View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17542_high_8 (Length: 320)

Name: NF17542_high_8
Description: NF17542
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17542_high_8
NF17542_high_8
[»] chr6 (27 HSPs)
chr6 (123-320)||(16566327-16566524)
chr6 (123-320)||(188984-189181)
chr6 (123-320)||(17684476-17684673)
chr6 (123-320)||(17691447-17691644)
chr6 (123-320)||(25537166-25537363)
chr6 (123-320)||(11651726-11651923)
chr6 (123-320)||(29308893-29309090)
chr6 (123-320)||(29315853-29316050)
chr6 (123-320)||(27381259-27381456)
chr6 (123-320)||(27471642-27471839)
chr6 (123-320)||(13359276-13359473)
chr6 (159-320)||(20553594-20553755)
chr6 (28-82)||(17691683-17691737)
chr6 (26-75)||(27381502-27381551)
chr6 (26-75)||(27471885-27471934)
chr6 (26-82)||(29308798-29308854)
chr6 (26-82)||(29315758-29315814)
chr6 (139-313)||(8509941-8510116)
chr6 (26-82)||(17684712-17684768)
chr6 (143-314)||(27925772-27925948)
chr6 (26-80)||(11651630-11651684)
chr6 (158-320)||(17850502-17850663)
chr6 (26-82)||(25537405-25537461)
chr6 (127-182)||(31258065-31258120)
chr6 (34-82)||(13359512-13359560)
chr6 (34-82)||(16566563-16566611)
chr6 (24-82)||(189221-189282)
[»] scaffold0234 (4 HSPs)
scaffold0234 (123-320)||(2328-2525)
scaffold0234 (123-320)||(11219-11416)
scaffold0234 (26-82)||(2564-2620)
scaffold0234 (26-82)||(11455-11511)
[»] scaffold0063 (2 HSPs)
scaffold0063 (123-320)||(5532-5729)
scaffold0063 (34-82)||(5444-5492)
[»] chr4 (44 HSPs)
chr4 (123-320)||(4426611-4426807)
chr4 (123-320)||(5707323-5707520)
chr4 (123-320)||(19926767-19926964)
chr4 (123-320)||(5713951-5714148)
chr4 (123-320)||(26970466-26970663)
chr4 (123-320)||(28393141-28393338)
chr4 (123-320)||(55612686-55612883)
chr4 (126-320)||(868603-868797)
chr4 (132-318)||(8845215-8845401)
chr4 (132-318)||(8858179-8858365)
chr4 (123-320)||(18262215-18262412)
chr4 (123-320)||(26963643-26963840)
chr4 (123-320)||(10621340-10621537)
chr4 (123-320)||(10628419-10628616)
chr4 (123-320)||(18269071-18269273)
chr4 (123-235)||(12357139-12357251)
chr4 (128-319)||(20311299-20311491)
chr4 (126-320)||(10677562-10677753)
chr4 (126-320)||(10891202-10891393)
chr4 (126-320)||(35223576-35223760)
chr4 (126-320)||(5668132-5668327)
chr4 (123-265)||(5616216-5616358)
chr4 (25-82)||(19927003-19927060)
chr4 (26-82)||(5713856-5713912)
chr4 (26-82)||(26963548-26963604)
chr4 (26-82)||(26970371-26970427)
chr4 (26-82)||(5707228-5707284)
chr4 (26-82)||(10621576-10621632)
chr4 (26-82)||(12357044-12357100)
chr4 (28-82)||(868507-868561)
chr4 (25-82)||(17142372-17142429)
chr4 (26-82)||(10628655-10628711)
chr4 (26-82)||(55612594-55612650)
chr4 (24-82)||(4426847-4426905)
chr4 (146-319)||(21454145-21454319)
chr4 (26-80)||(28393380-28393434)
chr4 (26-82)||(18268976-18269032)
chr4 (169-236)||(39074278-39074346)
chr4 (33-82)||(55992680-55992729)
chr4 (257-316)||(39074211-39074270)
chr4 (41-82)||(5668371-5668412)
chr4 (34-82)||(8845118-8845166)
chr4 (34-82)||(8858082-8858130)
chr4 (42-82)||(18262136-18262176)
[»] chr3 (53 HSPs)
chr3 (123-320)||(13211305-13211502)
chr3 (123-320)||(18522666-18522863)
chr3 (126-320)||(17781125-17781319)
chr3 (123-320)||(6110067-6110264)
chr3 (123-320)||(10572599-10572796)
chr3 (123-320)||(16482490-16482687)
chr3 (123-320)||(18519981-18520175)
chr3 (126-320)||(10579362-10579556)
chr3 (126-320)||(15600891-15601085)
chr3 (126-320)||(15607436-15607630)
chr3 (123-320)||(17200191-17200388)
chr3 (126-320)||(19089752-19089946)
chr3 (123-320)||(13248610-13248807)
chr3 (123-320)||(13516814-13517011)
chr3 (126-320)||(15357593-15357787)
chr3 (126-320)||(32056907-32057101)
chr3 (123-306)||(8490491-8490674)
chr3 (123-281)||(18640792-18640950)
chr3 (126-320)||(1647528-1647726)
chr3 (139-320)||(15342226-15342407)
chr3 (126-319)||(29924977-29925170)
chr3 (126-319)||(29974130-29974323)
chr3 (123-308)||(16200129-16200313)
chr3 (123-308)||(16200435-16200619)
chr3 (127-320)||(24253395-24253589)
chr3 (226-320)||(17136465-17136559)
chr3 (123-184)||(18534759-18534820)
chr3 (26-82)||(6109972-6110028)
chr3 (26-82)||(8490396-8490452)
chr3 (26-82)||(13248515-13248571)
chr3 (26-82)||(13211211-13211267)
chr3 (26-82)||(18640989-18641045)
chr3 (26-75)||(10579604-10579653)
chr3 (26-82)||(17136137-17136193)
chr3 (26-75)||(10572841-10572890)
chr3 (26-82)||(15607672-15607729)
chr3 (26-75)||(17200434-17200483)
chr3 (26-82)||(15351237-15351293)
chr3 (26-82)||(15357829-15357885)
chr3 (26-82)||(16482727-16482782)
chr3 (123-163)||(18510925-18510965)
chr3 (26-82)||(18519885-18519941)
chr3 (25-82)||(1647768-1647825)
chr3 (26-82)||(15601127-15601184)
chr3 (26-82)||(13516719-13516775)
chr3 (26-70)||(17781370-17781414)
chr3 (26-70)||(19089997-19090041)
chr3 (26-82)||(32057144-32057200)
chr3 (26-82)||(18510829-18510885)
chr3 (26-82)||(18522570-18522626)
chr3 (34-82)||(18534671-18534719)
chr3 (26-82)||(29924879-29924935)
chr3 (26-82)||(29974032-29974088)
[»] chr1 (26 HSPs)
chr1 (123-320)||(18252033-18252230)
chr1 (123-320)||(21171240-21171437)
chr1 (123-320)||(27131416-27131613)
chr1 (123-320)||(27310584-27310781)
chr1 (123-320)||(16359042-16359239)
chr1 (123-312)||(18532529-18532718)
chr1 (126-320)||(36816640-36816834)
chr1 (123-320)||(3855926-3856123)
chr1 (126-320)||(22657228-22657423)
chr1 (126-320)||(27277564-27277756)
chr1 (154-319)||(12014292-12014457)
chr1 (154-267)||(12006599-12006712)
chr1 (25-82)||(18251935-18251992)
chr1 (25-82)||(18532757-18532814)
chr1 (26-82)||(27310821-27310877)
chr1 (132-318)||(9917927-9918106)
chr1 (26-82)||(16359280-16359336)
chr1 (26-82)||(21171479-21171535)
chr1 (26-75)||(22657472-22657521)
chr1 (126-195)||(30720625-30720694)
chr1 (34-75)||(36816885-36816926)
chr1 (26-82)||(3856164-3856220)
chr1 (26-82)||(27131652-27131704)
chr1 (150-222)||(3403248-3403320)
chr1 (150-222)||(3443499-3443571)
chr1 (26-82)||(27277800-27277856)
[»] chr8 (18 HSPs)
chr8 (126-320)||(24642655-24642849)
chr8 (126-319)||(6094129-6094322)
chr8 (125-320)||(21940670-21940865)
chr8 (123-320)||(28554886-28555083)
chr8 (123-320)||(22171492-22171687)
chr8 (126-253)||(24636860-24636987)
chr8 (132-320)||(38232384-38232570)
chr8 (25-82)||(22070107-22070164)
chr8 (26-82)||(21940573-21940629)
chr8 (141-319)||(2375027-2375203)
chr8 (26-75)||(24642556-24642605)
chr8 (26-82)||(6094031-6094087)
chr8 (26-82)||(22171396-22171452)
chr8 (26-82)||(28554791-28554847)
chr8 (168-221)||(10920244-10920297)
chr8 (224-272)||(30200270-30200318)
chr8 (150-220)||(32872948-32873019)
chr8 (26-63)||(24636605-24636642)
[»] chr7 (26 HSPs)
chr7 (123-320)||(15152446-15152643)
chr7 (123-320)||(29327787-29327984)
chr7 (123-320)||(11536069-11536266)
chr7 (123-320)||(18561010-18561207)
chr7 (125-320)||(11542987-11543182)
chr7 (123-320)||(12750829-12751026)
chr7 (123-320)||(15148145-15148342)
chr7 (126-320)||(12738542-12738736)
chr7 (123-319)||(18257850-18258046)
chr7 (126-308)||(13392157-13392338)
chr7 (142-316)||(2364917-2365090)
chr7 (25-82)||(2653275-2653332)
chr7 (153-313)||(7396221-7396382)
chr7 (25-82)||(12738442-12738499)
chr7 (26-82)||(11543223-11543279)
chr7 (126-213)||(39111819-39111905)
chr7 (26-82)||(11536305-11536361)
chr7 (26-82)||(12750733-12750789)
chr7 (26-82)||(15152350-15152406)
chr7 (26-81)||(29327690-29327745)
chr7 (26-82)||(15148049-15148105)
chr7 (194-255)||(3132748-3132809)
chr7 (26-81)||(13392030-13392085)
chr7 (170-235)||(10234179-10234244)
chr7 (26-82)||(18258087-18258143)
chr7 (123-152)||(2653207-2653236)
[»] chr5 (20 HSPs)
chr5 (123-320)||(24695473-24695670)
chr5 (126-320)||(18569870-18570064)
chr5 (123-320)||(19714505-19714702)
chr5 (126-320)||(19707225-19707419)
chr5 (126-320)||(22547023-22547217)
chr5 (125-314)||(27347491-27347679)
chr5 (124-305)||(17285754-17285935)
chr5 (126-222)||(39537968-39538064)
chr5 (124-305)||(17298907-17299088)
chr5 (186-320)||(18807041-18807175)
chr5 (26-82)||(24695709-24695765)
chr5 (126-257)||(31886537-31886668)
chr5 (26-82)||(19714742-19714798)
chr5 (233-320)||(39538701-39538788)
chr5 (26-82)||(19707462-19707518)
chr5 (26-82)||(27347722-27347778)
chr5 (34-82)||(18570108-18570156)
chr5 (26-81)||(39537870-39537925)
chr5 (146-236)||(33477389-33477479)
chr5 (170-245)||(11479420-11479496)
[»] chr2 (11 HSPs)
chr2 (126-312)||(21330263-21330449)
chr2 (139-320)||(18796525-18796706)
chr2 (127-318)||(18619812-18620002)
chr2 (126-265)||(19692598-19692737)
chr2 (185-320)||(20977957-20978092)
chr2 (25-82)||(21330493-21330550)
chr2 (154-320)||(36270199-36270366)
chr2 (154-312)||(18822115-18822275)
chr2 (156-311)||(36802664-36802820)
chr2 (165-313)||(24471642-24471789)
chr2 (26-82)||(19692773-19692829)
[»] scaffold0390 (4 HSPs)
scaffold0390 (123-320)||(6941-7138)
scaffold0390 (123-320)||(13957-14154)
scaffold0390 (26-82)||(7177-7233)
scaffold0390 (26-82)||(14193-14249)
[»] scaffold0433 (2 HSPs)
scaffold0433 (127-320)||(7114-7307)
scaffold0433 (26-82)||(7015-7071)
[»] scaffold0220 (2 HSPs)
scaffold0220 (123-320)||(18291-18488)
scaffold0220 (26-82)||(18196-18252)
[»] scaffold0186 (2 HSPs)
scaffold0186 (126-320)||(25997-26191)
scaffold0186 (26-81)||(26231-26286)
[»] scaffold0657 (2 HSPs)
scaffold0657 (126-320)||(999-1193)
scaffold0657 (25-82)||(900-957)
[»] scaffold0008 (2 HSPs)
scaffold0008 (123-299)||(230369-230544)
scaffold0008 (26-82)||(230584-230640)
[»] scaffold0176 (2 HSPs)
scaffold0176 (126-184)||(8446-8504)
scaffold0176 (26-82)||(8546-8602)
[»] scaffold0203 (1 HSPs)
scaffold0203 (26-82)||(23769-23825)
[»] scaffold0326 (1 HSPs)
scaffold0326 (26-74)||(16523-16571)
[»] scaffold0705 (1 HSPs)
scaffold0705 (26-82)||(41-97)
[»] scaffold0637 (1 HSPs)
scaffold0637 (26-82)||(8944-9000)
[»] scaffold0767 (1 HSPs)
scaffold0767 (21-62)||(1-42)
[»] scaffold0565 (1 HSPs)
scaffold0565 (28-82)||(10202-10256)
[»] scaffold0032 (1 HSPs)
scaffold0032 (189-271)||(92235-92317)
[»] scaffold0170 (1 HSPs)
scaffold0170 (26-75)||(5878-5927)


Alignment Details
Target: chr6 (Bit Score: 174; Significance: 1e-93; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 123 - 320
Target Start/End: Complemental strand, 16566524 - 16566327
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16566524 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 16566425  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  16566424 ccgttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 16566327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 123 - 320
Target Start/End: Complemental strand, 189181 - 188984
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  189181 aggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 189082  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || ||||||||||||||| ||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  189081 ccattaaacataaggaaactattcttaaagtatttgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagac 188984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 123 - 320
Target Start/End: Complemental strand, 17684673 - 17684476
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684673 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 17684574  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||  ||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  17684573 ccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagac 17684476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 123 - 320
Target Start/End: Complemental strand, 17691644 - 17691447
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17691644 aggcatttctttattgattttgttttctttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 17691545  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || ||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  17691544 ccattaaacataaggaaactattcttaaagtatccgtagtcaagctttagtgagaagtgggatatcattaaagcataaagactattatgtaggtagac 17691447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 123 - 320
Target Start/End: Complemental strand, 25537363 - 25537166
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  25537363 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtccgtttaatggaacattaagtataactttattgtgagacc 25537264  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  25537263 ccgttaaacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtagac 25537166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 123 - 320
Target Start/End: Original strand, 11651726 - 11651923
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11651726 aggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 11651825  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || ||||| ||||||||| |||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  11651826 ccattaaaaataaggaaactattctaaaagtatcagtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagac 11651923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 123 - 320
Target Start/End: Original strand, 29308893 - 29309090
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  29308893 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagagc 29308992  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  29308993 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 29309090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 123 - 320
Target Start/End: Original strand, 29315853 - 29316050
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  29315853 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagagc 29315952  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  29315953 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 29316050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 123 - 320
Target Start/End: Complemental strand, 27381456 - 27381259
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381456 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 27381357  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || ||||||||| ||||| |||||| ||||||||| |||||||||||| |||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  27381356 ccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 27381259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 123 - 320
Target Start/End: Complemental strand, 27471839 - 27471642
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471839 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 27471740  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || ||||||||| ||||| |||||| ||||||||| |||||||||||| |||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  27471739 ccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 27471642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 123 - 320
Target Start/End: Complemental strand, 13359473 - 13359276
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    |||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||| || |||||||| |||||||||||||||||| |||| ||     
T  13359473 aggcatttatttatttattttgttttgtttcaaaataataaagtccctagaatagttagttcgcttaatggagcattaagtataacttaatcgtgaaact 13359374  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || ||||||||||  | |||||| ||||||||||||||||||| ||||||||  || || || | ||||||||| || |||||||||| ||| |||||    
T  13359373 ccattaaacataaaaacattatttttaaagtatccgtagtcaacctttattgtgaaatgggacaacattaaagcgtagagactattatatggatagac 13359276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 159 - 320
Target Start/End: Complemental strand, 20553755 - 20553594
Alignment:
Q  159 aataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaagtatccg 258  Q
    ||||| ||| |||| |||| |||||||||||||| || ||||||||  ||||||| |||||| ||| ||||| ||||| | ||||||||||||| |||||    
T  20553755 aataaagtctctaggatagctagtccgtttaatgaaatattaagtacgacttaatcgtgagatcccattaaatataagaatattattcttaaagcatccg 20553656  T
Q  259 tagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    |||| ||  |||||||  ||||||||||  ||||||||||| ||| | |||||| |||||||    
T  20553655 tagtgaatttttattgtgaagtgagataaaattaaagcataaagatttttatgttggtagac 20553594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 17691737 - 17691683
Alignment:
Q  28 ttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17691737 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 17691683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 27381551 - 27381502
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381551 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 27381502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 27471934 - 27471885
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471934 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 27471885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 29308798 - 29308854
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  29308798 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29308854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 29315758 - 29315814
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  29315758 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29315814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 313
Target Start/End: Original strand, 8509941 - 8510116
Alignment:
Q  139 attttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgaga-ccccgttaaacataagg 237  Q
    ||||| |||||||| |||||||||| |||  ||||||| ||||||  ||| ||||||||||| |||  |||||||| ||||| |||| ||||| || |||    
T  8509941 attttattttgttttaaaataataaagtctatagaataattagtctatttgatggaacattatgtacgacttaattatgagacccccattaaatatgagg 8510040  T
Q  238 aaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtg 313  Q
    |   |||| |||||||||  ||||| ||||||||||   || ||||||| ||||||| |||| |||||||||||||    
T  8510041 atgatattattaaagtatatgtagttaagctttattatgaaatgagatagcattaaaacataaagactattatgtg 8510116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 17684768 - 17684712
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||    
T  17684768 tgttggaataagccctaatagccaatctatgttgaatgggtttggctttgtatcatg 17684712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 143 - 314
Target Start/End: Original strand, 27925772 - 27925948
Alignment:
Q  143 tgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacat---taagtata--acttaattgtgagaccccgttaaacataagg 237  Q
    ||||||||||||||||||||| |||| |||||||  ||||  |||||| |||||||   ||||| |   ||||||| ||||||| || ||||||  |||     
T  27925772 tgttttgtttcaaaataataaagtccttagaataactagtatgtttaacggaacataattaagtgtgtgacttaatcgtgagactccattaaactaaaga 27925871  T
Q  238 aaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgg 314  Q
    |||||||||||||||||||  ||||||| |||||||   |||||  ||| |||| ||||| | ||||||||||||||    
T  27925872 aaattattcttaaagtatctctagtcaaactttatttggaagtggtatagcattgaagcacaaagactattatgtgg 27925948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 11651630 - 11651684
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatca 80  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||    
T  11651630 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatca 11651684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 320
Target Start/End: Complemental strand, 17850663 - 17850502
Alignment:
Q  158 taataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaagtatcc 257  Q
    |||||| ||||||| ||||| ||||  ||||  |||||||||| |||  |||||||||||| | ||  ||||| | ||||| | |||||||||| |||||    
T  17850663 taataaagtccctataatagctagtttgtttgttggaacattatgtaagacttaattgtgatatccaattaaaaacaaggacactattcttaaattatcc 17850564  T
Q  258 gtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
     |||||||||||| |||  |||| | ||| |||| ||| |||||||||||||| |||||||||    
T  17850563 atagtcaagcttt-ttgtgaagtcaaataacattcaagtatatagactattatatgggtagac 17850502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 25537461 - 25537405
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| ||||||||||||||||||||||||||| || ||||||||||| ||||||    
T  25537461 tgttggattaagccctaatagccaatctatattgactgagtttggctttgtatcatg 25537405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 31258120 - 31258065
Alignment:
Q  127 atttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagt 182  Q
    |||||||||||| |||||||||||||||||||||||| ||| ||| |||| |||||    
T  31258120 atttctttattgcttttgttttgtttcaaaataataaagtctctaaaataattagt 31258065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 13359560 - 13359512
Alignment:
Q  34 taagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||| |||||||||||||||||||| |||||||||| ||||| ||||||    
T  13359560 taagtcctaatagccaatctatattcattgggtttgactttgtatcatg 13359512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 16566611 - 16566563
Alignment:
Q  34 taagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||| ||||||| ||||| ||||| ||||||    
T  16566611 taagccctaatagccaatctatgttgattgagtttgactttgtatcatg 16566563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 189282 - 189221
Alignment:
Q  24 aatgttggaataagccctaatagccaatcta---tattgattgggtttggctttgcatcatg 82  Q
    ||||||||| ||||||||||||  |||||||   ||||||||||||||||||||| ||||||    
T  189282 aatgttggagtaagccctaataatcaatctagtatattgattgggtttggctttgtatcatg 189221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 166; Significance: 8e-89; HSPs: 4)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 123 - 320
Target Start/End: Complemental strand, 2525 - 2328
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2525 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 2426  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  2425 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 2328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 123 - 320
Target Start/End: Complemental strand, 11416 - 11219
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11416 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 11317  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  11316 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 11219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 2620 - 2564
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2620 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 2564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 11511 - 11455
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11511 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 11455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 166; Significance: 8e-89; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 123 - 320
Target Start/End: Original strand, 5532 - 5729
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5532 aggcatttctttattgatttatttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 5631  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||    
T  5632 ccgttaaacataaggaaattattcttaaagtatatgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagac 5729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 5444 - 5492
Alignment:
Q  34 taagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  5444 taagccctaatagccaatctatattgtttgggtttggctttgtatcatg 5492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 166; Significance: 8e-89; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 123 - 320
Target Start/End: Complemental strand, 4426807 - 4426611
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4426807 aggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 4426708  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||    
T  4426707 ccgttaaacataagg-aactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagac 4426611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 123 - 320
Target Start/End: Original strand, 5707323 - 5707520
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5707323 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacc 5707422  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||    
T  5707423 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 5707520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 123 - 320
Target Start/End: Complemental strand, 19926964 - 19926767
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926964 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 19926865  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  19926864 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 19926767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 123 - 320
Target Start/End: Original strand, 5713951 - 5714148
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  5713951 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagcccatttaatggaacattaagtataacttaattgtgagacc 5714050  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||    
T  5714051 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 5714148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 123 - 320
Target Start/End: Original strand, 26970466 - 26970663
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970466 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 26970565  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || ||||||||||||||| |||||| |||||||||||||||||| |||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  26970566 ccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 26970663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 123 - 320
Target Start/End: Complemental strand, 28393338 - 28393141
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28393338 aggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 28393239  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || ||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||    
T  28393238 ccattaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagac 28393141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 123 - 320
Target Start/End: Original strand, 55612686 - 55612883
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612686 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 55612785  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || ||||||||||||||| || ||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  55612786 ccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 55612883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 126 - 320
Target Start/End: Original strand, 868603 - 868797
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 225  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  868603 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccccg 868702  T
Q  226 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    ||||||||||||||| |||||| |||||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  868703 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 868797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 132 - 318
Target Start/End: Original strand, 8845215 - 8845401
Alignment:
Q  132 tttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaac 231  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8845215 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8845314  T
Q  232 ataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtag 318  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||||||    
T  8845315 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtag 8845401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 132 - 318
Target Start/End: Original strand, 8858179 - 8858365
Alignment:
Q  132 tttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaac 231  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8858179 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8858278  T
Q  232 ataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtag 318  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||||||    
T  8858279 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtag 8858365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 123 - 320
Target Start/End: Original strand, 18262215 - 18262412
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262215 aggcatttctttattgattttgtttcgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 18262314  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||  ||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  18262315 ccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagac 18262412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 123 - 320
Target Start/End: Original strand, 26963643 - 26963840
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26963643 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaaatataacttaattgtgagacc 26963742  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || ||||||||||||||| |||||| |||||||||||||||||| |||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  26963743 ccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 26963840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 123 - 320
Target Start/End: Complemental strand, 10621537 - 10621340
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  10621537 aggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgagagc 10621438  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || ||||||||||||||| |||||| |||||||| |||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  10621437 ccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 10621340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 123 - 320
Target Start/End: Complemental strand, 10628616 - 10628419
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  10628616 aggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgagagc 10628517  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || ||||||||||||||| |||||| |||||||| |||||||||||||||||| ||||| ||||| ||||||||||| |||||||||||| |||||||    
T  10628516 ccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatattattaaagcatagagactattatgtaggtagac 10628419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 123 - 320
Target Start/End: Original strand, 18269071 - 18269273
Alignment:
Q  123 aggcatttctttattgatttt-----gttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtg 217  Q
    |||||||||||||||||||||     |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18269071 aggcatttctttattgattttgttttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtg 18269170  T
Q  218 agaccccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggta 317  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||||  ||| ||||| ||||||||||||||||| |||||||||||| ||||    
T  18269171 agaccccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggta 18269270  T
Q  318 gac 320  Q
    |||    
T  18269271 gac 18269273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 123 - 235
Target Start/End: Original strand, 12357139 - 12357251
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12357139 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 12357238  T
Q  223 ccgttaaacataa 235  Q
    || ||||||||||    
T  12357239 ccattaaacataa 12357251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 128 - 319
Target Start/End: Original strand, 20311299 - 20311491
Alignment:
Q  128 tttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaag-tataacttaattgtgagaccccgt 226  Q
    ||||||||||||||||||||||||| |||||||||| || | || |||||||| |  ||| |||||| ||||||| |||||||||||||||||||||| |    
T  20311299 tttctttattgattttgttttgttttaaaataataaagtacttataatagttaatatgttcaatggagcattaaggtataacttaattgtgagaccccat 20311398  T
Q  227 taaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtaga 319  Q
    |||||||||||| | | || |||||||||  || ||||||||||||||  ||||||||||||||||||||||| |||||||| ||||||||||    
T  20311399 taaacataaggacactgtttttaaagtatttgttgtcaagctttattgtgaagtgagatatcattaaagcatagagactattttgtgggtaga 20311491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 126 - 320
Target Start/End: Complemental strand, 10677753 - 10677562
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 225  Q
    ||||| |||||||||||| ||||||||||| | ||||| | ||||| |||| |||||| || ||||||| |||||||||| ||||||| | |||| |||     
T  10677753 catttttttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-ccca 10677655  T
Q  226 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    ||||||  || || |||||||||||||||||||||||||||||||| |||||  ||||||| |||||||| ||||||||||||||||||||||||    
T  10677654 ttaaacgaaatgatattattcttaaagtatccgtagtcaagctttagtgaaa--tgagataacattaaagtatatagactattatgtgggtagac 10677562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 126 - 320
Target Start/End: Complemental strand, 10891393 - 10891202
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 225  Q
    ||||| |||||||||||| ||||||||||| | ||||| | ||||| |||| |||||| || ||||||| |||||||||| ||||||| | |||| |||     
T  10891393 catttttttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-ccca 10891295  T
Q  226 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    ||||||  || || |||||||||||||||||||||||||||||||| |||||  ||||||| |||||||| ||||||||||||||||||||||||    
T  10891294 ttaaacgaaatgatattattcttaaagtatccgtagtcaagctttagtgaaa--tgagataacattaaagtatatagactattatgtgggtagac 10891202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 126 - 320
Target Start/End: Original strand, 35223576 - 35223760
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 225  Q
    ||||||||| ||||||||||||||||| |||||||||| |||||||||||| |||||| |||||||||| |||||||| | |||||||          ||    
T  35223576 catttctttgttgattttgttttgttttaaaataataaagtccctagaataattagtctgtttaatggagcattaagtgtgacttaat----------cg 35223665  T
Q  226 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    | ||||  ||||| |||||||||||||||| |||||||||||||||||| |||    |||| |||||||||||||||||||||||||||||||||    
T  35223666 taaaacgaaaggacattattcttaaagtattcgtagtcaagctttattgtaaaaaaggataacattaaagcatatagactattatgtgggtagac 35223760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 126 - 320
Target Start/End: Complemental strand, 5668327 - 5668132
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 225  Q
    ||||||||| |||||||||||||||||||||||||||| ||| |||||||| ||||||  ||||||||| |||||||| | | ||||| |||||| |||     
T  5668327 catttctttgttgattttgttttgtttcaaaataataaagtctctagaataattagtctatttaatggagcattaagtgtgatttaatcgtgaga-ccca 5668229  T
Q  226 ttaaacataaggaaattattcttaaag--tatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    |||||   ||||| |||||||||||||  |||  |||||||||||||||||  ||  |||||| ||||||| |||| |||||||||||||| |||||    
T  5668228 ttaaatgaaaggacattattcttaaagtatatttgtagtcaagctttattgtgaaaagagataacattaaatcatagagactattatgtggatagac 5668132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 265
Target Start/End: Original strand, 5616216 - 5616358
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||| ||||||||||||||||||||||||| || |||| |||| ||||||  |||  ||||||||||||| | ||| |||  ||||| |    
T  5616216 aggcatttctttattcattttgttttgtttcaaaataataaagttcctaaaataattagtctatttcttggaacattaagtctgactaaatcatgagatc 5616315  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaa 265  Q
    |||||||||   |||| |||||||||||||||||||| |||||    
T  5616316 ccgttaaactagaggacattattcttaaagtatccgttgtcaa 5616358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 19927060 - 19927003
Alignment:
Q  25 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19927060 atgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 19927003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 5713856 - 5713912
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5713856 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 5713912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 26963548 - 26963604
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26963548 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26963604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 26970371 - 26970427
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26970371 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26970427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 5707228 - 5707284
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  5707228 tgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 5707284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 10621632 - 10621576
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  10621632 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 10621576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 12357044 - 12357100
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  12357044 tgttggaataagccctaatagccaatctatattgattggatttggctttgtatcatg 12357100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 868507 - 868561
Alignment:
Q  28 ttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  868507 ttggaataaaccctaatagccaatctatattgattgggtttggctttgtatcatg 868561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 17142429 - 17142372
Alignment:
Q  25 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  17142429 atgttggaaaaagccctaatagccaatctatattgattgggtttgactttgtatcatg 17142372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 10628711 - 10628655
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||    
T  10628711 tgttggaataagccctaatagccaatctatattgattggttttgactttgtatcatg 10628655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 55612594 - 55612650
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  55612594 tgttagaataagccctaataaccaatctatattgattgggtttggctttgtatcatg 55612650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 4426905 - 4426847
Alignment:
Q  24 aatgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||| || ||||||    
T  4426905 aatgttggagtaagtcctaatagccaatctatattgattgggtttggctctgtatcatg 4426847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 319
Target Start/End: Complemental strand, 21454319 - 21454145
Alignment:
Q  146 tttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacatt-aagtataacttaattgtgagaccccgttaaacataaggaaattat 244  Q
    ||||||||||| |||||| || | |||||||||||||  | ||||||||||||| || | | |||||||  ||||||||| ||||  |||| || |||||    
T  21454319 tttgtttcaaagtaataaagttcttagaatagttagtttgattaatggaacattaaaatgtgacttaatattgagaccccattaattataatgacattat 21454220  T
Q  245 tcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtaga 319  Q
    | ||||| ||||  ||||||| ||||||||  || ||||||| || ||| ||||| ||| ||||||||| |||||    
T  21454219 ttttaaaatatctatagtcaaactttattgtgaaatgagataacaataatgcataaagattattatgtgagtaga 21454145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 28393434 - 28393380
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatca 80  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||    
T  28393434 tgttggagtaagccctaatagccaatctatattgattgggtttgactttgtatca 28393380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 18268976 - 18269032
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||||| ||||||    
T  18268976 tgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 18269032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 236
Target Start/End: Complemental strand, 39074346 - 39074278
Alignment:
Q  169 ctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccgttaaacataag 236  Q
    |||||||| ||||||||||||| | ||||||||||||| |||||||  ||||||||| |||||||||||    
T  39074346 ctagaataattagtccgtttaaattgaacattaagtatgacttaatcatgagaccccattaaacataag 39074278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 55992680 - 55992729
Alignment:
Q  33 ataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||| | ||||||||||||||| ||||| ||||||    
T  55992680 ataagccctaatagccaatttgtattgattgggtttgactttgtatcatg 55992729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 316
Target Start/End: Complemental strand, 39074270 - 39074211
Alignment:
Q  257 cgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggt 316  Q
    ||||||||  ||||||||  ||||||||||||||||||||||  ||||||||| ||||||    
T  39074270 cgtagtcatactttattgtgaagtgagatatcattaaagcatggagactattacgtgggt 39074211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 5668412 - 5668371
Alignment:
Q  41 taatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||| |||||| |||| ||||||    
T  5668412 taatagccaatctatattgattgtgtttggttttgtatcatg 5668371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 8845118 - 8845166
Alignment:
Q  34 taagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||| ||||||||||||||||| ||||||| ||||| ||||| ||||||    
T  8845118 taagtcctaatagccaatctatgttgattgagtttgactttgtatcatg 8845166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 8858082 - 8858130
Alignment:
Q  34 taagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||| ||||||||||||||||| ||||||| ||||| ||||| ||||||    
T  8858082 taagtcctaatagccaatctatgttgattgagtttgactttgtatcatg 8858130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 18262136 - 18262176
Alignment:
Q  42 aatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||| |||| |||||||||||||| ||||||    
T  18262136 aatagccaatctatgttgaatgggtttggctttgtatcatg 18262176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 166; Significance: 8e-89; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 123 - 320
Target Start/End: Original strand, 13211305 - 13211502
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13211305 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 13211404  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || ||||||||||||||| |||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||| |||||||    
T  13211405 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagac 13211502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 123 - 320
Target Start/End: Original strand, 18522666 - 18522863
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18522666 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 18522765  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| |||||||||||| |||||||    
T  18522766 ccattaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcatttaagcatagagactattatgtaggtagac 18522863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 126 - 320
Target Start/End: Complemental strand, 17781319 - 17781125
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 225  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  17781319 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 17781220  T
Q  226 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  17781219 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 17781125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 123 - 320
Target Start/End: Original strand, 6110067 - 6110264
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110067 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 6110166  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || ||||||||||||||| |||||| |||||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  6110167 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 6110264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 123 - 320
Target Start/End: Complemental strand, 10572796 - 10572599
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572796 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 10572697  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || ||||||||||||||| |||||| |||||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  10572696 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 10572599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 123 - 320
Target Start/End: Complemental strand, 16482687 - 16482490
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482687 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 16482588  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || ||||||||||||||| || ||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  16482587 ccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 16482490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 123 - 320
Target Start/End: Original strand, 18519981 - 18520175
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18519981 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 18520080  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    |||||||||||||||||| |||||||||   |||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  18520081 ccgttaaacataaggaaactattcttaa---atccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 18520175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 126 - 320
Target Start/End: Complemental strand, 10579556 - 10579362
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 225  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||     
T  10579556 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgttaaatggaacattaagtataacttaattgtgagacccca 10579457  T
Q  226 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    ||||||||||||||| |||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||| |||||||    
T  10579456 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagac 10579362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 126 - 320
Target Start/End: Complemental strand, 15601085 - 15600891
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 225  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  15601085 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 15600986  T
Q  226 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    ||||||||||||||| |||||| |||||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  15600985 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 15600891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 126 - 320
Target Start/End: Complemental strand, 15607630 - 15607436
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 225  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  15607630 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 15607531  T
Q  226 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    ||||||||||||||| |||||| |||||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  15607530 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 15607436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 123 - 320
Target Start/End: Complemental strand, 17200388 - 17200191
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  17200388 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgatacc 17200289  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || |||||||||| |||| ||||||||||||||||||||| |||||||||||| | ||| ||||||||||||||||| ||||||||||||||||||||    
T  17200288 cctttaaacataatgaaactattcttaaagtatccgtagttaagctttattgagatgtgtgatatcattaaagcatagagactattatgtgggtagac 17200191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 126 - 320
Target Start/End: Complemental strand, 19089946 - 19089752
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 225  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19089946 catttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgagacccct 19089847  T
Q  226 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||| |||||||||||| |||||||    
T  19089846 ttaaacataatgaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaatcatagagactattatgtaggtagac 19089752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 123 - 320
Target Start/End: Original strand, 13248610 - 13248807
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13248610 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 13248709  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || ||||||||||||||| |||||| ||||||| |||||||||||||| |||| ||||| |||| |||||||||||| |||||||||||| |||||||    
T  13248710 ccattaaacataaggaaactattctcaaagtattcgtagtcaagctttgttgagaagtgggataacattaaagcatagagactattatgtaggtagac 13248807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 123 - 320
Target Start/End: Original strand, 13516814 - 13517011
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  13516814 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttcatggaacattaagtataacttaattgtgagacc 13516913  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    ||||||||||||||||||  |||||||||||||| |||||||||||||||||| ||||  ||||||||||||||| | ||||||||||||||||||||    
T  13516914 ccgttaaacataaggaaacgattcttaaagtatctgtagtcaagctttattgagaagtaggatatcattaaagcacagagactattatgtgggtagac 13517011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 126 - 320
Target Start/End: Complemental strand, 15357787 - 15357593
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 225  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  15357787 catttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 15357688  T
Q  226 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    ||||||||||||||  |||||| ||||||||||||||||||||||||||| ||||| |||||||||||| |||| |||||||||||| |||||||    
T  15357687 ttaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtagac 15357593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 126 - 320
Target Start/End: Complemental strand, 32057101 - 32056907
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 225  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||| ||||| ||||||||    
T  32057101 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacatcaagtataactttattgtaagaccccg 32057002  T
Q  226 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    |||||||||| |||| |||||||||||| ||||||||||| ||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||    
T  32057001 ttaaacataaagaaactattcttaaagtgtccgtagtcaaactttattgagaagtgggatatcattaaagcatagagactattatgtgggtagac 32056907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 123 - 306
Target Start/End: Original strand, 8490491 - 8490674
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8490491 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 8490590  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagacta 306  Q
    || ||||||||||||||| |||||| |||||||| ||||||||||||| |||| ||||| ||||||||||||||||| ||||||    
T  8490591 ccattaaacataaggaaactattctcaaagtatctgtagtcaagctttgttgagaagtgggatatcattaaagcatagagacta 8490674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 123 - 281
Target Start/End: Complemental strand, 18640950 - 18640792
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18640950 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacc 18640851  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtg 281  Q
    || ||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||    
T  18640850 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtg 18640792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 126 - 320
Target Start/End: Complemental strand, 1647726 - 1647528
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataa----cttaattgtgagac 221  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    ||||||||||||||    
T  1647726 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataattaacttaattgtgagac 1647627  T
Q  222 cccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    ||||||||||||||||||| |||| |||||||||||||| |||||||||||||| ||  | ||||| ||||||||||| |||||||||||||| |||||    
T  1647626 cccgttaaacataaggaaactatttttaaagtatccgtaatcaagctttattgagaaaagggatataattaaagcatagagactattatgtggatagac 1647528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 139 - 320
Target Start/End: Complemental strand, 15342407 - 15342226
Alignment:
Q  139 attttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataagga 238  Q
    ||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15342407 attttgttttgtttcaaaataataaagtccctagaatagtttgttcgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 15342308  T
Q  239 aattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    |  |||||| ||||||||||||||||||||||||||| ||||| |||||||||||| |||| |||||||||||| |||||||    
T  15342307 acctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtagac 15342226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 126 - 319
Target Start/End: Original strand, 29924977 - 29925170
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 225  Q
    |||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||  ||||||||||| ||||||||||||||||     
T  29924977 catttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgagacccca 29925076  T
Q  226 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtaga 319  Q
    ||||| ||||||| |||||||||||| |||  |||||||||||||||||  ||||||||||||||||||||||  || ||||||||||| ||||    
T  29925077 ttaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgtggataga 29925170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 126 - 319
Target Start/End: Original strand, 29974130 - 29974323
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 225  Q
    |||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||  ||||||||||| ||||||||||||||||     
T  29974130 catttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgagacccca 29974229  T
Q  226 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtaga 319  Q
    ||||| ||||||| |||||||||||| |||  |||||||||||||||||  ||||||||||||||||||||||  || ||||||||||| ||||    
T  29974230 ttaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgtggataga 29974323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 123 - 308
Target Start/End: Original strand, 16200129 - 16200313
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    |||||||||||  ||| |||| ||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  16200129 aggcatttcttcgttg-ttttattttgtttcaaaataataaagtccttagaatagttagttcgtttaatggaacattatgtataacttaattgtgagacc 16200227  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactatt 308  Q
    || ||||||||||||| |||||||||||||||| |||||||||| |||||||  ||||| ||||||||||||||||  ||||||||    
T  16200228 ccattaaacataaggacattattcttaaagtattcgtagtcaagatttattgtgaagtgggatatcattaaagcatggagactatt 16200313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 123 - 308
Target Start/End: Original strand, 16200435 - 16200619
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    |||||||||||  ||| |||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  16200435 aggcatttcttcgttg-ttttattttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattatgtataacttaattgtgagact 16200533  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactatt 308  Q
    ||  |||||||||||| |||||||||||||||| |||||||||| |||||||  ||||| ||| ||||||||||||  ||||||||    
T  16200534 ccaataaacataaggacattattcttaaagtattcgtagtcaagatttattgtgaagtgggatgtcattaaagcatgaagactatt 16200619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 127 - 320
Target Start/End: Complemental strand, 24253589 - 24253395
Alignment:
Q  127 atttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgaga-ccccg 225  Q
    ||||||||||||||||||||||  ||||||||||||| |||| |||||||| | || ||||| |||||||||||||||| ||||||| |||||| ||||     
T  24253589 atttctttattgattttgttttacttcaaaataataaagtccttagaatagctcgttcgtttgatggaacattaagtatgacttaatcgtgagatcccca 24253490  T
Q  226 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    | ||||||||||| | ||||||||||||||  || |||||  ||||||| |||||||| || |||||||||||| |||||||||||| |||||||    
T  24253489 tcaaacataaggacactattcttaaagtatatgtggtcaaaatttattgtaaagtgaggtaacattaaagcatagagactattatgtcggtagac 24253395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 226 - 320
Target Start/End: Original strand, 17136465 - 17136559
Alignment:
Q  226 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||| ||||||||||||||||||||    
T  17136465 ttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtgggtagac 17136559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 18534759 - 18534820
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtcc 184  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  18534759 aggcatttctttattgattttgttttgtttcaaaataataaagtccatagaatagttagtcc 18534820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 6109972 - 6110028
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  6109972 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 6110028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 8490396 - 8490452
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8490396 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 8490452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 13248515 - 13248571
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13248515 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 13248571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 13211211 - 13211267
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  13211211 tgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 13211267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 18641045 - 18640989
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  18641045 tgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 18640989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 10579653 - 10579604
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 75  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10579653 tgttggaataagccctaatagccaatctatattgattgggtttgactttg 10579604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 17136137 - 17136193
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  17136137 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 17136193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 10572890 - 10572841
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 75  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  10572890 tgttggaataagccctaatagccaacctatattgattgggtttgactttg 10572841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 15607729 - 15607672
Alignment:
Q  26 tgttggaataagccctaatagccaatctata-ttgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||    
T  15607729 tgttggaataagccctaatagccaatctatattttattgggtttggctttgtatcatg 15607672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 17200483 - 17200434
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 75  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  17200483 tgttggagtaagccctaatagccaatctatgttgattgggtttggctttg 17200434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 15351293 - 15351237
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||| ||||||  |||||||||| ||||||    
T  15351293 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15351237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 15357885 - 15357829
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||| ||||||  |||||||||| ||||||    
T  15357885 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15357829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 16482782 - 16482727
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  16482782 tgttagaataagccctaata-ccaatctatattgattgggtttggctttgtatcatg 16482727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 18510925 - 18510965
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataa 163  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  18510925 aggcatttctttattgattttgttttgtttcaaaataataa 18510965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 18519885 - 18519941
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||| |||||||||||||||||||||||||||||||| |||| ||||||    
T  18519885 tgttggagtaagtcctaatagccaatctatattgattgggtttggttttgtatcatg 18519941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 1647825 - 1647768
Alignment:
Q  25 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||| ||||||||||||||   ||||||||||||||||||||||||| ||||||    
T  1647825 atgttggagtaagccctaatagctggtctatattgattgggtttggctttgtatcatg 1647768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 15601184 - 15601127
Alignment:
Q  26 tgttggaataagccctaatagccaatctata-ttgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||| || ||||||||||| |||| ||||||    
T  15601184 tgttggaataagccctaatagccaatctatattttattgggtttggatttgtatcatg 15601127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 13516719 - 13516775
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||||| || ||||||    
T  13516719 tgttggagtaagccctaatagccaatctatgttgattgagtttggctgtgtatcatg 13516775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 17781414 - 17781370
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttgg 70  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||    
T  17781414 tgttggagtaagccctaatagccaatctatattgattgagtttgg 17781370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 19090041 - 19089997
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttgg 70  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||    
T  19090041 tgttggagtaagccctaatagccaatctatattgattgagtttgg 19089997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 32057200 - 32057144
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| ||||| |||||||||||||||| ||||||||||||| ||||| ||||||    
T  32057200 tgttggagtaagctctaatagccaatctatgttgattgggtttgactttgtatcatg 32057144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 18510829 - 18510885
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||  |||| ||||||    
T  18510829 tgttggagtaagccctaatatccaatctatattgattgagtttgattttgtatcatg 18510885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 18522570 - 18522626
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||  |||| ||||||    
T  18522570 tgttggagtaagccctaatatccaatctatattgattgagtttgattttgtatcatg 18522626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 18534671 - 18534719
Alignment:
Q  34 taagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||| |||||||||||||||| |||||| |||| ||||||    
T  18534671 taagccctaatagtcaatctatattgattgagtttggttttgtatcatg 18534719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 29924879 - 29924935
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| ||||||||||||| | |||||||||||||| ||||| | ||| ||||||    
T  29924879 tgttggagtaagccctaatagtcgatctatattgattgagtttgacattgtatcatg 29924935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 29974032 - 29974088
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| ||||||||||||| | |||||||||||||| ||||| | ||| ||||||    
T  29974032 tgttggagtaagccctaatagtcgatctatattgattgagtttgacattgtatcatg 29974088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 166; Significance: 8e-89; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 123 - 320
Target Start/End: Original strand, 18252033 - 18252230
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252033 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 18252132  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  18252133 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 18252230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 123 - 320
Target Start/End: Complemental strand, 21171437 - 21171240
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  21171437 aggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttcatggaacattaaatataacttaattgtgagacc 21171338  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||    
T  21171337 ccgttgaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagac 21171240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 123 - 320
Target Start/End: Complemental strand, 27131613 - 27131416
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27131613 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 27131514  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || ||||||||||||||| |||||| |||||||  |||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  27131513 ccattaaacataaggaaactattctcaaagtatttgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtagac 27131416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 123 - 320
Target Start/End: Complemental strand, 27310781 - 27310584
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27310781 aggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 27310682  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
     |||| |||||||||||| ||||||||||||||| |||||||||||||||||| |||||  |||||||||||||||| ||||||||||||||||||||    
T  27310681 acgttgaacataaggaaactattcttaaagtatcagtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtgggtagac 27310584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 123 - 320
Target Start/End: Complemental strand, 16359239 - 16359042
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  16359239 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagaataacttaattgtgagacc 16359140  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    |||||||||||||||||| ||||||||||||| || ||||||||||||||||| || ||  |||||||||||||||| ||||||||||||||||||||    
T  16359139 ccgttaaacataaggaaactattcttaaagtaaccctagtcaagctttattgagaaatggaatatcattaaagcatagagactattatgtgggtagac 16359042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 123 - 312
Target Start/End: Complemental strand, 18532718 - 18532529
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  18532718 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagttcgtttaatggaacattaagtataacttaattgtgagacc 18532619  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgt 312  Q
    || ||||||||||||||| |||||| |||||||||||||||||||||| |||| ||||| ||||||||||||||||| ||||||||||||    
T  18532618 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgt 18532529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 126 - 320
Target Start/End: Complemental strand, 36816834 - 36816640
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 225  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||| |||    
T  36816834 catttctttattgattttgttttgtttcaaaataatgaagtccctagaatagttcgtctgtttaatggaacattaagtataaattaattgtgagactccg 36816735  T
Q  226 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||| |||| |||||||||||| |||||||||||||| |||||    
T  36816734 ttaaacataaggacattattcttaaagtatccatagtcaagctttattgagaagtgggataccattaaagcatagagactattatgtggatagac 36816640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 123 - 320
Target Start/End: Complemental strand, 3856123 - 3855926
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    |||||||||||| || |||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3856123 aggcatttctttgtttattttgttttgtttcaaaataacaaagtccctagaatagttagcccgtttaatggaacattaagtataacttaattgtgagacc 3856024  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || ||||||||||||| |||||||||||| |||  |||||||| ||||||||  ||||| ||||| ||||||||||  ||||||||| ||||||||||    
T  3856023 ccattaaacataaggacattattcttaaaatatttgtagtcaaactttattgtgaagtgggatattattaaagcatggagactattacgtgggtagac 3855926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 126 - 320
Target Start/End: Complemental strand, 22657423 - 22657228
Alignment:
Q  126 catttctttattgatttt-gttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccc 224  Q
    |||||||||||||||||| |||||||||||||||||||| || |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  22657423 catttctttattgatttttgttttgtttcaaaataataaagttcctagaatagttagtctgtttaatggaacattaaatataacttaattgtgagacccc 22657324  T
Q  225 gttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
     ||||||||||||| |  ||||||||||| ||  |||||||||||||||   || |||||||||||||||||||| ||||||| |||||| |||||    
T  22657323 tttaaacataaggacacaattcttaaagtgtctctagtcaagctttattctgaaatgagatatcattaaagcatagagactatcatgtggatagac 22657228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 126 - 320
Target Start/End: Complemental strand, 27277756 - 27277564
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 225  Q
    ||||||||| ||| |||||||||||||||||||||||| |||||||||||| ||||||| ||||| ||| ||||| || | ||||||| | ||||||       
T  27277756 catttctttgttgtttttgttttgtttcaaaataataacgtccctagaataattagtccatttaacggagcatta-gtgtgacttaatcgcgagacctt- 27277659  T
Q  226 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    |||| |  || || ||||||||||||||||||||||||| |||||||||  ||  | |||| |||||||||||| ||||||||||||||||||||    
T  27277658 ttaaccgaaatgacattattcttaaagtatccgtagtcaggctttattgtgaaaagggataacattaaagcatagagactattatgtgggtagac 27277564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 154 - 319
Target Start/End: Complemental strand, 12014457 - 12014292
Alignment:
Q  154 aaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaagt 253  Q
    |||||||||| ||| ||||||||  ||||||||||||||||| ||||||| ||| ||||| || ||| ||| |||||||||| ||  |||||||||||      
T  12014457 aaaataataaagtcactagaatacatagtccgtttaatggaatattaagtgtaaattaatcgttagatcccattaaacataatgatgttattcttaaaac 12014358  T
Q  254 atccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtaga 319  Q
    ||||||||| |||||||| ||  ||| | ||||  |||||||| || |||| ||||||||||||||    
T  12014357 atccgtagttaagctttagtgtgaagagggatacgattaaagcgtaaagaccattatgtgggtaga 12014292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 154 - 267
Target Start/End: Complemental strand, 12006712 - 12006599
Alignment:
Q  154 aaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaagt 253  Q
    |||||||||| |||||||||||||||||||  |||||||||| ||||||| |  |||||| |||||||||| | ||||||||||| |||||| |||||      
T  12006712 aaaataataaagtccctagaatagttagtctatttaatggaatattaagtgtgccttaatcgtgagaccccatgaaacataaggacattattattaaaac 12006613  T
Q  254 atccgtagtcaagc 267  Q
    || |||||||||||    
T  12006612 attcgtagtcaagc 12006599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 18251935 - 18251992
Alignment:
Q  25 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18251935 atgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18251992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 18532814 - 18532757
Alignment:
Q  25 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18532814 atgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18532757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 27310877 - 27310821
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  27310877 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 27310821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 132 - 318
Target Start/End: Complemental strand, 9918106 - 9917927
Alignment:
Q  132 tttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaac 231  Q
    |||||||||||||||||||| ||||||||||| ||| ||       |||||  ||||||| |||||||||||||||||| ||   |||| ||  |||||     
T  9918106 tttattgattttgttttgttacaaaataataaagtcactt------ttagtttgtttaatcgaacattaagtataacttgatcacgagatcca-ttaaat 9918014  T
Q  232 ataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtag 318  Q
    ||||||| |||||||||||| ||||  |||| |||||||||||  ||||| |||| |||| ||||||| ||| || ||||| |||||    
T  9918013 ataaggacattattcttaaaatatctatagttaagctttattgttaagtgggatagcattgaagcatagagaatactatgtcggtag 9917927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 16359336 - 16359280
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||||||||||||||||||||||| || |||| ||||||    
T  16359336 tgttggagtaagccctaatagccaatctatattgattgggttaggatttgtatcatg 16359280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 21171535 - 21171479
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| ||||| |||||||||||||||||| ||||| ||||||||||| ||||||    
T  21171535 tgttggagtaagctctaatagccaatctatatggattgagtttggctttgtatcatg 21171479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 22657521 - 22657472
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 75  Q
    ||||||| |||||| ||||||||||| ||||||||||| |||||||||||    
T  22657521 tgttggagtaagccttaatagccaatatatattgattgagtttggctttg 22657472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 195
Target Start/End: Complemental strand, 30720694 - 30720625
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaa 195  Q
    ||||| ||||||| |||| |||||||| |||||||||| || ||| ||||| ||||| ||||||||||||    
T  30720694 catttttttattggttttattttgttttaaaataataaagttcctggaataattagttcgtttaatggaa 30720625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 75
Target Start/End: Complemental strand, 36816926 - 36816885
Alignment:
Q  34 taagccctaatagccaatctatattgattgggtttggctttg 75  Q
    ||||||||||||  ||||||||||||||||||||||||||||    
T  36816926 taagccctaatattcaatctatattgattgggtttggctttg 36816885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 3856220 - 3856164
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| || |||||||||||||||| || ||||||||||||| ||||| ||||||    
T  3856220 tgttggagtaggccctaatagccaatccatcttgattgggtttgactttgtatcatg 3856164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 27131704 - 27131652
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||     ||||||||||||||| ||||||    
T  27131704 tgttggaataagccctaatagccaatctat----gttgggtttggctttgtatcatg 27131652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 3403248 - 3403320
Alignment:
Q  150 tttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||| |||||| |||  || ||||||||||| | ||||||||| ||||||| | |||||| |||||||||    
T  3403248 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagacc 3403320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 222
Target Start/End: Complemental strand, 3443571 - 3443499
Alignment:
Q  150 tttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||| |||||| |||  || ||||||||||| | ||||||||| ||||||| | |||||| |||||||||    
T  3443571 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagacc 3443499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 27277856 - 27277800
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||||||||||| || |||  ||||| ||||| ||||||    
T  27277856 tgttggagtaagccctaatagccaatctatgttaattatgtttgactttgtatcatg 27277800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 163; Significance: 5e-87; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 126 - 320
Target Start/End: Original strand, 24642655 - 24642849
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 225  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24642655 catttctttattgattttgttttgtttcaaaatcataaagtccctagaattgttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 24642754  T
Q  226 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||    
T  24642755 ttaaacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgagatatcattaaagtatagagactattatgtgggtagac 24642849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 126 - 319
Target Start/End: Original strand, 6094129 - 6094322
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 225  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6094129 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 6094228  T
Q  226 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtaga 319  Q
    ||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||| ||||||||||||||||| |||||||||| ||||||||    
T  6094229 ttaaacataaggaaactatttttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatatgggtaga 6094322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 125 - 320
Target Start/End: Original strand, 21940670 - 21940865
Alignment:
Q  125 gcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccc 224  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21940670 gcatttctttattgattttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccc 21940769  T
Q  225 gttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
     ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  21940770 attaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 21940865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 123 - 320
Target Start/End: Original strand, 28554886 - 28555083
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||| |||||||||||||||  | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28554886 aggcatttctttattgattttgtttagtttcaaaataataaaatacctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 28554985  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || |||||||||| |||| |||||| |||||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  28554986 ccattaaacataatgaaactattctaaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 28555083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 123 - 320
Target Start/End: Original strand, 22171492 - 22171687
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22171492 aggcatttccttattgattttgttttatttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 22171591  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || |||||||||  |||| |||||| ||||||||||||||||||||||||||| |||||  |||||||||||||||| |||||||||||| |||||||    
T  22171592 ccattaaacata--gaaactattctcaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtaggtagac 22171687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 126 - 253
Target Start/End: Original strand, 24636860 - 24636987
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 225  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24636860 catttctttcttgattttgttttgtttcaaaataataaagtccctagaatagttagtccttttaatggaacattaagtataacttaattgtgagaccccg 24636959  T
Q  226 ttaaacataaggaaattattcttaaagt 253  Q
    ||||||||||||||| ||||||||||||    
T  24636960 ttaaacataaggaaactattcttaaagt 24636987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 132 - 320
Target Start/End: Complemental strand, 38232570 - 38232384
Alignment:
Q  132 tttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaac 231  Q
    ||||||||||||||||| ||||||||||||||  || ||||||||||||||| |||||||  |   ||| ||||||||||||  ||| || || ||||||    
T  38232570 tttattgattttgttttatttcaaaataataaa-tctctagaatagttagtctgtttaataaatttttaggtataacttaatcatgacactccattaaac 38232472  T
Q  232 ataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
     |||  | | ||||||||||||||  |||||||| |||||||| |||||||||||   |||||||||| | |||||| |||||||||||    
T  38232471 gtaaa-atagtattcttaaagtatttgtagtcaaactttattgtaaagtgagatagtcttaaagcataaaaactattttgtgggtagac 38232384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 22070107 - 22070164
Alignment:
Q  25 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  22070107 atgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 22070164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 21940573 - 21940629
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  21940573 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 21940629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 141 - 319
Target Start/End: Original strand, 2375027 - 2375203
Alignment:
Q  141 tttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaa 240  Q
    |||||||||||||||||||||||  |||||| |||| ||||||  |||||||||||||| |  || |||||||  ||| | ||| ||||||||| | | |    
T  2375027 tttgttttgtttcaaaataataaactccctataataattagtcaatttaatggaacatttatgatgacttaatcatga-aacccattaaacatacgaata 2375125  T
Q  241 ttattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtaga 319  Q
    ||||| |||||||||  ||||||| | |||||||   ||||||||| |||||||| ||||  ||||||| |||||||||    
T  2375126 ttatttttaaagtatatgtagtcacgatttattg-cgagtgagataacattaaagtatatgaactattaagtgggtaga 2375203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 24642556 - 24642605
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 75  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24642556 tgttggagtaagccctaatagccaatctatattgattgggtttggctttg 24642605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 6094031 - 6094087
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  6094031 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 6094087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 22171396 - 22171452
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||    
T  22171396 tgttggaataagccctaatagccaatctatattgattgggtttgattttgtatcatg 22171452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 28554791 - 28554847
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  28554791 tgttggagtaagccctaatagccaatctttgttgattgggtttggctttgtatcatg 28554847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 10920244 - 10920297
Alignment:
Q  168 cctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 221  Q
    ||||||||| |||||| ||||||||||||||||||||| | ||||| |||||||    
T  10920244 cctagaataattagtctgtttaatggaacattaagtatgagttaatcgtgagac 10920297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 272
Target Start/End: Complemental strand, 30200318 - 30200270
Alignment:
Q  224 cgttaaacataaggaaattattcttaaagtatccgtagtcaagctttat 272  Q
    ||||||| ||||||| |||||||||||||||| ||||||||| ||||||    
T  30200318 cgttaaaaataaggatattattcttaaagtatacgtagtcaacctttat 30200270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 32873019 - 32872948
Alignment:
Q  150 tttcaaaataataaggtccctagaatagttagtccgttta-atggaacattaagtataacttaattgtgaga 220  Q
    |||||||||||||| |||| || |||||||  ||| |||| || ||||||||||||| ||||||||||||||    
T  32873019 tttcaaaataataaagtccttataatagttcatccatttatatagaacattaagtatgacttaattgtgaga 32872948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 24636605 - 24636642
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattg 63  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  24636605 tgttggagtaagccataatagccaatctatattgattg 24636642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 162; Significance: 2e-86; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 123 - 320
Target Start/End: Original strand, 15152446 - 15152643
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15152446 aggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 15152545  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  15152546 ccgttaaacatacggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 15152643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 123 - 320
Target Start/End: Original strand, 29327787 - 29327984
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29327787 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgagacc 29327886  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  29327887 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 29327984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 123 - 320
Target Start/End: Complemental strand, 11536266 - 11536069
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11536266 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtacaacttaattgtgagacc 11536167  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || ||||||||||||||  |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  11536166 ccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 11536069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 123 - 320
Target Start/End: Original strand, 18561010 - 18561207
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  18561010 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaactgtgagacc 18561109  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    ||||||||||| |||||| ||||||||||||||| |||||||||||||||||| | ||| ||||||||||||||||| ||||||||||||||||||||    
T  18561110 ccgttaaacattaggaaactattcttaaagtatctgtagtcaagctttattgagaggtgggatatcattaaagcatagagactattatgtgggtagac 18561207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 125 - 320
Target Start/End: Complemental strand, 11543182 - 11542987
Alignment:
Q  125 gcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccc 224  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11543182 gcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtcagacccc 11543083  T
Q  225 gttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
     ||||||||||||||  |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  11543082 attaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 11542987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 123 - 320
Target Start/End: Original strand, 12750829 - 12751026
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  12750829 aggcatttctttattgattttgttttgtttcaaagtaataaagtccctagaatagttagtccgtttaatgaaacattaagtataacttaattgtgagacc 12750928  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
     |||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| |||||||||||||| |||||    
T  12750929 tcgttaaacataaagaaactattcttaaagtatccgtagtcaagctttattgagaagttggatatcattaaagcatagagactattatgtggatagac 12751026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 123 - 320
Target Start/End: Original strand, 15148145 - 15148342
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  15148145 aggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttgattgaacattaagtataacttaattgtgagacc 15148244  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  15148245 ccgttaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 15148342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 126 - 320
Target Start/End: Original strand, 12738542 - 12738736
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 225  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||  |||||||| |||||||| ||||||||||||||||||||  |    
T  12738542 catttctttattgattttattttgtttcaaaataataaagtccctagaatagttagtttgtttaatgaaacattaattataacttaattgtgagaccttg 12738641  T
Q  226 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||    
T  12738642 ttaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagac 12738736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 123 - 319
Target Start/End: Complemental strand, 18258046 - 18257850
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||    
T  18258046 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtctgtttaatggaacattaagtatgacttaattgtgagacc 18257947  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtaga 319  Q
    || ||||||| ||||| ||||||||||||||||||||||||||| ||| |||  ||||  |||| || ||| ||||| |||||||||||||| ||||    
T  18257946 ccattaaacacaaggacattattcttaaagtatccgtagtcaagtttttttgttaagtaggataacaataatgcataaagactattatgtggataga 18257850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 308
Target Start/End: Original strand, 13392157 - 13392338
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 225  Q
    ||||||||| |||| ||||||||||||||||||||||| || ||||||| | |||||| | |||||||| |||||||| | ||||||| |||||| |||     
T  13392157 catttctttgttgactttgttttgtttcaaaataataaagttcctagaacaattagtctgcttaatggagcattaagtgtgacttaatcgtgaga-ccca 13392255  T
Q  226 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactatt 308  Q
    |||||   ||||| |||||||||||||||||  ||||||| ||||||||  ||  | |||| ||||||| |||| ||||||||    
T  13392256 ttaaatgaaaggacattattcttaaagtatcaatagtcaaactttattgtgaaaagggataacattaaaacatagagactatt 13392338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 142 - 316
Target Start/End: Original strand, 2364917 - 2365090
Alignment:
Q  142 ttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaat 241  Q
    ||||| |||||||||||||||| ||| |||||||| ||||||  | |||||||||||||||| |  |||||| |||||| ||| ||||||  || || ||    
T  2364917 ttgttatgtttcaaaataataaagtctctagaataattagtctttctaatggaacattaagtgtggcttaatcgtgagaacccattaaactaaatgacat 2365016  T
Q  242 tattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggt 316  Q
    |||||||||| ||| ||||||||| | ||||||  || ||||||| ||||||| |||| ||||||| ||||||||    
T  2365017 tattcttaaaatattcgtagtcaa-ccttattgtgaaatgagataacattaaaacatagagactatcatgtgggt 2365090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 2653332 - 2653275
Alignment:
Q  25 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  2653332 atgttggaataagccctaatagccaatctatattgattgggattggctttgtatcatg 2653275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 313
Target Start/End: Original strand, 7396221 - 7396382
Alignment:
Q  153 caaaataataaggtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaa 251  Q
    |||||||| || ||| |||||||||||||| | ||||| ||||||||||||||| |||||||  ||||||||  ||||||||||| ||||||||||||||    
T  7396221 caaaataaaaatgtcgctagaatagttagttcatttaaatggaacattaagtatgacttaatcttgagaccctattaaacataagaaaattattcttaaa 7396320  T
Q  252 gtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtg 313  Q
      ||  |||||||||| ||| ||  || |  |||   ||||||||||| |||||||||||||    
T  7396321 acatatgtagtcaagccttagtgtgaaatacgatgatattaaagcatagagactattatgtg 7396382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 12738442 - 12738499
Alignment:
Q  25 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12738442 atgttggagtaagccctaatagccaatctatattgattgggtttggctttgtatcatg 12738499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 11543279 - 11543223
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  11543279 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 11543223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 126 - 213
Target Start/End: Original strand, 39111819 - 39111905
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaat 213  Q
    |||||||||||| |||||||||| |||||||| ||||| |||||||||||||  ||||||||||||| |||||||||||  |||||||    
T  39111819 catttctttattaattttgttttatttcaaaa-aataaagtccctagaatagcgagtccgtttaatgaaacattaagtacgacttaat 39111905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 11536361 - 11536305
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||    
T  11536361 tgttggaataagccctaatagccactctatattgattggttttggctttgtatcatg 11536305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 12750733 - 12750789
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  12750733 tgttggagtaagccctaatagctaatctatattgattgggtttggctttgtatcatg 12750789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 15152350 - 15152406
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  15152350 tgttggagtaagccctaatagccaatctatattgattgggtttggttttgtatcatg 15152406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 29327690 - 29327745
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcat 81  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||    
T  29327690 tgttggagtaagccctaatagccaatctatattgattgggtttggttttgtatcat 29327745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 15148049 - 15148105
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||| |||| ||||||    
T  15148049 tgttggagtaagccctaatagccaatctatattaattgggtttggttttgtatcatg 15148105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 3132748 - 3132809
Alignment:
Q  194 aacattaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaagtat 255  Q
    |||||||||| |||||||||||||||||||| ||||||||||||  |||||| | |||||||    
T  3132748 aacattaagtgtaacttaattgtgagaccccattaaacataaggtcattattatgaaagtat 3132809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 13392030 - 13392085
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcat 81  Q
    ||||||| |||||||||||| ||||||||||||||||| ||||| ||||| |||||    
T  13392030 tgttggagtaagccctaatatccaatctatattgattgtgtttgactttgtatcat 13392085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 10234179 - 10234244
Alignment:
Q  170 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataa 235  Q
    ||||||||||||||||||||||| | |||||| |||||||||||  |||||  || ||||||||||    
T  10234179 tagaatagttagtccgtttaatgaaccattaaatataacttaatcatgagattccattaaacataa 10234244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 18258143 - 18258087
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||| |||||||||||| ||||||||| |||||| ||| ||||||    
T  18258143 tgttggagtaagccctgatagccaatctagattgattggttttggccttgtatcatg 18258087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 152
Target Start/End: Complemental strand, 2653236 - 2653207
Alignment:
Q  123 aggcatttctttattgattttgttttgttt 152  Q
    ||||||||||||||||||||||||||||||    
T  2653236 aggcatttctttattgattttgttttgttt 2653207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 162; Significance: 2e-86; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 123 - 320
Target Start/End: Complemental strand, 24695670 - 24695473
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695670 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 24695571  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || |||||||||| |||| |||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||| |||||||    
T  24695570 ccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgagatatcaataaagcatagagactattatgtaggtagac 24695473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 126 - 320
Target Start/End: Complemental strand, 18570064 - 18569870
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 225  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18570064 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaattgaacattaagtataacttaattgtgagaccccg 18569965  T
Q  226 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||  |||||||||||||||| |||||||||||| |||||||    
T  18569964 ttaaacataaggaaactactcttaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcataaagactattatgttggtagac 18569870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 123 - 320
Target Start/End: Complemental strand, 19714702 - 19714505
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    |||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19714702 aggcatttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 19714603  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    |||||||||||||||||  |||||||||| |||||| |||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||||||||    
T  19714602 ccgttaaacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagac 19714505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 126 - 320
Target Start/End: Complemental strand, 19707419 - 19707225
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 225  Q
    ||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19707419 catttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgagaccccg 19707320  T
Q  226 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    ||||||||||||||  |||||||||| |||||| |||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||||||||    
T  19707319 ttaaacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagac 19707225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 126 - 320
Target Start/End: Complemental strand, 22547217 - 22547023
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 225  Q
    ||||| |||||| |||||||||| ||| ||||||||||   | ||| ||||||||||| ||||||||||||||||||||||||||||| |||||| | |     
T  22547217 catttatttattcattttgttttattttaaaataataaaaccgctataatagttagtcggtttaatggaacattaagtataacttaatcgtgagatctca 22547118  T
Q  226 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    ||||| ||| ||| |||||| ||||||||| || |||||| ||||||||  |||||||||| |||||||  ||| |||||||||||||| |||||    
T  22547117 ttaaatatatggacattatttttaaagtattcgcagtcaaactttattgtgaagtgagataacattaaaatatagagactattatgtggatagac 22547023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 125 - 314
Target Start/End: Complemental strand, 27347679 - 27347491
Alignment:
Q  125 gcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccc 224  Q
    |||||||||| |||||||||||||| ||||||||||||| |||| ||||||| ||| || |||||||||| |||||||| | ||||||| |||||| |||    
T  27347679 gcatttctttgttgattttgttttgattcaaaataataaagtccttagaataattaatctgtttaatggagcattaagtgtgacttaatcgtgaga-ccc 27347581  T
Q  225 gttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgg 314  Q
     ||||||  ||||| ||||||||||||||||  |||||||||||||||||  ||  | |||| |||||||||||| |||||||| |||||    
T  27347580 attaaacgaaaggacattattcttaaagtatatgtagtcaagctttattgtgaaaagggataacattaaagcatagagactattttgtgg 27347491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 124 - 305
Target Start/End: Complemental strand, 17285935 - 17285754
Alignment:
Q  124 ggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccc 223  Q
    ||||||| ||||||||||||||| ||||||||||||||||  |||  ||||||||||||| ||||||||||||||||||| | ||||||| |||| ||||    
T  17285935 ggcatttatttattgattttgttatgtttcaaaataataatctccagagaatagttagtctgtttaatggaacattaagtgtgacttaatcgtgaaaccc 17285836  T
Q  224 cgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagact 305  Q
       |||||  || || |||||||||||||||| | ||||| | ||||||||  || || ||||  |||||||||||||||||    
T  17285835 tagtaaactaaatgacattattcttaaagtattcatagtcgatctttattgtgaattgggatagtattaaagcatatagact 17285754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 39537968 - 39538064
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    |||||||||| ||||||||||||||||||||||  | | |||| |||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  39537968 catttctttaatgattttgttttgtttcaaaatggttaagtccttagaatagttggttcgtttaatggaacattaagtataacttaattgtgagacc 39538064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 124 - 305
Target Start/End: Complemental strand, 17299088 - 17298907
Alignment:
Q  124 ggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccc 223  Q
    ||||||| ||||||||||||||| |||||  |||||||||  |||  ||||||||||||||| |||||||||||||||||   ||||||| |||| ||||    
T  17299088 ggcatttatttattgattttgttatgtttataaataataatatccagagaatagttagtccgattaatggaacattaagtgcgacttaatcgtgaaaccc 17298989  T
Q  224 cgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagact 305  Q
       |||||  || || |||||||||||||||| | ||||| | ||||||||  ||||| ||||  |||||||||||||||||    
T  17298988 tagtaaactaaatgacattattcttaaagtattcatagtcgatctttattgttaagtgggatagtattaaagcatatagact 17298907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 320
Target Start/End: Complemental strand, 18807175 - 18807041
Alignment:
Q  186 tttaatggaacattaagtataacttaattgtgagaccccgttaaacataa-ggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgaga 284  Q
    |||||||||||||||||| | ||||||| ||||||| || ||||| |||| ||| |||||||||||||||||  ||||||||| ||||||  |||| |||    
T  18807175 tttaatggaacattaagtgtgacttaatcgtgagacaccattaaa-ataatggacattattcttaaagtatctatagtcaagcgttattgtgaagtaaga 18807077  T
Q  285 tatcattaaagcatatagactattatgtgggtagac 320  Q
    || || ||||||||| ||||||||||| ||||||||    
T  18807076 taacaataaagcatagagactattatgcgggtagac 18807041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 24695765 - 24695709
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24695765 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 24695709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 31886537 - 31886668
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 225  Q
    |||||||||| |||||||||||||||||||| |||||| |||| ||||||| ||||| | |||||| |||||| |||||  ||||||| ||||||| ||     
T  31886537 catttctttagtgattttgttttgtttcaaattaataaagtccttagaataattagttcatttaattgaacatcaagtacgacttaatcgtgagactcca 31886636  T
Q  226 ttaaacataaggaaattattcttaaagtatcc 257  Q
    ||||  ||||| | | ||||||||||| ||||    
T  31886637 ttaattataagaacaatattcttaaagaatcc 31886668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 19714798 - 19714742
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19714798 tgttggagtaagccctaatagccaatctatattgattgggtttggctttgtatcatg 19714742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 320
Target Start/End: Original strand, 39538701 - 39538788
Alignment:
Q  233 taaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    |||||| | |||||||||| ||||| |||| |||||||||||  ||||| ||||||||||||||||  ||||||||||||||||||||    
T  39538701 taaggacactattcttaaaatatccatagttaagctttattgtgaagtgggatatcattaaagcatgaagactattatgtgggtagac 39538788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 19707518 - 19707462
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  19707518 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 19707462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 27347778 - 27347722
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  27347778 tgttggagtaagccctaatagccaatctatattgattgcgtttggctttgtatcatg 27347722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 18570156 - 18570108
Alignment:
Q  34 taagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||| |||||||| |||||||||| |||||||||||||||| ||||||    
T  18570156 taagctctaatagctaatctatattaattgggtttggctttgtatcatg 18570108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 39537870 - 39537925
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcat 81  Q
    ||||||| |||||||||||||||||||||| |||| || |||| |||||| |||||    
T  39537870 tgttggattaagccctaatagccaatctatgttgactgagtttagctttgtatcat 39537925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 236
Target Start/End: Complemental strand, 33477479 - 33477389
Alignment:
Q  146 tttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataag 236  Q
    |||||||||||||||||| |||| || ||||||||| | | |||||||| |||||||| | |  |||| |||||||| | |||| ||||||    
T  33477479 tttgtttcaaaataataaagtccttacaatagttaggctgattaatggatcattaagtgtgatctaatcgtgagacctcattaatcataag 33477389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 245
Target Start/End: Original strand, 11479420 - 11479496
Alignment:
Q  170 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccc-cgttaaacataaggaaattatt 245  Q
    ||||||| |||||  |||||||| || ||||||| | |||| |||||||||||| | ||||||||||||| ||||||    
T  11479420 tagaataattagtgtgtttaatgaaatattaagtgtgacttgattgtgagaccctcattaaacataaggatattatt 11479496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 159; Significance: 1e-84; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 126 - 312
Target Start/End: Complemental strand, 21330449 - 21330263
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 225  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  21330449 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 21330350  T
Q  226 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgt 312  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||    
T  21330349 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 21330263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 139 - 320
Target Start/End: Original strand, 18796525 - 18796706
Alignment:
Q  139 attttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataagga 238  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||    
T  18796525 attttgttttgtttcaaaataacaaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacctcttttaacataagga 18796624  T
Q  239 aattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
     |||||||||||| |||| |||||||||||||||||  |||||  |||||||||||||||  ||||||||||||||||||||    
T  18796625 tattattcttaaattatctgtagtcaagctttattgtgaagtggtatatcattaaagcattgagactattatgtgggtagac 18796706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 127 - 318
Target Start/End: Original strand, 18619812 - 18620002
Alignment:
Q  127 atttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgt 226  Q
    |||||||| |||||||||||||||||||||||||||| ||||||| |||| |||||| |||||||||| |||||||| | |||||||| ||||| ||| |    
T  18619812 atttctttgttgattttgttttgtttcaaaataataaagtccctataataattagtctgtttaatggagcattaagtgtgacttaattatgaga-cccat 18619910  T
Q  227 taaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtag 318  Q
    |||||| ||||| ||||||||||||||||| || ||||| ||||||||  ||  | ||||  ||||||||||||||||||||||||||||||    
T  18619911 taaacaaaaggatattattcttaaagtatctgtggtcaaactttattgtgaaaagggataatattaaagcatatagactattatgtgggtag 18620002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 126 - 265
Target Start/End: Complemental strand, 19692737 - 19692598
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 225  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||| |||||| ||||||||||||||||||  | |||||||  ||||| | |     
T  19692737 catttctttattgattttgttttgtttcaaaataatgaagtccctagaataattagtctgtttaatggaacattaagcctgacttaatcatgagatctca 19692638  T
Q  226 ttaaacataaggaaattattcttaaagtatccgtagtcaa 265  Q
    ||||||  |||||||||||||||||||||||| |||||||    
T  19692637 ttaaactaaaggaaattattcttaaagtatccttagtcaa 19692598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 185 - 320
Target Start/End: Original strand, 20977957 - 20978092
Alignment:
Q  185 gtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgaga 284  Q
    |||||||||||||||||| |||| |||||  ||||| ||| ||||| ||||||||||||||||||||  |||||||||||||||||| ||  ||||||||    
T  20977957 gtttaatggaacattaagaataatttaatcatgagatcccattaaaaataaggaaattattcttaaaacatccgtagtcaagctttaatgtgaagtgaga 20978056  T
Q  285 tatcattaaagcatatagactattatgtgggtagac 320  Q
    ||||| ||||||||| |||||||||||||| |||||    
T  20978057 tatcactaaagcatagagactattatgtggatagac 20978092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 21330550 - 21330493
Alignment:
Q  25 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21330550 atgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 21330493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 320
Target Start/End: Original strand, 36270199 - 36270366
Alignment:
Q  154 aaaataataaggtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaag 252  Q
    |||||||||| ||||||||||||||||||    |||| || ||  |||||| | ||||||| |||||||  | ||||||| || || | ||||||||||     
T  36270199 aaaataataaagtccctagaatagttagtttacttaaatgaaatgttaagtgtgacttaatcgtgagacatcattaaacacaatgacactattcttaaaa 36270298  T
Q  253 tatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
     ||||||| |||||||||| ||  ||| | |||| |||||||| ||| |||||||| |||||||||||    
T  36270299 catccgtaatcaagctttagtgtgaagagggataacattaaagtataaagactattgtgtgggtagac 36270366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 154 - 312
Target Start/End: Original strand, 18822115 - 18822275
Alignment:
Q  154 aaaataataaggtccctagaatagttagtccgtttaa-tggaaca-ttaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaa 251  Q
    |||||||||| |||  |||||| |||||| ||||||| ||||| | |||||| |  |||||| ||||||| || ||||||| ||||| | ||||||||||    
T  18822115 aaaataataaagtctatagaattgttagttcgtttaaatggaaaaattaagtgtggcttaatcgtgagacaccattaaacacaaggacactattcttaaa 18822214  T
Q  252 gtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgt 312  Q
      ||  ||| |||||||||| |   ||||| ||||||||||||||| ||||| ||||||||    
T  18822215 acatatgtaatcaagctttagtttgaagtgggatatcattaaagcagatagattattatgt 18822275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 156 - 311
Target Start/End: Complemental strand, 36802820 - 36802664
Alignment:
Q  156 aataataaggtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaagta 254  Q
    |||||||| |||| | ||||||||| | ||||||| ||||| ||||| | | |||||||||  |||   | ||||||| || || ||||||||||||  |    
T  36802820 aataataaagtcctttgaatagttaattcgtttaaatggaatattaaatgttacttaattgcaagatatcattaaacacaatgacattattcttaaaaca 36802721  T
Q  255 tccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatg 311  Q
    |||||| ||||| || | || |||||| |||| |||||||||||||||| |||||||    
T  36802720 tccgtaatcaagattcagtgtaaagtgggataacattaaagcatatagattattatg 36802664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 313
Target Start/End: Complemental strand, 24471789 - 24471642
Alignment:
Q  165 gtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaagtatccgtagtca 264  Q
    ||||||| |||| |||||| ||||||| |  ||||| || | |||||||||||||||  | ||  ||||||| | ||||||||| |||||||| ||  ||    
T  24471789 gtccctaaaatatttagtcggtttaatagc-cattatgtgtgacttaattgtgagacatcatttgacataagaacattattctttaagtatccatacaca 24471691  T
Q  265 agctttattgaaaagtgagatatcattaaagcatatagactattatgtg 313  Q
    | || ||||  |||||| |||| || ||||||||| |||||||||||||    
T  24471690 aactctattttaaagtgggataacactaaagcataaagactattatgtg 24471642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 19692829 - 19692773
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||| ||||||||||||| |||| ||| ||||||| |||| ||||||    
T  19692829 tgttggagtaagccttaatagccaatctgtatttattaggtttggttttgtatcatg 19692773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 158; Significance: 5e-84; HSPs: 4)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 123 - 320
Target Start/End: Complemental strand, 7138 - 6941
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  7138 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaactgtgagacc 7039  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    |  ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  7038 ctattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 6941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 123 - 320
Target Start/End: Complemental strand, 14154 - 13957
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  14154 aggcatttctttattgattttgttttgtttcaaaataataaagtccctacaatagttagtccgtttaatggaacattaagtataacttaactgtgagacc 14055  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || ||||||||||||||| |||||| |||||||| |||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  14054 ccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtagac 13957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 7233 - 7177
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||    
T  7233 tgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 7177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 14249 - 14193
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||    
T  14249 tgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 14193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 154; Significance: 1e-81; HSPs: 2)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 127 - 320
Target Start/End: Original strand, 7114 - 7307
Alignment:
Q  127 atttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgt 226  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  7114 atttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatagaacattaagtataacttaattgtgagaccccat 7213  T
Q  227 taaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    ||||||||| |||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  7214 taaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 7307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 7015 - 7071
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7015 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 7071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 154; Significance: 1e-81; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 123 - 320
Target Start/End: Original strand, 18291 - 18488
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  18291 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaattgaacattaagtataacttaattgtgagacc 18390  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    || ||||||||||||||| |||||| |||||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  18391 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 18488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 18196 - 18252
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18196 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 151; Significance: 7e-80; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 126 - 320
Target Start/End: Complemental strand, 26191 - 25997
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 225  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||     
T  26191 catttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccatttaatggaacattaaatataacttaattgtgagacccca 26092  T
Q  226 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||| |||||||    
T  26091 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgaaaagtgggatatcattaaagcatagcgactattatgtaggtagac 25997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 26286 - 26231
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcat 81  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  26286 tgttggaataagccctaatagtcaatctatattgattgggtttggctttgtatcat 26231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 147; Significance: 2e-77; HSPs: 2)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 126 - 320
Target Start/End: Original strand, 999 - 1193
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 225  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||     
T  999 catttctttattgattttgttttgtttcaaaataataaagtccctaaaatagttagtccgtttaatgaaacattaagtataacttaattgtgagacccca 1098  T
Q  226 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 320  Q
    |||||||||| |||| |||||| |||||||| |||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  1099 ttaaacataaagaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 1193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 900 - 957
Alignment:
Q  25 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  900 atgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 957  T

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Target: scaffold0008 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 123 - 299
Target Start/End: Complemental strand, 230544 - 230369
Alignment:
Q  123 aggcatttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| || | || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  230544 aggcatttctttattgattttgttttgtttcaaaataataaagttcttataatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 230445  T
Q  223 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcata 299  Q
    || |||||||||||||||  |||||||||||||  ||||||||| |||||||| ||||| |||||||||||||||||    
T  230444 cc-ttaaacataaggaaaccattcttaaagtatttgtagtcaagatttattgagaagtgggatatcattaaagcata 230369  T

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Target: scaffold0008; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 230640 - 230584
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||  ||||||||||||||||||||||||||||||||||| ||||||    
T  230640 tgttggagtaagcaataatagccaatctatattgattgggtttggctttgtatcatg 230584  T

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Target: scaffold0176 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 8504 - 8446
Alignment:
Q  126 catttctttattgattttgttttgtttcaaaataataaggtccctagaatagttagtcc 184  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8504 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 8446  T

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Target: scaffold0176; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 8602 - 8546
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  8602 tgttggaataagccctaatagccaatctatattgattgggttcggctttgtatcatg 8546  T

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Target: scaffold0203 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 23825 - 23769
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23825 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 23769  T

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Target: scaffold0326 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 16523 - 16571
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggcttt 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16523 tgttggaataagccctaatagccaatctatattgattgggtttggcttt 16571  T

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Target: scaffold0705 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0705
Description:

Target: scaffold0705; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 97 - 41
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||| ||||||  |||||||||| ||||||    
T  97 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 41  T

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Target: scaffold0637 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 8944 - 9000
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||||| ||||||    
T  8944 tgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 9000  T

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Target: scaffold0767 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 42 - 1
Alignment:
Q  21 accaatgttggaataagccctaatagccaatctatattgatt 62  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  42 accactgttggaataagccctaatagccaatctatattgatt 1  T

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Target: scaffold0565 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 10256 - 10202
Alignment:
Q  28 ttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||| ||||| |||||||||||||||||||||||| ||||| ||||| ||||||    
T  10256 ttggagtaagctctaatagccaatctatattgattgagtttgactttgtatcatg 10202  T

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Target: scaffold0032 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 271
Target Start/End: Original strand, 92235 - 92317
Alignment:
Q  189 aatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaagtatccgtagtcaagcttta 271  Q
    ||||||||||||||||||||||||| |||||||  |  ||||||  | |  ||||||||||||  || |||||||||||||||    
T  92235 aatggaacattaagtataacttaatcgtgagacagcaataaacagcaaggcattattcttaaaacattcgtagtcaagcttta 92317  T

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Target: scaffold0170 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 5878 - 5927
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 75  Q
    ||||||| |||| | ||||||||||||||||||||||| ||||| |||||    
T  5878 tgttggagtaagtcataatagccaatctatattgattgagtttgactttg 5927  T

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