View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1753_high_4 (Length: 249)
Name: NF1753_high_4
Description: NF1753
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1753_high_4 |
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Alignment Details
Target: chr8 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 29659648 - 29659417
Alignment:
| Q |
1 |
ttttgactgcatgtttgaattgacagtgaatttgacaaaattatcttagaattttaattttgttaaaattatagtgacacaacgtgatttcgaccaatcc |
100 |
Q |
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| T |
29659648 |
ttttgactgtatgtttgaattgatggtgaatttcacaaagttattttagcattttaattttgttaaaattatagtgacaca--gtgattttgaccaatcc |
29659551 |
T |
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| Q |
101 |
caatatatacattgctgtaatatatttttgtttgaggagatttatgtagttcacactctcttcctcctttttaagatcatacaaatacaaataaacgatc |
200 |
Q |
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| T |
29659550 |
caatatatacattgctgtaatatatttttgtttgaggagatttatgtagttcacactcccttcctcctttttaagatcatacaaatacaaataaacgatc |
29659451 |
T |
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| Q |
201 |
tttgtcaatattgaggttgcctaaaaaggaaaat |
234 |
Q |
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||||||||||||||||||||||| |||||||||| |
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| T |
29659450 |
tttgtcaatattgaggttgcctagaaaggaaaat |
29659417 |
T |
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