T  39329396 acaatgttctctttaaattttttaaaagataaatacaaggtgttgtatatatgtgatacacccaaagatgaaaatccataccgtatacaggaggaacatc 39329495  T
Q  497 aaacca 502  Q
    ||||||    
T  39329496 aaacca 39329501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 405 - 502
Target Start/End: Complemental strand, 40217327 - 40217230
Alignment:
Q  405 ctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaacca 502  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||||||||| |||||  ||||||||| || | |||||||||| ||||||||||||    
T  40217327 ctatttaaattttttaaaagataaatataaggtgtcgtatatatgcgatacatccaaagatgaaaatcattagcatatacatgagtaacctcaaacca 40217230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 398 - 486
Target Start/End: Complemental strand, 32128686 - 32128598
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacat 486  Q
    |||||||||||||| ||||||||||| ||||||| |||||| |||||||||||| |||||||||| |||||||| |||| |||||||||    
T  32128686 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacat 32128598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 400 - 488
Target Start/End: Complemental strand, 37514759 - 37514671
Alignment:
Q  400 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatga 488  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||| || | |||||||| |||| |||||||||||    
T  37514759 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatga 37514671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 400 - 494
Target Start/End: Complemental strand, 32915485 - 32915391
Alignment:
Q  400 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||| | |||||||| | || ||||| | || |||||||||||||||||    
T  32915485 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtaaaaatgattaccgtatacatgaggaacc 32915391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 398 - 496
Target Start/End: Original strand, 10428202 - 10428308
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacaccc--------aaatgtgaaaatcactatcgtatacatgag 489  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||        || ||||||||| |||| ||||||||||||    
T  10428202 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaattgtgaaaatgactaccgtatacatgag 10428301  T
Q  490 gaacctc 496  Q
    |||||||    
T  10428302 gaacctc 10428308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 397 - 478
Target Start/End: Original strand, 39655258 - 39655339
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatc 478  Q
    ||||||||||||||||||||||||||| |||||||||| || ||| ||||||||| |||||||||| |||||||||| ||||    
T  39655258 acaatgttctatttaaattttttaaaagataaatacaaagttccgcatatatgcggtacacccaaaggtgaaaatcattatc 39655339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 415 - 494
Target Start/End: Complemental strand, 40089601 - 40089522
Alignment:
Q  415 tttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    ||||||||| ||||||| ||||||||||||||||||| |||| ||||| |||||||| |||| |||||||||||||||||    
T  40089601 tttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacc 40089522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 398 - 494
Target Start/End: Complemental strand, 19498604 - 19498510
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||  ||||||| |||| ||||| |||||||| ||||  ||||||||||||||||    
T  19498604 caatgttctatttatattttttaaaagataaatataaggtgccgt--atatgcggtacagccaaaggtgaaaatgactactgtatacatgaggaacc 19498510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 397 - 492
Target Start/End: Complemental strand, 35465209 - 35465115
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaa 492  Q
    |||||||| |||||| |||||||| || ||||||| ||||||| ||||||||||| |||||| ||| |||||||| |||| |||||||||||||||    
T  35465209 acaatgttatatttatattttttacaagataaataaaaggtgc-gtatatatgcggtacacctaaaagtgaaaataactaccgtatacatgaggaa 35465115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 400 - 494
Target Start/End: Complemental strand, 1105632 - 1105538
Alignment:
Q  400 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||| ||||||||||| |||||||||||||  |||||||||||| |||||| | | |||||||| |||| | |||||||||| ||||    
T  1105632 atgttctatttatattttttaaaagataaatacaaggtatcgtatatatgcggtacacctagaggtgaaaatgactaccatatacatgagcaacc 1105538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 398 - 460
Target Start/End: Complemental strand, 17679502 - 17679440
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacaccca 460  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  17679502 caatattctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacaccca 17679440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 398 - 471
Target Start/End: Complemental strand, 51964813 - 51964737
Alignment:
Q  398 caatgttctatttaaatttttt---aaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaat 471  Q
    |||||||||||||| |||||||   |||| |||||||||||||||||||||||||||||||||||| | ||||||||    
T  51964813 caatgttctatttatattttttttaaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaat 51964737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 398 - 494
Target Start/End: Complemental strand, 16845124 - 16845027
Alignment:
Q  398 caatgttctatttaaatttttt-aaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||| |||| ||||||| |||||| ||||||||||   |||||||||  |||||||| |||| |||||||||||||||||    
T  16845124 caatgttctatttatatttttttaaaagataaatataaggtgtcgtatatatgtagtacacccaacggtgaaaatgactaccgtatacatgaggaacc 16845027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 392 - 482
Target Start/End: Original strand, 16882394 - 16882484
Alignment:
Q  392 aaaagacaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtat 482  Q
    |||| ||||||||||||||| | ||||||||| ||||||| |||||||||| ||||| || |||||| ||| |||||||| |||| |||||    
T  16882394 aaaaaacaatgttctatttatactttttaaaagataaatataaggtgccgtgtatatacggtacaccaaaaggtgaaaatgactaccgtat 16882484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 401 - 502
Target Start/End: Complemental strand, 15735189 - 15735093
Alignment:
Q  401 tgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaac 500  Q
    ||||||||||||||||||||||| |||||||||||  | |||||||     ||||||| |||  ||||||||| || |||||||||||||||| ||||||    
T  15735189 tgttctatttaaattttttaaaagataaatacaagacgtcgtatat-----atacaccaaaaaatgaaaatcattaccgtatacatgaggaacttcaaac 15735095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 634 - 685
Target Start/End: Complemental strand, 52468166 - 52468115
Alignment:
Q  634 tctgatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataa 685  Q
    |||||||||||||| |||||| |||||||||||||||||| |||||||||||    
T  52468166 tctgatggagtgatggtgatggaacgcgtggtatcagagagaaagagaataa 52468115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 406 - 450
Target Start/End: Original strand, 29425187 - 29425231
Alignment:
Q  406 tatttaaattttttaaaacataaatacaaggtgccgtatatatgc 450  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||    
T  29425187 tatttaaattttttaaaaaataaatataaggtgccgtatatatgc 29425231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 398 - 456
Target Start/End: Original strand, 9578669 - 9578728
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggt-gccgtatatatgcgataca 456  Q
    |||||||||||||| ||||||||||| ||||||||||||| ||| |||||||||| ||||    
T  9578669 caatgttctatttatattttttaaaagataaatacaaggtagccatatatatgcggtaca 9578728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 397 - 435
Target Start/End: Complemental strand, 24614056 - 24614018
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaag 435  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  24614056 acaatgttctatttaaattttttaaaagataaatacaag 24614018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 526 - 576
Target Start/End: Original strand, 30507191 - 30507241
Alignment:
Q  526 aaaaacatctacttaacaccaaaaggaagaggactcaattctaataggcct 576  Q
    ||||||||| || |||||||||||| |||||||||||||||| ||||||||    
T  30507191 aaaaacatccacctaacaccaaaagcaagaggactcaattcttataggcct 30507241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 398 - 471
Target Start/End: Original strand, 16922334 - 16922407
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaat 471  Q
    |||||||||||||| ||||||||||| ||||||| || ||| |||||||||||  ||  |||||| ||||||||    
T  16922334 caatgttctatttatattttttaaaagataaatataaagtgtcgtatatatgcagtatccccaaaggtgaaaat 16922407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 398 - 446
Target Start/End: Original strand, 23508515 - 23508564
Alignment:
Q  398 caatgttctattta-aattttttaaaacataaatacaaggtgccgtatat 446  Q
    |||||||||||||| |||||||||||| |||||||||||||| |||||||    
T  23508515 caatgttctatttataattttttaaaagataaatacaaggtgtcgtatat 23508564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 433
Target Start/End: Original strand, 30507126 - 30507162
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaataca 433  Q
    ||||||||||||||||||||||||||| |||||||||    
T  30507126 acaatgttctatttaaattttttaaaagataaataca 30507162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 398 - 441
Target Start/End: Complemental strand, 55255359 - 55255316
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccg 441  Q
    |||||||| ||||| ||||||||||| |||||||||||||||||    
T  55255359 caatgttccatttatattttttaaaagataaatacaaggtgccg 55255316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 524 - 574
Target Start/End: Complemental strand, 27112020 - 27111970
Alignment:
Q  524 agaaaaacatctacttaacaccaaaaggaagaggactcaattctaataggc 574  Q
    ||||||||| | || |||||| ||||| |||||||||||||||||||||||    
T  27112020 agaaaaacacccacctaacacaaaaagcaagaggactcaattctaataggc 27111970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 526 - 576
Target Start/End: Original strand, 36118576 - 36118626
Alignment:
Q  526 aaaaacatctacttaacaccaaaaggaagaggactcaattctaataggcct 576  Q
    ||||||||| || |||||||||||| |||| ||| ||||||||||||||||    
T  36118576 aaaaacatccacctaacaccaaaagcaagatgacccaattctaataggcct 36118626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 406 - 463
Target Start/End: Original strand, 11906904 - 11906961
Alignment:
Q  406 tatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaat 463  Q
    |||||||||||||  ||| ||||||||||||| ||||||||||| | |||| ||||||    
T  11906904 tatttaaatttttataaagataaatacaaggtaccgtatatatgtggtacatccaaat 11906961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 453 - 494
Target Start/End: Complemental strand, 24969484 - 24969443
Alignment:
Q  453 tacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||| |||||||| |||| |||||||||||||||||    
T  24969484 tacacccaaaggtgaaaatgactaccgtatacatgaggaacc 24969443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 683
Target Start/End: Complemental strand, 36178547 - 36178502
Alignment:
Q  638 atggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaat 683  Q
    ||||||||||||||||| |||||||||||| || || |||||||||    
T  36178547 atggagtgattgtgatggaacgcgtggtattagggagaaagagaat 36178502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 6e-36; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 2412186 - 2412081
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||| || |||||||||||||||||||  ||||||||||||||||||    
T  2412186 acaatgttctatttaaattttttaaaaaataaatacaaagtgtcgtatatatgcgatgcatccaaatgtgaaaatcactactgtatacatgaggaacctc 2412087  T
Q  497 aaacca 502  Q
    ||||||    
T  2412086 aaacca 2412081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 14318387 - 14318492
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||| |||||  |||||||||||| |||||||||||||||||||    
T  14318387 acaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacatccaaaaatgaaaatcactaccgtatacatgaggaacctc 14318486  T
Q  497 aaacca 502  Q
    ||||||    
T  14318487 aaacca 14318492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 36868878 - 36868983
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    |||||||||||||||| |||||||||| |||||||||||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||| |||    
T  36868878 acaatgttctatttaatttttttaaaagataaatacaaggtgtcgtatatatgtggtacacccaaatgtgaaaatcactaccgtatacatgaggaatctc 36868977  T
Q  497 aaacca 502  Q
    ||||||    
T  36868978 aaacca 36868983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 397 - 508
Target Start/End: Original strand, 2024644 - 2024755
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||||||||||||||||||||| ||| |||||||||| |||||||||||||| ||||||||||||  |||||||||||| | |||||||||||| ||||    
T  2024644 acaatgttctatttaaatttttttaaagataaatacaatgtgccgtatatatgtgatacacccaaagatgaaaatcactaccatatacatgaggatcctc 2024743  T
Q  497 aaaccatactcc 508  Q
    ||||||| ||||    
T  2024744 aaaccatcctcc 2024755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 1366528 - 1366633
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    |||||||||||||||||||||||| || ||||||||||| ||  |||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||    
T  1366528 acaatgttctatttaaattttttataagataaatacaagatgtggtatatatgcgatacacctaaatgtgaaaatcactaccgtatatatgaggaacctc 1366627  T
Q  497 aaacca 502  Q
    | ||||    
T  1366628 atacca 1366633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 34426001 - 34425896
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||| |||  | ||||||| || |||||||||||||||||||    
T  34426001 acaatgttctatttcaattttttaaaagataaatacaaggtgccgtatatatgtgatacacctaaagattaaaatcattaccgtatacatgaggaacctc 34425902  T
Q  497 aaacca 502  Q
    ||||||    
T  34425901 aaacca 34425896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 398 - 494
Target Start/End: Complemental strand, 9364388 - 9364292
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  9364388 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 9364292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 16198797 - 16198893
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||| |||||||| |||| |||||||||||||||||    
T  16198797 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaacc 16198893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 398 - 494
Target Start/End: Complemental strand, 30854426 - 30854330
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||| || | |||||||| ||||||||||||||||||||||    
T  30854426 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactatcgtatacatgaggaacc 30854330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 34756369 - 34756465
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||| |||| |||||||||||||||||    
T  34756369 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 34756465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 392 - 502
Target Start/End: Original strand, 2530894 - 2531004
Alignment:
Q  392 aaaagacaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagga 491  Q
    |||||| |||||||||||||| |||||||||| |||||||||| ||| ||||||||| || |||| ||||| |||||||||||||  |||||||||||||    
T  2530894 aaaagaaaatgttctatttaagttttttaaaagataaatacaatgtgtcgtatatatacggtacatccaaaggtgaaaatcactactgtatacatgagga 2530993  T
Q  492 acctcaaacca 502  Q
    |||||||||||    
T  2530994 acctcaaacca 2531004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 398 - 494
Target Start/End: Complemental strand, 27079108 - 27079012
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||| ||| |||||||| ||||  ||||||||||||||||    
T  27079108 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaatgactactgtatacatgaggaacc 27079012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 28822345 - 28822441
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||||| |||| ||||||||||| |||||    
T  28822345 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgatgaacc 28822441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 400 - 496
Target Start/End: Original strand, 36187884 - 36187980
Alignment:
Q  400 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||| |||| |||||||||||| ||||||    
T  36187884 atgttctatttatattttttaaaatataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagaaacctc 36187980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 399 - 494
Target Start/End: Original strand, 16799331 - 16799426
Alignment:
Q  399 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    ||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||||| | || |||||||||||||||||    
T  16799331 aatgttctatttatattttttaaaaaataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaacc 16799426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 401 - 494
Target Start/End: Complemental strand, 19523293 - 19523200
Alignment:
Q  401 tgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||| |||| | |||||||||||||||    
T  19523293 tgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgaggaacc 19523200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 399 - 491
Target Start/End: Original strand, 26718953 - 26719045
Alignment:
Q  399 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagga 491  Q
    ||||||||||||||| ||||||||| |||||||||| ||| |||||||||||||||||| |||| ||||||||||||| || |||||||||||    
T  26718953 aatgttctatttaaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgagga 26719045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 399 - 491
Target Start/End: Original strand, 26988697 - 26988789
Alignment:
Q  399 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagga 491  Q
    ||||||||||||||| ||||||||| |||||||||| ||| |||||||||||||||||| |||| ||||||||||||| || |||||||||||    
T  26988697 aatgttctatttaaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgagga 26988789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 38869366 - 38869462
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||| |||||| |||||||||||| |||||||||| |||||||| |||| |||||||||||| ||||    
T  38869366 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 38869462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 41911619 - 41911721
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||||||| | |||| |||||||||| | |||||||||||| |||||||| ||| |||||||||| || ||||||||||||||||| ||||||||||||    
T  41911619 acaatgttcaacttaatttttttaaaagagaaatacaaggtgtcgtatataagcggtacacccaaaagtaaaaatcactatcgtatatatgaggaacctc 41911718  T
Q  497 aaa 499  Q
    |||    
T  41911719 aaa 41911721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 11242320 - 11242425
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    |||||||||||||||| |||||||||| ||||||||||  ||  ||||||||| |||||| |||||  || ||||||||| |||||||||||||||||||    
T  11242320 acaatgttctatttaatttttttaaaagataaatacaaaatgatgtatatatgtgatacaaccaaagatggaaatcactaccgtatacatgaggaacctc 11242419  T
Q  497 aaacca 502  Q
    ||||||    
T  11242420 aaacca 11242425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 33037878 - 33037773
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    |||||||| |||||||||||||||||| ||||||||||| |  ||||||||||   |||||||||| ||||||| || || |||||||||||||||||||    
T  33037878 acaatgttttatttaaattttttaaaagataaatacaagatatcgtatatatgttgtacacccaaaggtgaaaaccattaccgtatacatgaggaacctc 33037779  T
Q  497 aaacca 502  Q
    ||||||    
T  33037778 aaacca 33037773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 40794329 - 40794434
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    |||||||| |||||||||||||||||| | |||||||| | |||||| ||||  |||||||| ||| ||||||||||||| |||||||||||| ||||||    
T  40794329 acaatgttttatttaaattttttaaaagacaaatacaaagagccgtaaatatatgatacaccaaaaggtgaaaatcactaccgtatacatgagaaacctc 40794428  T
Q  497 aaacca 502  Q
    ||||||    
T  40794429 aaacca 40794434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 23284065 - 23284161
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||   ||||||||||||| |||||||||||| ||||||||||  ||||||| |||| |||||||||||||||||    
T  23284065 caatgttctatttatattttttaaagactaaatacaaggtgtcgtatatatgcggtacacccaaagatgaaaatgactaccgtatacatgaggaacc 23284161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 398 - 490
Target Start/End: Original strand, 31194615 - 31194706
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagg 490  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| || ||||| | |||||||| |||| |||||||||||||    
T  31194615 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtaaacccagaggtgaaaat-actaccgtatacatgagg 31194706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 399 - 502
Target Start/End: Complemental strand, 10543769 - 10543667
Alignment:
Q  399 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 498  Q
    ||||||| | ||||||||||||||| ||||||| ||||||  |||||||||||||||| ||||| ||||||||||||| ||||||||| ||||| |||||    
T  10543769 aatgttccacttaaattttttaaaagataaatataaggtgatgtatatatgcgatacatccaaaggtgaaaatcactaccgtatacat-aggaatctcaa 10543671  T
Q  499 acca 502  Q
    ||||    
T  10543670 acca 10543667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 399 - 502
Target Start/End: Complemental strand, 24395835 - 24395732
Alignment:
Q  399 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 498  Q
    ||||||||||||||||||||||||| ||||||||||||||  |||||||| | ||||| ||||| ||||||||||| | |||||| ||||||||| | ||    
T  24395835 aatgttctatttaaattttttaaaagataaatacaaggtgttgtatatatacaatacatccaaaggtgaaaatcaccaccgtatagatgaggaactttaa 24395736  T
Q  499 acca 502  Q
    ||||    
T  24395735 acca 24395732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 400 - 494
Target Start/End: Original strand, 15480094 - 15480188
Alignment:
Q  400 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||| ||||||||||| ||||||||||| || |||||||||||| |||||||| | |||||||| |||| ||||| |||||||||||    
T  15480094 atgttctatttatattttttaaaagataaatacaagatgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatgcatgaggaacc 15480188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 414 - 502
Target Start/End: Complemental strand, 15639724 - 15639636
Alignment:
Q  414 ttttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaacca 502  Q
    |||||| ||| |||||||||||||| ||||||||||||||||| |||||  ||||||||||| |||||||||| |||||||| ||||||    
T  15639724 tttttttaaagataaatacaaggtgacgtatatatgcgatacatccaaagatgaaaatcactgtcgtatacataaggaaccttaaacca 15639636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 16592077 - 16592173
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||| ||||| ||||||||| |||| |||||||||||| |||||||| | |||||||| |||| |||||| ||||||||||    
T  16592077 caatgttctatttatattttctaaaagataaatacagggtgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatatatgaggaacc 16592173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 405 - 493
Target Start/End: Complemental strand, 27924172 - 27924084
Alignment:
Q  405 ctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaac 493  Q
    ||||||| ||||||||||| ||||||| ||||||||||||||||||| |||| ||||| || ||||| |||| ||||||||||||||||    
T  27924172 ctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtaaaaatgactaccgtatacatgaggaac 27924084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 40389539 - 40389635
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||| |||||| |||||||||||| |||| ||||| |||||||| |||| |||||  ||||||||||    
T  40389539 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatttatgaggaacc 40389635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 400 - 494
Target Start/End: Complemental strand, 2274985 - 2274891
Alignment:
Q  400 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||| ||||||||||| |||||||||||||  |||||||||||  |||||||| | |||||||| |||| |||||||| ||||||||    
T  2274985 atgttctatttatattttttaaaagataaatacaaggtatcgtatatatgcagtacacccagaggtgaaaatgactaccgtatacacgaggaacc 2274891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 398 - 471
Target Start/End: Complemental strand, 7338096 - 7338023
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaat 471  Q
    |||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||| ||| ||||||||    
T  7338096 caatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacctaaaggtgaaaat 7338023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 398 - 490
Target Start/End: Complemental strand, 7671022 - 7670929
Alignment:
Q  398 caatgttctatttaaatttttt-aaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagg 490  Q
    |||||||||||||| ||||||| |||| ||||||| |||||||||||||| | || |||||||||| |||||||| |||| |||||||||||||    
T  7671022 caatgttctatttatatttttttaaaagataaatataaggtgccgtatatttacggtacacccaaaggtgaaaatgactaccgtatacatgagg 7670929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 22648738 - 22648843
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||||||||||||||||||||||||| |||||||||| ||| |||||||||| |  ||| ||||| |||| ||||||||  ||||| || || ||||||    
T  22648738 acaatgttctatttaaattttttaaaagataaatacaatgtgtcgtatatatgtggcacatccaaaggtgacaatcactactgtataaataagaaacctc 22648837  T
Q  497 aaacca 502  Q
    ||||||    
T  22648838 aaacca 22648843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 22986561 - 22986657
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||| | ||||||||||| | |||||||| ||| |||||||||||| |||||||| | |||||||| |||| |||||||||||| ||||    
T  22986561 caatgttctattaatattttttaaaagacaaatacaaagtgtcgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgagaaacc 22986657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 10407559 - 10407454
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||||||||||||||||||||||||| ||||| |||||||| |||| |||||   |||| | ||| |||||||| |||| ||||| ||||||||| |||    
T  10407559 acaatgttctatttaaattttttaaaagataaacacaaggtgtcgtacatatgttgtacatctaaaagtgaaaattactaccgtatgcatgaggaatctc 10407460  T
Q  497 aaacca 502  Q
     |||||    
T  10407459 caacca 10407454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 398 - 490
Target Start/End: Original strand, 31881437 - 31881528
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagg 490  Q
    |||||||||||||| ||||||||||| ||||||||| |||||||||||||||||  ||| ||| |  ||||||| |||| |||||||||||||    
T  31881437 caatgttctatttatattttttaaaagataaatacacggtgccgtatatatgcggaacatccagagatgaaaat-actaccgtatacatgagg 31881528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 397 - 438
Target Start/End: Complemental strand, 606252 - 606211
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtg 438  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  606252 acaatgttctatttaaattttttaaaagataaatacaaggtg 606211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 17345054 - 17344949
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    |||||||||||||||||||||||| |  ||||||||||| || | | |||||||| ||||||||||  | ||||| |||| ||||| ||  | |||||||    
T  17345054 acaatgttctatttaaattttttatataataaatacaagatgtcatgtatatgcggtacacccaaagataaaaattactaccgtatccacaaagaacctc 17344955  T
Q  497 aaacca 502  Q
    ||||||    
T  17344954 aaacca 17344949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 637 - 686
Target Start/End: Original strand, 2024868 - 2024917
Alignment:
Q  637 gatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataag 686  Q
    ||||||||||| |||||| |||||| ||||||||||| ||||||||||||    
T  2024868 gatggagtgatggtgatggaacgcgcggtatcagagagaaagagaataag 2024917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 539 - 576
Target Start/End: Complemental strand, 34425873 - 34425836
Alignment:
Q  539 taacaccaaaaggaagaggactcaattctaataggcct 576  Q
    |||||||||||| |||||||||||||||||||||||||    
T  34425873 taacaccaaaagcaagaggactcaattctaataggcct 34425836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 634 - 685
Target Start/End: Complemental strand, 2411964 - 2411913
Alignment:
Q  634 tctgatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataa 685  Q
    |||||||||||||| |||||| ||| |||||||||| ||| |||||||||||    
T  2411964 tctgatggagtgatggtgatggaacacgtggtatcaaagagaaagagaataa 2411913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 637 - 684
Target Start/End: Original strand, 26719124 - 26719171
Alignment:
Q  637 gatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaata 684  Q
    |||| |||||| |||||| |||||||||||||||||| ||||||||||    
T  26719124 gatgcagtgatggtgatggaacgcgtggtatcagagagaaagagaata 26719171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 637 - 684
Target Start/End: Original strand, 26988868 - 26988915
Alignment:
Q  637 gatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaata 684  Q
    |||| |||||| |||||| |||||||||||||||||| ||||||||||    
T  26988868 gatgcagtgatggtgatggaacgcgtggtatcagagagaaagagaata 26988915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 637 - 688
Target Start/End: Original strand, 34307362 - 34307413
Alignment:
Q  637 gatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataagaa 688  Q
    ||||||||||| |||||| |||  ||||||||||||| ||||||||||||||    
T  34307362 gatggagtgatggtgatggaacatgtggtatcagagagaaagagaataagaa 34307413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 634 - 688
Target Start/End: Complemental strand, 606210 - 606156
Alignment:
Q  634 tctgatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataagaa 688  Q
    |||||||||||||| |||||| || | ||||||||||||  ||||||||||||||    
T  606210 tctgatggagtgatggtgatggaatgtgtggtatcagagtgaaagagaataagaa 606156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 435
Target Start/End: Complemental strand, 27530581 - 27530543
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaag 435  Q
    ||||||||||||||||||||||||||| || ||||||||    
T  27530581 acaatgttctatttaaattttttaaaagattaatacaag 27530543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 526 - 576
Target Start/End: Original strand, 40794442 - 40794492
Alignment:
Q  526 aaaaacatctacttaacaccaaaaggaagaggactcaattctaataggcct 576  Q
    ||||||||| || |||||||||||| |||||||| ||||||||||| ||||    
T  40794442 aaaaacatcaacctaacaccaaaagtaagaggacccaattctaataagcct 40794492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 539 - 576
Target Start/End: Original strand, 2024770 - 2024807
Alignment:
Q  539 taacaccaaaaggaagaggactcaattctaataggcct 576  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  2024770 taacaccaaaagcaagaggactcaattctaatatgcct 2024807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 641 - 686
Target Start/End: Complemental strand, 15639322 - 15639277
Alignment:
Q  641 gagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataag 686  Q
    ||||||| |||||| |||| ||||||||||||| ||||||||||||    
T  15639322 gagtgatggtgatggaacgtgtggtatcagagagaaagagaataag 15639277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 539 - 576
Target Start/End: Complemental strand, 15639616 - 15639579
Alignment:
Q  539 taacaccaaaaggaagaggactcaattctaataggcct 576  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  15639616 taacaccaaaagtaagaggacccaattctaataggcct 15639579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 397 - 434
Target Start/End: Complemental strand, 22875040 - 22875003
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaa 434  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  22875040 acaatattctatttaaattttttaaaagataaatacaa 22875003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 6e-36; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 38400895 - 38400790
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||  |||| ||||||||||||| |||||||||||||||||||    
T  38400895 acaatgttctatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacattcaaaggtgaaaatcactaccgtatacatgaggaacctc 38400796  T
Q  497 aaacca 502  Q
    ||||||    
T  38400795 aaacca 38400790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 397 - 511
Target Start/End: Original strand, 21665705 - 21665819
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||||||||||||||||||||||||| ||||||||| |||| |||||||||| |||||| | ||||||||||||||||| ||||||||||||||||| |    
T  21665705 acaatgttctatttaaattttttaaaagataaatacacggtgtcgtatatatgtgatacatcaaaatgtgaaaatcactaccgtatacatgaggaaccac 21665804  T
Q  497 aaaccatactcctaa 511  Q
    ||||||  |||||||    
T  21665805 aaaccaccctcctaa 21665819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 12134045 - 12134150
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    |||||||||||||||||   ||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||    
T  12134045 acaatgttctatttaaaaaatttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaagtgaaaatcactaccgtatacattaggaacctc 12134144  T
Q  497 aaacca 502  Q
    ||||||    
T  12134145 aaacca 12134150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 16097105 - 16097000
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||   |||||||||| |||||||| |||| | |||||||||||||||||    
T  16097105 acaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgatgtacacccaaaggtgaaaattactaccttatacatgaggaacctc 16097006  T
Q  497 aaacca 502  Q
    ||||||    
T  16097005 aaacca 16097000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 24035550 - 24035655
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||| ||||||||||||| || |||||||||||| | |    
T  24035550 acaatgttctatttaaattttttaaaagataaatacaaggtgccgtataaatgcgatacacctaaaggtgaaaatcactaccgcatacatgaggaatcgc 24035649  T
Q  497 aaacca 502  Q
    ||||||    
T  24035650 aaacca 24035655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 392 - 494
Target Start/End: Complemental strand, 24410539 - 24410437
Alignment:
Q  392 aaaagacaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagga 491  Q
    |||| ||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||||| |||| ||||||||||||||    
T  24410539 aaaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 24410440  T
Q  492 acc 494  Q
    |||    
T  24410439 acc 24410437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 13800549 - 13800652
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacaccc-aaatgtgaaaatcactatcgtatacatgaggaacct 495  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||   |||||| |||||||||    
T  13800549 acaatgttctatttaaattttttaaaagataaatataaggtgccgtatatatgcgatacacccaaaaggtgaaaatcactactatatacacgaggaacct 13800648  T
Q  496 caaa 499  Q
    ||||    
T  13800649 caaa 13800652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 397 - 498
Target Start/End: Original strand, 28425715 - 28425816
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    |||||||||||||||||  |||||||| |||||||||||||| |||||||||||  |||||||||||||||||||||||| | |||| ||||||||||||    
T  28425715 acaatgttctatttaaaaattttaaaagataaatacaaggtgtcgtatatatgcagtacacccaaatgtgaaaatcactaccatatatatgaggaacctc 28425814  T
Q  497 aa 498  Q
    ||    
T  28425815 aa 28425816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 398 - 494
Target Start/End: Complemental strand, 3155313 - 3155217
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||| | | |||||||| |||| |||||||||||||||||    
T  3155313 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaacc 3155217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 398 - 494
Target Start/End: Complemental strand, 4505990 - 4505894
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | || ||||| |||| |||||||||||||||||    
T  4505990 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacc 4505894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 398 - 494
Target Start/End: Complemental strand, 6965103 - 6965007
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| |||||||||| |||||||||||||||| |||||||| | |||||||| |||| |||||||||||||||||    
T  6965103 caatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 6965007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 29939868 - 29939964
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| |||||||| || |||||||||||||| |||||||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  29939868 caatgttctatttatattttttacaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 29939964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 397 - 494
Target Start/End: Complemental strand, 9046127 - 9046029
Alignment:
Q  397 acaatgttctatttaaatttttt-aaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    ||||||||||||||| ||||||| |||| ||||||| ||||||||||||||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  9046127 acaatgttctatttatatttttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 9046029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 11912762 - 11912867
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||||||||||||||||||   |||| |||||||||| ||||||||||||||| ||||| |||||  |||||||||||| ||||||||| |||||||||    
T  11912762 acaatgttctatttaaatttaaaaaaaaataaatacaaagtgccgtatatatgcaatacatccaaagatgaaaatcactaccgtatacataaggaacctc 11912861  T
Q  497 aaacca 502  Q
    ||||||    
T  11912862 aaacca 11912867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 10762571 - 10762667
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| ||||||||| | |||||||||| |||||||| |||| |||||||||||||||||    
T  10762571 caatgttctatttatattttttaaaagataaatataaggtgcggtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 10762667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 425 - 499
Target Start/End: Complemental strand, 37182739 - 37182665
Alignment:
Q  425 ataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaa 499  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  37182739 ataaatacaaggtgtcgtatatatgcaatacacccaaaagtgaaaatcactaccgtatacatgaggaacctcaaa 37182665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 16227373 - 16227478
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||| ||||||||||||||||||||| |||||||||||||| |||||||||| |||||||| | |  ||||||||||||   ||||||| |||||||||    
T  16227373 acaattttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacaccgatagatgaaaatcactactatatacataaggaacctc 16227472  T
Q  497 aaacca 502  Q
    ||||||    
T  16227473 aaacca 16227478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 398 - 494
Target Start/End: Complemental strand, 26716225 - 26716128
Alignment:
Q  398 caatgttctatttaaatttttt-aaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||| |||| ||||||| |||||||| |||||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  26716225 caatgttctatttatatttttttaaaagataaatataaggtgccatatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 26716128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 12337454 - 12337550
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| |||||||||||||| | |||||||| | |||||||| | |||||||| |||| |||||||||||||||||    
T  12337454 caatgttctatttatattttttaaaagataaatacaaggtgtcatatatatgtggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 12337550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 399 - 494
Target Start/End: Original strand, 8907086 - 8907181
Alignment:
Q  399 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    ||||||||||||| ||||||||||| |||||||||||| |||||||||||||| |||||||| | || ||||| |||| |||||||||||| ||||    
T  8907086 aatgttctatttatattttttaaaagataaatacaaggcgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagaaacc 8907181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 400 - 494
Target Start/End: Complemental strand, 3953100 - 3953006
Alignment:
Q  400 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||| ||||| |||||||| | |||||||| | || ||||| |||||||||||    
T  3953100 atgttctatttatattttttaaaagataaatacaaggtgccgtatacatgcggtacacccagaggtgaaaatgattaccgtatgcatgaggaacc 3953006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 400 - 494
Target Start/End: Complemental strand, 7162878 - 7162784
Alignment:
Q  400 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||| || || || | |||||||| |||| |||||| ||||||||||    
T  7162878 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatatatgaggaacc 7162784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 7742138 - 7742244
Alignment:
Q  397 acaatgttctatttaaatttttt-aaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacct 495  Q
    ||||||||||||||| ||||||| |||| |||||||||| ||| | |||||||||| |||| ||||| |||||||  |||||||||| ||||||||||||    
T  7742138 acaatgttctatttatatttttttaaaagataaatacaatgtgtcatatatatgcgttacatccaaaggtgaaaaatactatcgtatgcatgaggaacct 7742237  T
Q  496 caaacca 502  Q
    |||||||    
T  7742238 caaacca 7742244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 398 - 493
Target Start/End: Original strand, 27506746 - 27506841
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaac 493  Q
    ||||| |||||||| ||||||||||| ||||||| ||||||||||||||||| | |||||||||| || ||||| ||||  |||||||||||||||    
T  27506746 caatgatctatttatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtaaaaatgactactgtatacatgaggaac 27506841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 398 - 460
Target Start/End: Complemental strand, 34694071 - 34694009
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacaccca 460  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||| | ||||||||    
T  34694071 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacaccca 34694009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 398 - 460
Target Start/End: Complemental strand, 34716483 - 34716421
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacaccca 460  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||| | ||||||||    
T  34716483 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacaccca 34716421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 398 - 460
Target Start/End: Complemental strand, 40636234 - 40636172
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacaccca 460  Q
    |||||||||||||| ||||||||||| |||||||||||||| |||||||||||| ||||||||    
T  40636234 caatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacaccca 40636172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 637 - 688
Target Start/End: Original strand, 16227599 - 16227650
Alignment:
Q  637 gatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataagaa 688  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  16227599 gatggagtgatggtgatgaaacgcgtggtatcagagagaaagagaataagaa 16227650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 399 - 502
Target Start/End: Complemental strand, 10252511 - 10252400
Alignment:
Q  399 aatgttctatttaaattttttaaaacataaatacaaggt---gccgtatatatgcgatacacccaaatgtgaaaatcac-----tatcgtatacatgagg 490  Q
    ||||||| ||||||||||||||||| |||||||||||||   | ||||||||| | | ||||||||| ||||||| |||     |||| |||||||||||    
T  10252511 aatgttcaatttaaattttttaaaagataaatacaaggtgtcgtcgtatatatactacacacccaaaggtgaaaaccactatcatatcatatacatgagg 10252412  T
Q  491 aacctcaaacca 502  Q
    ||||||||||||    
T  10252411 aacctcaaacca 10252400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 413 - 460
Target Start/End: Original strand, 5952736 - 5952783
Alignment:
Q  413 attttttaaaacataaatacaaggtgccgtatatatgcgatacaccca 460  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  5952736 attttttaaaagataaatacaaggtgccgtatatatgcggtacaccca 5952783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 420 - 502
Target Start/End: Original strand, 22727530 - 22727612
Alignment:
Q  420 aaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaacca 502  Q
    |||| |||||||| | ||| |||||||||||| |||||||||| ||||||||||||| | |||||||||  | ||||||||||    
T  22727530 aaaagataaatactatgtgacgtatatatgcggtacacccaaaagtgaaaatcactaccatatacatgataaccctcaaacca 22727612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 473
Target Start/End: Complemental strand, 42029242 - 42029166
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatca 473  Q
    ||||||||||||||||||||||||||| ||||||| |||||| | |||| |||   |||||| ||| ||||||||||    
T  42029242 acaatgttctatttaaattttttaaaagataaatataaggtgtcatatacatgttgtacacctaaaggtgaaaatca 42029166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 441 - 502
Target Start/End: Complemental strand, 29694432 - 29694376
Alignment:
Q  441 gtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaacca 502  Q
    ||||||| ||||||||||||||||||||||||||     |||||||||| ||||||||||||    
T  29694432 gtatatacgcgatacacccaaatgtgaaaatcac-----tatacatgagaaacctcaaacca 29694376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 430 - 502
Target Start/End: Original strand, 11952644 - 11952716
Alignment:
Q  430 tacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaacca 502  Q
    ||||| ||| |||||||||| ||||||| || |  ||||||||||||  | ||||||||||||||||||||||    
T  11952644 tacaaagtgtcgtatatatgtgatacactcatagatgaaaatcactactgcatacatgaggaacctcaaacca 11952716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 634 - 686
Target Start/End: Original strand, 21665928 - 21665980
Alignment:
Q  634 tctgatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataag 686  Q
    ||||||||||||||  ||||| |||||||||||||| ||| ||||||||||||    
T  21665928 tctgatggagtgatgatgatggaacgcgtggtatcaaagagaaagagaataag 21665980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 636 - 688
Target Start/End: Complemental strand, 37182540 - 37182488
Alignment:
Q  636 tgatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataagaa 688  Q
    ||||||||| || |||||| |||| ||||||||||||| ||||||||||||||    
T  37182540 tgatggagtaatggtgatgtaacgtgtggtatcagagagaaagagaataagaa 37182488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 448
Target Start/End: Original strand, 11952593 - 11952643
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatat 448  Q
    ||||||||||||||||||||||||||| || ||||||| ||| |||||||||    
T  11952593 acaatgttctatttaaattttttaaaagat-aatacaaagtgtcgtatatat 11952643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 432
Target Start/End: Original strand, 22727462 - 22727497
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatac 432  Q
    ||||||||||||||||||||||||||| ||||||||    
T  22727462 acaatgttctatttaaattttttaaaagataaatac 22727497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 639 - 685
Target Start/End: Original strand, 11952839 - 11952885
Alignment:
Q  639 tggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataa 685  Q
    ||||||||| |||||| ||||||||||| |||||| |||||||||||    
T  11952839 tggagtgatggtgatggaacgcgtggtaccagagagaaagagaataa 11952885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 526 - 576
Target Start/End: Original strand, 12134160 - 12134210
Alignment:
Q  526 aaaaacatctacttaacaccaaaaggaagaggactcaattctaataggcct 576  Q
    ||||||||  || |||||||||||| ||||| |||||||||||||||||||    
T  12134160 aaaaacatacacctaacaccaaaagcaagagaactcaattctaataggcct 12134210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 526 - 576
Target Start/End: Original strand, 37622461 - 37622511
Alignment:
Q  526 aaaaacatctacttaacaccaaaaggaagaggactcaattctaataggcct 576  Q
    ||||||| | ||||||||||||||| |||||||| ||||||||||| ||||    
T  37622461 aaaaacacccacttaacaccaaaagtaagaggacccaattctaatatgcct 37622511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 634 - 688
Target Start/End: Original strand, 37622549 - 37622603
Alignment:
Q  634 tctgatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataagaa 688  Q
    ||||||||||||||  ||||| |||||||||||| ||||| ||||| ||||||||    
T  37622549 tctgatggagtgatgatgatggaacgcgtggtatgagagagaaagataataagaa 37622603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 399 - 500
Target Start/End: Original strand, 206496 - 206597
Alignment:
Q  399 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 498  Q
    ||||||||||||||||||| ||||| |||||||||||||| |||||||||||| |||||||||  ||||||||||||| |||||||||||||||||||||    
T  206496 aatgttctatttaaattttgtaaaagataaatacaaggtgtcgtatatatgcggtacacccaatggtgaaaatcactaccgtatacatgaggaacctcaa 206595  T
Q  499 ac 500  Q
    ||    
T  206596 ac 206597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 1e-33; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 7398549 - 7398444
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||||||||||||||||||||| ||| |||||||||||||||| |||||||| |||||||| ||| ||||||||||||| | |||||||||||||||||    
T  7398549 acaatgttctatttaaattttttgaaagataaatacaaggtgccatatatatgtgatacacctaaaggtgaaaatcactaccatatacatgaggaacctc 7398450  T
Q  497 aaacca 502  Q
    ||||||    
T  7398449 aaacca 7398444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 399 - 502
Target Start/End: Complemental strand, 23859169 - 23859066
Alignment:
Q  399 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 498  Q
    ||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||  ||||||| |||| |||||||||||||| ||||||    
T  23859169 aatgttctatttaaattttttaaaagataaatacaatgtaccgtatatatgcgatacacccaaagatgaaaattactaccgtatacatgaggatcctcaa 23859070  T
Q  499 acca 502  Q
    ||||    
T  23859069 acca 23859066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 405 - 502
Target Start/End: Original strand, 9021812 - 9021908
Alignment:
Q  405 ctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaacca 502  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||| ||||||||||||| ||||||||||||| |||||||||||    
T  9021812 ctatttaaattttttaaaagataaatacaatgtgccgtatatatgcggtacacccaaaggtgaaaatcactaccgtatacatgagg-acctcaaacca 9021908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 27237427 - 27237532
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||||||||||||||||||||||||| ||||||||||||||  ||||||||| |||  | | ||| |||||||||||||||||||||||||||||||||    
T  27237427 acaatgttctatttaaattttttaaaagataaatacaaggtgttgtatatatgtgatgaatctaaaggtgaaaatcactatcgtatacatgaggaacctc 27237526  T
Q  497 aaacca 502  Q
    ||||||    
T  27237527 aaacca 27237532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 18776771 - 18776867
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||| |||| |||||||||||| ||||    
T  18776771 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaaaatgactaccgtatacatgagaaacc 18776867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 397 - 500
Target Start/End: Original strand, 2611266 - 2611369
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||| |||  ||||||||||| |  ||||||||||||||||||    
T  2611266 acaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacacaatggtgaaaatcacaactgtatacatgaggaacctc 2611365  T
Q  497 aaac 500  Q
    ||||    
T  2611366 aaac 2611369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 392 - 494
Target Start/End: Original strand, 20091280 - 20091382
Alignment:
Q  392 aaaagacaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagga 491  Q
    |||| |||||| |||||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||||| |||| ||||||||||||||    
T  20091280 aaaaaacaatgatctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 20091379  T
Q  492 acc 494  Q
    |||    
T  20091380 acc 20091382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 397 - 494
Target Start/End: Original strand, 24525689 - 24525786
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    ||||||||||||||| ||||||||||| ||||||| |||||||||| |||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  24525689 acaatgttctatttatattttttaaaagataaatataaggtgccgtgtatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacc 24525786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 8171544 - 8171640
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |  ||||||| |||| |||||||||||||||||    
T  8171544 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacc 8171640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 392 - 494
Target Start/End: Original strand, 48983843 - 48983945
Alignment:
Q  392 aaaagacaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagga 491  Q
    |||| |||||| |||||||| ||||||||||| ||||||| |||||| |||||||||||| |||||||||| |||||||| |||| ||||||||||||||    
T  48983843 aaaaaacaatgatctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaataactaccgtatacatgagga 48983942  T
Q  492 acc 494  Q
    |||    
T  48983943 acc 48983945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 6765685 - 6765790
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||| ||  |||| ||||| ||||||||||||| |||||| | ||| ||||||    
T  6765685 acaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatataagccgtacatccaaaggtgaaaatcactaccgtatataagagtaacctc 6765784  T
Q  497 aaacca 502  Q
    ||||||    
T  6765785 aaacca 6765790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 12419499 - 12419604
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||||||||||||||||||||||||| |||||||||| || || ||||| || |||||| |||||  ||||||||||||| | ||||||||||||||||    
T  12419499 acaatgttctatttaaattttttaaaagataaatacaatgtaccttatatgtgtgatacatccaaagatgaaaatcactattgaatacatgaggaacctc 12419598  T
Q  497 aaacca 502  Q
    ||||||    
T  12419599 aaacca 12419604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 398 - 494
Target Start/End: Complemental strand, 19692191 - 19692095
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||| |||||||| |||||||||| |||||| ||| |||||||| ||| ||||||||||||||||||    
T  19692191 caatgttctatttatattttttaaaagataaatataaggtgccatatatatgcggtacacctaaaggtgaaaatgactttcgtatacatgaggaacc 19692095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 398 - 494
Target Start/End: Complemental strand, 29077317 - 29077221
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||| | | |||||||| |||| |||||||||||||||||    
T  29077317 caatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacaccaagaggtgaaaatgactaccgtatacatgaggaacc 29077221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 399 - 502
Target Start/End: Complemental strand, 12981422 - 12981319
Alignment:
Q  399 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 498  Q
    |||||||||||||| |||||||||| ||||||||||||| || |||||| ||| ||||| |||| |||||||||||||  ||||| ||||||||||||||    
T  12981422 aatgttctatttaatttttttaaaagataaatacaaggttccatatatacgcggtacacacaaaggtgaaaatcactactgtatatatgaggaacctcaa 12981323  T
Q  499 acca 502  Q
    ||||    
T  12981322 acca 12981319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 400 - 494
Target Start/End: Complemental strand, 10955579 - 10955485
Alignment:
Q  400 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||||||||||| ||||| || | |||||||| |||| |||||||||||||||||    
T  10955579 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatgaggaacc 10955485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 399 - 508
Target Start/End: Complemental strand, 36891674 - 36891565
Alignment:
Q  399 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 498  Q
    ||||||||||||| ||||||||||  || ||||||| |||  |||||||| || |||| ||||| ||||||||||||| |||||||||||||||||||||    
T  36891674 aatgttctatttatattttttaaatgatgaatacaatgtgttgtatatattcggtacatccaaaggtgaaaatcactaccgtatacatgaggaacctcaa 36891575  T
Q  499 accatactcc 508  Q
    ||||| ||||    
T  36891574 accatcctcc 36891565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 399 - 494
Target Start/End: Complemental strand, 8239783 - 8239688
Alignment:
Q  399 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    ||||||||||||| ||||||||||| ||||||| || |||||||||||||| | ||||||||||||||||||| | || |||||| ||||||||||    
T  8239783 aatgttctatttatattttttaaaaaataaatataatgtgccgtatatatgtggtacacccaaatgtgaaaatgattaccgtatatatgaggaacc 8239688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 399 - 502
Target Start/End: Complemental strand, 20153297 - 20153194
Alignment:
Q  399 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 498  Q
    |||||| |||||||||||||||||| |||||||||| |||  |||||||||||||| |||||||  |||||||||||  ||||||||||||| | |||||    
T  20153297 aatgttttatttaaattttttaaaagataaatacaaagtgttgtatatatgcgataaacccaaagatgaaaatcactgccgtatacatgagggatctcaa 20153198  T
Q  499 acca 502  Q
    ||||    
T  20153197 acca 20153194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 400 - 494
Target Start/End: Original strand, 12596294 - 12596388
Alignment:
Q  400 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||| ||||||| ||| ||||||||||||||||||||||||| | |||||||| | |||||||| |||| ||||| |||||||||||    
T  12596294 atgttctatttatatttttttaaagataaatacaaggtgccgtatatatgtggtacacccagaggtgaaaatgactaccgtatgcatgaggaacc 12596388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 398 - 471
Target Start/End: Complemental strand, 26254090 - 26254017
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaat 471  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||  |||||||    
T  26254090 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaagatgaaaat 26254017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 47984974 - 47985071
Alignment:
Q  398 caatgttctatttaaatttttt-aaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||| |||| | ||||| ||||||||||||||||||| |||||||||| |||||||| || | |||||||||||||||||    
T  47984974 caatgttctatttatatttttttaaaagaaaaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgaccaccgtatacatgaggaacc 47985071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 10329415 - 10329511
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||||||||| |  | ||||||| |||||||| |||| |||||||||||| ||||    
T  10329415 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgaggaaaacccaaaggtgaaaatgactaccgtatacatgagaaacc 10329511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 398 - 490
Target Start/End: Complemental strand, 28749806 - 28749715
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagg 490  Q
    |||| ||||||||| |||||| |||| ||||||||||||||||||||||||||| ||||| || |||||||||| |||| |||||||||||||    
T  28749806 caatattctatttatatttttgaaaagataaatacaaggtgccgtatatatgcggtacactcagatgtgaaaat-actaccgtatacatgagg 28749715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 401 - 476
Target Start/End: Original strand, 21763595 - 21763670
Alignment:
Q  401 tgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcacta 476  Q
    ||||||||||||||||||||||| |||||||||| ||  ||||||||||||||||||| ||| |||||||||||||    
T  21763595 tgttctatttaaattttttaaaagataaatacaaagtatcgtatatatgcgatacaccaaaaagtgaaaatcacta 21763670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 397 - 511
Target Start/End: Complemental strand, 18201235 - 18201121
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    |||||| |||||||||||||||||||| ||||||||||| |||| |||||||| | |||||| ||  |||||||||  || | || ||||||||||||||    
T  18201235 acaatgatctatttaaattttttaaaatataaatacaagatgccatatatatgtggtacacctaagggtgaaaatcgttaccttacacatgaggaacctc 18201136  T
Q  497 aaaccatactcctaa 511  Q
    ||||||  |||||||    
T  18201135 aaaccaccctcctaa 18201121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 397 - 483
Target Start/End: Complemental strand, 23744894 - 23744808
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtata 483  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||| |||||| |||  | |||||||||| ||||||    
T  23744894 acaatgttctaattaaattttttaaaagataaatacaaggtgccgcatatatgcggtacacctaaagataaaaatcactaccgtata 23744808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 23551075 - 23551172
Alignment:
Q  398 caatgttctatttaaatttttt-aaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    ||||| |||||||| ||||||| |||| ||||||| |||||| |||||||||||| |||| ||||| |||||||| |||| |||||||||||||||||    
T  23551075 caatgatctatttatatttttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacc 23551172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 398 - 471
Target Start/End: Original strand, 33162344 - 33162417
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaat 471  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||||||||||||| |||||| ||| ||||||||    
T  33162344 caatgctctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaat 33162417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 402 - 494
Target Start/End: Original strand, 38414885 - 38414977
Alignment:
Q  402 gttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||  ||||||||||| ||||||| |||||| |||||||||| | |||||||||| |||||||| ||||  ||||||||||||||||    
T  38414885 gttctatttgtattttttaaaagataaatataaggtgacgtatatatgtggtacacccaaaggtgaaaatgactactgtatacatgaggaacc 38414977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 406 - 493
Target Start/End: Complemental strand, 38971341 - 38971255
Alignment:
Q  406 tatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaac 493  Q
    ||||||||||||| |||| |||||||||||||| ||||||||||  ||||||| ||||||||||||||||| |||| ||| |||||||    
T  38971341 tatttaaattttt-aaaagataaatacaaggtgtcgtatatatgttatacacctaaatgtgaaaatcactaccgtaaacacgaggaac 38971255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 397 - 491
Target Start/End: Original strand, 36902928 - 36903022
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagga 491  Q
    ||||||||||||||||||||||||| | ||||||||||| || ||||||||||   |||||| ||| |||||||||| ||  |||||||||||||    
T  36902928 acaatgttctatttaaattttttaatagataaatacaagatgtcgtatatatgttgtacacctaaaggtgaaaatcagtactgtatacatgagga 36903022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 407 - 499
Target Start/End: Original strand, 23020498 - 23020589
Alignment:
Q  407 atttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaa 499  Q
    ||||| ||||||||||| ||||||| ||||||  |||||||||| | |||| |||| ||||||||||||| |||||||||||||||| |||||    
T  23020498 atttagattttttaaaagataaatataaggtgttgtatatatgc-acacactcaaaggtgaaaatcactaccgtatacatgaggaacttcaaa 23020589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 406 - 499
Target Start/End: Original strand, 9014782 - 9014868
Alignment:
Q  406 tatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaa 499  Q
    |||||||||||| ||||| |||||||||| ||| |||||||||       ||||||| ||||||||||||| |||||||||||| |||||||||    
T  9014782 tatttaaattttgtaaaagataaatacaatgtgtcgtatatat-------acccaaaggtgaaaatcactaccgtatacatgagtaacctcaaa 9014868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 634 - 686
Target Start/End: Complemental strand, 23858949 - 23858897
Alignment:
Q  634 tctgatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataag 686  Q
    ||||||| |||||| |||||| |||||||||||||||||| ||||||||||||    
T  23858949 tctgatgcagtgatggtgatggaacgcgtggtatcagagagaaagagaataag 23858897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 637 - 688
Target Start/End: Original strand, 23020712 - 23020763
Alignment:
Q  637 gatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataagaa 688  Q
    |||||| |||| |||||| |||||||||||||||||| ||||||||||||||    
T  23020712 gatggaatgatggtgatggaacgcgtggtatcagagagaaagagaataagaa 23020763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 526 - 576
Target Start/End: Complemental strand, 7398434 - 7398384
Alignment:
Q  526 aaaaacatctacttaacaccaaaaggaagaggactcaattctaataggcct 576  Q
    ||||||||| || |||||||||||| |||||||| ||||||||||||||||    
T  7398434 aaaaacatccacgtaacaccaaaagcaagaggacccaattctaataggcct 7398384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 688
Target Start/End: Original strand, 26917909 - 26917963
Alignment:
Q  634 tctgatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataagaa 688  Q
    |||||||||||||| |||||||||| | |||||||||| | ||||||||||||||    
T  26917909 tctgatggagtgatggtgatgaaacacatggtatcagatagaaagagaataagaa 26917963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 429 - 502
Target Start/End: Original strand, 17800257 - 17800330
Alignment:
Q  429 atacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaacca 502  Q
    ||||||| || ||||||||||   |||||||||| ||||||||||||| ||||| |||||||||  ||||||||    
T  17800257 atacaagttgtcgtatatatgttgtacacccaaaagtgaaaatcactaccgtatgcatgaggaatttcaaacca 17800330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 527 - 576
Target Start/End: Original strand, 17800341 - 17800390
Alignment:
Q  527 aaaacatctacttaacaccaaaaggaagaggactcaattctaataggcct 576  Q
    |||||||| || |||||||||||| |||||||| ||||||||||||||||    
T  17800341 aaaacatccacctaacaccaaaagcaagaggacccaattctaataggcct 17800390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 414 - 474
Target Start/End: Original strand, 26917728 - 26917788
Alignment:
Q  414 ttttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcac 474  Q
    |||||||||| | ||||||||| || |||||||||| |||||| | |||||||||||||||    
T  26917728 ttttttaaaagaaaaatacaagatgacgtatatatgtgatacatctaaatgtgaaaatcac 26917788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 448
Target Start/End: Original strand, 9014182 - 9014233
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatat 448  Q
    |||||||| |||||||||||||||||| |||||||||| |||  ||||||||    
T  9014182 acaatgttttatttaaattttttaaaagataaatacaatgtgttgtatatat 9014233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 638 - 688
Target Start/End: Complemental strand, 20153074 - 20153024
Alignment:
Q  638 atggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataagaa 688  Q
    |||||||||| |||||| |||| ||||||||||||| |||||||| |||||    
T  20153074 atggagtgatggtgatggaacgtgtggtatcagagagaaagagaacaagaa 20153024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 453 - 494
Target Start/End: Complemental strand, 25010475 - 25010434
Alignment:
Q  453 tacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||| |||||||| |||| |||||||||||||||||    
T  25010475 tacacccaaaggtgaaaatgactaccgtatacatgaggaacc 25010434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 637 - 682
Target Start/End: Original strand, 27237653 - 27237698
Alignment:
Q  637 gatggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaa 682  Q
    ||||||||||| |||||| |||||||||||||||||| | ||||||    
T  27237653 gatggagtgatggtgatggaacgcgtggtatcagagagatagagaa 27237698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 539 - 576
Target Start/End: Original strand, 48983952 - 48983989
Alignment:
Q  539 taacaccaaaaggaagaggactcaattctaataggcct 576  Q
    |||||||||||| ||||||||| |||||||||||||||    
T  48983952 taacaccaaaagtaagaggacttaattctaataggcct 48983989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 6e-33; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 397 - 501
Target Start/End: Original strand, 54574832 - 54574936
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    |||||||||||||||||||||| |||| ||||||||||||| ||||||||||||| |||||||||| || |||||||||| | |||||||||||||||||    
T  54574832 acaatgttctatttaaatttttcaaaatataaatacaaggtaccgtatatatgcggtacacccaaaagtaaaaatcactaccatatacatgaggaacctc 54574931  T
Q  497 aaacc 501  Q
    |||||    
T  54574932 aaacc 54574936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 399 - 502
Target Start/End: Complemental strand, 8420425 - 8420322
Alignment:
Q  399 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 498  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||   |||||||||||||||||||||||  |||||| | ||||||||||||    
T  8420425 aatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgttgtacacccaaatgtgaaaatcactgccgtatatacgaggaacctcaa 8420326  T
Q  499 acca 502  Q
    ||||    
T  8420325 acca 8420322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 400 - 494
Target Start/End: Complemental strand, 47467782 - 47467688
Alignment:
Q  400 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||| |||| |||||||||||||||||    
T  47467782 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccgtatacatgaggaacc 47467688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 54619209 - 54619305
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||| |||| |||||||||||||||||    
T  54619209 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 54619305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 399 - 494
Target Start/End: Original strand, 8073345 - 8073440
Alignment:
Q  399 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    ||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  8073345 aatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacc 8073440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 392 - 494
Target Start/End: Original strand, 34290636 - 34290738
Alignment:
Q  392 aaaagacaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagga 491  Q
    |||| ||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||||| |||| |||||| |||||||    
T  34290636 aaaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgagga 34290735  T
Q  492 acc 494  Q
    |||    
T  34290736 acc 34290738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 397 - 494
Target Start/End: Complemental strand, 21582872 - 21582775
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||| |||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||| |||| |||||||||||||||||    
T  21582872 acaatgttttatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 21582775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 399 - 494
Target Start/End: Complemental strand, 44708576 - 44708481
Alignment:
Q  399 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||||||||| || |||||||||| |||||||| |||| |||||||||||||||||    
T  44708576 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatccggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 44708481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 392 - 494
Target Start/End: Original strand, 53506884 - 53506986
Alignment:
Q  392 aaaagacaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagga 491  Q
    |||| ||||||||||||||| ||||||||||| ||||||| ||||| ||||||||||||| |||||||||| |||||||| |||| |||||||||||| |    
T  53506884 aaaaaacaatgttctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaa 53506983  T
Q  492 acc 494  Q
    |||    
T  53506984 acc 53506986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 397 - 494
Target Start/End: Original strand, 3953901 - 3953998
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||| |  | |||||||||||||||||    
T  3953901 acaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgaaaaccgtatacatgaggaacc 3953998  T

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Target: chr3; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 399 - 500
Target Start/End: Original strand, 28689368 - 28689469
Alignment:
Q  399 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 498  Q
    |||||||||||||||||||  |||| |||||||||||||||||||||||||||||| | ||||| ||||||||||||  |||||||||||| || |||||    
T  28689368 aatgttctatttaaattttcaaaaagataaatacaaggtgccgtatatatgcgatatatccaaaggtgaaaatcactgccgtatacatgagaaatctcaa 28689467  T
Q  499 ac 500  Q
    ||    
T  28689468 ac 28689469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 399 - 500
Target Start/End: Original strand, 32319162 - 32319263
Alignment:
Q  399 aatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 498  Q
    ||||||||||||||||||||||||| |||||||||| |||  ||||||||||| |||||||||| |||||||| |||||| |||| | ||||||||||||    
T  32319162 aatgttctatttaaattttttaaaagataaatacaaagtgttgtatatatgcggtacacccaaaggtgaaaattactatcttatatacgaggaacctcaa 32319261  T
Q  499 ac 500  Q
    ||    
T  32319262 ac 32319263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 392 - 493
Target Start/End: Complemental strand, 37168473 - 37168372
Alignment:
Q  392 aaaagacaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagga 491  Q
    |||| ||||||||||||||| ||||||||||| ||||||| ||||||||||||||||| | || ||||||| |||||||| |||| ||||||||||||||    
T  37168473 aaaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgtggtatacccaaaggtgaaaatgactaccgtatacatgagga 37168374  T
Q  492 ac 493  Q
    ||    
T  37168373 ac 37168372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 9878693 - 9878789
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||| ||||||||| ||||||||||| ||||||| ||||||| ||||||||||| |||||||||| |||||||| |||||||||||||| |||||||    
T  9878693 caatattctatttatattttttaaaagataaatataaggtgcagtatatatgcggtacacccaaaggtgaaaatgactatcgtatacataaggaacc 9878789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 26279643 - 26279536
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcact--atcgtatacatgaggaacc 494  Q
    ||||||||||||||||||||||||||| ||||||| |||||| ||||||||||| |||||||||||  |||||||||||  |   |||||||||||||||    
T  26279643 acaatgttctatttaaattttttaaaagataaatagaaggtgtcgtatatatgcaatacacccaaagatgaaaatcactacacattatacatgaggaacc 26279544  T
Q  495 tcaaacca 502  Q
    ||||||||    
T  26279543 tcaaacca 26279536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 398 - 492
Target Start/End: Original strand, 38681099 - 38681193
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaa 492  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||| |||||| |||| ||| | |||||||| |||| |||||||||||||||    
T  38681099 caatgttctatttatattttttaaaagataaatacaaggtgccgtatgtatgcggtacatccagaggtgaaaatgactaccgtatacatgaggaa 38681193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 400 - 494
Target Start/End: Complemental strand, 42098899 - 42098805
Alignment:
Q  400 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||| || || || | |||||||| |||| |||||||||||||||||    
T  42098899 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatacatgaggaacc 42098805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 392 - 486
Target Start/End: Original strand, 54407158 - 54407252
Alignment:
Q  392 aaaagacaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacat 486  Q
    |||| ||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| |||| ||||| |||||||| |||| |||||||||    
T  54407158 aaaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacat 54407252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 27078575 - 27078671
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| |||||||||| |||||||||||||||| || ||||| | |||||||| |||| |||||||||||| ||||    
T  27078575 caatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgagaaacc 27078671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 27084372 - 27084468
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| |||||||||| |||||||||||||||| || ||||| | |||||||| |||| |||||||||||| ||||    
T  27084372 caatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgagaaacc 27084468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 43207244 - 43207339
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| ||||  |||| |||||||| |||| |||||||||||||||||    
T  43207244 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtaca-tcaaaggtgaaaatgactaccgtatacatgaggaacc 43207339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 400 - 494
Target Start/End: Original strand, 53149322 - 53149416
Alignment:
Q  400 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||| || |  | ||||| |||| |||||||||||||||||    
T  53149322 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagagataaaaatgactaccgtatacatgaggaacc 53149416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 790037 - 789932
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||| ||||||||||||||||||||  |||||||||||||| | ||||||||   |||||||||| || |||||||| | | |||||||||||||||||    
T  790037 acaatcttctatttaaattttttaaacaataaatacaaggtgtcatatatatgttgtacacccaaaggtaaaaatcaccaccatatacatgaggaacctc 789938  T
Q  497 aaacca 502  Q
    ||||||    
T  789937 aaacca 789932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 25855522 - 25855418
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||||||||||||||||||||||||| |||| ||||||||| ||||||||||   | ||||||||  |||||||||||| |||||||| || |||||||    
T  25855522 acaatgttctatttaaattttttaaaagataa-tacaaggtgtcgtatatatgtagtgcacccaaagttgaaaatcactaccgtatacacgaagaacctc 25855424  T
Q  497 aaacca 502  Q
    ||||||    
T  25855423 aaacca 25855418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 398 - 470
Target Start/End: Original strand, 36716031 - 36716103
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaa 470  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||    
T  36716031 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaa 36716103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 50939239 - 50939335
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    ||||| |||||||| ||||||||||| ||||||| ||||||||||||||||  | |||||||||| || ||||| |||| |||||||||||||||||    
T  50939239 caatgatctatttatattttttaaaagataaatataaggtgccgtatatatatggtacacccaaaggtaaaaatgactaccgtatacatgaggaacc 50939335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 42453505 - 42453407
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||||||| ||||||||||||||||| |||||||||||||| | ||||||||||||||||| ||| ||||       || |||||||||||||||||||    
T  42453505 acaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgaggaacctc 42453413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 49393190 - 49393090
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    |||||||||| |||||||||||||||| |||||||||||| | |||||||||| | |||||||||| || ||||| |||| ||||||||||| |||||||    
T  49393190 acaatgttctctttaaattttttaaaagataaatacaaggcgtcgtatatatgtg-tacacccaaaggtaaaaattactaccgtatacatga-gaacctc 49393093  T
Q  497 aaa 499  Q
    |||    
T  49393092 aaa 49393090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 398 - 490
Target Start/End: Complemental strand, 36606065 - 36605973
Alignment:
Q  398 caatgttctatttaaattttttaaaac-ataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagg 490  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||||||||| |||||||| |  ||||||| |||| |||||||||||||    
T  36606065 caatgttctatttatattttttaaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaat-actaccgtatacatgagg 36605973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 52374757 - 52374652
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    |||||||||||||||||||||||   | |||||||||| ||| |||||| |||||||||| | ||| | ||||||||||| ||||||||||| |||||||    
T  52374757 acaatgttctatttaaatttttttttaaataaatacaatgtgtcgtatagatgcgatacatctaaaggagaaaatcactaccgtatacatgaagaacctc 52374658  T
Q  497 aaacca 502  Q
    | ||||    
T  52374657 atacca 52374652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 400 - 494
Target Start/End: Original strand, 50258631 - 50258726
Alignment:
Q  400 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacaccc-aaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||||  |  |||||||| ||||| |||| |||||||||||    
T  50258631 atgttctatttatattttttaaaaaataaatacaaggtgtcgtatatatgcggtacacccggagggtgaaaatgactattgtatgcatgaggaacc 50258726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 398 - 492
Target Start/End: Complemental strand, 18372583 - 18372485
Alignment:
Q  398 caatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcga----tacacccaaatgtgaaaatcactatcgtatacatgaggaa 492  Q
    |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||     ||||| || | |||||||| |||| |||||||||||||||    
T  18372583 caatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcgcgcggtacacacagaggtgaaaatgactaccgtatacatgaggaa 18372485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 425 - 502
Target Start/End: Complemental strand, 29598179 - 29598103
Alignment:
Q  425 ataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaacca 502  Q
    ||||||||||||| ||||||||||| ||||||| ||||  ||||| |||||| ||||||||||||||| |||||||||    
T  29598179 ataaatacaaggttccgtatatatgtgatacactcaaagatgaaa-tcactaccgtatacatgaggaatctcaaacca 29598103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 427 - 494
Target Start/End: Original strand, 29620423 - 29620490
Alignment:
Q  427 aaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    ||||||||||||||||||||||||| || | ||| | |||||||| |||| |||||||||||||||||    
T  29620423 aaatacaaggtgccgtatatatgcggtatatccagaggtgaaaatgactaccgtatacatgaggaacc 29620490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 526 - 576
Target Start/End: Complemental strand, 42453398 - 42453348
Alignment:
Q  526 aaaaacatctacttaacaccaaaaggaagaggactcaattctaataggcct 576  Q
    |||| ||||||  |||||||||||| |||||||||||||||||||||||||    
T  42453398 aaaaccatctatctaacaccaaaagtaagaggactcaattctaataggcct 42453348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 23641329 - 23641382
Alignment:
Q  403 ttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgataca 456  Q
    ||||||||| ||||||||||| |||||||||| ||| |||||||||||| ||||    
T  23641329 ttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtaca 23641382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 539 - 576
Target Start/End: Complemental strand, 52374631 - 52374594
Alignment:
Q  539 taacaccaaaaggaagaggactcaattctaataggcct 576  Q
    |||||||||||| |||||||||||||||||||||||||    
T  52374631 taacaccaaaagcaagaggactcaattctaataggcct 52374594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 639 - 686
Target Start/End: Complemental strand, 26279413 - 26279366
Alignment:
Q  639 tggagtgattgtgatgaaacgcgtggtatcagagaaaaagagaataag 686  Q
    ||||||||| |||||| |||| ||||||||||||| ||||||||||||    
T  26279413 tggagtgatggtgatggaacgtgtggtatcagagagaaagagaataag 26279366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 66; Significance: 9e-29; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 23998 - 24103
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    ||||| ||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||| |||||||||| || ||||| ||| ||||| |||    
T  23998 acaatattctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatcattaccgtatgcataaggaatctc 24097  T
Q  497 aaacca 502  Q
    ||||||    
T  24098 aaacca 24103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 66; Significance: 9e-29; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 397 - 494
Target Start/End: Complemental strand, 106636 - 106539
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    ||||||||||||||| ||||||||||| ||||||| |||||| |||||||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  106636 acaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 106539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 230864 - 230969
Alignment:
Q  397 acaatgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 496  Q
    |||||||||||||||||||| |||||| ||||||  ||||||  |||||||||||||| ||||||| ||||||||||||| | |||||||||||||| ||    
T  230864 acaatgttctatttaaatttgttaaaagataaatttaaggtgttgtatatatgcgatatacccaaaggtgaaaatcactaccttatacatgaggaacttc 230963  T
Q  497 aaacca 502  Q
    ||||||    
T  230964 aaacca 230969  T

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Target: scaffold0070 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 401 - 494
Target Start/End: Complemental strand, 1437 - 1344
Alignment:
Q  401 tgttctatttaaattttttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||||||||||| |||||||| |  ||||||| |||| |||||||||||||||||    
T  1437 tgttctatttatattttttaaaagataaatacaagctgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacc 1344  T

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Target: scaffold0022 (Bit Score: 57; Significance: 2e-23; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 40185 - 40078
Alignment:
Q  397 acaatgttctatttaaatttttt--aaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||||| ||||||  |||| |||||||||||||||||||| ||||   ||||||| || ||||||||||| |||||||||||||| ||||    
T  40185 acaatgttctatttaatttttttttaaaagataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatgagcaacc 40086  T
Q  495 tcaaacca 502  Q
    ||||||||    
T  40085 tcaaacca 40078  T

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Target: scaffold0022; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 138245 - 138138
Alignment:
Q  397 acaatgttctatttaaatttttt--aaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 494  Q
    |||||||||||||||| ||||||  |||| |||||||||||||||||||| ||||   ||||||| || ||||||||||| |||||||||||||| ||||    
T  138245 acaatgttctatttaatttttttttaaaagataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatgagcaacc 138146  T
Q  495 tcaaacca 502  Q
    ||||||||    
T  138145 tcaaacca 138138  T

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Target: scaffold0022; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 526 - 576
Target Start/End: Complemental strand, 40066 - 40016
Alignment:
Q  526 aaaaacatctacttaacaccaaaaggaagaggactcaattctaataggcct 576  Q
    ||||||||| || |||||| ||||| |||||||| ||||||||||||||||    
T  40066 aaaaacatccacctaacacaaaaagcaagaggacccaattctaataggcct 40016  T

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Target: scaffold0022; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 526 - 576
Target Start/End: Complemental strand, 138126 - 138076
Alignment:
Q  526 aaaaacatctacttaacaccaaaaggaagaggactcaattctaataggcct 576  Q
    ||||||||| || |||||| ||||| |||||||| ||||||||||||||||    
T  138126 aaaaacatccacctaacacaaaaagcaagaggacccaattctaataggcct 138076  T

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Target: scaffold0227 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 427 - 502
Target Start/End: Complemental strand, 16095 - 16020
Alignment:
Q  427 aaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaacca 502  Q
    ||||||||| || ||||| |||||| |||| |||||  |||||||||||| |||||||||||| ||||||||||||    
T  16095 aaatacaagatgtcgtatgtatgcggtacatccaaagatgaaaatcactaccgtatacatgagaaacctcaaacca 16020  T

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Target: scaffold0227; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 399 - 437
Target Start/End: Complemental strand, 16161 - 16123
Alignment:
Q  399 aatgttctatttaaattttttaaaacataaatacaaggt 437  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  16161 aatgttctatttaaattttttaaaagataaatacaaggt 16123  T

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Target: scaffold0202 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 232
Target Start/End: Original strand, 2255 - 2324
Alignment:
Q  160 ggatttattgcacaatgcattgggtgcagagctgaaatattaaagcaccacctctttgcaagaggcagctttg 232  Q
    ||||||||||||||||| | |||||||  ||||||||||||||||   |||||||||||||||||| ||||||    
T  2255 ggatttattgcacaatgtagtgggtgcgtagctgaaatattaaag---cacctctttgcaagaggccgctttg 2324  T

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Target: scaffold0202; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 2769 - 2811
Alignment:
Q  286 tgaacatttcaaataactccacaagtttgttatctgaatgtaa 328  Q
    |||||||||| || ||||||||||||||||||||| |||||||    
T  2769 tgaacatttcgaagaactccacaagtttgttatctaaatgtaa 2811  T

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Target: scaffold0003 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 418 - 502
Target Start/End: Original strand, 351360 - 351444
Alignment:
Q  418 ttaaaacataaatacaaggtgccgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaacca 502  Q
    |||||| |||||||||||||| ||||||||||   |||||||||| ||||||||| |||  | ||||| |||| |||||||||||    
T  351360 ttaaaagataaatacaaggtgtcgtatatatgttgtacacccaaaggtgaaaatcgctactgaatacacgaggtacctcaaacca 351444  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 449
Target Start/End: Complemental strand, 183155 - 183106
Alignment:
Q  400 atgttctatttaaattttttaaaacataaatacaaggtgccgtatatatg 449  Q
    |||||||||||| ||||||||||| |||||||||| ||  ||||||||||    
T  183155 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatg 183106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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