View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17541_high_3 (Length: 229)
Name: NF17541_high_3
Description: NF17541
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17541_high_3 |
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Alignment Details
Target: chr4 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 26028856 - 26029050
Alignment:
| Q |
21 |
tctagaggctcactatgaacggagtaagttttaaaattcagagaatattgatagacataatgatatttacaggttcaacgagagttgaaccaatgttctt |
120 |
Q |
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| T |
26028856 |
tctagaggctcactatggacggagtaagttttaaaattcaaagaatattgatagacataatgatatttacaggttcaacgagagttgaacctatgttctt |
26028955 |
T |
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| Q |
121 |
acgtggtatgagtcaactccttaacaataaaaccaatttacattctcatttcatactattatttgatatttgattcaacggtaattgatttttct |
215 |
Q |
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|||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
26028956 |
acgtggtatgagtcaactccttaacaataagaccaacttacattctcattttatactattatttgatatttgattcaacagtaattgatttttct |
26029050 |
T |
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