View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17543_low_7 (Length: 618)

Name: NF17543_low_7
Description: NF17543
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17543_low_7
NF17543_low_7
[»] chr6 (45 HSPs)
chr6 (180-606)||(34166240-34166666)
chr6 (180-606)||(16554032-16554454)
chr6 (180-606)||(16630588-16631010)
chr6 (180-606)||(16652294-16652716)
chr6 (182-515)||(5407518-5407846)
chr6 (182-515)||(5411843-5412171)
chr6 (1-179)||(34164996-34165174)
chr6 (182-515)||(5406750-5407077)
chr6 (182-515)||(5411075-5411402)
chr6 (1-179)||(33341955-33342135)
chr6 (1-179)||(13154053-13154231)
chr6 (443-606)||(16568320-16568482)
chr6 (1-179)||(34167218-34167396)
chr6 (1-179)||(25421444-25421622)
chr6 (1-179)||(16555007-16555183)
chr6 (1-179)||(16578372-16578548)
chr6 (1-179)||(16616832-16617008)
chr6 (1-179)||(16631563-16631739)
chr6 (1-179)||(16653250-16653426)
chr6 (5-176)||(6027388-6027558)
chr6 (393-606)||(30444704-30444917)
chr6 (180-344)||(16568485-16568632)
chr6 (476-606)||(11137488-11137619)
chr6 (1-175)||(27648002-27648167)
chr6 (48-179)||(412240-412369)
chr6 (540-606)||(5407076-5407142)
chr6 (540-606)||(5411401-5411467)
chr6 (507-565)||(22615097-22615155)
chr6 (1-61)||(6136155-6136216)
chr6 (112-179)||(3072722-3072789)
chr6 (110-179)||(6097411-6097481)
chr6 (180-236)||(11857567-11857623)
chr6 (180-236)||(14741870-14741926)
chr6 (180-236)||(33335373-33335429)
chr6 (395-541)||(15533622-15533768)
chr6 (141-179)||(2171524-2171562)
chr6 (294-367)||(33310495-33310567)
chr6 (1-37)||(13159051-13159087)
chr6 (507-585)||(10456365-10456444)
chr6 (507-606)||(17758659-17758758)
chr6 (145-179)||(16452325-16452359)
chr6 (476-530)||(24543546-24543600)
chr6 (346-463)||(28038602-28038720)
chr6 (505-554)||(3631038-3631087)
chr6 (320-365)||(30729571-30729616)
[»] chr3 (70 HSPs)
chr3 (180-606)||(10057601-10058027)
chr3 (180-606)||(10059823-10060249)
chr3 (180-606)||(10062045-10062471)
chr3 (180-606)||(10064267-10064693)
chr3 (180-606)||(10066489-10066915)
chr3 (180-606)||(4599107-4599531)
chr3 (180-606)||(10210554-10210978)
chr3 (180-606)||(6717865-6718288)
chr3 (182-606)||(5258717-5259136)
chr3 (180-606)||(23198530-23198952)
chr3 (182-577)||(9634892-9635283)
chr3 (180-605)||(29812225-29812641)
chr3 (185-606)||(7763624-7764026)
chr3 (1-179)||(10056357-10056535)
chr3 (1-179)||(10058579-10058757)
chr3 (1-179)||(10060801-10060979)
chr3 (1-179)||(10063023-10063201)
chr3 (1-179)||(10065245-10065423)
chr3 (1-179)||(10067444-10067622)
chr3 (1-179)||(10211533-10211711)
chr3 (1-179)||(4598375-4598553)
chr3 (1-179)||(10209313-10209491)
chr3 (1-179)||(4600596-4600774)
chr3 (180-420)||(37407799-37408036)
chr3 (1-179)||(3617588-3617766)
chr3 (1-179)||(25637565-25637746)
chr3 (299-604)||(15824365-15824667)
chr3 (5-179)||(45283124-45283297)
chr3 (476-606)||(32892443-32892573)
chr3 (1-179)||(54635262-54635438)
chr3 (382-483)||(43403017-43403118)
chr3 (5-179)||(6716637-6716811)
chr3 (507-606)||(43403172-43403271)
chr3 (182-285)||(40734901-40735005)
chr3 (182-285)||(44331042-44331146)
chr3 (112-179)||(801230-801297)
chr3 (180-236)||(1306604-1306660)
chr3 (180-236)||(2676518-2676574)
chr3 (180-236)||(3327786-3327842)
chr3 (180-236)||(6794164-6794220)
chr3 (180-236)||(8512827-8512883)
chr3 (180-236)||(28503263-28503319)
chr3 (180-236)||(32476072-32476128)
chr3 (112-179)||(23200102-23200168)
chr3 (323-606)||(53916584-53916873)
chr3 (508-606)||(1619605-1619705)
chr3 (318-370)||(10956972-10957024)
chr3 (180-236)||(37466897-37466952)
chr3 (318-370)||(43227663-43227715)
chr3 (112-179)||(23197903-23197969)
chr3 (337-527)||(23634904-23635098)
chr3 (294-367)||(11169687-11169759)
chr3 (323-372)||(42991579-42991628)
chr3 (318-370)||(4309135-4309187)
chr3 (180-236)||(4386446-4386501)
chr3 (112-179)||(7779967-7780034)
chr3 (180-236)||(22172606-22172662)
chr3 (477-606)||(28138308-28138440)
chr3 (208-240)||(43402625-43402657)
chr3 (323-370)||(35918808-35918855)
chr3 (293-367)||(457492-457565)
chr3 (293-367)||(6064393-6064466)
chr3 (145-179)||(7762403-7762437)
chr3 (145-179)||(9581420-9581454)
chr3 (141-179)||(9636118-9636156)
chr3 (145-179)||(19683885-19683919)
chr3 (505-606)||(27422031-27422133)
chr3 (294-372)||(43422353-43422430)
chr3 (145-179)||(45095301-45095335)
chr3 (505-606)||(4309301-4309405)
[»] chr4 (38 HSPs)
chr4 (180-606)||(5137448-5137875)
chr4 (180-606)||(8394774-8395191)
chr4 (180-606)||(7124064-7124489)
chr4 (182-606)||(12740129-12740546)
chr4 (182-606)||(12748335-12748752)
chr4 (182-605)||(34570996-34571410)
chr4 (359-606)||(54881938-54882184)
chr4 (1-179)||(5136203-5136382)
chr4 (1-179)||(5138428-5138607)
chr4 (1-179)||(8393532-8393711)
chr4 (1-179)||(8395741-8395920)
chr4 (1-166)||(7125053-7125218)
chr4 (1-166)||(7122834-7122999)
chr4 (306-541)||(10114044-10114279)
chr4 (296-606)||(26559022-26559332)
chr4 (294-606)||(14788315-14788632)
chr4 (180-235)||(18856309-18856364)
chr4 (346-541)||(36770653-36770849)
chr4 (180-236)||(9228630-9228686)
chr4 (112-179)||(31495279-31495346)
chr4 (294-372)||(16454679-16454756)
chr4 (323-370)||(22133210-22133257)
chr4 (182-236)||(16628290-16628344)
chr4 (323-606)||(22801682-22801971)
chr4 (323-541)||(36379427-36379649)
chr4 (294-367)||(16932749-16932821)
chr4 (182-236)||(3778174-3778227)
chr4 (479-606)||(9175241-9175371)
chr4 (332-554)||(12401676-12401901)
chr4 (475-606)||(22133346-22133480)
chr4 (145-179)||(56178633-56178667)
chr4 (476-541)||(16454507-16454572)
chr4 (318-367)||(22781361-22781410)
chr4 (318-362)||(9175094-9175138)
chr4 (293-365)||(11007168-11007239)
chr4 (332-372)||(12396734-12396774)
chr4 (505-606)||(16932942-16933046)
chr4 (318-366)||(22045339-22045387)
[»] chr7 (52 HSPs)
chr7 (180-606)||(6592921-6593345)
chr7 (180-606)||(18390562-18390983)
chr7 (182-606)||(48490759-48491177)
chr7 (180-605)||(47674533-47674950)
chr7 (1-179)||(18392048-18392226)
chr7 (1-179)||(18388612-18388790)
chr7 (1-179)||(6594410-6594588)
chr7 (1-179)||(6592192-6592370)
chr7 (1-179)||(32060174-32060352)
chr7 (1-179)||(1560517-1560696)
chr7 (393-606)||(6047903-6048115)
chr7 (377-554)||(26214194-26214370)
chr7 (294-554)||(44726063-44726326)
chr7 (324-599)||(24815942-24816219)
chr7 (512-600)||(6430761-6430849)
chr7 (180-236)||(12397492-12397548)
chr7 (180-236)||(20000334-20000390)
chr7 (180-236)||(21640423-21640479)
chr7 (180-236)||(24265621-24265677)
chr7 (509-565)||(25559994-25560050)
chr7 (294-370)||(28486877-28486952)
chr7 (507-606)||(4509986-4510085)
chr7 (507-606)||(4511828-4511927)
chr7 (53-179)||(20344035-20344158)
chr7 (112-179)||(39731507-39731573)
chr7 (346-463)||(44011447-44011565)
chr7 (318-370)||(43852-43904)
chr7 (180-236)||(16880660-16880716)
chr7 (180-236)||(18409399-18409455)
chr7 (112-179)||(24789979-24790047)
chr7 (112-179)||(43504117-43504184)
chr7 (294-372)||(21679388-21679465)
chr7 (141-179)||(35854052-35854090)
chr7 (318-367)||(1047912-1047961)
chr7 (393-490)||(4509842-4509939)
chr7 (393-490)||(4511684-4511781)
chr7 (180-236)||(9189444-9189499)
chr7 (318-370)||(20298592-20298644)
chr7 (514-554)||(38281328-38281368)
chr7 (323-554)||(38395429-38395663)
chr7 (479-606)||(7093229-7093359)
chr7 (145-179)||(23555178-23555212)
chr7 (141-179)||(25766952-25766990)
chr7 (475-606)||(28486654-28486788)
chr7 (145-179)||(29991191-29991225)
chr7 (293-367)||(31156885-31156958)
chr7 (145-179)||(34310712-34310746)
chr7 (293-366)||(7350252-7350324)
chr7 (476-606)||(20298369-20298502)
chr7 (318-367)||(22136419-22136468)
chr7 (318-367)||(40551446-40551495)
chr7 (207-235)||(38281765-38281793)
[»] chr5 (42 HSPs)
chr5 (180-606)||(40381472-40381889)
chr5 (180-606)||(16545796-16546216)
chr5 (180-606)||(29721727-29722152)
chr5 (180-606)||(16408654-16409077)
chr5 (219-606)||(26174134-26174517)
chr5 (182-605)||(13487380-13487796)
chr5 (180-601)||(42426825-42427243)
chr5 (296-605)||(535090-535399)
chr5 (1-179)||(16544547-16544727)
chr5 (1-179)||(16546769-16546949)
chr5 (1-179)||(25078259-25078437)
chr5 (1-179)||(25136228-25136406)
chr5 (1-179)||(40380229-40380407)
chr5 (1-179)||(40382440-40382618)
chr5 (1-179)||(10593396-10593574)
chr5 (445-606)||(13294994-13295155)
chr5 (1-179)||(29720502-29720677)
chr5 (1-179)||(29751014-29751190)
chr5 (1-179)||(29722662-29722837)
chr5 (500-606)||(13693988-13694095)
chr5 (31-179)||(22536175-22536320)
chr5 (31-179)||(9789107-9789254)
chr5 (180-236)||(27445566-27445622)
chr5 (180-236)||(28807020-28807076)
chr5 (180-236)||(31401290-31401346)
chr5 (180-236)||(37560891-37560947)
chr5 (180-236)||(43592854-43592910)
chr5 (180-236)||(43625648-43625704)
chr5 (112-179)||(16409613-16409681)
chr5 (112-179)||(26170900-26170968)
chr5 (112-179)||(26178020-26178088)
chr5 (180-234)||(33768772-33768826)
chr5 (114-179)||(18441612-18441678)
chr5 (294-372)||(659339-659416)
chr5 (145-179)||(37439279-37439313)
chr5 (318-367)||(15355476-15355525)
chr5 (323-372)||(18510324-18510373)
chr5 (318-367)||(23666649-23666698)
chr5 (327-367)||(10756500-10756540)
chr5 (182-285)||(18468598-18468697)
chr5 (182-285)||(18509908-18510007)
chr5 (323-367)||(34478048-34478092)
[»] chr8 (29 HSPs)
chr8 (182-606)||(34254900-34255319)
chr8 (182-605)||(4732985-4733403)
chr8 (1-179)||(42575177-42575354)
chr8 (1-179)||(15290662-15290840)
chr8 (1-179)||(15471031-15471209)
chr8 (182-606)||(41365408-41365826)
chr8 (301-606)||(31574457-31574763)
chr8 (1-179)||(25690092-25690269)
chr8 (394-606)||(42436230-42436428)
chr8 (31-179)||(3439641-3439788)
chr8 (294-541)||(41383855-41384104)
chr8 (296-541)||(17849089-17849332)
chr8 (180-236)||(10688562-10688618)
chr8 (180-236)||(33037231-33037287)
chr8 (48-179)||(2627874-2628002)
chr8 (182-234)||(35741124-35741176)
chr8 (293-367)||(43081263-43081336)
chr8 (180-236)||(19751833-19751888)
chr8 (323-375)||(21481848-21481900)
chr8 (296-342)||(5645994-5646040)
chr8 (145-179)||(17982791-17982825)
chr8 (296-412)||(29797062-29797175)
chr8 (145-179)||(31218395-31218429)
chr8 (145-179)||(34254327-34254361)
chr8 (145-179)||(34256503-34256537)
chr8 (145-179)||(42498332-42498366)
chr8 (146-179)||(1746216-1746249)
chr8 (398-483)||(40220644-40220728)
chr8 (327-367)||(27828647-27828687)
[»] scaffold0491 (3 HSPs)
scaffold0491 (180-606)||(9308-9730)
scaffold0491 (112-179)||(11125-11191)
scaffold0491 (116-179)||(8703-8765)
[»] chr1 (44 HSPs)
chr1 (180-606)||(776427-776847)
chr1 (219-605)||(28221484-28221865)
chr1 (306-606)||(50167864-50168164)
chr1 (306-605)||(13548197-13548495)
chr1 (296-605)||(28221927-28222236)
chr1 (397-606)||(28242939-28243147)
chr1 (1-179)||(44203770-44203948)
chr1 (441-605)||(31658497-31658660)
chr1 (1-179)||(9036554-9036731)
chr1 (397-606)||(31928880-31929087)
chr1 (31-179)||(21054096-21054242)
chr1 (393-490)||(19753438-19753535)
chr1 (6-179)||(20622097-20622267)
chr1 (31-179)||(9987339-9987486)
chr1 (31-179)||(40282515-40282661)
chr1 (306-606)||(13126300-13126600)
chr1 (207-345)||(31658658-31658791)
chr1 (180-236)||(25444536-25444592)
chr1 (180-236)||(41391185-41391241)
chr1 (294-606)||(14098807-14099124)
chr1 (323-527)||(16430108-16430316)
chr1 (507-606)||(19753292-19753391)
chr1 (323-372)||(31423946-31423995)
chr1 (180-236)||(19360856-19360912)
chr1 (180-236)||(47102278-47102333)
chr1 (323-370)||(27337758-27337805)
chr1 (323-370)||(28841961-28842008)
chr1 (323-370)||(31736440-31736487)
chr1 (112-179)||(51765535-51765601)
chr1 (293-367)||(47178969-47179042)
chr1 (294-367)||(16227774-16227846)
chr1 (476-606)||(31736577-31736710)
chr1 (318-367)||(51751644-51751693)
chr1 (323-370)||(20301735-20301782)
chr1 (145-179)||(3189468-3189502)
chr1 (145-179)||(3198285-3198319)
chr1 (145-179)||(3207124-3207158)
chr1 (145-179)||(8550783-8550817)
chr1 (145-179)||(13316348-13316382)
chr1 (145-179)||(20762810-20762844)
chr1 (294-372)||(25249534-25249611)
chr1 (180-214)||(44023343-44023377)
chr1 (294-372)||(50077676-50077753)
chr1 (475-590)||(6996681-6996798)
[»] scaffold1908 (1 HSPs)
scaffold1908 (207-606)||(717-1111)
[»] chr2 (21 HSPs)
chr2 (180-606)||(14634403-14634812)
chr2 (1-179)||(12647238-12647416)
chr2 (1-179)||(13655881-13656062)
chr2 (359-606)||(28569036-28569286)
chr2 (1-179)||(6266829-6267003)
chr2 (180-234)||(19345010-19345064)
chr2 (294-554)||(21519240-21519502)
chr2 (112-179)||(32289702-32289770)
chr2 (112-179)||(4484294-4484360)
chr2 (507-554)||(16604652-16604699)
chr2 (112-179)||(30833484-30833550)
chr2 (323-589)||(6263065-6263335)
chr2 (145-179)||(4503129-4503163)
chr2 (145-179)||(36205661-36205695)
chr2 (145-179)||(36988072-36988106)
chr2 (182-236)||(39483502-39483555)
chr2 (145-179)||(45099892-45099926)
chr2 (507-548)||(27894193-27894234)
chr2 (318-367)||(36559768-36559817)
chr2 (394-463)||(42018503-42018572)
chr2 (306-409)||(13829047-13829151)
[»] scaffold0137 (1 HSPs)
scaffold0137 (1-179)||(6411-6591)
[»] scaffold1808 (1 HSPs)
scaffold1808 (1-179)||(3-181)
[»] scaffold0674 (1 HSPs)
scaffold0674 (1-179)||(3578-3756)
[»] scaffold0565 (1 HSPs)
scaffold0565 (1-179)||(2456-2634)
[»] scaffold0005 (1 HSPs)
scaffold0005 (294-606)||(51098-51415)
[»] scaffold0259 (1 HSPs)
scaffold0259 (180-236)||(1683-1739)
[»] scaffold0219 (1 HSPs)
scaffold0219 (522-601)||(23084-23164)
[»] scaffold0197 (2 HSPs)
scaffold0197 (180-236)||(13728-13784)
scaffold0197 (180-236)||(18607-18663)
[»] scaffold0286 (1 HSPs)
scaffold0286 (141-179)||(11695-11733)
[»] scaffold0133 (1 HSPs)
scaffold0133 (323-463)||(4010-4151)
[»] scaffold0025 (1 HSPs)
scaffold0025 (323-370)||(70156-70203)
[»] scaffold1519 (1 HSPs)
scaffold1519 (145-179)||(1053-1087)
[»] scaffold0140 (1 HSPs)
scaffold0140 (318-367)||(23730-23779)
[»] scaffold1674 (2 HSPs)
scaffold1674 (318-370)||(411-463)
scaffold1674 (505-606)||(582-686)
[»] scaffold0002 (1 HSPs)
scaffold0002 (147-179)||(434671-434703)


Alignment Details
Target: chr6 (Bit Score: 411; Significance: 0; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 411; E-Value: 0
Query Start/End: Original strand, 180 - 606
Target Start/End: Complemental strand, 34166666 - 34166240
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttcccttgcatccaactctacaccaagttgctcc 279  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34166666 atttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttcccttgcatccaactctacaccaagttgctcc 34166567  T
Q  280 acaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaat 379  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34166566 acaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaat 34166467  T
Q  380 cacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctcc 479  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34166466 cacacaagccaccccatacattcttcaaaccccggaataccatccgtcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctcc 34166367  T
Q  480 atagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccac 579  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34166366 atagccgtaccatttccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccac 34166267  T
Q  580 tccacctcaaaggttgatcacgagtat 606  Q
    |||||||||||||||||||||||||||    
T  34166266 tccacctcaaaggttgatcacgagtat 34166240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 180 - 606
Target Start/End: Complemental strand, 16554454 - 16554032
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttc-----ccttgcatccaactctacaccaagtt 274  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||     ||||||||||||||||||  ||||||    
T  16554454 atttctccaccttgacttctaatttggcgatgatgccactttaaccatcaaccaccaatctcccttttcttttcccttgcatccaactctac--caagtt 16554357  T
Q  275 gctccacaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttag 374  Q
    ||||||||||||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16554356 gctccacaagtcttca-------ccaagccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggtcttttag 16554264  T
Q  375 gcaatcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaag 474  Q
    | ||||||||||||| | |||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||| |||||||||||||||    
T  16554263 gtaatcacacaagcctccccatacattcttcaaaccccggaataccttccgtcctcatgaagaattcacatgctcaccactagaacataaactcccaaag 16554164  T
Q  475 cctccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgcctt 574  Q
    ||||||||| | |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||    
T  16554163 cctccatagtcataccattcccggtgtcatcaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccacttt 16554064  T
Q  575 gccactccacctcaaaggttgatcacgagtat 606  Q
    || |||||||||||||||||||||||||||||    
T  16554063 gcaactccacctcaaaggttgatcacgagtat 16554032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 180 - 606
Target Start/End: Complemental strand, 16631010 - 16630588
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttc-----ccttgcatccaactctacaccaagtt 274  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||     ||||||||||||||||||  ||||||    
T  16631010 atttctccaccttgacttctaatttggcgatgatgccactttaaccatcaaccaccaatctcccttttcttttcccttgcatccaactctac--caagtt 16630913  T
Q  275 gctccacaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttag 374  Q
    ||||||||||||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16630912 gctccacaagtcttca-------ccaagccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggtcttttag 16630820  T
Q  375 gcaatcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaag 474  Q
    | ||||||||||||| | |||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||| |||||||||||||||    
T  16630819 gtaatcacacaagcctccccatacattcttcaaaccccggaataccttccgtcctcatgaagaattcacatgctcaccactagaacataaactcccaaag 16630720  T
Q  475 cctccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgcctt 574  Q
    ||||||||| | |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||    
T  16630719 cctccatagtcataccattcccggtgtcatcaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccacttt 16630620  T
Q  575 gccactccacctcaaaggttgatcacgagtat 606  Q
    || |||||||||||||||||||||||||||||    
T  16630619 gcaactccacctcaaaggttgatcacgagtat 16630588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 180 - 606
Target Start/End: Complemental strand, 16652716 - 16652294
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttc-----ccttgcatccaactctacaccaagtt 274  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||     ||||||||||||||||||  ||||||    
T  16652716 atttctccaccttgacttcaaatttggtgatgatgccactttaaccatcaaccaccaatctcccttttcttttcccttgcatccaactctac--caagtt 16652619  T
Q  275 gctccacaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttag 374  Q
    ||||||||||||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  16652618 gctccacaagtcttca-------ccaagccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttacatccgatcacccttggtcttttag 16652526  T
Q  375 gcaatcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaag 474  Q
    | ||||||||||||| | |||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||| |||||||||||||||    
T  16652525 gtaatcacacaagcctccccatacattcttcaaaccccggaataccttccgtcctcatgaagaattcacatgctcaccactagaacataaactcccaaag 16652426  T
Q  475 cctccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgcctt 574  Q
    ||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||    
T  16652425 cctccatagtcgtaccattcccggtgtcatcaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccacttt 16652326  T
Q  575 gccactccacctcaaaggttgatcacgagtat 606  Q
    || |||||||||||||||||||||||||||||    
T  16652325 gcaactccacctcaaaggttgatcacgagtat 16652294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 182 - 515
Target Start/End: Original strand, 5407518 - 5407846
Alignment:
Q  182 ttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttc-----ccttgcatccaactctacaccaagttgc 276  Q
    ||||||||||||| ||| |||| | ||||||||||||||||||||||| |||||||| | |||||||     ||||||||||||||  |||||||||| |    
T  5407518 ttctccaccttgacttcaaatt-gatgatgatgccactttaaccatcatccaccaatatcccttttcttttcccttgcatccaact--acaccaagttac 5407614  T
Q  277 tccacaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggc 376  Q
    ||||||||||| ||       ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||     
T  5407615 tccacaagtctaca-------ccaaaccatcttcaaccacggaacgtctcccgcttccccgaagatcaccttgcatccgatcacccttggtcttttaggt 5407707  T
Q  377 aatcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcc 476  Q
    ||||||||||| ||| ||||||||||||||||||  ||||| || ||| |||||||||||| |  |||||||||| |||||||||||||  ||||| |||    
T  5407708 aatcacacaagtcacaccatacattcttcaaaccttggaatgccttccgtcctcatgaagagtttacatgctcacaactagagcataaatacccaaggcc 5407807  T
Q  477 tccatagccgtaccattcccggagtcaccaactccacct 515  Q
    |||||||  ||||||||||||| |||| |||||||||||    
T  5407808 tccatagttgtaccattcccggtgtcatcaactccacct 5407846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 182 - 515
Target Start/End: Original strand, 5411843 - 5412171
Alignment:
Q  182 ttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttc-----ccttgcatccaactctacaccaagttgc 276  Q
    ||||||||||||| ||| |||| | ||||||||||||||||||||||| |||||||| | |||||||     ||||||||||||||  |||||||||| |    
T  5411843 ttctccaccttgacttcaaatt-gatgatgatgccactttaaccatcatccaccaatatcccttttcttttcccttgcatccaact--acaccaagttac 5411939  T
Q  277 tccacaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggc 376  Q
    ||||||||||| ||       ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||     
T  5411940 tccacaagtctaca-------ccaaaccatcttcaaccacggaacgtctcccgcttccccgaagatcaccttgcatccgatcacccttggtcttttaggt 5412032  T
Q  377 aatcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcc 476  Q
    ||||||||||| ||| ||||||||||||||||||  ||||| || ||| |||||||||||| |  |||||||||| |||||||||||||  ||||| |||    
T  5412033 aatcacacaagtcacaccatacattcttcaaaccttggaatgccttccgtcctcatgaagagtttacatgctcacaactagagcataaatacccaaggcc 5412132  T
Q  477 tccatagccgtaccattcccggagtcaccaactccacct 515  Q
    |||||||  ||||||||||||| |||| |||||||||||    
T  5412133 tccatagttgtaccattcccggtgtcatcaactccacct 5412171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 34165174 - 34164996
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaacaccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaaca 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  34165174 gagtggtaaccaccaaaccaagcttattgagcaagcaagaaacaacaaacaccacctagatccaatctaggaaacaagtgtgaaacaaagcaactaaaca 34165075  T
Q  101 caagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    ||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34165074 caagata-aacaaggagagggaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgaccta 34164996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 182 - 515
Target Start/End: Original strand, 5406750 - 5407077
Alignment:
Q  182 ttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttcc-----cttgcatccaactctacaccaagttgc 276  Q
    ||||||||||||| ||  |||| | |||||||||||||||||||||||||||||||||| |||||||      |||||||||||||  ||||||||||||    
T  5406750 ttctccaccttgacttgaaatt-gatgatgatgccactttaaccatcaaccaccaatctcccttttcttttcgcttgcatccaact--acaccaagttgc 5406846  T
Q  277 tccacaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggc 376  Q
    | ||||||||| ||       ||||||||||||||||||||||||||||||||| ||| ||||||||||||||| || ||||||| |||| ||||||||     
T  5406847 ttcacaagtctaca-------ccaaaccatcttcaaccacggaacgtctcccgcttccccgaagatcaccttgcttctgatcaccattggtcttttaggt 5406939  T
Q  377 aatcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcc 476  Q
    |||||||||||||||  ||| |||||||||||||||||||| || ||  | |||||||||| |  |||||||||| ||| |||||||||  ||||| |||    
T  5406940 aatcacacaagccacatcatgcattcttcaaaccccggaatgccttctgt-ctcatgaagagttaacatgctcacaactggagcataaatacccaaggcc 5407038  T
Q  477 tccatagccgtaccattcccggagtcaccaactccacct 515  Q
    ||||||| |||||||||||||| |||| |||||||||||    
T  5407039 tccatagtcgtaccattcccggtgtcatcaactccacct 5407077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 182 - 515
Target Start/End: Original strand, 5411075 - 5411402
Alignment:
Q  182 ttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttcc-----cttgcatccaactctacaccaagttgc 276  Q
    ||||||||||||| ||  |||| | |||||||||||||||||||||||||||||||||| |||||||      |||||||||||||  ||||||||||||    
T  5411075 ttctccaccttgacttgaaatt-gatgatgatgccactttaaccatcaaccaccaatctcccttttcttttcgcttgcatccaact--acaccaagttgc 5411171  T
Q  277 tccacaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggc 376  Q
    | ||||||||| ||       ||||||||||||||||||||||||||||||||| ||| ||||||||||||||| || ||||||| |||| ||||||||     
T  5411172 ttcacaagtctaca-------ccaaaccatcttcaaccacggaacgtctcccgcttccccgaagatcaccttgcttctgatcaccattggtcttttaggt 5411264  T
Q  377 aatcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcc 476  Q
    |||||||||||||||  ||| |||||||||||||||||||| || ||  | |||||||||| |  |||||||||| ||| |||||||||  ||||| |||    
T  5411265 aatcacacaagccacatcatgcattcttcaaaccccggaatgccttctgt-ctcatgaagagttaacatgctcacaactggagcataaatacccaaggcc 5411363  T
Q  477 tccatagccgtaccattcccggagtcaccaactccacct 515  Q
    ||||||| |||||||||||||| |||| |||||||||||    
T  5411364 tccatagtcgtaccattcccggtgtcatcaactccacct 5411402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 33341955 - 33342135
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaac 99  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||| ||||    
T  33341955 gagtggtaaccaccaaacaaagcttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacaaagcaactaaac 33342054  T
Q  100 acaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||| |  |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33342055 acaagataaacaaaggagagggaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgaccta 33342135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 13154231 - 13154053
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaa-acaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaaccaa 97  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||  ||||||||| |||    
T  13154231 gagtggtaaccacctaacaaagcttattgagcaagcaagaaacaacaatacaccacctagatcgaatctaggaaccaagtgtgaaacacaaagcaa-caa 13154133  T
Q  98 acacaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
     ||||||||   |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13154132 tcacaagat---acaaggagagggaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgaccta 13154053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 443 - 606
Target Start/End: Complemental strand, 16568482 - 16568320
Alignment:
Q  443 catgctcaccactagagcataaactcccaaagcctccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaactt 542  Q
    ||||||||| |||||||||||| ||||||| | ||||||||  ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  16568482 catgctcacaactagagcataa-ctcccaaggtctccatagttgtaccattcccggtgtcaccaactccacctcaagttgagatttctctacctcaactt 16568384  T
Q  543 ccaaatgagtacttccactatgcttccgccttgccactccacctcaaaggttgatcacgagtat 606  Q
    |||||| |||||   |||||||||||| |||||  |||||||||||||||||||||||||||||    
T  16568383 ccaaattagtacacacactatgcttccaccttgtaactccacctcaaaggttgatcacgagtat 16568320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 34167396 - 34167218
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaaaca--aagcaaccaa 97  Q
    |||||||||||||||||||||   |||||||||||||| |||||||||| ||||||||||||| |||||||||| |||||||||||||  ||||||| ||    
T  34167396 gagtggtaaccaccaaacaaaaaatattgagcaagcaaaaaacaacaaaacaccacctagatcaaatctaggaaccaagtgtgaaacacaaagcaac-aa 34167298  T
Q  98 acacaagatagaacaaggagagggaagatgaaaacaataaacacaa-gagattggtcacccagttcggtccaaacttgaccta 179  Q
     |||||||||   ||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  34167297 tcacaagata---caaggagagggaagaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgaccta 34167218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 25421622 - 25421444
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaac-aaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaaccaa 97  Q
    |||||||||||||| ||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||||| ||||||||||  ||||||||| |||    
T  25421622 gagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaa-caa 25421524  T
Q  98 acacaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
     ||||||||| ||||||  ||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  25421523 tcacaagata-aacaag--gagggaagaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgaccta 25421444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 16555183 - 16555007
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaa--acaaagcaaccaa 97  Q
    ||||||||||||||||||||||  | |   |||||||| |||||||||| ||||||||||||| |||||||||||||||||||||  ||||||||  |||    
T  16555183 gagtggtaaccaccaaacaaagtgtgt---gcaagcaacaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagca--caa 16555089  T
Q  98 acacaagatagaacaaggagagggaagatgaaaac-aataaacacaagagattggtcacccagttcggtccaaacttgaccta 179  Q
     ||||||||| ||||||||||||||||| |||||| |||| ||  ||||||||| ||||||||||||||||||||||||||||    
T  16555088 tcacaagata-aacaaggagagggaagaagaaaacaaatacaccaaagagattgttcacccagttcggtccaaacttgaccta 16555007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 16578372 - 16578548
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaa--acaaagcaaccaa 97  Q
    ||||||||||||||||||||||  | |   |||||||| |||||||||| ||||||||||||| |||||||||||||||||||||  ||||||||  |||    
T  16578372 gagtggtaaccaccaaacaaagtgtgt---gcaagcaacaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagca--caa 16578466  T
Q  98 acacaagatagaacaaggagagggaagatgaaaac-aataaacacaagagattggtcacccagttcggtccaaacttgaccta 179  Q
     ||||||||| ||||||||||||||||| |||||| |||| ||  ||||||||| ||||||||||||||||||||||||||||    
T  16578467 tcacaagata-aacaaggagagggaagaagaaaacaaatacaccaaagagattgttcacccagttcggtccaaacttgaccta 16578548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 16617008 - 16616832
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaa--acaaagcaaccaa 97  Q
    ||||||||||||||||||||||  | |   |||||||| |||||||||| ||||||||||||| |||||||||||||||||||||  ||||||||  |||    
T  16617008 gagtggtaaccaccaaacaaagtgtgt---gcaagcaacaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagca--caa 16616914  T
Q  98 acacaagatagaacaaggagagggaagatgaaaac-aataaacacaagagattggtcacccagttcggtccaaacttgaccta 179  Q
     ||||||||| ||||||||||||||||| |||||| |||| ||  ||||||||| ||||||||||||||||||||||||||||    
T  16616913 tcacaagata-aacaaggagagggaagaagaaaacaaatacaccaaagagattgttcacccagttcggtccaaacttgaccta 16616832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 16631739 - 16631563
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaa--acaaagcaaccaa 97  Q
    ||||||||||||||||||||||  | |   |||||||| |||||||||| ||||||||||||| |||||||||||||||||||||  ||||||||  |||    
T  16631739 gagtggtaaccaccaaacaaagtgtgt---gcaagcaacaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagca--caa 16631645  T
Q  98 acacaagatagaacaaggagagggaagatgaaaac-aataaacacaagagattggtcacccagttcggtccaaacttgaccta 179  Q
     ||||||||| ||||||||||||||||| |||||| |||| ||  ||||||||| ||||||||||||||||||||||||||||    
T  16631644 tcacaagata-aacaaggagagggaagaagaaaacaaatacaccaaagagattgttcacccagttcggtccaaacttgaccta 16631563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 16653426 - 16653250
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaa--acaaagcaaccaa 97  Q
    ||||||||||||||||||||||  | |   |||||||| |||||||||| ||||||||||||| |||||||||||||||||||||  ||||||||  |||    
T  16653426 gagtggtaaccaccaaacaaagtgtgt---gcaagcaacaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagca--caa 16653332  T
Q  98 acacaagatagaacaaggagagggaagatgaaaac-aataaacacaagagattggtcacccagttcggtccaaacttgaccta 179  Q
     ||||||||| ||||||||||||||||| |||||| |||| ||  ||||||||| ||||||||||||||||||||||||||||    
T  16653331 tcacaagata-aacaaggagagggaagaagaaaacaaatacaccaaagagattgttcacccagttcggtccaaacttgaccta 16653250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 5 - 176
Target Start/End: Complemental strand, 6027558 - 6027388
Alignment:
Q  5 ggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaa--acaaagcaaccaaacac 101  Q
    |||||||||| ||||| |  ||||| ||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||  ||||||||| ||| |||    
T  6027558 ggtaaccacctaacaaggtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaa-caatcac 6027460  T
Q  102 aagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgac 176  Q
    ||||||    ||   ||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  6027459 aagata----aaatggagggaagaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgac 6027388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 393 - 606
Target Start/End: Complemental strand, 30444917 - 30444704
Alignment:
Q  393 ccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctccatagccgtaccat 492  Q
    |||||||||||||||||||| |||| || ||  ||||| |||||||| | | ||||||| |||||||  ||  | ||||| | |||||||| |||||||     
T  30444917 ccatacattcttcaaacccctgaatgccttctgtcctcttgaagaattctcttgctcacaactagagactag-cacccaatgtctccatagtcgtaccac 30444819  T
Q  493 tcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatg-cttccgccttgccactccacctcaaag 591  Q
    |  | | |||| ||||||||||||||| ||| ||||||||||||||| ||||||||  |||  ||||||||| ||| | |||||  ||||||||||||||    
T  30444818 tatcagcgtcatcaactccacctcaagctgacctttctctacctcaagttccaaatatgtatatccactatgactttcaccttgaaactccacctcaaag 30444719  T
Q  592 gttgatcacgagtat 606  Q
     ||||||| ||||||    
T  30444718 attgatcatgagtat 30444704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 180 - 344
Target Start/End: Complemental strand, 16568632 - 16568485
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttcccttgcatccaactctacaccaagttgctcc 279  Q
    |||||||| |||||| |||||||| ||||||||||||||||||||| |||||||||||||        |||||||||||||  ||||||||||| |||||    
T  16568632 atttctccgccttgacttctaatt-ggtgatgatgccactttaaccgtcaaccaccaatc-------ccccttgcatccaa--ctacaccaagtagctcc 16568543  T
Q  280 acaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatca 344  Q
    |||||       | | ||||||||| ||||||||||||||||||||||||| |||| ||||||||    
T  16568542 acaag-------tatacaccaaaccctcttcaaccacggaacgtctcccgcttccttgaagatca 16568485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 476 - 606
Target Start/End: Complemental strand, 11137619 - 11137488
Alignment:
Q  476 ctccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatg-cttccgcctt 574  Q
    |||||| | |||||||||||||  |||| |||||||||| |||| |||| ||||||||||| ||||  |||| | |||| ||||||||| ||| | ||||    
T  11137619 ctccatcgtcgtaccattcccgatgtcatcaactccaccacaagctgagttttctctacctgaactagcaaacgcgtacatccactatgactttcacctt 11137520  T
Q  575 gccactccacctcaaaggttgatcacgagtat 606  Q
    |  ||||||||||||||||||| || ||||||    
T  11137519 gaaactccacctcaaaggttgaacatgagtat 11137488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 27648167 - 27648002
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaac 99  Q
    |||||||||||||| |||||||  | | | |||||||| || ||||||| ||||||||||||| ||||||||||||||||| |||||  |      | ||    
T  27648167 gagtggtaaccaccgaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgagaaactca------atac 27648075  T
Q  100 acaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttga 175  Q
    |||||||| ||   |||||||||||| |||||||| || ||| ||||||||| ||||||||||||||||||||||||    
T  27648074 acaagataaaa---ggagagggaagaagaaaacaa-aagcaccaagagattgttcacccagttcggtccaaacttga 27648002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 48 - 179
Target Start/End: Complemental strand, 412369 - 412240
Alignment:
Q  48 aacaccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaacacaagatagaacaaggagagggaagatgaaaacaa-taaacacaagag 146  Q
    |||| |||||||||| |||||||| ||||||||  ||||| |  |  ||| ||||||||| ||   |||||||||||| |||||||| || ||  |||||    
T  412369 aacagcacctagatctaatctaggtaacaagtgaaaaacacaatacacaagcacaagataaaa---ggagagggaagaagaaaacaaatacaccaaagag 412273  T
Q  147 attggtcacccagttcggtccaaacttgaccta 179  Q
    |||| ||||||||||||||||||||||||||||    
T  412272 attgttcacccagttcggtccaaacttgaccta 412240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 540 - 606
Target Start/End: Original strand, 5407076 - 5407142
Alignment:
Q  540 cttccaaatgagtacttccactatgcttccgccttgccactccacctcaaaggttgatcacgagtat 606  Q
    |||||||||||||||   |||||||||||| |||||  |||||||||||||||||||||||||||||    
T  5407076 cttccaaatgagtacacacactatgcttccaccttgtaactccacctcaaaggttgatcacgagtat 5407142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 540 - 606
Target Start/End: Original strand, 5411401 - 5411467
Alignment:
Q  540 cttccaaatgagtacttccactatgcttccgccttgccactccacctcaaaggttgatcacgagtat 606  Q
    |||||||||||||||   |||||||||||| |||||  |||||||||||||||||||||||||||||    
T  5411401 cttccaaatgagtacacacactatgcttccaccttgtaactccacctcaaaggttgatcacgagtat 5411467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 507 - 565
Target Start/End: Complemental strand, 22615155 - 22615097
Alignment:
Q  507 actccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgc 565  Q
    ||||||||||||||||||||||| |||||||| |||||||||| |||| ||||||||||    
T  22615155 actccacctcaagttgagctttcactacctcaccttccaaatgcgtacatccactatgc 22615097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 6136155 - 6136216
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaac-aaacaccacctagat 61  Q
    ||||||||||||||||||||||  ||||| |||||||||||||||| |||||||||||||||    
T  6136155 gagtggtaaccaccaaacaaagtgtattgtgcaagcaagaaacaacaaaacaccacctagat 6136216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 3072722 - 3072789
Alignment:
Q  112 aaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||||||||| |||||||| | |||| ||||||||| ||||||||||||||||||||||||||||    
T  3072722 aaggagagggaagaggaaaacaa-agacaccaagagattgttcacccagttcggtccaaacttgaccta 3072789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 6097411 - 6097481
Alignment:
Q  110 acaaggagagggaagatgaaaacaataaacac--aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||||||||||| |||||||| | ||||  ||||||||| ||||||||||||||||||||||||||||    
T  6097411 acaaggagagggaagaggaaaacaa-agacaccaaagagattgttcacccagttcggtccaaacttgaccta 6097481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 11857567 - 11857623
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| ||||||||||||| ||||| || ||||||||||||||||||    
T  11857567 atttctccaccttgacttctaatttggtggtgatgtcagtttaaccatcaaccacca 11857623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 14741926 - 14741870
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| ||||||||||||| ||||| || ||||||||||||||||||    
T  14741926 atttctccaccttgacttctaatttggtggtgatgtcagtttaaccatcaaccacca 14741870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 33335429 - 33335373
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| ||||||||||||| ||||| || | ||||||||||||||||    
T  33335429 atttctccaccttgacttctaatttggtggtgatgtcaatataaccatcaaccacca 33335373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 395 - 541
Target Start/End: Original strand, 15533622 - 15533768
Alignment:
Q  395 atacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaag-cctccatagccgtaccatt 493  Q
    ||||||||||||| |   ||||| || ||| || ||||||||||  | | |||||||||||||||||||| | | ||| | ||||||||| |||||||||    
T  15533622 atacattcttcaacctttggaatgccttccgtcttcatgaagaaatcccgtgctcaccactagagcataa-cactcaaggtcctccatagtcgtaccatt 15533720  T
Q  494 cccggagtcaccaactccacctcaagttgagctttctctacctcaact 541  Q
     |||| ||   ||||||||||||||| ||||| | |||||||||||||    
T  15533721 accggtgtgttcaactccacctcaagctgagcgtactctacctcaact 15533768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Original strand, 2171524 - 2171562
Alignment:
Q  141 caagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  2171524 caagagattgttcacccagttcggtccaaacttgaccta 2171562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 294 - 367
Target Start/End: Complemental strand, 33310567 - 33310495
Alignment:
Q  294 ttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggc 367  Q
    ||||||| ||||||||||||  | |||| ||||| || |||| |||||||||||||||||| ||||||||||||    
T  33310567 ttcaccataccatcttcaacg-cagaacatctcctgcttccttgaagatcaccttgcatccaatcacccttggc 33310495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 13159087 - 13159051
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagca 37  Q
    |||||||||||||| ||||||||||||||||||||||    
T  13159087 gagtggtaaccacctaacaaagcttattgagcaagca 13159051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 585
Target Start/End: Original strand, 10456365 - 10456444
Alignment:
Q  507 actccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatg-cttccgccttgccactccacc 585  Q
    |||||||||||||| ||||||| | |||||||||||||||||  |||  |||| |||| ||||| |||||| ||||||||    
T  10456365 actccacctcaagtagagctttttgtacctcaacttccaaatacgtaaatccaatatgtcttccaccttgcaactccacc 10456444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 606
Target Start/End: Complemental strand, 17758758 - 17758659
Alignment:
Q  507 actccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccactccacctcaaaggttgatcacgagtat 606  Q
    ||||||||||||| | || |||||| |||||||| || ||| | ||||   |||||||  | | |||||| |||||||||| ||||||||||||||||||    
T  17758758 actccacctcaagctaagatttctccacctcaacatctaaacgcgtacacacactatgtctacaccttgcaactccacctctaaggttgatcacgagtat 17758659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 179
Target Start/End: Original strand, 16452325 - 16452359
Alignment:
Q  145 agattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||| ||||||||||||||||||||||||||||    
T  16452325 agattgttcacccagttcggtccaaacttgaccta 16452359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 476 - 530
Target Start/End: Original strand, 24543546 - 24543600
Alignment:
Q  476 ctccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttct 530  Q
    ||||||||  |||||||| || | |||| ||||||||||||||||||||||||||    
T  24543546 ctccatagttgtaccatttccagtgtcatcaactccacctcaagttgagctttct 24543600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 346 - 463
Target Start/End: Original strand, 28038602 - 28038720
Alignment:
Q  346 cttgcatccgatcacccttggccttttaggc-aatcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccaca 444  Q
    |||||||||  |||||||||| | ||||||  |||| |||||| ||  | ||||||||||||| | ||||||| || ||| || ||||||||||||| |     
T  28038602 cttgcatccattcacccttggtcgtttagggtaatcccacaagtcatgctatacattcttcaacctccggaatgccttccgtcttcatgaagaatcccct 28038701  T
Q  445 tgctcaccactagagcata 463  Q
    | |||||||||||| ||||    
T  28038702 tcctcaccactagaccata 28038720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 554
Target Start/End: Original strand, 3631038 - 3631087
Alignment:
Q  505 caactccacctcaagttgagctttctctacctcaacttccaaatgagtac 554  Q
    ||||||||||||||||||||| | |||||||||||||  |||||| ||||    
T  3631038 caactccacctcaagttgagcgtactctacctcaactagcaaatgcgtac 3631087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 365
Target Start/End: Original strand, 30729571 - 30729616
Alignment:
Q  320 acgtctcccgcctcctcgaagatcaccttgcatccgatcacccttg 365  Q
    ||||||||||| |||| |||||| ||||||||||| ||||||||||    
T  30729571 acgtctcccgcttccttgaagattaccttgcatccaatcacccttg 30729616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 411; Significance: 0; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 411; E-Value: 0
Query Start/End: Original strand, 180 - 606
Target Start/End: Complemental strand, 10058027 - 10057601
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttcccttgcatccaactctacaccaagttgctcc 279  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10058027 atttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttcccttgcatccaactctacaccaagttgctcc 10057928  T
Q  280 acaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaat 379  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10057927 acaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaat 10057828  T
Q  380 cacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctcc 479  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10057827 cacacaagccaccccatacattcttcaaaccccggaataccatccgtcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctcc 10057728  T
Q  480 atagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccac 579  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10057727 atagccgtaccatttccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccac 10057628  T
Q  580 tccacctcaaaggttgatcacgagtat 606  Q
    |||||||||||||||||||||||||||    
T  10057627 tccacctcaaaggttgatcacgagtat 10057601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 411; E-Value: 0
Query Start/End: Original strand, 180 - 606
Target Start/End: Complemental strand, 10060249 - 10059823
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttcccttgcatccaactctacaccaagttgctcc 279  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10060249 atttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttcccttgcatccaactctacaccaagttgctcc 10060150  T
Q  280 acaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaat 379  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10060149 acaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaat 10060050  T
Q  380 cacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctcc 479  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10060049 cacacaagccaccccatacattcttcaaaccccggaataccatccgtcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctcc 10059950  T
Q  480 atagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccac 579  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10059949 atagccgtaccatttccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccac 10059850  T
Q  580 tccacctcaaaggttgatcacgagtat 606  Q
    |||||||||||||||||||||||||||    
T  10059849 tccacctcaaaggttgatcacgagtat 10059823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 411; E-Value: 0
Query Start/End: Original strand, 180 - 606
Target Start/End: Complemental strand, 10062471 - 10062045
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttcccttgcatccaactctacaccaagttgctcc 279  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10062471 atttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttcccttgcatccaactctacaccaagttgctcc 10062372  T
Q  280 acaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaat 379  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10062371 acaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaat 10062272  T
Q  380 cacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctcc 479  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10062271 cacacaagccaccccatacattcttcaaaccccggaataccatccgtcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctcc 10062172  T
Q  480 atagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccac 579  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10062171 atagccgtaccatttccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccac 10062072  T
Q  580 tccacctcaaaggttgatcacgagtat 606  Q
    |||||||||||||||||||||||||||    
T  10062071 tccacctcaaaggttgatcacgagtat 10062045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 411; E-Value: 0
Query Start/End: Original strand, 180 - 606
Target Start/End: Complemental strand, 10064693 - 10064267
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttcccttgcatccaactctacaccaagttgctcc 279  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10064693 atttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttcccttgcatccaactctacaccaagttgctcc 10064594  T
Q  280 acaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaat 379  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10064593 acaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaat 10064494  T
Q  380 cacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctcc 479  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10064493 cacacaagccaccccatacattcttcaaaccccggaataccatccgtcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctcc 10064394  T
Q  480 atagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccac 579  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10064393 atagccgtaccatttccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccac 10064294  T
Q  580 tccacctcaaaggttgatcacgagtat 606  Q
    |||||||||||||||||||||||||||    
T  10064293 tccacctcaaaggttgatcacgagtat 10064267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 411; E-Value: 0
Query Start/End: Original strand, 180 - 606
Target Start/End: Complemental strand, 10066915 - 10066489
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttcccttgcatccaactctacaccaagttgctcc 279  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10066915 atttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttcccttgcatccaactctacaccaagttgctcc 10066816  T
Q  280 acaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaat 379  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10066815 acaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaat 10066716  T
Q  380 cacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctcc 479  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10066715 cacacaagccaccccatacattcttcaaaccccggaataccatccgtcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctcc 10066616  T
Q  480 atagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccac 579  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10066615 atagccgtaccatttccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccac 10066516  T
Q  580 tccacctcaaaggttgatcacgagtat 606  Q
    |||||||||||||||||||||||||||    
T  10066515 tccacctcaaaggttgatcacgagtat 10066489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 380; E-Value: 0
Query Start/End: Original strand, 180 - 606
Target Start/End: Original strand, 4599107 - 4599531
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttcccttgcatccaactctacaccaagttgctcc 279  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||   | | |||||||||||||||||||||||||||||||||||||    
T  4599107 atttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccc--ccttcttttcccttgcatccaactctacaccaagttgctcc 4599204  T
Q  280 acaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaat 379  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4599205 acaagtcttcctttttcaccaaaccatcttcaaccacagaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaat 4599304  T
Q  380 cacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctcc 479  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  4599305 cacacaagccaccccatacattcttcaaaccccggaataccatccgtcctcatgaagaattcacatgctcaccactagagcataaactcccaaagcctcc 4599404  T
Q  480 atagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccac 579  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4599405 atagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccac 4599504  T
Q  580 tccacctcaaaggttgatcacgagtat 606  Q
    |||||||||||||||||||||||||||    
T  4599505 tccacctcaaaggttgatcacgagtat 4599531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 376; E-Value: 0
Query Start/End: Original strand, 180 - 606
Target Start/End: Complemental strand, 10210978 - 10210554
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttcccttgcatccaactctacaccaagttgctcc 279  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||   | | |||||||||||||||||||||||||||||||||||||    
T  10210978 atttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccc--ccttcttttcccttgcatccaactctacaccaagttgctcc 10210881  T
Q  280 acaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaat 379  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10210880 acaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctccttgaagatcaccttgcatccgatcacccttggccttttaggcaat 10210781  T
Q  380 cacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctcc 479  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10210780 cacacaagccactccatacattcttcaaaccccggaataccatctgtcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctcc 10210681  T
Q  480 atagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccac 579  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10210680 atagccgtaccattcttggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgggtacttccactatgcttccgccttgccac 10210581  T
Q  580 tccacctcaaaggttgatcacgagtat 606  Q
    |||||||||||||||||||||||||||    
T  10210580 tccacctcaaaggttgatcacgagtat 10210554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 180 - 606
Target Start/End: Complemental strand, 6718288 - 6717865
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatct-----tccttttcccttgcatccaactctacaccaagtt 274  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||     | ||||||||||||||||||||||||  ||||||    
T  6718288 atttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccaatctcaccattcttttcccttgcatccaactctac--caagtt 6718191  T
Q  275 gctccacaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttag 374  Q
    ||||||||||||||||       |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  6718190 gctccacaagtcttca-------ccaagccatcttcaaccacgaaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggtcttttag 6718098  T
Q  375 gcaatcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaag 474  Q
    | ||||||||||||||| ||||||||||||||||||| ||||||||  || |||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  6718097 gtaatcacacaagccaccccatacattcttcaaaccctggaatacctcccgtcctcatgaagaattcacatgctcacaactagagcataaactcccaaag 6717998  T
Q  475 cctccatagccgtaccatt-cccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgcct 573  Q
    ||||||||| | ||||||| ||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |    
T  6717997 cctccatagtcataccattccccggtgtcatcaactccacctcaagttgaactttctctacctcaacttccaaatgagtacttccactatgcttccactt 6717898  T
Q  574 tgccactccacctcaaaggttgatcacgagtat 606  Q
    ||| |||||||||||||||||||||||||||||    
T  6717897 tgcaactccacctcaaaggttgatcacgagtat 6717865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 182 - 606
Target Start/End: Original strand, 5258717 - 5259136
Alignment:
Q  182 ttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttc-----ccttgcatccaactctacaccaagttgc 276  Q
    ||||||||||||| ||| |||| | |||||||| ||||||||||||||||||||||||| |||||||     ||||| || ||||| |||  ||||||||    
T  5258717 ttctccaccttgacttcaaatt-gatgatgatgtcactttaaccatcaaccaccaatctcccttttcttttcccttgaattcaactatac--caagttgc 5258813  T
Q  277 tccacaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggc 376  Q
    ||||||||||| |||       |||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||     
T  5258814 tccacaagtctacat-------caaaccctcttcaaccacgaaacgtctcccgcttcctcgaagatcaccttgcatccgatcacccttggtcttttaggt 5258906  T
Q  377 aatcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcc 476  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||||||||||||| |||||||||    
T  5258907 aatcacacaagccacaccatacattcttcaaaccccggaataccttccgtcctcatgaagaattcacatgctcacaactagagcataaacacccaaagcc 5259006  T
Q  477 tccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgc 576  Q
    ||||||| |||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||     
T  5259007 tccatagtcgtaccattcccggtgtcatcaactccaccttaagttgagctttctctacctcaacttccaaatgagtatttccactatgcttccaccttgt 5259106  T
Q  577 cactccacctcaaaggttgatcacgagtat 606  Q
     |||||||||||| ||||||||||||||||    
T  5259107 aactccacctcaagggttgatcacgagtat 5259136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 180 - 606
Target Start/End: Original strand, 23198530 - 23198952
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttt-----tcccttgcatccaactctacaccaagtt 274  Q
    ||||||||||||||| |||||||||| || ||||| || |||||||||||||||||||||| |||||     |||||||||| ||||| |||  ||||||    
T  23198530 atttctccaccttgacttctaatttgttggtgatgtcaatttaaccatcaaccaccaatctccctttgcttttcccttgcattcaactatac--caagtt 23198627  T
Q  275 gctccacaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttag 374  Q
    | ||||||||||| ||       |||||||||||||||||||||||||||| | || |||||||||||||||||| |||||||||||||||| |||||||    
T  23198628 gttccacaagtctaca-------ccaaaccatcttcaaccacggaacgtcttctgcttcctcgaagatcaccttgtatccgatcacccttggtcttttag 23198720  T
Q  375 gcaatcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaag 474  Q
    | ||||||||||||||| ||||||||||||||||||||||||| || ||| |||||||||||||| ||||||||||| |||||||||||||| |||||||    
T  23198721 gtaatcacacaagccacaccatacattcttcaaaccccggaatgccttccgtcctcatgaagaattcacatgctcacaactagagcataaacacccaaag 23198820  T
Q  475 cctccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgcctt 574  Q
    ||||||||| | |||||||||||  |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23198821 cctccatagtcataccattcccgatgtcatcaactccaccttaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccacctt 23198920  T
Q  575 gccactccacctcaaaggttgatcacgagtat 606  Q
     |||||||||||||||||||||||| ||||||    
T  23198921 accactccacctcaaaggttgatcatgagtat 23198952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 182 - 577
Target Start/End: Original strand, 9634892 - 9635283
Alignment:
Q  182 ttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttcc-----cttgcatccaactctacaccaagttgc 276  Q
    ||||||||||||| ||| || | | |||||||| ||||||||||||||||||||||||| |||||||      |||||| ||||||  ||||||||||||    
T  9634892 ttctccaccttgacttcaaact-gatgatgatgtcactttaaccatcaaccaccaatctcccttttcttttcacttgcacccaact--acaccaagttgc 9634988  T
Q  277 tccacaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcaccc-ttggccttttagg 375  Q
    ||||||||||| ||       ||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||    
T  9634989 tccacaagtctaca-------ccaaatcctcttcaaccacggaacgtctcccgcttcctcgaagatcaccttgcatccgatcaccccttggtcttttagg 9635081  T
Q  376 caatcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagc 475  Q
     |||||||||||| ||  |||||||||||||||||||||||| || |||||||||||||||||| ||||||||||| ||||||||||||||  |||| ||    
T  9635082 taatcacacaagctacatcatacattcttcaaaccccggaatgccttccatcctcatgaagaattcacatgctcacaactagagcataaacaaccaaggc 9635181  T
Q  476 ctccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttg 575  Q
    |||||||| |||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9635182 ctccatagtcgtaccattcccggtgtcatcaactccaccttaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccaccttg 9635281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 180 - 605
Target Start/End: Complemental strand, 29812641 - 29812225
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatc---ttccttttcccttgcatccaactctacaccaagttgc 276  Q
    ||||||||||||||| ||| |||| | |||||||| ||||||||||||||||||||||||   || ||||||| ||||||||||||  ||||||||| ||    
T  29812641 atttctccaccttgacttcaaatt-gatgatgatgtcactttaaccatcaaccaccaatcccttttcttttcc-ttgcatccaact--acaccaagtagc 29812546  T
Q  277 tccacaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggc 376  Q
    ||||||||||| ||       ||||||| ||||||||| |||||| |||||||| |||| |||||||||||||||||||||||| ||||| ||||||||     
T  29812545 tccacaagtctaca-------ccaaaccctcttcaaccccggaacatctcccgcttccttgaagatcaccttgcatccgatcacgcttggtcttttaggt 29812453  T
Q  377 aatcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcc 476  Q
    || ||||||||| || |||||||||||||||||||| |||| || ||| | |||||||||||| |||| |||||| |||||||||| | | | ||| ||     
T  29812452 aaccacacaagctacaccatacattcttcaaaccccagaatgccttccgttctcatgaagaattcacaagctcacaactagagcat-agcactcaaggca 29812354  T
Q  477 tccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgc 576  Q
    |||||||  ||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||   |||||||| | | ||||||    
T  29812353 tccatagttgtaccattcccggtgtcatcaactccaccttaagttgagctttctctacctcaacttccaaatgcgtacacacactatgccttcaccttgc 29812254  T
Q  577 cactccacctcaaaggttgatcacgagta 605  Q
     ||||||||||||||||||||||||||||    
T  29812253 aactccacctcaaaggttgatcacgagta 29812225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 185 - 606
Target Start/End: Complemental strand, 7764026 - 7763624
Alignment:
Q  185 tccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttc------ccttgcatccaactctacaccaagttgctc 278  Q
    |||||||||| ||| |||| | |||||||||||||||||||||||||||||||||| |||||||      ||||||||||||||  ||||||||||||||    
T  7764026 tccaccttgacttcaaatt-gatgatgatgccactttaaccatcaaccaccaatctcccttttctttttcccttgcatccaact--acaccaagttgctc 7763930  T
Q  279 cacaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaa 378  Q
    ||||||||| ||       ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||              || ||    
T  7763929 cacaagtctaca-------ccaaaccatcttcaaccacggaacgtctcccgcttcctcgaagatcaccttgcatccaatca--------------ggtaa 7763851  T
Q  379 tcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctc 478  Q
    || ||||||| ||  ||||||||||||||||||| ||||  | ||| |||||||||||||| || ||||||||  ||||||||||||| ||||| |||||    
T  7763850 tcgcacaagcaacgtcatacattcttcaaaccccagaatgtcttccgtcctcatgaagaattcatatgctcacacctagagcataaacacccaaggcctc 7763751  T
Q  479 catagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgcca 578  Q
    ||||| |||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||      
T  7763750 catagtcgtaccattctcggtgtcacaaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgccttcaccttgcag 7763651  T
Q  579 ctccacctcaaaggttgatcacgagtat 606  Q
    ||||||||| ||||||||||||||||||    
T  7763650 ctccacctc-aaggttgatcacgagtat 7763624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 10056535 - 10056357
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaacaccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaaca 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10056535 gagtggtaaccaccaaaccaagcttattgagcaagcaagaaacaacaaacaccacctagatccaatctaggaaacaagtgtgaaacaaagcaactaaaca 10056436  T
Q  101 caagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    ||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10056435 caagata-aacaaggagagggaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgaccta 10056357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 10058757 - 10058579
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaacaccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaaca 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10058757 gagtggtaaccaccaaaccaagcttattgagcaagcaagaaacaacaaacaccacctagatccaatctaggaaacaagtgtgaaacaaagcaactaaaca 10058658  T
Q  101 caagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    ||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10058657 caagata-aacaaggagagggaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgaccta 10058579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 10060979 - 10060801
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaacaccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaaca 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10060979 gagtggtaaccaccaaaccaagcttattgagcaagcaagaaacaacaaacaccacctagatccaatctaggaaacaagtgtgaaacaaagcaactaaaca 10060880  T
Q  101 caagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    ||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10060879 caagata-aacaaggagagggaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgaccta 10060801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 10063201 - 10063023
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaacaccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaaca 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10063201 gagtggtaaccaccaaaccaagcttattgagcaagcaagaaacaacaaacaccacctagatccaatctaggaaacaagtgtgaaacaaagcaactaaaca 10063102  T
Q  101 caagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    ||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10063101 caagata-aacaaggagagggaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgaccta 10063023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 10065423 - 10065245
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaacaccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaaca 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10065423 gagtggtaaccaccaaaccaagcttattgagcaagcaagaaacaacaaacaccacctagatccaatctaggaaacaagtgtgaaacaaagcaactaaaca 10065324  T
Q  101 caagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    ||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10065323 caagata-aacaaggagagggaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgaccta 10065245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 10067622 - 10067444
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaacaccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaaca 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10067622 gagtggtaaccaccaaaccaagcttattgagcaagcaagaaacaacaaacaccacctagatccaatctaggaaacaagtgtgaaacaaagcaactaaaca 10067523  T
Q  101 caagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    ||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10067522 caagata-aacaaggagagggaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgaccta 10067444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 10211711 - 10211533
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaac 99  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  10211711 gagtggtaaccaccaatcaaagcttattgagcaagcaagaaacaacaaaacaccacctagatccaatctaggaaacaagtgtgaaacaaagcaa-caatc 10211613  T
Q  100 acaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10211612 acaagata-aacaaggagagggaagatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgaccta 10211533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 4598375 - 4598553
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaac 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  4598375 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaataaaacaccacctagatccaatctaggaaacaagtgtgaaacaaagcaa-caatc 4598473  T
Q  100 acaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4598474 acaagata-aacaaggagagggaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgaccta 4598553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 10209491 - 10209313
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaac 99  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  10209491 gagtggtaaccaccaatcaaagcttattgagcaagcaagaaacaacaaaacaccacctagatccaatctaggaaacaagtgtgaaacaaagcaa-caatc 10209393  T
Q  100 acaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  10209392 acaagata-aacaaggagagggaagatgaaaacaataaacacaaagagattggtcacccagtttggtccaaacttgaccta 10209313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 4600596 - 4600774
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaac-aaacaccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaac 99  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||| |    
T  4600596 gagtggtaaccaccaaacaaagcttattgagcaagccagaaacaacaaaacaccacctagatccaatctaggaaacaagtgtgaaacaaatcaa-caatc 4600694  T
Q  100 acaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4600695 acaagata-aacaaggagagggaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgaccta 4600774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 180 - 420
Target Start/End: Complemental strand, 37408036 - 37407799
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatct-------tccttttcccttgcatccaactctacaccaag 272  Q
    ||||||||||||||| ||| |||| | ||||||||||||||||||||||| ||| ||||||       || |||||||||||||||||||  |||||||     
T  37408036 atttctccaccttgacttcaaatt-gatgatgatgccactttaaccatcagccatcaatctcctcttttctttttcccttgcatccaact--acaccaaa 37407940  T
Q  273 ttgctccacaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctttt 372  Q
    ||| ||||||||||| ||       ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||    
T  37407939 ttgttccacaagtctaca-------ccaaaccatcttcaaccacggaacgtctcccgcttccttgaagatcaccttgcatccgatcacccttggtctttt 37407847  T
Q  373 aggcaatcacacaagccactccatacattcttcaaaccccggaatacc 420  Q
    ||| ||||||||||| ||| ||||||||||||||||| || |||||||    
T  37407846 aggtaatcacacaagtcacaccatacattcttcaaactccagaatacc 37407799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 3617766 - 3617588
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaa--acaaagcaaccaa 97  Q
    |||||||||||||| ||||||| |||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||  ||||||||| |||    
T  3617766 gagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagcaa-caa 3617668  T
Q  98 acacaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
     ||||||||   |||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  3617667 tcacaagat---acaaggagagggaagaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgaccta 3617588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 25637746 - 25637565
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaaaca--aagcaaccaa 97  Q
    |||||||||||||| |||||||  ||||| ||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||  |||||| |||    
T  25637746 gagtggtaaccacctaacaaagtgtattgtgcaagcaggaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagcaaacaa 25637647  T
Q  98 acacaagatagaacaaggagagggaagatgaaaacaataaacac--aagagattggtcacccagttcggtccaaacttgaccta 179  Q
     ||||||||| ||||||||||||||||| |||||||| || |||  ||||||||||||||||||||||||||||||||||||||    
T  25637646 tcacaagata-aacaaggagagggaagaagaaaacaa-aagcaccaaagagattggtcacccagttcggtccaaacttgaccta 25637565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 299 - 604
Target Start/End: Original strand, 15824365 - 15824667
Alignment:
Q  299 caaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaatcacacaagccactccatac 398  Q
    |||||| ||||||||||||||||||||||||| |||| ||| |||||||||||||| |||||||||||  ||||||| ||||||||||| ||  | ||||    
T  15824365 caaaccctcttcaaccacggaacgtctcccgcttccttgaatatcaccttgcatccaatcacccttggtgttttaggtaatcacacaagtcatgctatac 15824464  T
Q  399 attcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctccatagccgtaccattcccgg 498  Q
    |||||||||||| | ||||  | ||| ||||| |||||||| ||| ||||| | |||||||||| ||| || || | ||  ||||  ||||||| |||||    
T  15824465 attcttcaaacctcagaatgacttccgtcctcttgaagaattcacttgctcgcaactagagcat-aacacctaaggtcttaatagttgtaccatgcccgg 15824563  T
Q  499 agtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatg-cttccgccttgccactccacctcaaaggttgat 597  Q
     |||| ||||||||   |||| |||| |||||||||||||||    || ||||||||||| |||||  ||   |||||| ||||||||||||||||||||    
T  15824564 tgtcatcaactcca---caagatgagatttctctacctcaacaggaaattgagtacttcctctatgtgtttaaccttgcaactccacctcaaaggttgat 15824660  T
Q  598 cacgagt 604  Q
    |||||||    
T  15824661 cacgagt 15824667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 5 - 179
Target Start/End: Complemental strand, 45283297 - 45283124
Alignment:
Q  5 ggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaacacaa 103  Q
    ||||||||||||||||||  | ||| |||||||| || ||||||| ||||||||||||| |||||||||||| |||| |||||| |  |  ||| |||||    
T  45283297 ggtaaccaccaaacaaagtgt-ttgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaactagtgagaaacacaatacacaatcacaa 45283199  T
Q  104 gatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||| ||||||||||||||||| |||||||| || ||| ||||||||| |||| |||||||||||||||||||||||    
T  45283198 gata-aacaaggagagggaagaagaaaacaa-aagcaccaagagattgttcactcagttcggtccaaacttgaccta 45283124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 476 - 606
Target Start/End: Complemental strand, 32892573 - 32892443
Alignment:
Q  476 ctccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttg 575  Q
    ||||||||  ||||||||  ||| ||||| ||||||||||||||||||||||||||| ||||||||| |||||| ||||   ||| |||||| | |||||    
T  32892573 ctccatagttgtaccattttcggtgtcactaactccacctcaagttgagctttctctgcctcaactttcaaatgcgtacacacaccatgctttcaccttg 32892474  T
Q  576 ccactccacctcaaaggttgatcacgagtat 606  Q
    | ||||||||||||||||||||||| |||||    
T  32892473 caactccacctcaaaggttgatcacaagtat 32892443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 54635438 - 54635262
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaac 99  Q
    ||||||||||||||||||||||  | | | |||||||| || ||||||| ||||||||||||| ||||||||||||||||| |||||| |  |  ||| |    
T  54635438 gagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgagaaacacaatacacaatc 54635340  T
Q  100 acaagatagaacaaggagagggaagatgaaaacaataaacac--aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||| ||   |||||||||||| |||||||| || |||  ||||||||| ||||||||||||||||||||||||||||    
T  54635339 acaagataaaa---ggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgaccta 54635262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 382 - 483
Target Start/End: Original strand, 43403017 - 43403118
Alignment:
Q  382 cacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctccat 481  Q
    |||||||||  ||| ||||||||||| ||||||||| || ||| |||||||||||||| ||||||||| | |||||||||||||| ||||||||||||||    
T  43403017 cacaagccatgccaaacattcttcaacccccggaatgccttccgtcctcatgaagaattcacatgctcgctactagagcataaacacccaaagcctccat 43403116  T
Q  482 ag 483  Q
    ||    
T  43403117 ag 43403118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 5 - 179
Target Start/End: Complemental strand, 6716811 - 6716637
Alignment:
Q  5 ggtaaccaccaaacaaagcttattgagcaagcaagaaacaac--aaacaccacctagatccaatctaggaaacaagtgtgaaac-aaagcaaccaaacac 101  Q
    ||||||||||||||||||  | | | |||||||| || ||||  |||||||||||||||| |||||||||||||||||||||||  ||  |  ||| |||    
T  6716811 ggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaaccaaaacaccacctagatctaatctaggaaacaagtgtgaaactcaaaaatacaatcac 6716713  T
Q  102 aagatagaacaaggagagggaagatgaaaacaataaacac--aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||   | |||| ||||||||| |||||||| || |||  ||||||||| ||||||||||||||||||||||||||||    
T  6716712 aagat---aaaaggggagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgaccta 6716637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 507 - 606
Target Start/End: Original strand, 43403172 - 43403271
Alignment:
Q  507 actccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccactccacctcaaaggttgatcacgagtat 606  Q
    ||||||||||||| |||| |||||| ||||||||||||||| | ||||   |||||||| | | |||||| ||| |||||||||||||||||||||||||    
T  43403172 actccacctcaagctgagatttctccacctcaacttccaaacgcgtacacacactatgccttcaccttgcaacttcacctcaaaggttgatcacgagtat 43403271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 285
Target Start/End: Complemental strand, 40735005 - 40734901
Alignment:
Q  182 ttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttc----ccttgcatccaactctacaccaagttgct 277  Q
    ||||||||||||| ||| |||| | |||||||||||||||||||||||| |||||||| || |||||    ||||||||||||  ||||||||||| |||    
T  40735005 ttctccaccttgacttcaaatt-gatgatgatgccactttaaccatcaatcaccaatcctctttttcttttccttgcatccaa--ctacaccaagtagct 40734909  T
Q  278 ccacaagt 285  Q
    ||||||||    
T  40734908 ccacaagt 40734901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 285
Target Start/End: Complemental strand, 44331146 - 44331042
Alignment:
Q  182 ttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatc----ttccttttcccttgcatccaactctacaccaagttgct 277  Q
    ||||||||||||| ||| |||| | |||||||| ||||||||||||||||||||||||    || ||||||||||| ||||||  ||||||||||| |||    
T  44331146 ttctccaccttgacttcaaatt-gatgatgatgtcactttaaccatcaaccaccaatctccttttcttttcccttgtatccaa--ctacaccaagtagct 44331050  T
Q  278 ccacaagt 285  Q
    ||||||||    
T  44331049 ccacaagt 44331042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 801297 - 801230
Alignment:
Q  112 aaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||||||||| |||||||| | |||| ||||||||| ||||||||||||||||||||||||||||    
T  801297 aaggagagggaagaagaaaacaa-agacaccaagagattgttcacccagttcggtccaaacttgaccta 801230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 1306604 - 1306660
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| ||||||||||||| ||||| || ||||||||||||||||||    
T  1306604 atttctccaccttgacttctaatttggtggtgatgtcaatttaaccatcaaccacca 1306660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 2676574 - 2676518
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| ||||||||||||| ||||| || ||||||||||||||||||    
T  2676574 atttctccaccttgacttctaatttggtggtgatgtcaatttaaccatcaaccacca 2676518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 3327842 - 3327786
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| ||||||||||||| ||||| || ||||||||||||||||||    
T  3327842 atttctccaccttgacttctaatttggtggtgatgtcagtttaaccatcaaccacca 3327786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 6794220 - 6794164
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| ||||||| ||||||||||| || ||||||||||||||||||    
T  6794220 atttctccaccttgacttctaatgtggtgatgatgtcagtttaaccatcaaccacca 6794164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 8512827 - 8512883
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| ||||||||||||| ||||| || ||||||||||||||||||    
T  8512827 atttctccaccttgacttctaatttggtggtgatgtcaatttaaccatcaaccacca 8512883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 28503319 - 28503263
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| ||||||||||||| ||||| || ||||||||||||||||||    
T  28503319 atttctccaccttgacttctaatttggtggtgatgtcagtttaaccatcaaccacca 28503263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 32476072 - 32476128
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| ||||||||||||| ||||| || ||||||||||||||||||    
T  32476072 atttctccaccttgacttctaatttggtggtgatgtcaatttaaccatcaaccacca 32476128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 23200102 - 23200168
Alignment:
Q  112 aaggagagggaagatgaaaacaataaacacaagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||||||||| |||||||| | |||| | |||||| ||||||||||||||||||||||||||||    
T  23200102 aaggagagggaagaagaaaacaa-agacaccaaagattgttcacccagttcggtccaaacttgaccta 23200168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 323 - 606
Target Start/End: Original strand, 53916584 - 53916873
Alignment:
Q  323 tctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctttt---aggc-aatcacacaagccactccatacattcttcaaaccccggaata 418  Q
    |||||||| |||| |||||| ||||||||||| |||||| ||||||||||   |||  |||| | |||| |   | ||||||||||||| | |||||||     
T  53916584 tctcccgcttccttgaagattaccttgcatccaatcaccgttggcctttttttaggataatcccgcaagtcgtgctatacattcttcaacctccggaatg 53916683  T
Q  419 ccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaag-cctccatagccgtaccattcccggagtcaccaactccacctca 517  Q
     | |||||| ||||||||||  | | ||||||||| |||||||||  | ||||| | ||||||||||||||||||| |||  ||   |||||||||||||    
T  53916684 tcttccatcttcatgaagaaatcccttgctcacca-tagagcatag-cacccaaggtcctccatagccgtaccattaccgatgtgttcaactccacctca 53916781  T
Q  518 agttgagctttctctacctcaacttccaaatgagtacttc-cactatg-cttccgccttgccactccacctcaa-aggttgatcacgagtat 606  Q
     | ||||| | ||||| |||||||  |||||| |||| || ||||||| ||||| |||||  |||||||||||| |||| ||||| ||||||    
T  53916782 cgctgagcgtactctaactcaactagcaaatgcgtacatctcactatgtcttccaccttgaaactccacctcaacaggtagatcatgagtat 53916873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 508 - 606
Target Start/End: Original strand, 1619605 - 1619705
Alignment:
Q  508 ctccacctcaagttgagctttctctacctcaacttccaaatgagtac-ttccactatg-cttccgccttgccactccacctcaaaggttgatcacgagta 605  Q
    |||||||||||| ||| ||||||||||||||||||||||||| |||| | |||| ||| ||| | |||||  ||||||||| ||||| ||||||| ||||    
T  1619605 ctccacctcaagctgaactttctctacctcaacttccaaatgcgtacatcccaccatgtctttcaccttgaaactccacctaaaaggctgatcacaagta 1619704  T
Q  606 t 606  Q
    |    
T  1619705 t 1619705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 370
Target Start/End: Original strand, 10956972 - 10957024
Alignment:
Q  318 gaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctt 370  Q
    |||| |||||||| |||| |||||||||||||||||| |||||||||||||||    
T  10956972 gaacatctcccgcttccttgaagatcaccttgcatccaatcacccttggcctt 10957024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 37466897 - 37466952
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| |||||||| |||||||||| || ||||||||||||||||||    
T  37466897 atttctccaccttgacttctaatt-ggtgatgatgtcagtttaaccatcaaccacca 37466952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 370
Target Start/End: Complemental strand, 43227715 - 43227663
Alignment:
Q  318 gaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctt 370  Q
    |||| |||||||| |||| |||||||||||||||||| |||||||||||||||    
T  43227715 gaacatctcccgcttccttgaagatcaccttgcatccaatcacccttggcctt 43227663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 23197903 - 23197969
Alignment:
Q  112 aaggagagggaagatgaaaacaataaacacaagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||| ||||| |||||||| | |||| | |||||| ||||||||||||||||||||||||||||    
T  23197903 aaggagagagaagaggaaaacaa-agacaccaaagattgttcacccagttcggtccaaacttgaccta 23197969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 527
Target Start/End: Complemental strand, 23635098 - 23634904
Alignment:
Q  337 gaagatcaccttgcatccgatcacccttggcctttta----ggcaatcacacaagccactccatacattcttcaaaccccggaataccatccatcctcat 432  Q
    ||||||||||||| |||| |||||||||||||||||     || |||| | ||||||   | ||||||||||||| |  |||||| || ||| || ||||    
T  23635098 gaagatcaccttgtatccaatcacccttggcctttttttagggtaatcccgcaagccgtgctatacattcttcaaccttcggaatgccttccgtcttcat 23634999  T
Q  433 gaagaatccacatgctcaccactagagcataaactcccaaag-cctccatagccgtaccattcccggagtcaccaactccacctcaagttgagctt 527  Q
    ||||||  | | ||||||||| |||||||||| | || || | ||||||||||||||||||| | || ||   ||||||||||||||| |||||||    
T  23634998 gaagaaatcccttgctcaccagtagagcataa-caccgaaggtcctccatagccgtaccattactggtgtgttcaactccacctcaagctgagctt 23634904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 294 - 367
Target Start/End: Complemental strand, 11169759 - 11169687
Alignment:
Q  294 ttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggc 367  Q
    ||||||| | |||||||||| ||  ||| |||||||| |||| |||||||||||||||||| ||||||||||||    
T  11169759 ttcaccataacatcttcaac-acaaaacatctcccgcttccttgaagatcaccttgcatccaatcacccttggc 11169687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 323 - 372
Target Start/End: Complemental strand, 42991628 - 42991579
Alignment:
Q  323 tctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctttt 372  Q
    |||||||| |||| ||||||||||||| |||| |||||||||||||||||    
T  42991628 tctcccgcttccttgaagatcaccttgtatccaatcacccttggcctttt 42991579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 318 - 370
Target Start/End: Original strand, 4309135 - 4309187
Alignment:
Q  318 gaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctt 370  Q
    |||| |||||||| |||| ||| |||||||||||||| |||||||||||||||    
T  4309135 gaacatctcccgcttccttgaatatcaccttgcatccaatcacccttggcctt 4309187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 4386501 - 4386446
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| | |||| |||||||||||| || ||||||||||||||||||    
T  4386501 atttctccaccttgact-ctaaattggtgatgatgtcaatttaaccatcaaccacca 4386446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 7779967 - 7780034
Alignment:
Q  112 aaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||||||||| |||||||| | |||| ||||||||| ||||||| || |||||||||||||||||    
T  7779967 aaggagagggaagaggaaaacaa-agacaccaagagattgttcacccactttggtccaaacttgaccta 7780034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 22172662 - 22172606
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| ||||||||||||| ||||  || | ||||||||||||||||    
T  22172662 atttctccaccttgacttctaatttggtggtgatatcaatataaccatcaaccacca 22172606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 606
Target Start/End: Original strand, 28138308 - 28138440
Alignment:
Q  477 tccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtac-ttccactatg-cttccgcctt 574  Q
    ||||||| ||||||||| |||| ||   ||||||||||||||| ||||| | |||||||||||||  |||||| |||| | |||||||| ||||  ||||    
T  28138308 tccatagtcgtaccattaccggtgtgttcaactccacctcaagctgagcgtactctacctcaactagcaaatgcgtacatcccactatgtcttcaacctt 28138407  T
Q  575 gccactccacctcaa-aggttgatcacgagtat 606  Q
    |  |||||||||||| |||| ||||| ||||||    
T  28138408 gaaactccacctcaacaggtagatcatgagtat 28138440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 43402625 - 43402657
Alignment:
Q  208 gatgatgccactttaaccatcaaccaccaatct 240  Q
    |||||||||||||||||||||||||||||||||    
T  43402625 gatgatgccactttaaccatcaaccaccaatct 43402657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 370
Target Start/End: Original strand, 35918808 - 35918855
Alignment:
Q  323 tctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctt 370  Q
    |||||| | |||| |||||||||||||||||| |||||||||||||||    
T  35918808 tctcccacttccttgaagatcaccttgcatccaatcacccttggcctt 35918855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 293 - 367
Target Start/End: Complemental strand, 457565 - 457492
Alignment:
Q  293 tttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggc 367  Q
    |||||||| | |||||||||| || |||| |||||  | |||| |||||||||||||||||| ||||||||||||    
T  457565 tttcaccataacatcttcaac-acagaacatctcctacttccttgaagatcaccttgcatccaatcacccttggc 457492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 293 - 367
Target Start/End: Original strand, 6064393 - 6064466
Alignment:
Q  293 tttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggc 367  Q
    |||||||| | ||||||||||  | |||| ||||| || |||| |||||||||||||||||| ||||||||||||    
T  6064393 tttcaccataacatcttcaacg-cagaacatctcctgcttccttgaagatcaccttgcatccaatcacccttggc 6064466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 179
Target Start/End: Complemental strand, 7762437 - 7762403
Alignment:
Q  145 agattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||| ||||||||||||||||||||||||||||    
T  7762437 agattgttcacccagttcggtccaaacttgaccta 7762403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 179
Target Start/End: Complemental strand, 9581454 - 9581420
Alignment:
Q  145 agattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||| ||||||||||||||||||||||||||||    
T  9581454 agattgttcacccagttcggtccaaacttgaccta 9581420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 141 - 179
Target Start/End: Original strand, 9636118 - 9636156
Alignment:
Q  141 caagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||||| |||||||||||||| |||||||||||||    
T  9636118 caagagattgttcacccagttcggttcaaacttgaccta 9636156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 179
Target Start/End: Original strand, 19683885 - 19683919
Alignment:
Q  145 agattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||| ||||||||||||||||||||||||||||    
T  19683885 agattgttcacccagttcggtccaaacttgaccta 19683919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 505 - 606
Target Start/End: Complemental strand, 27422133 - 27422031
Alignment:
Q  505 caactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatg-cttccgccttgccactccacctcaaaggttgatcacgag 603  Q
    ||||||||||| ||| ||||||||||||| |||||||||||  || |||| |||| |||| |||   |||||| |||||| || ||||| || |||||||    
T  27422133 caactccaccttaagctgagctttctctagctcaacttccatttgtgtacatccaatatgactttgcccttgcaactccatcttaaaggctggtcacgag 27422034  T
Q  604 tat 606  Q
    |||    
T  27422033 tat 27422031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 294 - 372
Target Start/End: Original strand, 43422353 - 43422430
Alignment:
Q  294 ttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctttt 372  Q
    ||||||| | |||||||||| || | || |||||||| |||| ||||||||||| |||||| |||||||||||| ||||    
T  43422353 ttcaccataacatcttcaac-acaggacatctcccgcttccttgaagatcacctagcatccaatcacccttggcatttt 43422430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 179
Target Start/End: Complemental strand, 45095335 - 45095301
Alignment:
Q  145 agattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||| ||||||||||||||||||||||||||||    
T  45095335 agattgttcacccagttcggtccaaacttgaccta 45095301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 606
Target Start/End: Original strand, 4309301 - 4309405
Alignment:
Q  505 caactccacctcaagttgagctttctctacctcaacttccaaatgagtac-ttccactatg-cttccgccttgccactccacctcaa-aggttgatcacg 601  Q
    ||||||||||||| ||||||| | |||||||||||||  |||||| |||| | |||||||| ||||  |||||  |||||||||||| |||| ||||| |    
T  4309301 caactccacctcacgttgagcgtactctacctcaactagcaaatgcgtacatcccactatgtcttcaaccttgaaactccacctcaacaggtagatcatg 4309400  T
Q  602 agtat 606  Q
    |||||    
T  4309401 agtat 4309405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 404; Significance: 0; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 404; E-Value: 0
Query Start/End: Original strand, 180 - 606
Target Start/End: Complemental strand, 5137875 - 5137448
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttcctttt-cccttgcatccaactctacaccaagttgctc 278  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5137875 atttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccaatcttcctttttcccttgcatccaactctacaccaagttgctc 5137776  T
Q  279 cacaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaa 378  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5137775 cacaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctccttgaagatcaccttgcatccgatcacccttggccttttaggcaa 5137676  T
Q  379 tcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctc 478  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5137675 tcacacaagccactccatacattcttcaaaccccggaataccatccgtcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctc 5137576  T
Q  479 catagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgcca 578  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5137575 catagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgcca 5137476  T
Q  579 ctccacctcaaaggttgatcacgagtat 606  Q
    ||||||||||||||||||||| ||||||    
T  5137475 ctccacctcaaaggttgatcatgagtat 5137448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 180 - 606
Target Start/End: Complemental strand, 8395191 - 8394774
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttcccttgcatccaactctacaccaagttgctcc 279  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||    
T  8395191 atttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccc--ctttcttttcccttgcatccaactctacaccaagttgctcc 8395094  T
Q  280 acaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaat 379  Q
    |||||||||||       |||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||| |||    
T  8395093 acaagtcttca-------ccaagccatcttcaactacggaacgtctcccgcctccttgaagatcaccttgcatccgatcacctttggtcttttaggtaat 8395001  T
Q  380 cacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctcc 479  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| || |||||||| ||||||||||| |||||||||||||||    
T  8395000 cacacaagccaccccatacattcttcaaaccccggaataccatccgtcctcatgaagaattcatatgctcacaactagagcatacactcccaaagcctcc 8394901  T
Q  480 atagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccac 579  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8394900 atagtcgtaccattcccggagtcaccaactccacctcaagttgagctttcgctacctcaacttccaaatgagtacttccactatgcttccgccttgccac 8394801  T
Q  580 tccacctcaaaggttgatcacgagtat 606  Q
    |||||||||||||||||||| ||||||    
T  8394800 tccacctcaaaggttgatcatgagtat 8394774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 180 - 606
Target Start/End: Complemental strand, 7124489 - 7124064
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttcctttt------cccttgcatccaactctacaccaagt 273  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  | ||  ||||      || |||||||||||||||||| ||||    
T  7124489 atttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccccttttttttttttttttcctttgcatccaactctacactaagt 7124390  T
Q  274 tgctccacaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctttta 373  Q
    |||||||||||||||||       |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||    
T  7124389 tgctccacaagtcttca-------ccaaaccatcttcaactacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccgtgatctttta 7124297  T
Q  374 ggcaatcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaa 473  Q
    ||||| |||||||| ||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7124296 ggcaagcacacaagtcaccccatacattcttcaaaccccggaataccttccgtcctcatgaagaatccacatgctcaccactagagcataaactcccaaa 7124197  T
Q  474 gcctccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgcct 573  Q
    ||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  7124196 gcctccacagccgtaccattcccggagttagcaactccacctcaagttgagctttctctacctcaacttccaaatgcgtacatccactatgcttccgcct 7124097  T
Q  574 tgccactccacctcaaaggttgatcacgagtat 606  Q
    |||||||||||||||||||||||||||||||||    
T  7124096 tgccactccacctcaaaggttgatcacgagtat 7124064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 182 - 606
Target Start/End: Original strand, 12740129 - 12740546
Alignment:
Q  182 ttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttc----ccttgcatccaactctacaccaagttgct 277  Q
    ||||||||||||| ||| |||| | | |||||||||||||| ||||||||||  ||||  |||||||    ||||||||||||||  ||||||||| |||    
T  12740129 ttctccaccttgacttcaaatt-gataatgatgccactttagccatcaaccagtaatcc-ccttttcttttccttgcatccaact--acaccaagtagct 12740224  T
Q  278 ccacaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggca 377  Q
    |||||||| | ||       ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||| |||||||| |    
T  12740225 ccacaagtataca-------ccaaaccatcttcaaccacggaacgtctcccgcttccttgaagatcaccttgcatccaatcacccttggtcttttaggta 12740317  T
Q  378 atcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcct 477  Q
    |||||||||||||| |||||||||||||||||||||||||  | ||| |||||||||||||| ||| |||| || |||||||||||||| ||||| ||||    
T  12740318 atcacacaagccacaccatacattcttcaaaccccggaatgtcttccgtcctcatgaagaattcacgtgcttacaactagagcataaacacccaaggcct 12740417  T
Q  478 ccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgcc 577  Q
    ||||||  |||||||| ||||  ||| |||||| |||||||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||     
T  12740418 ccatagttgtaccatttccggtatcatcaactctacctcaagttgagctttctctacctcaacttccaaatgagtacacacactatgcttccaccttgca 12740517  T
Q  578 actccacctcaaaggttgatcacgagtat 606  Q
    |||||||||||||||||||||||||||||    
T  12740518 actccacctcaaaggttgatcacgagtat 12740546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 182 - 606
Target Start/End: Original strand, 12748335 - 12748752
Alignment:
Q  182 ttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttc----ccttgcatccaactctacaccaagttgct 277  Q
    ||||||||||||| ||| |||| | | |||||||||||||| ||||||||||  ||||  |||||||    ||||||||||||||  ||||||||| |||    
T  12748335 ttctccaccttgacttcaaatt-gataatgatgccactttagccatcaaccagtaatcc-ccttttcttttccttgcatccaact--acaccaagtagct 12748430  T
Q  278 ccacaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggca 377  Q
    |||||||| | ||       ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||| |||||||| |    
T  12748431 ccacaagtataca-------ccaaaccatcttcaaccacggaacgtctcccgcttccttgaagatcaccttgcatccaatcacccttggtcttttaggta 12748523  T
Q  378 atcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcct 477  Q
    |||||||||||||| |||||||||||||||||||||||||  | ||| |||||||||||||| ||| |||| || |||||||||||||| ||||| ||||    
T  12748524 atcacacaagccacaccatacattcttcaaaccccggaatgtcttccgtcctcatgaagaattcacgtgcttacaactagagcataaacacccaaggcct 12748623  T
Q  478 ccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgcc 577  Q
    ||||||  |||||||| ||||  ||| |||||| |||||||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||     
T  12748624 ccatagttgtaccatttccggtatcatcaactctacctcaagttgagctttctctacctcaacttccaaatgagtacacacactatgcttccaccttgca 12748723  T
Q  578 actccacctcaaaggttgatcacgagtat 606  Q
    |||||||||||||||||||||||||||||    
T  12748724 actccacctcaaaggttgatcacgagtat 12748752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 182 - 605
Target Start/End: Original strand, 34570996 - 34571410
Alignment:
Q  182 ttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttc-----cttttcccttgcatccaactctacaccaagttgc 276  Q
    ||||||||||| | ||| |||| | |||||||||||||||||||||||||||||||| | |     ||||||||||||||||||||  ||||||||| ||    
T  34570996 ttctccaccttaacttcaaatt-gatgatgatgccactttaaccatcaaccaccaatttcctttttcttttcccttgcatccaact--acaccaagtagc 34571092  T
Q  277 tccacaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggc 376  Q
    |||| |||||| ||       ||||||| ||||||||||||||| ||||||||| |||| |||||||||||||||||| ||||||||||| ||||||||     
T  34571093 tccataagtctaca-------ccaaaccctcttcaaccacggaatgtctcccgcttccttgaagatcaccttgcatccaatcacccttggtcttttaggt 34571185  T
Q  377 aatcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcc 476  Q
    ||||||||||||||  ||||||| ||||||||||||||||| || ||| |||||||||||||| ||||||||||| |||||||||| | | ||||| |||    
T  34571186 aatcacacaagccagaccatacagtcttcaaaccccggaatgccttccgtcctcatgaagaattcacatgctcacaactagagcat-agcacccaaggcc 34571284  T
Q  477 tccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgc 576  Q
    | |||||  ||| ||||| ||| |||||||||||||||||||||||||||   | |||||||||||||||||| |||| | |||||||  | | ||||||    
T  34571285 ttcatagttgtatcattctcggtgtcaccaactccacctcaagttgagct---tatacctcaacttccaaatgcgtacatacactatgtcttcaccttgc 34571381  T
Q  577 cactccacctcaaaggttgatcacgagta 605  Q
     ||||||||||||||||||||||||||||    
T  34571382 aactccacctcaaaggttgatcacgagta 34571410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 359 - 606
Target Start/End: Complemental strand, 54882184 - 54881938
Alignment:
Q  359 acccttggccttttaggcaatcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactaga 458  Q
    |||||||| |||||||| |||||||||||| || ||||||||||||||| ||| ||||| ||  || | ||| |||||||| ||||||||||| ||||||    
T  54882184 acccttggtcttttaggtaatcacacaagcaacaccatacattcttcaaccccgggaatgcctcccgtactcttgaagaattcacatgctcacaactaga 54882085  T
Q  459 gcataaactcccaaagcctccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttcc 558  Q
    |||||| | ||||| |||||||||| |||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||   |    
T  54882084 gcataa-cacccaaggcctccatagtcgtaccattctcggtgtcactaactccacctcaagttgagctttctctacctcaacttccaaatgtgtacacac 54881986  T
Q  559 actatgcttccgccttgccactccacctcaaaggttgatcacgagtat 606  Q
    ||||||||| | ||||| |||||||||| |||||||||||||||||||    
T  54881985 actatgctttcaccttgtcactccaccttaaaggttgatcacgagtat 54881938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 5136382 - 5136203
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaac-aaacaccacctagatccaatctaggaaacaagtgtgaaacaaagcaacc-aaa 98  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||| || ||||||| |||||||||| ||||||||||||||||||||| |||    
T  5136382 gagtggtaaccaccaaacaaagcttattgagcaagcaagagacaacaaaacatca-ctagatctaatctaggaaccaagtgtgaaacaaagcaaccaaaa 5136284  T
Q  99 cacaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5136283 cacaagata-aacaaggagagggaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgaccta 5136203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 5138607 - 5138428
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaac-aaacaccacctagatccaatctaggaaacaagtgtgaaacaaagcaacc-aaa 98  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||| || ||||||| |||||||||| ||||||||||||||||||||| |||    
T  5138607 gagtggtaaccaccaaacaaagcttattgagcaagcaagagacaacaaaacatca-ctagatctaatctaggaaccaagtgtgaaacaaagcaaccaaaa 5138509  T
Q  99 cacaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5138508 cacaagata-aacaaggagagggaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgaccta 5138428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 8393711 - 8393532
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaac-aaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaaccaa 97  Q
    |||||||||||||||||| ||| |||||| |||||||||||||||| |||||||||||||||| |||||||||| ||||||||||  ||||||||| |||    
T  8393711 gagtggtaaccaccaaacgaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaa-caa 8393613  T
Q  98 acacaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
     ||||||||| |  | |||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  8393612 tcacaagataca--atggagagggaagaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgaccta 8393532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 8395920 - 8395741
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaac-aaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaaccaa 97  Q
    |||||||||||||||||||||| |||||| |||||||| ||||||| |||||||||||||||| |||||||||| ||||||||||  ||||||||| |||    
T  8395920 gagtggtaaccaccaaacaaagtttattgtgcaagcaaaaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaa-caa 8395822  T
Q  98 acacaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
     ||||||||| |  | |||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  8395821 tcacaagataca--atggagagggaagaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgaccta 8395741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 7125218 - 7125053
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaac-aaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaaccaa 97  Q
    |||||||||||||| ||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||||| ||||||||||  ||||||||| |||    
T  7125218 gagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaa-caa 7125120  T
Q  98 acacaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtc 166  Q
     ||||||||| ||||||  ||||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  7125119 tcacaagata-aacaag--gagggaagaagaaaacaataaacacaaagagattgttcacccagttcggtc 7125053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 7122999 - 7122834
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaac-aaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaaccaa 97  Q
    |||||||||||||| ||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||||| ||||||||||  ||||||||| |||    
T  7122999 gagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaa-caa 7122901  T
Q  98 acacaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtc 166  Q
     ||||||||| ||||||  ||||||||| ||||||||||||||| |||| |||| |||||||||||||||    
T  7122900 tcacaagata-aacaag--gagggaagaagaaaacaataaacacaaagaaattgttcacccagttcggtc 7122834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 306 - 541
Target Start/End: Complemental strand, 10114279 - 10114044
Alignment:
Q  306 tcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctttta-ggcaatcacacaagccactccatacattctt 404  Q
    ||||||||||||||||||||||||| |||| ||||||| |||| ||||| |||||||||||  ||||| ||||||| |||||||||  ||||||||||||    
T  10114279 tcttcaaccacggaacgtctcccgcttccttgaagatctccttccatccaatcacccttggtattttagggcaatcccacaagccatgccatacattctt 10114180  T
Q  405 caaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctccatagccgtaccattcccggagtcac 504  Q
    ||||| |||||||  | |   || ||||||||||| |   ||||||| |||| || || ||| ||||| | |||||||| |||||||||||||| ||       
T  10114179 caaactccggaatgtcttatgtcttcatgaagaattccattgctcacaactaaagaat-aacacccaaggtctccatagtcgtaccattcccggtgtgtt 10114081  T
Q  505 caactccacctcaagttgagctttctctacctcaact 541  Q
     |||||||||||||| ||||| || || |||||||||    
T  10114080 taactccacctcaagctgagcgttgtcaacctcaact 10114044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 296 - 606
Target Start/End: Complemental strand, 26559332 - 26559022
Alignment:
Q  296 caccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaatcacacaagccactcca 395  Q
    ||||||| | ||||||||||| ||||||||||||| |||  ||||||| |||||||||| ||||||||||  |||||||  ||||||||||| ||  |||    
T  26559332 caccaaatcctcttcaaccacagaacgtctcccgcttccgtgaagatctccttgcatccaatcacccttgatcttttagataatcacacaagtcatgcca 26559233  T
Q  396 tacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctccatagccgtaccattcc 495  Q
    ||||| |||||||| |   ||| ||  | ||| || | || |||     |||| || |||||||| | | | ||||| | ||||||||  ||||||||      
T  26559232 tacatacttcaaactcataaatgcctcctatcttcttcaaaaattatgttgctaacaactagagcct-agcacccaaggtctccatagttgtaccattta 26559134  T
Q  496 cggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatg-cttccgccttgccactccacctcaaaggtt 594  Q
     || |||| ||||||||||| | | |||||||||||||| ||||||| |||||| || | ||||||||| ||| | | |||  |||||||||||||||||    
T  26559133 tggtgtcatcaactccaccttacgatgagctttctctacatcaacttgcaaatgcgtgcatccactatgactttcactttgaaactccacctcaaaggtt 26559034  T
Q  595 gatcacgagtat 606  Q
    ||||| ||||||    
T  26559033 gatcatgagtat 26559022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 294 - 606
Target Start/End: Original strand, 14788315 - 14788632
Alignment:
Q  294 ttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctttt----aggcaatcacacaagcc 389  Q
    ||||||| | |||||||||| || | || |||||||| |||| |||||||||||||||||| |||||||||||||||||     || |||| | ||||||    
T  14788315 ttcaccataacatcttcaac-acaggacatctcccgcttccttgaagatcaccttgcatccaatcacccttggcctttttttagggtaatcccgcaagcc 14788413  T
Q  390 actccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaag-cctccatagccgta 488  Q
       | ||||||||||||| | ||||||  || ||| || || |||||||  | | ||||||||| |||||||| | | ||||| | ||||||||||||||    
T  14788414 gtgctatacattcttcaacctccggaacgccttccgtcttcgtgaagaaatcccttgctcacca-tagagcat-agcacccaacgtcctccatagccgta 14788511  T
Q  489 ccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtac-ttccactatg-cttccgccttgccactccacct 586  Q
    ||||| |||| ||   ||||||||||||| | ||||| | |||||||||||||  |||||| |||| | |||||||| ||||  |||||  |||||||||    
T  14788512 ccattaccggtgtgttcaactccacctcacgctgagcgtactctacctcaactagcaaatgtgtacatcccactatgtcttcaaccttgaaactccacct 14788611  T
Q  587 caa-aggttgatcacgagtat 606  Q
    ||| |||| ||||| ||||||    
T  14788612 caacaggtagatcatgagtat 14788632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 180 - 235
Target Start/End: Original strand, 18856309 - 18856364
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacc 235  Q
    ||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||    
T  18856309 atttctccaccttgacttctaatttggtggtgatgccaatttaaccatcaaccacc 18856364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 346 - 541
Target Start/End: Complemental strand, 36770849 - 36770653
Alignment:
Q  346 cttgcatccgatcacccttggccttttaggc-aatcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccaca 444  Q
    ||||||||| |||| |||||| ||||||||  |||| |||||||||    ||||||||||||| | ||||||| || ||| || ||||||||||| | |     
T  36770849 cttgcatccaatcaaccttggtcttttagggtaatcccacaagccatgttatacattcttcaacctccggaatgccttccgtcttcatgaagaattccct 36770750  T
Q  445 tgctcaccactagagcataaactcccaaag-cctccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaact 541  Q
    ||||||| |||||||||| | | ||||| |  ||||||||||||||||||  |||  |   ||||||||||||||| | ||||| |||||||||||||    
T  36770749 tgctcacaactagagcat-agcacccaaggttctccatagccgtaccattatcggtctgttcaactccacctcaagctaagcttactctacctcaact 36770653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 9228686 - 9228630
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| ||||||||||||| ||||| || ||||||||||||||||||    
T  9228686 atttctccaccttgacttctaatttggtggtgatgtcagtttaaccatcaaccacca 9228630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 31495279 - 31495346
Alignment:
Q  112 aaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||||||||| |||||||| | |||| ||||||||| ||||||||||||||||||||||||||||    
T  31495279 aaggagagggaagaggaaaacaa-agacaccaagagattgttcacccagttcggtccaaacttgaccta 31495346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 294 - 372
Target Start/End: Complemental strand, 16454756 - 16454679
Alignment:
Q  294 ttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctttt 372  Q
    ||||||| | |||||||||| || | || |||||||| |||| |||||||||||||||||| |||||||||||||||||    
T  16454756 ttcaccataacatcttcaac-acaggacatctcccgcttccttgaagatcaccttgcatccaatcacccttggcctttt 16454679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 323 - 370
Target Start/End: Original strand, 22133210 - 22133257
Alignment:
Q  323 tctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctt 370  Q
    |||||||| |||| |||||||||||||||||| |||||||||||||||    
T  22133210 tctcccgcttccttgaagatcaccttgcatccaatcacccttggcctt 22133257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 16628344 - 16628290
Alignment:
Q  182 ttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    |||||||||| || ||||||||||||| ||||| || ||||||||||||||||||    
T  16628344 ttctccacctcgacttctaatttggtggtgatgtcaatttaaccatcaaccacca 16628290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 606
Target Start/End: Original strand, 22801682 - 22801971
Alignment:
Q  323 tctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctttta----ggcaatcacacaagccactccatacattcttcaaaccccggaata 418  Q
    |||||||| |||| |||| |  |||||||||| |||||||||||||||||     || |||| | ||||||   | ||||||||||||| | |||||||     
T  22801682 tctcccgcttccttgaaggtttccttgcatccaatcacccttggcctttttttagggtaatcccgcaagccgtgctatacattcttcaacctccggaatg 22801781  T
Q  419 ccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaag-cctccatagccgtaccattcccggagtcaccaactccacctca 517  Q
    || ||| || ||||||||||  | | ||||||||| |||||||||  | ||||| | ||||||||| ||||||||| |||| ||   |||||||||||||    
T  22801782 ccttccgtcttcatgaagaaatcccttgctcacca-tagagcatag-cacccaaggtcctccatagtcgtaccattaccggtgtgttcaactccacctca 22801879  T
Q  518 agttgagctttctctacctcaacttccaaatgagtac-ttccactatg-cttccgccttgccactccacctcaa-aggttgatcacgagtat 606  Q
     | ||||| |  ||||||||||||  |||||| |||| | |||||||| ||||  |||||  |||||||||||| |||| ||||| ||||||    
T  22801880 cgctgagcgtattctacctcaactagcaaatgtgtacatcccactatgtcttcaaccttgaaactccacctcaacaggtagatcatgagtat 22801971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 541
Target Start/End: Complemental strand, 36379649 - 36379427
Alignment:
Q  323 tctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctttt----aggcaatcacacaagccactccatacattcttcaaaccccggaata 418  Q
    |||||||| |||| |||||||||||||||| | |||||||||||||||||     || |||| | ||||||   | ||||||||||||| | | |||||     
T  36379649 tctcccgcttccttgaagatcaccttgcattcaatcacccttggcctttttttagggtaatcccgcaagccgtgctatacattcttcaatctctggaatg 36379550  T
Q  419 ccatccatcctcatgaag-aatccacatgctcaccactagagcataaactcccaaagcctccatagccgtaccattcccggagtcaccaactccacctca 517  Q
    || ||| |  |||||||| ||| ||  |||||||||||||||||||   ||| |   ||||||||| |||||||||||||| ||    ||||||||||||    
T  36379549 ccttccgttttcatgaagaaattca-ttgctcaccactagagcatagcatccaaggtcctccatagtcgtaccattcccggtgtgtttaactccacctca 36379451  T
Q  518 agttgagctttctctacctcaact 541  Q
    |  ||||| | |||||||||||||    
T  36379450 aactgagcgtactctacctcaact 36379427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 294 - 367
Target Start/End: Original strand, 16932749 - 16932821
Alignment:
Q  294 ttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggc 367  Q
    ||||||| | |||||||||| || | || |||||||| |||| |||||||||||||||||| ||||||||||||    
T  16932749 ttcaccataacatcttcaac-acaggacatctcccgcttccttgaagatcaccttgcatccaatcacccttggc 16932821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 3778174 - 3778227
Alignment:
Q  182 ttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||| |||||||| |||| ||||| || ||||||||||||||||||    
T  3778174 ttctccaccttgacttctaatt-ggtggtgatgtcaatttaaccatcaaccacca 3778227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 479 - 606
Target Start/End: Original strand, 9175241 - 9175371
Alignment:
Q  479 catagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttc-cactatg-cttccgccttgc 576  Q
    ||||| ||||||||| |||| ||   ||||||||||||| ||||||| | |||||||||||||  |||||| |||| || ||||||| ||||  |||||     
T  9175241 catagtcgtaccattaccggtgtgttcaactccacctcacgttgagcgtactctacctcaactagcaaatgcgtacatctcactatgtcttcaaccttga 9175340  T
Q  577 cactccacctcaa-aggttgatcacgagtat 606  Q
     |||||||||||| |||| ||||| ||||||    
T  9175341 aactccacctcaataggtagatcatgagtat 9175371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 332 - 554
Target Start/End: Original strand, 12401676 - 12401901
Alignment:
Q  332 tcctcgaagatcaccttgcatccgatcacccttggcctttt----aggcaatcacacaagccactccatacattcttcaaaccccggaataccatccatc 427  Q
    |||| |||||||||||| ||||| |||||||||||||||||     || |||| | |||| |   | ||||||||||||| | ||||||| || ||  ||    
T  12401676 tccttgaagatcaccttacatccaatcacccttggcctttttttagggtaatcccgcaagtcgtgctatacattcttcaacctccggaattccttctgtc 12401775  T
Q  428 ctcatgaagaatccacatgctcaccactagagcataaactcccaaag-cctccatagccgtaccattcccggagtcaccaactccacctcaagttgagct 526  Q
     ||||||||||  | | ||||||||| |||||||| | | ||||| | |||||||||| |||||||| |||| |    ||||||||||||||| |||||     
T  12401776 ttcatgaagaaatcccttgctcacca-tagagcat-agcacccaaggtcctccatagctgtaccattaccggtgagttcaactccacctcaagctgagcg 12401873  T
Q  527 ttctctacctcaacttccaaatgagtac 554  Q
    | |||||||||||||  |||||| ||||    
T  12401874 tactctacctcaactagcaaatgcgtac 12401901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 475 - 606
Target Start/End: Original strand, 22133346 - 22133480
Alignment:
Q  475 cctccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtac-ttccactatg-cttccgcc 572  Q
    ||||||||| ||||||||| |||| ||   ||||||||||||| | ||||| | |||||||||||||  |||||| |||| | |||||||| ||||  ||    
T  22133346 cctccatagtcgtaccattaccggtgtgttcaactccacctcacgctgagcgtactctacctcaactagcaaatgcgtacatcccactatgtcttcaacc 22133445  T
Q  573 ttgccactccacctcaa-aggttgatcacgagtat 606  Q
    |||  |||||||||||| |||| ||||| ||||||    
T  22133446 ttgaaactccacctcaacaggtagatcatgagtat 22133480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 179
Target Start/End: Original strand, 56178633 - 56178667
Alignment:
Q  145 agattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||| ||||||||||||||||||||||||||||    
T  56178633 agattgttcacccagttcggtccaaacttgaccta 56178667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 541
Target Start/End: Complemental strand, 16454572 - 16454507
Alignment:
Q  476 ctccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaact 541  Q
    |||||||| ||||||||| |||| ||   ||||||||||||||| ||||| | |||||||||||||    
T  16454572 ctccatagtcgtaccattaccggtgtgttcaactccacctcaagctgagcgtactctacctcaact 16454507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 367
Target Start/End: Original strand, 22781361 - 22781410
Alignment:
Q  318 gaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggc 367  Q
    |||| ||||| || |||| |||||||||||||||||| ||||||||||||    
T  22781361 gaacatctcctgcttccttgaagatcaccttgcatccaatcacccttggc 22781410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 9175094 - 9175138
Alignment:
Q  318 gaacgtctcccgcctcctcgaagatcaccttgcatccgatcaccc 362  Q
    |||| |||||||| |||| |||||||||||||||||| |||||||    
T  9175094 gaacatctcccgcttccttgaagatcaccttgcatccaatcaccc 9175138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 293 - 365
Target Start/End: Original strand, 11007168 - 11007239
Alignment:
Q  293 tttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttg 365  Q
    |||||||| | |||||||||| || |||| ||||| |  |||| |||||||||||||||||| ||||||||||    
T  11007168 tttcaccataacatcttcaac-acagaacatctcctggttccttgaagatcaccttgcatccaatcacccttg 11007239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 12396734 - 12396774
Alignment:
Q  332 tcctcgaagatcaccttgcatccgatcacccttggcctttt 372  Q
    |||| |||||||||||| ||||| |||||||||||||||||    
T  12396734 tccttgaagatcaccttacatccaatcacccttggcctttt 12396774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 606
Target Start/End: Original strand, 16932942 - 16933046
Alignment:
Q  505 caactccacctcaagttgagctttctctacctcaacttccaaatgagtac-ttccactatg-cttccgccttgccactccacctcaa-aggttgatcacg 601  Q
    ||||||||||||| | ||||| | |||||||||||||  |||||| |||| | |||||||| |||| ||||||  |||||||||||| |||| ||||| |    
T  16932942 caactccacctcacgctgagcgtactctacctcaactagcaaatgcgtacatcccactatgtcttcagccttgaaactccacctcaacaggtagatcatg 16933041  T
Q  602 agtat 606  Q
    |||||    
T  16933042 agtat 16933046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 318 - 366
Target Start/End: Original strand, 22045339 - 22045387
Alignment:
Q  318 gaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttgg 366  Q
    |||| |||||||| |||| |||||||||||||||| | |||||||||||    
T  22045339 gaacatctcccgcttccttgaagatcaccttgcattcaatcacccttgg 22045387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 368; Significance: 0; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 368; E-Value: 0
Query Start/End: Original strand, 180 - 606
Target Start/End: Original strand, 6592921 - 6593345
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttcccttgcatccaactctacaccaagttgctcc 279  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||    
T  6592921 atttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccc--ctttcttttcccttgcatccaactctacaccaagttgctcc 6593018  T
Q  280 acaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaat 379  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  6593019 acaagtcttcattttttaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggtaat 6593118  T
Q  380 cacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctcc 479  Q
    |||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6593119 cacacaagccaccccatacattcttcaaaccccggaagaccatccgtcctcatgaagaatccacatgctcacaactagagcataaactcccaaagcctcc 6593218  T
Q  480 atagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccac 579  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  6593219 ataaccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgcgtacatccactatgcttccgccttgccac 6593318  T
Q  580 tccacctcaaaggttgatcacgagtat 606  Q
    |||||||||||||||||||||||||||    
T  6593319 tccacctcaaaggttgatcacgagtat 6593345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 317; E-Value: 1e-178
Query Start/End: Original strand, 180 - 606
Target Start/End: Original strand, 18390562 - 18390983
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttcccttgcatccaactctacaccaagttgctcc 279  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||    
T  18390562 atttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccc--ctttcttttcccttgcatccaactctacaccaagttgctcc 18390659  T
Q  280 acaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaat 379  Q
    |||||||||||       |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||| |||    
T  18390660 acaagtcttca-------ccaaaccatcttcaactacggaacgtctcccgcctccttgaagatcaccttgcatccgatcacctttggtcttttaggtaat 18390752  T
Q  380 cacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgc----tcaccactagagcataaactcccaaagc 475  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||    |||| |||||||||||||||||||||||    
T  18390753 cacacaagccaccccatacattcttcaaaccccggaataccatccgtcctcatgaagaattcacatgcatgctcacaactagagcataaactcccaaagc 18390852  T
Q  476 ctccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttg 575  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  18390853 ctccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgcgtacatccactatgcttccgccttg 18390952  T
Q  576 ccactccacctcaaaggttgatcacgagtat 606  Q
    |||||||||||||||||||||||| ||||||    
T  18390953 ccactccacctcaaaggttgatcatgagtat 18390983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 182 - 606
Target Start/End: Complemental strand, 48491177 - 48490759
Alignment:
Q  182 ttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatc----ttccttttcccttgcatccaactctacaccaagttgct 277  Q
    ||||||||||||| ||| |||| | ||||||||||||||||||||||||||||||||     || ||||||||||||||||||||  ||||||||| |||    
T  48491177 ttctccaccttgacttcaaatt-gatgatgatgccactttaaccatcaaccaccaattcccttttcttttcccttgcatccaact--acaccaagtagct 48491081  T
Q  278 ccacaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggca 377  Q
    ||||| |||| ||       ||||||| ||||||||||||||||||||||||| || | |||||||||||||||||| ||||||||||| |||||||| |    
T  48491080 ccacaggtctaca-------ccaaaccctcttcaaccacggaacgtctcccgcttctttgaagatcaccttgcatccaatcacccttggtcttttaggta 48490988  T
Q  378 atcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcct 477  Q
    ||||||||||||||  ||||||||||||||||| |||||| || ||| ||||||||||||||  |||||||||| |||||||||||||| ||||| ||||    
T  48490987 atcacacaagccacatcatacattcttcaaacctcggaatgccttccgtcctcatgaagaatttacatgctcacaactagagcataaacacccaaggcct 48490888  T
Q  478 ccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgcc 577  Q
    ||||||  ||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| ||||   |||||||| | | ||||||     
T  48490887 ccatagttgtaccattcccggtgtcatctactccacctcaagttgagctttctctacctcaacttccaaatgcgtacacacactatgccttcaccttgca 48490788  T
Q  578 actccacctcaaaggttgatcacgagtat 606  Q
    ||||||||||||||||||||||| |||||    
T  48490787 actccacctcaaaggttgatcacaagtat 48490759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 180 - 605
Target Start/End: Original strand, 47674533 - 47674950
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttt---tcccttgcatccaactctacaccaagttgc 276  Q
    ||||||||||||||| ||| |||| | |||||||||||||||||||| ||||||| |||  || |||   | ||||||||||||||  ||||||||| ||    
T  47674533 atttctccaccttgacttcaaatt-gatgatgatgccactttaaccaccaaccactaattatcttttcttttccttgcatccaact--acaccaagtagc 47674629  T
Q  277 tccacaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggc 376  Q
    |||| |||||| ||       ||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||  ||||||||     
T  47674630 tccataagtctaca-------ccaaaccctcttcaaccacggaacgtctcccgcttccttgaagatcaccttgcatccgatcacccttgatcttttaggt 47674722  T
Q  377 aatcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcc 476  Q
    ||||||||||||||| ||||||||||||||||||| |||||  | ||| |||||||||||||| ||||||||||| |||||||||| | | | ||| |||    
T  47674723 aatcacacaagccacaccatacattcttcaaaccctggaatgtcttccgtcctcatgaagaattcacatgctcacaactagagcat-atcactcaaggcc 47674821  T
Q  477 tccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgc 576  Q
     ||||||  |||||||||| || |||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||   |||||||| | | ||||||    
T  47674822 accatagttgtaccattccaggtgtcatcaactccaccttaagttgagctttctctacctcaacttccaaatgcgtacacacactatgccttcaccttgc 47674921  T
Q  577 cactccacctcaaaggttgatcacgagta 605  Q
     ||||||||| ||||||||||||||||||    
T  47674922 aactccaccttaaaggttgatcacgagta 47674950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 18392048 - 18392226
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaac-aaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaaccaa 97  Q
    |||||||||||||| ||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||  ||||||||| |||    
T  18392048 gagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagcaa-caa 18392146  T
Q  98 acacaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
     ||||||||   |||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  18392147 tcacaagat---acaaggagagggaagaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgaccta 18392226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 18388612 - 18388790
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaac-aaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaaccaa 97  Q
    |||||||||||||| ||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||  ||||||||| |||    
T  18388612 gagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagcaa-caa 18388710  T
Q  98 acacaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
     ||||||||   |||| ||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  18388711 tcacaagat---acaaagagagggaagaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgaccta 18388790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 6594410 - 6594588
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaac-aaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaaccaa 97  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||||| ||||||||||  ||||||||| |||    
T  6594410 gagtggtaaccaccaaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaa-caa 6594508  T
Q  98 acacaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
     ||||||||| ||||||  ||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  6594509 tcacaagata-aacaag--gagggaagaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgaccta 6594588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 6592192 - 6592370
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaac-aaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaaccaa 97  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||||| ||||||||||  ||||||||| |||    
T  6592192 gagtggtaaccaccaaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaa-caa 6592290  T
Q  98 acacaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
     ||||||| | ||||||  ||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  6592291 tcacaaga-aaaacaag--gagggaagaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgaccta 6592370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 32060174 - 32060352
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaac-aaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaaccaa 97  Q
    |||||||||||||| ||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||||| ||||||||||  ||||||||| |||    
T  32060174 gagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaa-caa 32060272  T
Q  98 acacaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
     ||||||||| ||||||  ||||||||| ||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||    
T  32060273 tcacaagata-aacaag--gagggaagaagaaaacaataaacacaaagagattgttcaccaagttcggtccaaacttgaccta 32060352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 1560517 - 1560696
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaaaca--aagcaaccaa 97  Q
    |||||||||||||| |||| ||  ||||| ||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||  ||||||| ||    
T  1560517 gagtggtaaccaccgaacagagtatattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaac-aa 1560615  T
Q  98 acacaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
     ||||||||| ||||||||||||||||| |||||||| | |||| ||||||||||| ||||||||||||||||||||||||||    
T  1560616 tcacaagata-aacaaggagagggaagaagaaaacaa-atacaccaagagattggttacccagttcggtccaaacttgaccta 1560696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 393 - 606
Target Start/End: Complemental strand, 6048115 - 6047903
Alignment:
Q  393 ccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctccatagccgtaccat 492  Q
    |||| |||||||||||||||| ||| || | | ||||| ||||||||   | ||||||| |||||||| ||  | ||||| | | ||||||  |||||||    
T  6048115 ccatgcattcttcaaaccccgaaatgcctttcgtcctcttgaagaatttccttgctcacaactagagcctag-cacccaaggtc-ccatagttgtaccat 6048018  T
Q  493 tcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatg-cttccgccttgccactccacctcaaag 591  Q
    || ||  |||| ||||||||||||||| |||  ||||||||||||||||||||||| |||||   ||||||| ||| | |||||| ||||||||||||||    
T  6048017 tctcgatgtcatcaactccacctcaagctgacatttctctacctcaacttccaaataagtacgcacactatgtctttcaccttgcaactccacctcaaag 6047918  T
Q  592 gttgatcacgagtat 606  Q
    |||||| || |||||    
T  6047917 gttgattacaagtat 6047903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 377 - 554
Target Start/End: Complemental strand, 26214370 - 26214194
Alignment:
Q  377 aatcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcc 476  Q
    |||| |||||||||  |||||||||||||||||  ||||||  | ||| || || |||||||| | | ||||||| |||||||  ||  | ||||| | |    
T  26214370 aatcccacaagccaagccatacattcttcaaactacggaatgtcttccgtcttcttgaagaattcccttgctcacaactagagtctag-cacccaaggtc 26214272  T
Q  477 tccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtac 554  Q
    ||||||| |||| | ||||  | |||||||||||||||||||| |||||||| |||||||||||||||||||| ||||    
T  26214271 tccatagtcgtatcgttcctagtgtcaccaactccacctcaagctgagctttatctacctcaacttccaaatgcgtac 26214194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 294 - 554
Target Start/End: Complemental strand, 44726326 - 44726063
Alignment:
Q  294 ttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctttta----ggcaatcacacaagcc 389  Q
    ||||||| | |||||||||| || | || |||||||| |||| |||| || |||||||||| |||||||||| ||||||     || |||| | ||||||    
T  44726326 ttcaccataacatcttcaac-acaggacatctcccgcttccttgaaggtctccttgcatccaatcacccttgacctttttttagggtaatcccgcaagcc 44726228  T
Q  390 actccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaag-cctccatagccgta 488  Q
       |  |||||||||||| | ||||||| || |||||| ||||||||||  | | |||||||||||||||||| ||| ||||| | ||||||||| ||||    
T  44726227 gtgctgtacattcttcaacctccggaatgccttccatcttcatgaagaaatcccttgctcaccactagagcat-aacacccaaggtcctccatagtcgta 44726129  T
Q  489 ccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtac 554  Q
    ||||| |||| ||   ||||||||||||| | ||||| | |||||||||||||  |||||| ||||    
T  44726128 ccattaccggtgtgttcaactccacctcacgctgagcgtactctacctcaactagcaaatgcgtac 44726063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 324 - 599
Target Start/End: Original strand, 24815942 - 24816219
Alignment:
Q  324 ctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggc-aatcacacaagccactccatacattcttcaaaccccggaataccat 422  Q
    ||||||| |||  ||||||| |||| ||||| |||| |||||||||||||||  |||| | ||||| |  | ||||||||||||| | ||| |||||| |    
T  24815942 ctcccgcttccatgaagatctcctttcatccaatcaaccttggccttttagggtaatcccgcaagctatgctatacattcttcaacctccgaaatacctt 24816041  T
Q  423 ccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaag-cctccatagccgtaccattcccggagtcaccaactccacctcaagtt 521  Q
    || || ||||||||||||| | |||||||||||||||||| | | ||| | | || || ||| |||||||||| ||| ||   ||||||||||||||| |    
T  24816042 ccttcttcatgaagaatcc-cttgctcaccactagagcat-agcacccgaggtccaccgtagtcgtaccattctcggtgtgttcaactccacctcaagct 24816139  T
Q  522 gagctttctctacctcaacttccaaatgagtac-ttccactatg-cttccgccttgccactccacctcaaaggttgatca 599  Q
    |||| | |||||| ||||||  ||||||  ||| | |||||||| ||||| |||||  ||||||||||||| || |||||    
T  24816140 gagcgtactctacttcaactagcaaatgcatacatcccactatgtcttccaccttgaaactccacctcaaatgtagatca 24816219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 512 - 600
Target Start/End: Complemental strand, 6430849 - 6430761
Alignment:
Q  512 acctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccactccacctcaaaggttgatcac 600  Q
    |||||||| |||| |||||| ||||||||||||||| | ||||   |||||||| | | |||||| |||||||||||||||||||||||    
T  6430849 acctcaagctgagatttctccacctcaacttccaaacgcgtacacacactatgccttcaccttgcaactccacctcaaaggttgatcac 6430761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 12397492 - 12397548
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| ||||||||||||| ||||| || ||||||||||||||||||    
T  12397492 atttctccaccttgacttctaatttggtggtgatgtcagtttaaccatcaaccacca 12397548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 20000334 - 20000390
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| ||||||||||||| ||||| || ||||||||||||||||||    
T  20000334 atttctccaccttgacttctaatttggtggtgatgtcaatttaaccatcaaccacca 20000390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 21640423 - 21640479
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| ||||||||||||| ||||| || ||||||||||||||||||    
T  21640423 atttctccaccttgacttctaatttggtggtgatgtcagtttaaccatcaaccacca 21640479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 24265677 - 24265621
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| ||||||||||||| ||||| || ||||||||||||||||||    
T  24265677 atttctccaccttgacttctaatttggtggtgatgtcaatttaaccatcaaccacca 24265621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 509 - 565
Target Start/End: Complemental strand, 25560050 - 25559994
Alignment:
Q  509 tccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgc 565  Q
    ||||||||||| |||| ||| ||||||| ||||||||||||||||||||||||||||    
T  25560050 tccacctcaagctgagatttttctaccttaacttccaaatgagtacttccactatgc 25559994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 294 - 370
Target Start/End: Complemental strand, 28486952 - 28486877
Alignment:
Q  294 ttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctt 370  Q
    ||||||||| ||||||||||  | |||| |||||||| |||| |||||||||||||||||| |||||||||||||||    
T  28486952 ttcaccaaaacatcttcaacg-cagaacatctcccgcttccttgaagatcaccttgcatccaatcacccttggcctt 28486877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 507 - 606
Target Start/End: Original strand, 4509986 - 4510085
Alignment:
Q  507 actccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccactccacctcaaaggttgatcacgagtat 606  Q
    |||||||||||||||||| |||||  ||||||||||||||| | ||||    ||| ||| |   |||||| |||||||||||||||||||||||||||||    
T  4509986 actccacctcaagttgagatttctgcacctcaacttccaaacgcgtacacatactctgcctttaccttgcaactccacctcaaaggttgatcacgagtat 4510085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 507 - 606
Target Start/End: Original strand, 4511828 - 4511927
Alignment:
Q  507 actccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccactccacctcaaaggttgatcacgagtat 606  Q
    |||||||||||||||||| |||||  ||||||||||||||| | ||||    ||| ||| |   |||||| |||||||||||||||||||||||||||||    
T  4511828 actccacctcaagttgagatttctgcacctcaacttccaaacgcgtacacatactctgcctttaccttgcaactccacctcaaaggttgatcacgagtat 4511927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 20344158 - 20344035
Alignment:
Q  53 cacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaacacaagatagaacaaggagagggaagatgaaaacaataaacac--aagagattg 150  Q
    |||||||||| ||||||||||||||||| |||||| |  |  ||| ||||||||| ||   |||||||||||| |||||||| || |||  |||||||||    
T  20344158 cacctagatctaatctaggaaacaagtgagaaacacaaaacacaatcacaagataaaa---ggagagggaagaagaaaacaa-aagcaccaaagagattg 20344063  T
Q  151 gtcacccagttcggtccaaacttgaccta 179  Q
     |||||||||||||||| |||||||||||    
T  20344062 ttcacccagttcggtcc-aacttgaccta 20344035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 39731573 - 39731507
Alignment:
Q  112 aaggagagggaagatgaaaacaataaacacaagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||||||||| |||||||| | |||| | |||||| ||||||||||||||||||||||||||||    
T  39731573 aaggagagggaagaggaaaacaa-agacaccaaagattgttcacccagttcggtccaaacttgaccta 39731507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 346 - 463
Target Start/End: Original strand, 44011447 - 44011565
Alignment:
Q  346 cttgcatccgatcacccttggcctttta-ggcaatcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccaca 444  Q
    ||||||||| ||||||||||  |||||| || |||| |||||||||    ||||||||||||| | |||||||||| |||||| ||||||||||| | |     
T  44011447 cttgcatccaatcacccttgatcttttatggtaatcccacaagccatgttatacattcttcaacctccggaataccttccatcttcatgaagaattccct 44011546  T
Q  445 tgctcaccactagagcata 463  Q
    ||||||| |||| ||||||    
T  44011547 tgctcacaactacagcata 44011565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 370
Target Start/End: Complemental strand, 43904 - 43852
Alignment:
Q  318 gaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctt 370  Q
    |||| |||||||| |||| |||||||||||||||||| |||||||||||||||    
T  43904 gaacatctcccgcttccttgaagatcaccttgcatccaatcacccttggcctt 43852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 16880660 - 16880716
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| |||||| |||||| ||||| || ||||||||||||||||||    
T  16880660 atttctccaccttgacttctaaattggtggtgatgtcaatttaaccatcaaccacca 16880716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 18409399 - 18409455
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||| ||||||| ||||||||||||| ||||| || ||||||||||||||||||    
T  18409399 atttctctaccttgacttctaatttggtggtgatgtcaatttaaccatcaaccacca 18409455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 24790047 - 24789979
Alignment:
Q  112 aaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||||||||| |||||  | | |||| ||||||||| ||||||||||||||||||||||||||||    
T  24790047 aaggagagggaagaagaaaaacaaagacaccaagagattgttcacccagttcggtccaaacttgaccta 24789979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 43504117 - 43504184
Alignment:
Q  112 aaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||||||||| |||||||| | |||| ||||||||| |||||||||||| |||||||||||||||    
T  43504117 aaggagagggaagaggaaaacaa-agacaccaagagattgttcacccagttcgatccaaacttgaccta 43504184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 372
Target Start/End: Complemental strand, 21679465 - 21679388
Alignment:
Q  294 ttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctttt 372  Q
    ||||||| | |||||||||| || |||| ||| |||| |||| |||| ||||||||||||| |||||||||||||||||    
T  21679465 ttcaccataacatcttcaac-acagaacatcttccgcttccttgaaggtcaccttgcatccaatcacccttggcctttt 21679388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Complemental strand, 35854090 - 35854052
Alignment:
Q  141 caagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  35854090 caagagattgttcacccagttcggtccaaacttgaccta 35854052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 318 - 367
Target Start/End: Original strand, 1047912 - 1047961
Alignment:
Q  318 gaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggc 367  Q
    |||| |||||||| |||| |||||||||||||||||| ||||||||||||    
T  1047912 gaacatctcccgcttccttgaagatcaccttgcatccaatcacccttggc 1047961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 393 - 490
Target Start/End: Original strand, 4509842 - 4509939
Alignment:
Q  393 ccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctccatagccgtacc 490  Q
    ||||||||||||| ||||||| ||| || ||  || ||||||||||| ||||||||||| |||||| ||||| | || || ||||| |||| ||||||    
T  4509842 ccatacattcttccaaccccgaaatgccttctgtcttcatgaagaattcacatgctcacaactagaacataagcacctaaggcctcaatagtcgtacc 4509939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 393 - 490
Target Start/End: Original strand, 4511684 - 4511781
Alignment:
Q  393 ccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctccatagccgtacc 490  Q
    ||||||||||||| ||||||| ||| || ||  || ||||||||||| ||||||||||| |||||| ||||| | || || ||||| |||| ||||||    
T  4511684 ccatacattcttccaaccccgaaatgccttctgtcttcatgaagaattcacatgctcacaactagaacataagcacctaaggcctcaatagtcgtacc 4511781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 9189499 - 9189444
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| |||||||| | |||||||| || ||||||||||||||||||    
T  9189499 atttctccaccttgacttctaatt-gatgatgatgtcagtttaaccatcaaccacca 9189444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 318 - 370
Target Start/End: Complemental strand, 20298644 - 20298592
Alignment:
Q  318 gaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctt 370  Q
    |||| |||||||| |||| |||||||||||||||||| ||||| |||||||||    
T  20298644 gaacatctcccgcttccttgaagatcaccttgcatccaatcactcttggcctt 20298592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 554
Target Start/End: Complemental strand, 38281368 - 38281328
Alignment:
Q  514 ctcaagttgagctttctctacctcaacttccaaatgagtac 554  Q
    |||||||||||||||||| ||||||||||||||||| ||||    
T  38281368 ctcaagttgagctttctccacctcaacttccaaatgtgtac 38281328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 554
Target Start/End: Complemental strand, 38395663 - 38395429
Alignment:
Q  323 tctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctttta----ggcaatcacacaagccactccatacattcttcaaaccccggaata 418  Q
    |||||||| |||| |||| || |||||||||| ||||  |||||||||||     || |||| ||||||||   | ||||||||||||| | |||||||     
T  38395663 tctcccgcttccttgaaggtctccttgcatccaatcatgcttggcctttttttagggtaatcccacaagccgtgctatacattcttcaacctccggaatg 38395564  T
Q  419 ccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaag-cctccatagccgtaccattcccggagtcaccaactccacctca 517  Q
    || ||| || ||||||||||  | | ||||||||| |||||||||  | ||||| | ||||||||| ||||||||| |||| ||   |||||||||||||    
T  38395563 ccttccgtcttcatgaagaaatcgcttgctcacca-tagagcatag-cacccaaggtcctccatagtcgtaccattaccggtgtgttcaactccacctca 38395466  T
Q  518 agttgagctttctctacctcaacttccaaatgagtac 554  Q
     | ||||| | | |||||||||||  |||||| ||||    
T  38395465 cgctgagcgtaccctacctcaactagcaaatgcgtac 38395429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 479 - 606
Target Start/End: Original strand, 7093229 - 7093359
Alignment:
Q  479 catagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttc-cactatg-cttccgccttgc 576  Q
    ||||| ||||||||| |||| ||   ||||||||||||| ||||||| | |||||||||||||  |||||| |||| || ||||||| ||||  |||||     
T  7093229 catagtcgtaccattaccggtgtgttcaactccacctcacgttgagcgtactctacctcaactagcaaatgcgtacatctcactatgtcttcaaccttga 7093328  T
Q  577 cactccacctcaa-aggttgatcacgagtat 606  Q
     |||||||||||| |||| ||||| ||||||    
T  7093329 aactccacctcaacaggtagatcatgagtat 7093359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 179
Target Start/End: Complemental strand, 23555212 - 23555178
Alignment:
Q  145 agattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||| ||||||||||||||||||||||||||||    
T  23555212 agattgttcacccagttcggtccaaacttgaccta 23555178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 141 - 179
Target Start/End: Original strand, 25766952 - 25766990
Alignment:
Q  141 caagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  25766952 caagagattgttcacccagttcggtctaaacttgaccta 25766990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 475 - 606
Target Start/End: Complemental strand, 28486788 - 28486654
Alignment:
Q  475 cctccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtac-ttccactatg-cttccgcc 572  Q
    ||||||||| ||||||||| |||| ||   ||||||||||||| | ||||| | |||||||||||||  |||||| |||| | |||||||| ||||  ||    
T  28486788 cctccatagtcgtaccattaccggtgtgttcaactccacctcacgctgagcgtactctacctcaactagcaaatgcgtacatcccactatgtcttcaacc 28486689  T
Q  573 ttgccactccacctcaa-aggttgatcacgagtat 606  Q
    |||  |||||||||||| |||| ||||| ||||||    
T  28486688 ttgaaactccacctcaacaggtagatcatgagtat 28486654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 179
Target Start/End: Complemental strand, 29991225 - 29991191
Alignment:
Q  145 agattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||| ||||||||||||||||||||||||||||    
T  29991225 agattgttcacccagttcggtccaaacttgaccta 29991191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 293 - 367
Target Start/End: Original strand, 31156885 - 31156958
Alignment:
Q  293 tttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggc 367  Q
    |||||||| | ||||||||||  | |||| ||||| || |||| |||||||||||||||||| ||||||||||||    
T  31156885 tttcaccataacatcttcaacg-cagaacatctcctgcttccttgaagatcaccttgcatccaatcacccttggc 31156958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 179
Target Start/End: Original strand, 34310712 - 34310746
Alignment:
Q  145 agattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||| ||||||||||||||||||||||||||||    
T  34310712 agattgttcacccagttcggtccaaacttgaccta 34310746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 366
Target Start/End: Original strand, 7350252 - 7350324
Alignment:
Q  293 tttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttgg 366  Q
    |||||||| | |||||||||| || |||| ||||| || |||| |||||||||||||||||| ||||| |||||    
T  7350252 tttcaccataacatcttcaac-acagaacatctcctgcttccttgaagatcaccttgcatccaatcactcttgg 7350324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 606
Target Start/End: Complemental strand, 20298502 - 20298369
Alignment:
Q  476 ctccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttc-cactatg-cttccgcct 573  Q
    |||||||| ||||||||| |||| ||   ||||||||||||| | ||||| | |||||||||||||  |||||| |||| || ||||||| ||||| |||    
T  20298502 ctccatagtcgtaccattaccggtgtgttcaactccacctcacgctgagcgtactctacctcaactagcaaatgcgtacatctcactatgtcttccacct 20298403  T
Q  574 tgccactccacctcaa-aggttgatcacgagtat 606  Q
    ||  ||||||| |||| |||| ||||| ||||||    
T  20298402 tgaaactccacatcaacaggtagatcatgagtat 20298369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 367
Target Start/End: Complemental strand, 22136468 - 22136419
Alignment:
Q  318 gaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggc 367  Q
    |||| ||| |||| |||| |||||||||||||||||| ||||||||||||    
T  22136468 gaacatcttccgcttccttgaagatcaccttgcatccaatcacccttggc 22136419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 367
Target Start/End: Complemental strand, 40551495 - 40551446
Alignment:
Q  318 gaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggc 367  Q
    |||| ||| |||| |||| |||||||||||||||||| ||||||||||||    
T  40551495 gaacatcttccgcttccttgaagatcaccttgcatccaatcacccttggc 40551446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 207 - 235
Target Start/End: Complemental strand, 38281793 - 38281765
Alignment:
Q  207 tgatgatgccactttaaccatcaaccacc 235  Q
    |||||||||||||||||||||||||||||    
T  38281793 tgatgatgccactttaaccatcaaccacc 38281765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 338; Significance: 0; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 180 - 606
Target Start/End: Complemental strand, 40381889 - 40381472
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttcccttgcatccaactctacaccaagttgctcc 279  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||    
T  40381889 atttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccc--ctttcttttcccttgcatccaactctacaccaagttgctcc 40381792  T
Q  280 acaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaat 379  Q
    |||||||||||       |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  40381791 acaagtcttca-------ccaaaccatcttcaactacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggtcttttaggcaat 40381699  T
Q  380 cacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctcc 479  Q
    |||||||| ||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40381698 cacacaagtcaccccatacattcttcaaaccccggaataccttccgtcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctcc 40381599  T
Q  480 atagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccac 579  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  40381598 atagccgtaacattcccggagttaccaactccacctcaagttgagctttctctgcctcaacttccaaatgcgtacttccactatgcttccgccttgccac 40381499  T
Q  580 tccacctcaaaggttgatcacgagtat 606  Q
    |||||||||||||||||||||||||||    
T  40381498 tccacctcaaaggttgatcacgagtat 40381472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 180 - 606
Target Start/End: Complemental strand, 16546216 - 16545796
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttcctttt-cccttgcatccaactctacaccaagttgctc 278  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  | ||| |||| |||||||||||||||||||||||||||||||    
T  16546216 atttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccccttttcttttttcccttgcatccaactctacaccaagttgctc 16546117  T
Q  279 cacaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaa 378  Q
    ||||||||||||       |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||    
T  16546116 cacaagtcttca-------ccaaaccatcttcaactacggaacgtctcccgcctccttgaagatcaccttgcatccgatcacctttggtcttttaggcaa 16546024  T
Q  379 tcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctc 478  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  16546023 tcacacaagccaccccaaacattcttcaaaccccggaataccttccgtcctcatgaagaattcacatgctcaccactagagcataaactcccaaagcccc 16545924  T
Q  479 catagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgcca 578  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16545923 catagccgtaccattcccggtgtcatcaactccacctcaagttgagctttcgctacctcaacttccaaatgagtacttccactatgcttccgccttgcca 16545824  T
Q  579 ctccacctcaaaggttgatcacgagtat 606  Q
    ||||||||||||||||||||||||||||    
T  16545823 ctccacctcaaaggttgatcacgagtat 16545796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 180 - 606
Target Start/End: Complemental strand, 29722152 - 29721727
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttcc------ttttcccttgcatccaactctacaccaagt 273  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||      ||||||||||||||||||| |||  |||||    
T  29722152 atttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccaatctccccttttgttttcccttgcatccaactatac--caagt 29722055  T
Q  274 tgctccacaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctttta 373  Q
    ||||||||||| || ||       |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||    
T  29722054 tgctccacaagactaca-------ccaaaccatcttcaaccacggaacgtctcccgtctcctcgaagatcaccttgcatccgatcacccttggtgtttta 29721962  T
Q  374 ggcaatcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcat-aaactcccaa 472  Q
    || ||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||| | ||||||||| |||||||||| ||||||||||    
T  29721961 ggtaatcacacaagccaccccatacattcttcaaaccccggaataccttccgtcctcatgaagaattcgcatgctcacaactagagcataaaactcccaa 29721862  T
Q  473 agcctccatagccgtacca-ttcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgc 571  Q
    ||||||||||| | ||||| || |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  29721861 agcctccatagtcataccattttccggtgtcatcaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccac 29721762  T
Q  572 cttgccactccacctcaaaggttgatcacgagtat 606  Q
     ||||||||||||||||||||||||||||||||||    
T  29721761 tttgccactccacctcaaaggttgatcacgagtat 29721727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 180 - 606
Target Start/End: Complemental strand, 16409077 - 16408654
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatc-----ttccttttcccttgcatccaactctacaccaagtt 274  Q
    ||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||     || |||||||||||||| ||||| |||  ||||||    
T  16409077 atttctccaccttgacttctaatttggtggtgatgtcactttaaccatcaaccaccaatcccccttttcttttcccttgcattcaactatac--caagtt 16408980  T
Q  275 gctccacaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctttt-a 373  Q
    |||||||||| || ||       |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |    
T  16408979 gctccacaagactaca-------ccaaaccaccttcaaccacggaacgtctcccgcttcctcgaagatcaccttgcatccgatcacccttggtcttttta 16408887  T
Q  374 ggcaatcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaa 473  Q
    || ||||||||||||||| ||||||||||||||||||||||| |||| ||| |||||||||||||| ||||||||||| |||||||||||||| ||||||    
T  16408886 ggtaatcacacaagccacaccatacattcttcaaaccccggagtaccttccgtcctcatgaagaattcacatgctcacaactagagcataaacacccaaa 16408787  T
Q  474 gcctccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgcct 573  Q
    | |||||||| | |||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  16408786 gtctccatagtcataccattcccggtgtcatcaactccaccttaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccacct 16408687  T
Q  574 tgccactccacctcaaaggttgatcacgagtat 606  Q
    |||||||||||||||||||||||||| ||||||    
T  16408686 tgccactccacctcaaaggttgatcatgagtat 16408654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 219 - 606
Target Start/End: Complemental strand, 26174517 - 26174134
Alignment:
Q  219 tttaaccatcaaccaccaatcttccttttc-----ccttgcatccaactctacaccaagttgctccacaagtcttcatttttcaccaaaccatcttcaac 313  Q
    |||||||||||||||||||||| |||||||     |||||||| ||||| |||  ||||||||||||||||||| ||       ||||||||||||||||    
T  26174517 tttaaccatcaaccaccaatctcccttttcttttcccttgcattcaactatac--caagttgctccacaagtctaca-------ccaaaccatcttcaac 26174427  T
Q  314 cacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaatcacacaagccactccatacattcttcaaaccccg 413  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||    
T  26174426 cacggaacgtctcccgcttcctcgaagatcaccttgcatccgatcacccttggtcttttaggtaatcacacaagccacaccatacattcttcaaaccccg 26174327  T
Q  414 gaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctccatagccgtaccattcccggagtcaccaactccac 513  Q
    ||||||| ||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||| |||| |||||||||    
T  26174326 gaataccttccgtcctcatgaagaattcacatgctcacaactagagcataaactcccaaagcctccatagtcataccattcccggtgtcatcaactccac 26174227  T
Q  514 ctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccactccacctcaaaggttgatcacgagtat 606  Q
    || |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26174226 cttaagttgagctttctctacctcaacttccaaatgagtacttgcactatgcttccaccttgccactccacctcaaaggttgatcacgagtat 26174134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 182 - 605
Target Start/End: Complemental strand, 13487796 - 13487380
Alignment:
Q  182 ttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttc----cttttcccttgcatccaactctacaccaagttgct 277  Q
    ||||||||||||| ||| |||| | ||||||||||||||||||||||||||||||||||||    ||||||| |||||||||| |  ||||||||| |||    
T  13487796 ttctccaccttgacttcaaatt-gatgatgatgccactttaaccatcaaccaccaatcttcttttcttttcctttgcatccaagt--acaccaagtagct 13487700  T
Q  278 ccacaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggca 377  Q
    |||||||| | ||       ||||||| |||||||||| |||||||||||| | | || |||||||||||||||  | ||||||||||| |||||||| |    
T  13487699 ccacaagtataca-------ccaaaccctcttcaaccatggaacgtctcccactttcttgaagatcaccttgcactcaatcacccttggtcttttaggta 13487607  T
Q  378 atcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcct 477  Q
    |||||||||| ||| ||||||||||||||||||||||||| || ||| |||||||||||||| ||||||||||| |||||||||| ||| ||||| ||||    
T  13487606 atcacacaagtcacaccatacattcttcaaaccccggaatgccttccgtcctcatgaagaattcacatgctcacaactagagcat-aacacccaaggcct 13487508  T
Q  478 ccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgcc 577  Q
    ||||||   |||||||| ||| |||  ||||||||||| ||||||| |||||||||||||||||||| |||| ||||   |||||||  | | ||||||     
T  13487507 ccatagttataccattctcggtgtcctcaactccaccttaagttgatctttctctacctcaacttccgaatgcgtacacacactatgtcttcaccttgct 13487408  T
Q  578 actccacctcaaaggttgatcacgagta 605  Q
    ||||||||||||||||||||||||||||    
T  13487407 actccacctcaaaggttgatcacgagta 13487380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 180 - 601
Target Start/End: Original strand, 42426825 - 42427243
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatc----ttccttttcccttgcatccaactctacaccaagttg 275  Q
    ||||||||||||||||||| |||| | |||||||||||||||||  |||||||||||||     || |||||||||||||||||  |||||||||||| |    
T  42426825 atttctccaccttgaattcaaatt-gatgatgatgccactttaagtatcaaccaccaattcctttttcttttcccttgcatcca--tctacaccaagtag 42426921  T
Q  276 ctccacaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttagg 375  Q
    || ||||||||| ||       ||||||| ||||||||||||||||||||||||  |||| |||||||||||||||||| ||||||||||| ||||||||    
T  42426922 cttcacaagtctaca-------ccaaaccctcttcaaccacggaacgtctcccgtttccttgaagatcaccttgcatccaatcacccttggtcttttagg 42427014  T
Q  376 caatcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagc 475  Q
     |||||||||||||||  |||| |||||||||||||| |||| || ||| || ||||||||||| |||||||||||  ||||||||||||| ||||| ||    
T  42427015 taatcacacaagccacatcatatattcttcaaaccccagaatgccttccgtcatcatgaagaattcacatgctcacagctagagcataaacacccaaggc 42427114  T
Q  476 ctccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttg 575  Q
    ||||||||  ||||||||| ||| |||| | |||||||||||||||||||||||||| ||||||||||||||||  ||||  || ||||||||  ||||     
T  42427115 ctccatagttgtaccattctcggtgtcatccactccacctcaagttgagctttctcttcctcaacttccaaatgcatactcacaatatgcttctaccttc 42427214  T
Q  576 cca---ctccacctcaaaggttgatcacg 601  Q
    | |   |||||||| ||||||||||||||    
T  42427215 caactcctccaccttaaaggttgatcacg 42427243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 296 - 605
Target Start/End: Complemental strand, 535399 - 535090
Alignment:
Q  296 caccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaatcacacaagccactcca 395  Q
    ||||||||| ||||||||||||||||||||||| | |||||||||||||| |||||||  ||||||||||| |||||||| ||||||||||||||| |||    
T  535399 caccaaaccctcttcaaccacggaacgtctcccacttcctcgaagatcacattgcatctaatcacccttggtcttttaggtaatcacacaagccacacca 535300  T
Q  396 tacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctccatagccgtaccattcc 495  Q
    |||||||||||||||||||||| || ||| ||| |||||||||| ||||||||||  |||||||||||||| ||||| ||||||||||  ||||||||||    
T  535299 tacattcttcaaaccccggaatgccttccgtccccatgaagaattcacatgctcataactagagcataaacacccaaggcctccatagttgtaccattcc 535200  T
Q  496 cggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccactccacctcaaaggttg 595  Q
    ||   ||  ||||||||||| ||||||||||||||||||||||||||||||||| ||||    ||||||| | | ||||||  |||||||||||||||||    
T  535199 cgatatcctcaactccaccttaagttgagctttctctacctcaacttccaaatgcgtacacatactatgccttcaccttgcacctccacctcaaaggttg 535100  T
Q  596 atcacgagta 605  Q
    ||||||||||    
T  535099 atcacgagta 535090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 16544727 - 16544547
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaac 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16544727 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacaccacctagatccaatctaggaaacaagtgtgaaacaaagcaactaaac 16544628  T
Q  100 acaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||| |  |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16544627 acaagataaacaaaggagagggaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgaccta 16544547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 16546949 - 16546769
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaac 99  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  16546949 gagtgataaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacaccacctaaatccaatctaggaaacaagtgtgaaacaaagcaactaaac 16546850  T
Q  100 acaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||| |  |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16546849 acaagataaacaaaggagagggaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgaccta 16546769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 25078437 - 25078259
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaa--acaaagcaaccaa 97  Q
    |||||||||||||| ||||||| |||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||  ||||||||| |||    
T  25078437 gagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagcaa-caa 25078339  T
Q  98 acacaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
     ||||||||   |||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  25078338 tcacaagat---acaaggagagggaagaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgaccta 25078259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 25136406 - 25136228
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaa--acaaagcaaccaa 97  Q
    |||||||||||||| ||||||| |||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||  ||||||||| |||    
T  25136406 gagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagcaa-caa 25136308  T
Q  98 acacaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
     ||||||||   |||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  25136307 tcacaagat---acaaggagagggaagaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgaccta 25136228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 40380407 - 40380229
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaac-aaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaaccaa 97  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||||| ||||||||||  ||||||||| |||    
T  40380407 gagtggtaaccaccaaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaa-caa 40380309  T
Q  98 acacaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
     ||||||||| ||||||  ||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  40380308 tcacaagata-aacaag--gagggaagaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgaccta 40380229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 40382618 - 40382440
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaac-aaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaaccaa 97  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||||| ||||||||||  ||||||||| |||    
T  40382618 gagtggtaaccaccaaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaa-caa 40382520  T
Q  98 acacaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
     ||||||||| ||||||  ||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  40382519 tcacaagata-aacaag--gagggaagaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgaccta 40382440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 10593574 - 10593396
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaa--acaaagcaaccaa 97  Q
    ||||||||||||||||||||||  ||||| |||||||| |||||||||| ||||||||||||| |||||||||||||||||||||  ||||||||  |||    
T  10593574 gagtggtaaccaccaaacaaagtgtattgtgcaagcaacaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagca--caa 10593477  T
Q  98 acacaagatagaacaaggagagggaagatgaaaac-aataaacacaagagattggtcacccagttcggtccaaacttgaccta 179  Q
     ||||||||| ||||||||||||||||  |||||| |||| || |||||||||| ||||||||||||||||||||||||||||    
T  10593476 tcacaagata-aacaaggagagggaagtagaaaacaaatacac-caagagattgttcacccagttcggtccaaacttgaccta 10593396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 445 - 606
Target Start/End: Complemental strand, 13295155 - 13294994
Alignment:
Q  445 tgctcaccactagagcataaactcccaaagcctccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttcc 544  Q
    ||||||| |||||||||||  | ||||| | |||||||| |||||||||   || |||| || |||||||||||| ||||||||||||||||||||||||    
T  13295155 tgctcacaactagagcatag-cacccaaggtctccatagtcgtaccatttttggtgtcatcatctccacctcaagctgagctttctctacctcaacttcc 13295057  T
Q  545 aaatgagtacttccactatg-cttccgccttgccactccacctcaaaggttgatcacgagtat 606  Q
    |||||||||||||||||||| ||| | |||||| |||||||||| |||| |||||||||||||    
T  13295056 aaatgagtacttccactatgtctttcaccttgcaactccacctctaaggctgatcacgagtat 13294994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 29720677 - 29720502
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaac 99  Q
    ||||||||||||||||||||||  | |  | ||||||| || ||||||| ||||||||||||| ||||||||||||||||| |||||| |  |  ||| |    
T  29720677 gagtggtaaccaccaaacaaagtgtgtgta-caagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgagaaacacaatacacaatc 29720579  T
Q  100 acaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||| ||   |||||||||||| |||||||| | |||| ||||||||| ||||||||||||||||||||||||||||    
T  29720578 acaagataaaa---ggagagggaagaagaaaacaa-agacaccaagagattgttcacccagttcggtccaaacttgaccta 29720502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 29751014 - 29751190
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaac 99  Q
    |||||||||||||||||||| |  | | | |||||||| || ||||||| ||||||||||||  ||||||| ||||||||| |||||| || |  ||| |    
T  29751014 gagtggtaaccaccaaacaatgtgtgt-gtgcaagcaataatcaacaaaacaccacctagatataatctagaaaacaagtgagaaacacagtacacaatc 29751112  T
Q  100 acaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||| ||   |||||||||||| |||||||| | |||| ||||||||| ||||||||||||||||||||||||||||    
T  29751113 acaagataaaa---ggagagggaagaagaaaacaaaagacaccaagagattgttcacccagttcggtccaaacttgaccta 29751190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 29722837 - 29722662
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaac 99  Q
    ||||||||||||||||||||||  | |  | ||||||| || ||||||| ||||||||||||| ||||||||||||||||| |||||| |  |  ||| |    
T  29722837 gagtggtaaccaccaaacaaagtgtgtgta-caagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgagaaacacaatacacaatc 29722739  T
Q  100 acaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||| ||   |||||||||||| |||||||| | |||| ||||||||| ||||||||||||||||||| ||||||||    
T  29722738 acaagataaaa---ggagagggaagaagaaaacaa-agacaccaagagattgttcacccagttcggtccaaatttgaccta 29722662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 500 - 606
Target Start/End: Original strand, 13693988 - 13694095
Alignment:
Q  500 gtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatg-cttccgccttgccactccacctcaaaggttgatc 598  Q
    ||||||||||| ||||||||||||||||||||||||| || ||| |||||  ||  ||||||||| ||| | |||||  |||||||||| ||||||||||    
T  13693988 gtcaccaactctacctcaagttgagctttctctacctaaaattcaaaatgcataaatccactatgactttcaccttgtaactccacctctaaggttgatc 13694087  T
Q  599 acgagtat 606  Q
    ||||||||    
T  13694088 acgagtat 13694095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 31 - 179
Target Start/End: Original strand, 22536175 - 22536320
Alignment:
Q  31 gcaagcaagaaacaacaaacaccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaacacaagatagaacaaggagagggaagatgaaa 130  Q
    |||||||| || ||||||| | |||||||||| ||||||||||||||||| |||||  |  |  ||| ||||||||| ||   || ||||||||| ||||    
T  22536175 gcaagcaacaatcaacaaaaaacacctagatctaatctaggaaacaagtgagaaactcaaaacacaatcacaagataaaa---ggggagggaagaagaaa 22536271  T
Q  131 acaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||| || ||| ||||||||| ||||||||||||||||||||||||||||    
T  22536272 acaa-aagcaccaagagattgttcacccagttcggtccaaacttgaccta 22536320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 179
Target Start/End: Original strand, 9789107 - 9789254
Alignment:
Q  31 gcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaacacaagatagaacaaggagagggaagatgaa 129  Q
    |||||||| || ||||||| || |||||||||| ||||||||||| |||||  ||||| |  |  ||| ||||||||| |||  |||||||||||| |||    
T  9789107 gcaagcaaaaatcaacaaaacagcacctagatctaatctaggaaagaagtgaaaaacacaatacacaagcacaagata-aac--ggagagggaagaggaa 9789203  T
Q  130 aacaataaacac--aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    ||||| | ||||  ||||||||| ||||||||||||||||||||||||||||    
T  9789204 aacaa-agacaccaaagagattgttcacccagttcggtccaaacttgaccta 9789254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 27445566 - 27445622
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| ||||||||||||| ||||| || ||||||||||||||||||    
T  27445566 atttctccaccttgacttctaatttggtggtgatgtcagtttaaccatcaaccacca 27445622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 28807076 - 28807020
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| ||||||||||||| ||||| || ||||||||||||||||||    
T  28807076 atttctccaccttgacttctaatttggtggtgatgtcagtttaaccatcaaccacca 28807020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 31401346 - 31401290
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| ||||||||||||| ||||| || ||||||||||||||||||    
T  31401346 atttctccaccttgacttctaatttggtggtgatgtcaatttaaccatcaaccacca 31401290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 37560947 - 37560891
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| ||||||||||||| ||||| || ||||||||||||||||||    
T  37560947 atttctccaccttgacttctaatttggtggtgatgtcaatttaaccatcaaccacca 37560891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 43592854 - 43592910
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| ||||||||||||| ||||| || ||||||||||||||||||    
T  43592854 atttctccaccttgacttctaatttggtggtgatgtcagtttaaccatcaaccacca 43592910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 43625648 - 43625704
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| ||||||||||||| ||||| || ||||||||||||||||||    
T  43625648 atttctccaccttgacttctaatttggtggtgatgtcagtttaaccatcaaccacca 43625704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 16409681 - 16409613
Alignment:
Q  112 aaggagagggaagatgaaaacaataaacac--aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||||||||| |||||||| | ||||  ||||||||| ||||||||||||||||||||||||||||    
T  16409681 aaggagagggaagaggaaaacaa-agacaccaaagagattgttcacccagttcggtccaaacttgaccta 16409613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 26170968 - 26170900
Alignment:
Q  112 aaggagagggaagatgaaaacaataaacac--aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||||||||| |||||||| | ||||  ||||||||| ||||||||||||||||||||||||||||    
T  26170968 aaggagagggaagaggaaaacaa-agacaccaaagagattgttcacccagttcggtccaaacttgaccta 26170900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 26178088 - 26178020
Alignment:
Q  112 aaggagagggaagatgaaaacaataaacac--aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||||||||| |||||||| | ||||  ||||||||| ||||||||||||||||||||||||||||    
T  26178088 aaggagagggaagaggaaaacaa-agacaccaaagagattgttcacccagttcggtccaaacttgaccta 26178020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 33768772 - 33768826
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccac 234  Q
    ||||||||||||||| ||||||||||||| ||||| || ||||||||||||||||    
T  33768772 atttctccaccttgacttctaatttggtggtgatgtcaatttaaccatcaaccac 33768826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 179
Target Start/End: Original strand, 18441612 - 18441678
Alignment:
Q  114 ggagagggaagatgaaaacaataaacac--aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||||||| |||||||| | ||||  ||||||||| ||||||||||||||||||||||||||||    
T  18441612 ggagagggaagaggaaaacaa-agacaccaaagagattgttcacccagttcggtccaaacttgaccta 18441678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 294 - 372
Target Start/End: Complemental strand, 659416 - 659339
Alignment:
Q  294 ttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctttt 372  Q
    ||||||| | |||||||||| || | || |||||||| |||| |||| || |||||||||| |||||||||||||||||    
T  659416 ttcaccataacatcttcaac-acaggacatctcccgcttccttgaaggtctccttgcatccaatcacccttggcctttt 659339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 179
Target Start/End: Complemental strand, 37439313 - 37439279
Alignment:
Q  145 agattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||| ||||||||||||||||||||||||||||    
T  37439313 agattgttcacccagttcggtccaaacttgaccta 37439279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 367
Target Start/End: Original strand, 15355476 - 15355525
Alignment:
Q  318 gaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggc 367  Q
    |||| |||||||| |||| |||||||||||||||||| ||||| ||||||    
T  15355476 gaacatctcccgcttccttgaagatcaccttgcatccaatcactcttggc 15355525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 372
Target Start/End: Original strand, 18510324 - 18510373
Alignment:
Q  323 tctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctttt 372  Q
    |||||||| |||| ||||||| |||||| ||| |||||||||||||||||    
T  18510324 tctcccgcttccttgaagatctccttgcctccaatcacccttggcctttt 18510373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 367
Target Start/End: Complemental strand, 23666698 - 23666649
Alignment:
Q  318 gaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggc 367  Q
    |||| |||||||| |||| |||||||||||||||||| ||||| ||||||    
T  23666698 gaacatctcccgcttccttgaagatcaccttgcatccaatcactcttggc 23666649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 367
Target Start/End: Complemental strand, 10756540 - 10756500
Alignment:
Q  327 ccgcctcctcgaagatcaccttgcatccgatcacccttggc 367  Q
    |||| |||| |||||||||||||||||| ||||||||||||    
T  10756540 ccgcttccttgaagatcaccttgcatccaatcacccttggc 10756500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 182 - 285
Target Start/End: Complemental strand, 18468697 - 18468598
Alignment:
Q  182 ttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttcccttgcatccaactctacaccaagttgctccac 281  Q
    ||||||||||||| | |||| || |||||||||||| |||||| |||||||||||  || |  |||||||||| ||| |||  ||||||||| |||||||    
T  18468697 ttctccaccttgact-ctaaattagtgatgatgccaatttaac-atcaaccaccatactgctctttcccttgcttcccact--acaccaagtagctccac 18468602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 182 - 285
Target Start/End: Original strand, 18509908 - 18510007
Alignment:
Q  182 ttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttcccttgcatccaactctacaccaagttgctccac 281  Q
    ||||||||||||| || ||| || |||||||||||| |||||| |||||||||||  || |  |||||||||| ||| |||  ||||||||| |||||||    
T  18509908 ttctccaccttgactt-taaattagtgatgatgccaatttaac-atcaaccaccatgctgctctttcccttgcttcccact--acaccaagtagctccac 18510003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 323 - 367
Target Start/End: Original strand, 34478048 - 34478092
Alignment:
Q  323 tctcccgcctcctcgaagatcaccttgcatccgatcacccttggc 367  Q
    ||||| || |||| |||||||||||||||||| ||||||||||||    
T  34478048 tctcctgcttccttgaagatcaccttgcatccaatcacccttggc 34478092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 277; Significance: 1e-155; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 182 - 606
Target Start/End: Original strand, 34254900 - 34255319
Alignment:
Q  182 ttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttc-----ccttgcatccaactctacaccaagttgc 276  Q
    ||||||||||||| ||| |||| | |||||||| ||||||||||||||||||||||||| |||||||     ||||||||||||||  ||||||||||||    
T  34254900 ttctccaccttgacttcaaatt-gatgatgatgtcactttaaccatcaaccaccaatctcccttttcttttcccttgcatccaact--acaccaagttgc 34254996  T
Q  277 tccacaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggc 376  Q
    ||||||||||| ||       ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||     
T  34254997 tccacaagtctaca-------ccaaaccatcttcaaccacggaacgtctcccgcttcctcgaagatcaccttgcatccgatcacccttggtcttttaggt 34255089  T
Q  377 aatcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcc 476  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||||||||||||| ||||| |||    
T  34255090 aatcacacaagccacaccatacattcttcaaaccccggaataccttccgtcctcatgaagaattcacatgctcacaactagagcataaacacccaaggcc 34255189  T
Q  477 tccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgc 576  Q
    ||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  34255190 tccatagtcgtaccattcccggtgtcatcaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccaccttgt 34255289  T
Q  577 cactccacctcaaaggttgatcacgagtat 606  Q
     |||||||||||||||||||||||||||||    
T  34255290 aactccacctcaaaggttgatcacgagtat 34255319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 182 - 605
Target Start/End: Complemental strand, 4733403 - 4732985
Alignment:
Q  182 ttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatc----ttccttttcccttgcatccaactctacaccaagttgct 277  Q
    ||||||||||||  ||| |||| | |||||||||||| |||||| ||||||||||||     || |||||||||  |||||||||  ||||||||| |||    
T  4733403 ttctccaccttggcttcaaatt-gatgatgatgccacattaaccttcaaccaccaattcccttttcttttccctgacatccaact--acaccaagtagct 4733307  T
Q  278 ccacaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggca 377  Q
     ||||||||| ||       ||||||| |||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||| |    
T  4733306 tcacaagtctaca-------ccaaaccctctttaaccacggaacgtctcccgcttccttgaagatcaccttgcatccgatcacccttggtcttttaggta 4733214  T
Q  378 atcacacaagccact-ccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcc 476  Q
    ||||||||| | ||| ||||||||||||||||||| |||||  | | ||||||||||||| || ||||||| ||| |||||||||||||| |||||  ||    
T  4733213 atcacacaaac-actgccatacattcttcaaacccgggaatgactttcatcctcatgaagcattcacatgcacacaactagagcataaacacccaagacc 4733115  T
Q  477 tccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgc-ttccgccttg 575  Q
    ||||||| |||||||||  ||| |||| |||||||||||||||||||| |||||||||||||| ||||||||| ||||   |||||||| |||  |||||    
T  4733114 tccatagtcgtaccattttcggtgtcatcaactccacctcaagttgagatttctctacctcaatttccaaatgcgtacacacactatgctttctcccttg 4733015  T
Q  576 ccactccacctcaaaggttgatcacgagta 605  Q
    | |||||||||||||||||||||| |||||    
T  4733014 caactccacctcaaaggttgatcatgagta 4732985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 42575177 - 42575354
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaac 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42575177 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacaccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaac 42575276  T
Q  100 acaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||   |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42575277 acaagat---acaaggagagggaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgaccta 42575354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 15290840 - 15290662
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaa-acaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaaccaa 97  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||  ||||||||| |||    
T  15290840 gagtggtaaccacctaacaaagcttattgagcaagcaagaaacaacaatacaccacctagatcgaatctaggaaccaagtgtgaaacacaaagcaa-caa 15290742  T
Q  98 acacaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
     ||||||||   |||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  15290741 tcacaagat---acaaggagagggaagaagaaaacaataaacacaaagagattggacacccagttcggtccaaacttgaccta 15290662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 15471209 - 15471031
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaa-acaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaaccaa 97  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||  ||||||||| |||    
T  15471209 gagtggtaaccacctaacaaagcttattgagcaagcaagaaacaacaatacaccacctagatcgaatctaggaaccaagtgtgaaacacaaagcaa-caa 15471111  T
Q  98 acacaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
     ||||||||   |||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  15471110 tcacaagat---acaaggagagggaagaagaaaacaataaacacaaagagattggacacccagttcggtccaaacttgaccta 15471031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 182 - 606
Target Start/End: Original strand, 41365408 - 41365826
Alignment:
Q  182 ttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttc------ccttgcatccaactctacaccaa-gtt 274  Q
    ||||||||||||  ||| |||| | |||||||||||||||||||||||| ||||||||  | |||||      ||||||||||||||  ||||||| ||     
T  41365408 ttctccaccttgccttcaaatt-gatgatgatgccactttaaccatcaatcaccaatcccctttttctttcttccttgcatccaact--acaccaaagta 41365504  T
Q  275 gctccacaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttag 374  Q
    ||||||||||| | ||       ||||||| ||||||| |||||||| ||||| || |||| |||||||| | ||||||| ||||| ||||| |||||||    
T  41365505 gctccacaagtataca-------ccaaaccttcttcaaacacggaacatctcctgcttccttgaagatcatcgtgcatccaatcactcttggtcttttag 41365597  T
Q  375 gcaatcacacaagccactccatacattcttcaaaccccggaataccatccatcctc---atgaagaatccacatgctcaccactagagcataaactccca 471  Q
    | |||||||| || ||  ||||||||||||||||| | |||||  | ||| || ||   ||||||||| | ||||||||| |||||||||||  | ||||    
T  41365598 gtaatcacactagtcataccatacattcttcaaactctggaatgtcttccgtcttcttcatgaagaattcccatgctcacaactagagcatag-caccca 41365696  T
Q  472 aagcctccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatg-cttccg 570  Q
    | |||||||||| | |||||||||||| |||| ||||||||||||||||||||||||      |||||||||||||||  |||   ||||||| |||  |    
T  41365697 aggcctccatagtcataccattcccggtgtcatcaactccacctcaagttgagcttt------ctcaacttccaaatgcatacacacactatgccttttg 41365790  T
Q  571 ccttgccactccacctcaaaggttgatcacgagtat 606  Q
    |||||| |||||||||||||||||||||||||||||    
T  41365791 ccttgcaactccacctcaaaggttgatcacgagtat 41365826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 301 - 606
Target Start/End: Original strand, 31574457 - 31574763
Alignment:
Q  301 aaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctttta-ggcaatcacacaagccactccataca 399  Q
    |||| ||||||||||||  |||||||| || |||| ||||||| |||||||||| ||||||||||  |||| | || |||| |||| ||||    |||||    
T  31574457 aaccctcttcaaccacgagacgtctcctgcttccttgaagatctccttgcatccaatcacccttgttctttaaaggtaatcccacatgccatgttataca 31574556  T
Q  400 ttcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctccatagccgtaccattcccgga 499  Q
    ||||||||||  |||||| || ||  || ||||||||||| | | | ||||  |||||||||||  | ||||| | |||||||| |||| ||||||||      
T  31574557 ttcttcaaacttcggaatgccttctgtcttcatgaagaattccctttctcataactagagcatag-cacccaaggtctccatagtcgtatcattcccgat 31574655  T
Q  500 gtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatg-cttccgccttgccactccacctcaaaggttgatc 598  Q
    ||||  ||||||||||||||||||||||||||||||||||||  |||||| |||| ||||| ||| ||| | |||||  ||||||||||||||| |||||    
T  31574656 gtcataaactccacctcaagttgagctttctctacctcaactagcaaatgcgtacatccacaatgactttcaccttgaaactccacctcaaaggctgatc 31574755  T
Q  599 acgagtat 606  Q
    ||||||||    
T  31574756 acgagtat 31574763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 25690269 - 25690092
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaac 99  Q
    ||||||||||||||||||||||  | | | ||||||||||| ||||||| ||||||||||||| ||||||||||||||||| |||||| |  |  ||  |    
T  25690269 gagtggtaaccaccaaacaaagtgtgt-gtgcaagcaagaatcaacaaaacaccacctagatctaatctaggaaacaagtgagaaacacaaaacacactc 25690171  T
Q  100 acaagatagaacaaggagagggaagatgaaaacaataaacac--aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||| ||   || ||||||||| |||||||| ||||||  ||||||||| ||||||||||||||||||||||||||||    
T  25690170 acaagataaaa---ggggagggaagaagaaaacaacaaacaccaaagagattgttcacccagttcggtccaaacttgaccta 25690092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 394 - 606
Target Start/End: Original strand, 42436230 - 42436428
Alignment:
Q  394 catacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctccatagccgtaccatt 493  Q
    |||||||||||||||||||  ||| || | | |||||||||||||| ||||||||||| |||||||||||| | ||||| |||             ||||    
T  42436230 catacattcttcaaaccccacaatgcctttcgtcctcatgaagaattcacatgctcacaactagagcataa-cacccaaggcc-------------catt 42436315  T
Q  494 cccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccactccacctcaaaggt 593  Q
    | | | |||| |||||||||||||| | ||||||||||||||||||||| |||||| |||| | || ||||| | | |||||| |||||||||||||| |    
T  42436316 ctctgtgtcatcaactccacctcaaatcgagctttctctacctcaactttcaaatgcgtacatacagtatgccttcaccttgcaactccacctcaaagat 42436415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 31 - 179
Target Start/End: Complemental strand, 3439788 - 3439641
Alignment:
Q  31 gcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaacacaagatagaacaaggagagggaagatgaa 129  Q
    |||||||| || ||||||| ||||||||||||| ||||||||||||||||| |||||  |  |  ||| ||||||||| ||   |||||||||||| |||    
T  3439788 gcaagcaacaatcaacaaaacaccacctagatctaatctaggaaacaagtgagaaactcaaaacacaatcacaagataaaa---ggagagggaagaagaa 3439692  T
Q  130 aacaataaacac--aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    ||||| || |||  ||||||||| ||| ||||||||||||||||||||||||    
T  3439691 aacaa-aagcaccaaagagattgttcatccagttcggtccaaacttgaccta 3439641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 294 - 541
Target Start/End: Complemental strand, 41384104 - 41383855
Alignment:
Q  294 ttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctttta----ggcaatcacacaagcc 389  Q
    ||||||| | |||||||||| || | || |||||||| |||| |||| ||||||||||||  || ||||||||||||||     || |||| | ||||||    
T  41384104 ttcaccataacatcttcaac-acaggacatctcccgcttccttgaaggtcaccttgcatcaaataacccttggcctttttttagggtaatcccgcaagcc 41384006  T
Q  390 actccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctccatagccgtac 489  Q
       | ||||||||||||| | ||||||| || ||| || ||||||||||  | | ||||||||| |||||||||   ||| |   |||||||||||||||    
T  41384005 gtgctatacattcttcaacctccggaatgccttccgtcttcatgaagaaatcccttgctcacca-tagagcatagcatccaaggtcctccatagccgtac 41383907  T
Q  490 cattcccggagtcaccaactccacctcaagttgagctttctctacctcaact 541  Q
    |||| |||| ||   ||||||||||||||| ||||| | |||||||||||||    
T  41383906 cattaccggtgtgttcaactccacctcaagatgagcgtactctacctcaact 41383855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 296 - 541
Target Start/End: Complemental strand, 17849332 - 17849089
Alignment:
Q  296 caccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaatcacacaagccactcca 395  Q
    ||||||||| |||||||||||  || ||||| | | |||| ||||||||||||| |||| |||| |||||| |||||||  ||||||||||| ||   ||    
T  17849332 caccaaaccctcttcaaccactaaa-gtctcacacttccttgaagatcaccttgtatccaatcatccttggtcttttagataatcacacaagtcatgtca 17849234  T
Q  396 tacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctccatagccgtaccattcc 495  Q
    |||||||||||||  ||| ||| || ||| || |  |||||||| | | |||| || |||||||| | | | ||||| | |||||||| | |||  |  |    
T  17849233 tacattcttcaaaatccgaaatgccttccgtctttttgaagaattctcttgctaacaactagagcct-agcacccaaggtctccatagtcatactttgtc 17849135  T
Q  496 cggagtcaccaactccacctcaagttgagctttctctacctcaact 541  Q
    |   |||| ||||||||||||||| |||||||||||||||||||||    
T  17849134 caatgtcatcaactccacctcaaggtgagctttctctacctcaact 17849089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 10688618 - 10688562
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| ||||||||||||| ||||| || ||||||||||||||||||    
T  10688618 atttctccaccttgacttctaatttggtggtgatgtcagtttaaccatcaaccacca 10688562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 33037287 - 33037231
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| ||||||||||||| ||||| || ||||||||||||||||||    
T  33037287 atttctccaccttgacttctaatttggtggtgatgtcagtttaaccatcaaccacca 33037231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 48 - 179
Target Start/End: Complemental strand, 2628002 - 2627874
Alignment:
Q  48 aacaccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaacacaagatagaacaaggagagggaagatgaaaacaataaacac-aagag 146  Q
    |||| |||||||||| |||||||||||||||||  || || |  |  ||| ||||||||| ||   |||||||||||| |||||||| | |||| |||||    
T  2628002 aacaacacctagatctaatctaggaaacaagtgaaaagcataaaacacaagcacaagataaaa---ggagagggaagaggaaaacaa-agacaccaagag 2627907  T
Q  147 attggtcacccagttcggtccaaacttgaccta 179  Q
    |||  ||||||||||||||||||||||||||||    
T  2627906 attattcacccagttcggtccaaacttgaccta 2627874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 35741124 - 35741176
Alignment:
Q  182 ttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccac 234  Q
    ||||||||||||| ||||||||||||| ||||| || ||||||||||||||||    
T  35741124 ttctccaccttgacttctaatttggtggtgatgtcaatttaaccatcaaccac 35741176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 367
Target Start/End: Complemental strand, 43081336 - 43081263
Alignment:
Q  293 tttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggc 367  Q
    |||||||| | |||||||||| || |||| ||||| || |||| |||||||||||||||||| ||||||||||||    
T  43081336 tttcaccataacatcttcaac-acagaacatctcctgcttccttgaagatcaccttgcatccaatcacccttggc 43081263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 19751888 - 19751833
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| |||||||| ||||| |||| || ||||||||||||||||||    
T  19751888 atttctccaccttgacttctaatt-ggtgacgatgtcagtttaaccatcaaccacca 19751833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 323 - 375
Target Start/End: Complemental strand, 21481900 - 21481848
Alignment:
Q  323 tctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttagg 375  Q
    |||||||| |||| ||||||| |||||||||| |||||||||||| |||||||    
T  21481900 tctcccgcttccttgaagatctccttgcatccaatcacccttggctttttagg 21481848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 342
Target Start/End: Complemental strand, 5646040 - 5645994
Alignment:
Q  296 caccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagat 342  Q
    ||||||||| ||||||||||| ||||||||||||| |||| ||||||    
T  5646040 caccaaaccctcttcaaccacagaacgtctcccgcttccttgaagat 5645994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 179
Target Start/End: Complemental strand, 17982825 - 17982791
Alignment:
Q  145 agattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||| ||||||||||||||||||||||||||||    
T  17982825 agattgttcacccagttcggtccaaacttgaccta 17982791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 412
Target Start/End: Original strand, 29797062 - 29797175
Alignment:
Q  296 caccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaatcacacaagccactcca 395  Q
    ||||| ||| |||||||||| ||||||||| ||| ||    ||||||  |||||||| | || ||| |||| |||||||| |||| |||||| || ||||    
T  29797062 caccataccctcttcaaccatggaacgtcttccgtctt---gaagatttccttgcatgcaattaccattggtcttttaggtaatcccacaagtcattcca 29797158  T
Q  396 tacattcttcaaacccc 412  Q
    ||||||| |||||||||    
T  29797159 tacattcctcaaacccc 29797175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 179
Target Start/End: Complemental strand, 31218429 - 31218395
Alignment:
Q  145 agattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||| ||||||||||||||||||||||||||||    
T  31218429 agattgttcacccagttcggtccaaacttgaccta 31218395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 179
Target Start/End: Original strand, 34254327 - 34254361
Alignment:
Q  145 agattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||| ||||||||||||||||||||||||||||    
T  34254327 agattgttcacccagttcggtccaaacttgaccta 34254361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 179
Target Start/End: Original strand, 34256503 - 34256537
Alignment:
Q  145 agattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||| ||||||||||||||||||||||||||||    
T  34256503 agattgttcacccagttcggtccaaacttgaccta 34256537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 179
Target Start/End: Complemental strand, 42498366 - 42498332
Alignment:
Q  145 agattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||| ||||||||||||||||||||||||||||    
T  42498366 agattgttcacccagttcggtccaaacttgaccta 42498332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 179
Target Start/End: Original strand, 1746216 - 1746249
Alignment:
Q  146 gattggtcacccagttcggtccaaacttgaccta 179  Q
    ||||| ||||||||||||||||||||||||||||    
T  1746216 gattgttcacccagttcggtccaaacttgaccta 1746249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 483
Target Start/End: Original strand, 40220644 - 40220728
Alignment:
Q  398 cattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctccatag 483  Q
    |||||||||| ||||| ||| || | | | ||| |||||||| ||||||||||| |||||||||| ||| ||||| ||||||||||    
T  40220644 cattcttcaacccccgaaatgcctttcgtactcttgaagaattcacatgctcacaactagagcat-aacacccaaggcctccatag 40220728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 367
Target Start/End: Complemental strand, 27828687 - 27828647
Alignment:
Q  327 ccgcctcctcgaagatcaccttgcatccgatcacccttggc 367  Q
    |||| |||| |||||||||||||||||| ||||||||||||    
T  27828687 ccgcttccttgaagatcaccttgcatccaatcacccttggc 27828647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 255; Significance: 1e-141; HSPs: 3)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 180 - 606
Target Start/End: Original strand, 9308 - 9730
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatc-----ttccttttcccttgcatccaactctacaccaagtt 274  Q
    ||||||||||||||| |||||||||| || ||||| ||||||||||||||||||||||||     || |||||||||||||| ||||| |||  ||||||    
T  9308 atttctccaccttgacttctaatttgatggtgatgtcactttaaccatcaaccaccaatcccccttttcttttcccttgcattcaactatac--caagtt 9405  T
Q  275 gctccacaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttag 374  Q
    |||||||||| || ||       ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||  |||||||    
T  9406 gctccacaagactaca-------ccaaaccatcttcaaccacggaacgtctcccgcttcctcgaggatcaccttgcatccgatcacccttgatcttttag 9498  T
Q  375 gcaatcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaag 474  Q
    | ||||||||||||||| | ||||||||||||||||||| |||||| ||| |||||||||||||| ||||||||||| |||||||||||||| |||||||    
T  9499 gtaatcacacaagccacacaatacattcttcaaaccccgaaataccttccgtcctcatgaagaattcacatgctcacaactagagcataaacacccaaag 9598  T
Q  475 cctccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgcctt 574  Q
    ||||||||| | |||||||| ||| |||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  9599 cctccatagtcataccattctcggtgtcatcaactccacatcaagttgagctttctctacctcaactttcaaatgagtacttccactatgcttccacctt 9698  T
Q  575 gccactccacctcaaaggttgatcacgagtat 606  Q
    ||||||||||||||||||||||||||||||||    
T  9699 gccactccacctcaaaggttgatcacgagtat 9730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 11125 - 11191
Alignment:
Q  112 aaggagagggaagatgaaaacaataaacacaagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||||||||| |||||||| | |||| | |||||| ||||||||||||||||||||||||||||    
T  11125 aaggagagggaagaggaaaacaa-agacaccaaagattgttcacccagttcggtccaaacttgaccta 11191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 116 - 179
Target Start/End: Original strand, 8703 - 8765
Alignment:
Q  116 agagggaagatgaaaacaataaacacaagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||||| |||||||| | |||| | |||||| ||||||||||||||||||||||||||||    
T  8703 agagggaagaggaaaacaa-agacaccaaagattgttcacccagttcggtccaaacttgaccta 8765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 189; Significance: 1e-102; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 180 - 606
Target Start/End: Complemental strand, 776847 - 776427
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttc----ccttgcatccaactctacaccaagttg 275  Q
    ||||||||||||||| | |||| ||| || |||||  |||||||||||||||||||| ||| | ||| |    ||||||||||||||  ||||||||| |    
T  776847 atttctccaccttgact-ctaaattgatggtgatggaactttaaccatcaaccaccattctccttttgcatttccttgcatccaact--acaccaagtag 776751  T
Q  276 ctccacaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttagg 375  Q
    |||||||||||| ||       |||||   ||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||||    
T  776750 ctccacaagtctaca-------ccaaaatctcttcaaccacggaacgtctcccgcttccttgaagatcaccttgcatccaatcacccttggtcttttagg 776658  T
Q  376 caatcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagc 475  Q
     ||||||||||||||| ||||||| ||||||||||||||||| || ||| |||||||||||||| ||||||||||| |||||||||||||| ||||| ||    
T  776657 taatcacacaagccacaccatacagtcttcaaaccccggaatgccttccgtcctcatgaagaattcacatgctcacaactagagcataaacacccaaggc 776558  T
Q  476 ctccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttg 575  Q
    ||||||||  |||||||| |||| || | |||||||||||||||||||||||| |||||||||||||||||||| |||    |||||||| | | |||||    
T  776557 ctccatagtggtaccatttccggtgttatcaactccacctcaagttgagctttatctacctcaacttccaaatgcgtatacacactatgccttcaccttg 776458  T
Q  576 ccactccacctcaaaggttgatcacgagtat 606  Q
    | |||||||||||||||||||||||||||||    
T  776457 caactccacctcaaaggttgatcacgagtat 776427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 219 - 605
Target Start/End: Original strand, 28221484 - 28221865
Alignment:
Q  219 tttaaccatcaaccacca--atc--ttccttttcccttgcatccaactctacaccaagttgctccacaagtcttcatttttcaccaaaccatcttcaacc 314  Q
    ||||||||||||||||||  |||  || ||||||||||||||||||||  ||||||||| ||||||||||| | ||       ||||||| |||| ||||    
T  28221484 tttaaccatcaaccaccatgatccttttcttttcccttgcatccaact--acaccaagtagctccacaagtataca-------ccaaaccctctttaacc 28221574  T
Q  315 acggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaatcacacaagccactccatacattcttcaaaccccgg 414  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||| | ||||||| |||||||||||     
T  28221575 acggaacgtctcccgcttccttgaagatcaccttgcatccaatcacccttggtcttttaggtaatcacacaagtcacacaatacattattcaaaccccgt 28221674  T
Q  415 aataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctccatagccgtaccattcccggagtcaccaactccacc 514  Q
    ||| || ||  |||||||||||||| ||||||||||| |||||||||||||| || || ||||||||||   |||||||||||| |||| ||||||||||    
T  28221675 aatgccttctgtcctcatgaagaattcacatgctcacaactagagcataaacaccaaaggcctccatagttataccattcccggtgtcatcaactccacc 28221774  T
Q  515 tcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccactccacctcaaaggttgatcacgagta 605  Q
    |||||||||||||||||||||||||||||||||||  |||   |||||||| | | |||||| ||||||||||||||||||||||||||||    
T  28221775 tcaagttgagctttctctacctcaacttccaaatgcatacacacactatgccttcaccttgcaactccacctcaaaggttgatcacgagta 28221865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 306 - 606
Target Start/End: Original strand, 50167864 - 50168164
Alignment:
Q  306 tcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaatcacacaagccactccatacattcttc 405  Q
    ||||||||||||||||||||||||| |||| ||| |||||||||||||| || |||||||| |||||||| ||||||||||||||   |||||||| |||    
T  50167864 tcttcaaccacggaacgtctcccgcttccttgaatatcaccttgcatccaataacccttggtcttttaggtaatcacacaagccatatcatacatttttc 50167963  T
Q  406 aaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctccatagccgtaccattcccggagtcacc 505  Q
    |||||||||||| || | | |||||||||||||| ||||||||||| |||||||||||||| ||||| |||||||||| ||||||||| |||| |||| |    
T  50167964 aaaccccggaatgcctttcgtcctcatgaagaattcacatgctcacaactagagcataaacacccaaggcctccatagtcgtaccatttccggtgtcatc 50168063  T
Q  506 aactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccactccacctcaaaggttgatcacgagta 605  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||   |||||||| | | |||||| ||||||||||||||||||||||||||||    
T  50168064 aactccacctcaagttgagttttctctacctcaacttccaaatgtgtacacacactatgccttcaccttgcaactccacctcaaaggttgatcacgagta 50168163  T
Q  606 t 606  Q
    |    
T  50168164 t 50168164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 306 - 605
Target Start/End: Original strand, 13548197 - 13548495
Alignment:
Q  306 tcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaatcacacaagccactccatacattcttc 405  Q
    |||||||||| |||||||||||||| |||| |||||||| ||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||    
T  13548197 tcttcaaccatggaacgtctcccgcttccttgaagatcatcttgcatccgatcacccttggtcttttaggtaatcacacaagccacaccatacattcttc 13548296  T
Q  406 aaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctccatagccgtaccattcccggagtcacc 505  Q
    |||||||||||| || ||| |||||||||||||| ||||||||||| |||||| ||| | | | ||| ||||||||||  ||||||||||||| |||| |    
T  13548297 aaaccccggaatgccttccgtcctcatgaagaattcacatgctcacaactagaacat-agcactcaaggcctccatagttgtaccattcccggtgtcatc 13548395  T
Q  506 aactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccactccacctcaaaggttgatcacgagta 605  Q
    |||||||||| |||||||||||||||||||| |||||||||||| ||||   |||||||| | | |||||| ||||||||||||||||||||||||||||    
T  13548396 aactccaccttaagttgagctttctctaccttaacttccaaatgcgtacacacactatgccttcaccttgcaactccacctcaaaggttgatcacgagta 13548495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 296 - 605
Target Start/End: Original strand, 28221927 - 28222236
Alignment:
Q  296 caccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaatcacacaagccactcca 395  Q
    ||||||||| |||| ||||| |||||||||||| | |||| |||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||| | |    
T  28221927 caccaaaccctctttaaccatggaacgtctcccacttccttgaagatcaccttgcatccaatcacccttggtcttttaggtaatcacacaagtcacacta 28222026  T
Q  396 tacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctccatagccgtaccattcc 495  Q
    |||||| |||||||||||||||  | ||  |||||||||||||| ||||||||||| |||||||||||||| || || ||||||||||   |||||||||    
T  28222027 tacattattcaaaccccggaatggcttctgtcctcatgaagaattcacatgctcacaactagagcataaacacctaaggcctccatagttataccattcc 28222126  T
Q  496 cggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccactccacctcaaaggttg 595  Q
    ||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||   |||||||| | | |||||| ||||||||||||||||||    
T  28222127 cggtgtcatcaactccacctcaagttgagctttctctacctcaacttccaaatgcgtacacacactatgccttcaccttgcaactccacctcaaaggttg 28222226  T
Q  596 atcacgagta 605  Q
    ||||||||||    
T  28222227 atcacgagta 28222236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 397 - 606
Target Start/End: Complemental strand, 28243147 - 28242939
Alignment:
Q  397 acattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctccatagccgtaccattccc 496  Q
    |||||||||||||| |||||| |  ||| |||||||| ||||| ||||||||||| | |||||||||| | |||||  ||||||||| ||||||||||||    
T  28243147 acattcttcaaaccacggaatgctttccgtcctcatggagaattcacatgctcacaaatagagcataa-cacccaatacctccatagtcgtaccattccc 28243049  T
Q  497 ggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccactccacctcaaaggttga 596  Q
    || ||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||   |||||||||| | ||||||||||||||||||||||||||    
T  28243048 ggtgtcactaactccacctctagttgagctttctctacctcaacttccaaatgtgtacacacactatgctttcaccttgccactccacctcaaaggttga 28242949  T
Q  597 tcacgagtat 606  Q
    ||||||||||    
T  28242948 tcacgagtat 28242939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 44203948 - 44203770
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaac-aaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaaccaa 97  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||  ||||||||| |||    
T  44203948 gagtggtaaccaccaaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagcaa-caa 44203850  T
Q  98 acacaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
     ||||||||   |||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  44203849 tcacaagat---acaaggagagggaagaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgaccta 44203770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 441 - 605
Target Start/End: Complemental strand, 31658660 - 31658497
Alignment:
Q  441 cacatgctcaccactagagcataaactcccaaagcctccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaac 540  Q
    ||||||||||| |||||||||||||| ||||| |||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  31658660 cacatgctcacaactagagcataaacacccaaggcctccatagtcgtaccattcccggtgtcatcaactccacctcaagttgagctttctctacctcaac 31658561  T
Q  541 ttccaaatgagtacttccactatgcttccgccttgccactccacctcaaaggttgatcacgagta 605  Q
     ||||||||  |||   ||| |||| | | |||||| ||||||||||||||| ||||||||||||    
T  31658560 gtccaaatgcttacacacaccatgccttcaccttgcaactccacctcaaagg-tgatcacgagta 31658497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 9036731 - 9036554
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaa--acaaagcaaccaa 97  Q
    ||||||||||||||||||||||  | ||| |||||||| |||||||||| ||||||||||||| |||||||||||||||||||||  ||||||||  |||    
T  9036731 gagtggtaaccaccaaacaaagtgt-ttgtgcaagcaacaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagca--caa 9036635  T
Q  98 acacaagatagaacaaggagagggaagatgaaaac-aataaacacaagagattggtcacccagttcggtccaaacttgaccta 179  Q
     ||||||||| ||||||||||||||||| |||||| |||| || |||||||||| ||||||||||||||||||||||||||||    
T  9036634 tcacaagata-aacaaggagagggaagaagaaaacaaatacac-caagagattgttcacccagttcggtccaaacttgaccta 9036554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 397 - 606
Target Start/End: Original strand, 31928880 - 31929087
Alignment:
Q  397 acattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctccatagccgtaccattccc 496  Q
    ||||||||||| ||||| |||  | | | ||||| |||||||| | | ||||||| |||||||||||  | ||||| | |||||||| |||||||||||     
T  31928880 acattcttcaacccccgaaatgtctttcgtcctcttgaagaattctcttgctcacaactagagcatat-cacccaaggtctccatagtcgtaccattcct 31928978  T
Q  497 ggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccactccacctcaaaggttga 596  Q
    || ||||||||||||||||||||| || ||||||||||||||||||||||||  ||||   |||||||| | | |||||| |||||||||||||||||||    
T  31928979 ggtgtcaccaactccacctcaagtcgaactttctctacctcaacttccaaat-cgtacacacactatgcattcaccttgcaactccacctcaaaggttga 31929077  T
Q  597 tcacgagtat 606  Q
    ||||||||||    
T  31929078 tcacgagtat 31929087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 31 - 179
Target Start/End: Complemental strand, 21054242 - 21054096
Alignment:
Q  31 gcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaacacaagatagaacaaggagagggaagatgaa 129  Q
    |||||||| || ||||||| ||||||||||||| ||||||||||||||||| |||||| |  |  ||| ||||||||| ||   |||||||||||| |||    
T  21054242 gcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgagaaacacaatacacaatcacaagataaaa---ggagagggaagaagaa 21054146  T
Q  130 aacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    ||||| | |||| ||||||||||||||||||||||||||||||||||||||    
T  21054145 aacaa-atacaccaagagattggtcacccagttcggtccaaacttgaccta 21054096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 393 - 490
Target Start/End: Complemental strand, 19753535 - 19753438
Alignment:
Q  393 ccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctccatagccgtacc 490  Q
    ||||||||||||||||||||| ||| || ||| |||||||||||||| ||||||||||| |||||||||||| | ||||| |||||||||| ||||||    
T  19753535 ccatacattcttcaaaccccgaaatgccttccgtcctcatgaagaattcacatgctcacaactagagcataagcacccaaggcctccatagtcgtacc 19753438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 6 - 179
Target Start/End: Original strand, 20622097 - 20622267
Alignment:
Q  6 gtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaacacaag 104  Q
    |||||||||||||||||  | | | |||||||| || ||||||| ||||||||||||| ||||||||||||||||| |||||| |  |  ||| ||||||    
T  20622097 gtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgagaaacacaatacacaatcacaag 20622195  T
Q  105 atagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    ||| ||   |||||||||||| |||||||| | |||| ||||||||| ||||||||||||||||||||||||||||    
T  20622196 ataaaa---ggagagggaagaagaaaacaa-agacaccaagagattgttcacccagttcggtccaaacttgaccta 20622267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 31 - 179
Target Start/End: Complemental strand, 9987486 - 9987339
Alignment:
Q  31 gcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaacacaagatagaacaaggagagggaagatgaa 129  Q
    |||||||| || ||||||| ||||||||||||| ||||||||||||||||| ||||||    |  ||| ||||||||| ||   |||||||||||| |||    
T  9987486 gcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgagaaacactatacacaatcacaagataaaa---ggagagggaagaagaa 9987390  T
Q  130 aacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    ||||| | |||| ||||||||| ||||||||||||||||||||||||||||    
T  9987389 aacaaaagacaccaagagattgttcacccagttcggtccaaacttgaccta 9987339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 31 - 179
Target Start/End: Complemental strand, 40282661 - 40282515
Alignment:
Q  31 gcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaacacaagatagaacaaggagagggaagatgaa 129  Q
    |||||||| || ||||||| ||||||||||||| ||||||||||||||||| |||||| |  |  ||| ||||||||| ||   |||||||||||| |||    
T  40282661 gcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgagaaacacaatacacaatcacaagataaaa---ggagagggaagaagaa 40282565  T
Q  130 aacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    ||||| | |||| ||||||||| ||||||||||||||||||||||||||||    
T  40282564 aacaa-agacaccaagagattgttcacccagttcggtccaaacttgaccta 40282515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 306 - 606
Target Start/End: Original strand, 13126300 - 13126600
Alignment:
Q  306 tcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttag-gcaatcacacaagccactccatacattctt 404  Q
    |||||||||||||||| |||||| | |||| ||||||| |||||||||  |||||||||||  |||||| | |||| |||||||||  | |||| |||||    
T  13126300 tcttcaaccacggaacatctccc-cttccttgaagatctccttgcatctaatcacccttggttttttagcgtaatcccacaagccatgctatactttctt 13126398  T
Q  405 caaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaag-cctccatagccgtaccattcccggagtca 503  Q
    |||||  |||||| || |   || |||||||||||   | ||||||| ||||||||||||   | ||| | |||| |||| |||||||||  | | ||      
T  13126399 caaacttcggaatgccttttgtcttcatgaagaatttccttgctcacaactagagcataa---cacaaggtcctctatagtcgtaccattttcagtgtgt 13126495  T
Q  504 ccaactccacctcaagttgagctttctctacctcaacttccaaatgagtac-ttccactatg-cttccgccttgccactccacctcaaaggttgatcacg 601  Q
     |||||||||||| || ||||||||||||||||||||||||||||| |||| | |||||||| ||||| |||||  ||||||||| |||||| ||| ||     
T  13126496 tcaactccacctctagctgagctttctctacctcaacttccaaatgcgtacatcccactatgtcttccaccttgaaactccaccttaaaggtagattaca 13126595  T
Q  602 agtat 606  Q
    |||||    
T  13126596 agtat 13126600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 207 - 345
Target Start/End: Complemental strand, 31658791 - 31658658
Alignment:
Q  207 tgatgatgccactttaaccatcaaccaccaatcttccttttc----ccttgcatccaactctacaccaagttgctccacaagtcttcatttttcaccaaa 302  Q
    |||||||| ||||||||||||||||||||||||  |||||||    ||||||||||||||  ||||||||| ||| || |||||| ||       |||||    
T  31658791 tgatgatgtcactttaaccatcaaccaccaatcccccttttcttttccttgcatccaact--acaccaagtagcttcagaagtctaca-------ccaaa 31658701  T
Q  303 ccatcttcaaccacggaacgtctcccgcctcctcgaagatcac 345  Q
    || |||||||||||||||||||||| || |||| |||||||||    
T  31658700 ccctcttcaaccacggaacgtctcctgcttccttgaagatcac 31658658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 25444592 - 25444536
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| ||||||||||||| ||||| || ||||||||||||||||||    
T  25444592 atttctccaccttgacttctaatttggtggtgatgtcagtttaaccatcaaccacca 25444536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 41391185 - 41391241
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| ||||||||||||| ||||| || ||||||||||||||||||    
T  41391185 atttctccaccttgacttctaatttggtggtgatgtcagtttaaccatcaaccacca 41391241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 606
Target Start/End: Original strand, 14098807 - 14099124
Alignment:
Q  294 ttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctttt----aggcaatcacacaagcc 389  Q
    ||||||| | |||||||||| || | || |||||||| |||| |||| || |||||||||| |||||||||||||||||     || |||| | ||||||    
T  14098807 ttcaccataacatcttcaac-acaggacatctcccgcttccttgaaggtctccttgcatccaatcacccttggcctttttttagggtaatcccgcaagcc 14098905  T
Q  390 actccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaag-cctccatagccgta 488  Q
    |  | ||||||||||||| | || |||| || ||| || ||||||||||  | | ||||||||| |||||||| ||| ||||| | ||||||||| | ||    
T  14098906 atgctatacattcttcaacctccagaatgccttccgtcttcatgaagaaatcccttgctcacca-tagagcat-aacacccaaggtcctccatagacata 14099003  T
Q  489 ccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtac-ttccactatg-cttccgccttgccactccacct 586  Q
    ||||| |||| ||   ||||||||||||| | ||||| | |||| ||||||||  |||||| |||| | |||||||| ||||  |||||  |||||||||    
T  14099004 ccattaccggtgtgttcaactccacctcacgctgagcgtactctgcctcaactagcaaatgtgtacatcccactatgtcttcaaccttgaaactccacct 14099103  T
Q  587 caa-aggttgatcacgagtat 606  Q
    ||| |||| ||||| ||||||    
T  14099104 caacaggtagatcatgagtat 14099124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 527
Target Start/End: Complemental strand, 16430316 - 16430108
Alignment:
Q  323 tctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctttt----aggcaatcacacaagccactccatacattcttcaaaccccggaata 418  Q
    |||||||| |||| ||||||| |||||||||| |||||||||||||||||     || |||| | ||||||   | ||||||||| ||| |  ||||||     
T  16430316 tctcccgcttccttgaagatctccttgcatccaatcacccttggcctttttttagggtaatcccgcaagccgtgctatacattctccaaccttcggaatg 16430217  T
Q  419 ccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctccatagccgtaccattcccggagtcaccaactccacctcaa 518  Q
    || ||| || ||||||||||  | | ||||||||||||||||||||  ||| |   ||||||||||||||||||| | || ||   ||||||||||| ||    
T  16430216 ccttccgtcttcatgaagaaatcccttgctcaccactagagcataacatccaaggtcctccatagccgtaccattactggtgtgttcaactccaccttaa 16430117  T
Q  519 gttgagctt 527  Q
    | |||||||    
T  16430116 gctgagctt 16430108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 507 - 606
Target Start/End: Complemental strand, 19753391 - 19753292
Alignment:
Q  507 actccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccactccacctcaaaggttgatcacgagtat 606  Q
    ||||||||||||| |||  |||||| ||||||||||||||| | ||||    ||||||| | | |||||| ||||||||| |||||||||||||||||||    
T  19753391 actccacctcaagctgatatttctccacctcaacttccaaacgcgtacacatactatgccttcaccttgcaactccacctaaaaggttgatcacgagtat 19753292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 323 - 372
Target Start/End: Original strand, 31423946 - 31423995
Alignment:
Q  323 tctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctttt 372  Q
    |||||||| |||| |||||||||||||||||| |||||||||||||||||    
T  31423946 tctcccgcttccttgaagatcaccttgcatccaatcacccttggcctttt 31423995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 19360912 - 19360856
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| || |||||||||| ||||| || ||||||||||||||||||    
T  19360912 atttctccaccttgacttataatttggtggtgatgtcagtttaaccatcaaccacca 19360856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 47102333 - 47102278
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| |||||||| |||||||||| || ||||||||||||||||||    
T  47102333 atttctccaccttgacttctaatt-ggtgatgatgtcaatttaaccatcaaccacca 47102278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 323 - 370
Target Start/End: Original strand, 27337758 - 27337805
Alignment:
Q  323 tctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctt 370  Q
    |||||||| |||| |||||||||||||||||| |||||||||||||||    
T  27337758 tctcccgcttccttgaagatcaccttgcatccaatcacccttggcctt 27337805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 323 - 370
Target Start/End: Complemental strand, 28842008 - 28841961
Alignment:
Q  323 tctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctt 370  Q
    |||||||| |||| |||||||||||||||||| |||||||||||||||    
T  28842008 tctcccgcttccttgaagatcaccttgcatccaatcacccttggcctt 28841961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 323 - 370
Target Start/End: Original strand, 31736440 - 31736487
Alignment:
Q  323 tctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctt 370  Q
    |||||||| |||| |||||||||||||||||| |||||||||||||||    
T  31736440 tctcccgcttccttgaagatcaccttgcatcctatcacccttggcctt 31736487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 51765601 - 51765535
Alignment:
Q  112 aaggagagggaagatgaaaacaataaacacaagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||||||||| |||||||| | |||| | |||||| ||||||||||||||||||||||| ||||    
T  51765601 aaggagagggaagaggaaaacaa-agacaccaaagattgttcacccagttcggtccaaacttgtccta 51765535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 367
Target Start/End: Complemental strand, 47179042 - 47178969
Alignment:
Q  293 tttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggc 367  Q
    |||||||| | |||||||||| || |||| ||||| || |||| |||||||||||||||||| ||||||||||||    
T  47179042 tttcaccataacatcttcaac-acagaacatctcctgcttccttgaagatcaccttgcatccaatcacccttggc 47178969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 294 - 367
Target Start/End: Complemental strand, 16227846 - 16227774
Alignment:
Q  294 ttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggc 367  Q
    ||||||| | |||||||||| || | || |||||||| |||| |||||||||||||||||| ||||||||||||    
T  16227846 ttcaccataacatcttcaac-acaggacatctcccgcttccttgaagatcaccttgcatccaatcacccttggc 16227774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 476 - 606
Target Start/End: Original strand, 31736577 - 31736710
Alignment:
Q  476 ctccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtac-ttccactatg-cttccgcct 573  Q
    |||||||||||||||||| |||| ||   ||||||||||||| | ||||| | |||||||||||||  |||||| |||| | |||||||| ||||  |||    
T  31736577 ctccatagccgtaccattaccggtgtgttcaactccacctcacgctgagcgtactctacctcaactagcaaatgcgtacatcccactatgtcttcaacct 31736676  T
Q  574 tgccactccacctcaa-aggttgatcacgagtat 606  Q
    ||  |||||||||||| |||| ||||| ||||||    
T  31736677 tgaaactccacctcaacaggtagatcatgagtat 31736710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 318 - 367
Target Start/End: Complemental strand, 51751693 - 51751644
Alignment:
Q  318 gaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggc 367  Q
    |||| |||||||| |||| |||||||||||||||||| ||||||||||||    
T  51751693 gaacatctcccgcttccttgaagatcaccttgcatccaatcacccttggc 51751644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 370
Target Start/End: Complemental strand, 20301782 - 20301735
Alignment:
Q  323 tctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctt 370  Q
    |||||||| ||||  ||||||||||||||||| |||||||||||||||    
T  20301782 tctcccgcttccttaaagatcaccttgcatccaatcacccttggcctt 20301735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 179
Target Start/End: Complemental strand, 3189502 - 3189468
Alignment:
Q  145 agattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||| ||||||||||||||||||||||||||||    
T  3189502 agattgttcacccagttcggtccaaacttgaccta 3189468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 179
Target Start/End: Complemental strand, 3198319 - 3198285
Alignment:
Q  145 agattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||| ||||||||||||||||||||||||||||    
T  3198319 agattgttcacccagttcggtccaaacttgaccta 3198285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 179
Target Start/End: Complemental strand, 3207158 - 3207124
Alignment:
Q  145 agattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||| ||||||||||||||||||||||||||||    
T  3207158 agattgttcacccagttcggtccaaacttgaccta 3207124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 179
Target Start/End: Original strand, 8550783 - 8550817
Alignment:
Q  145 agattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||| ||||||||||||||||||||||||||||    
T  8550783 agattgttcacccagttcggtccaaacttgaccta 8550817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 179
Target Start/End: Original strand, 13316348 - 13316382
Alignment:
Q  145 agattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||| ||||||||||||||||||||||||||||    
T  13316348 agattgttcacccagttcggtccaaacttgaccta 13316382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 179
Target Start/End: Complemental strand, 20762844 - 20762810
Alignment:
Q  145 agattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||||||| ||||||||||||||||||||||    
T  20762844 agattggtcacctagttcggtccaaacttgaccta 20762810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 294 - 372
Target Start/End: Original strand, 25249534 - 25249611
Alignment:
Q  294 ttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctttt 372  Q
    ||||||| | |||||||||| || | || |||||||| || | |||||||| ||||||||| |||||||||||||||||    
T  25249534 ttcaccataacatcttcaac-acaggacatctcccgcttctttgaagatcatcttgcatccaatcacccttggcctttt 25249611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 180 - 214
Target Start/End: Complemental strand, 44023377 - 44023343
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatg 214  Q
    ||||||||||||||||||||||||||||| |||||    
T  44023377 atttctccaccttgaattctaatttggtggtgatg 44023343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 294 - 372
Target Start/End: Original strand, 50077676 - 50077753
Alignment:
Q  294 ttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctttt 372  Q
    ||||||| | |||||||||| |||| || |||||||| |||| ||||  |||||||||||| |||||||||| ||||||    
T  50077676 ttcaccataacatcttcaac-acgggacatctcccgcttccttgaaggccaccttgcatccaatcacccttgacctttt 50077753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 590
Target Start/End: Complemental strand, 6996798 - 6996681
Alignment:
Q  475 cctccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtac-ttccactatg-cttccgcc 572  Q
    ||||||||||||||||||| |||  ||   ||||||||||||| | ||||| | |||||||||||||  |||||| |||| | |||||||| ||||  ||    
T  6996798 cctccatagccgtaccattaccgatgtgttcaactccacctcacgctgagcgtactctacctcaactagcaaatgcgtacatcccactatgtcttcaacc 6996699  T
Q  573 ttgccactccacctcaaa 590  Q
    |||  |||||||||||||    
T  6996698 ttgaaactccacctcaaa 6996681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1908 (Bit Score: 160; Significance: 6e-85; HSPs: 1)
Name: scaffold1908
Description:

Target: scaffold1908; HSP #1
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 207 - 606
Target Start/End: Complemental strand, 1111 - 717
Alignment:
Q  207 tgatgatgccactttaaccatcaaccaccaatc-----ttccttttcccttgcatccaactctacaccaagttgctccacaagtcttcatttttcaccaa 301  Q
    |||||||||||||||||||||||||||||||||     || ||||||| |||||||||  |||||||||||| ||||||||||| | |        ||||    
T  1111 tgatgatgccactttaaccatcaaccaccaatcccatttttcttttcc-ttgcatcca--tctacaccaagtagctccacaagtgtacc-------ccaa 1022  T
Q  302 accatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggccttttaggcaatcacacaagccactccatacatt 401  Q
    | |  |||||||||||||||||||||||  |||| |||||||||||||  | | || |||||||| |||||||| ||||||||||||||| |||||||||    
T  1021 atccacttcaaccacggaacgtctcccgtttccttgaagatcaccttgttttcaattacccttggtcttttaggtaatcacacaagccacaccatacatt 922  T
Q  402 cttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaagcctccatagccgtaccattcccggagt 501  Q
    ||||||||||||||   || ||| |||||||||||||| ||||||||||  |||||||||||||| |||||  |||||||||  |||||| || ||| ||    
T  921 cttcaaaccccggagcgccttccgtcctcatgaagaattcacatgctcaaaactagagcataaacacccaagacctccatagttgtaccagtctcggtgt 822  T
Q  502 caccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgcttccgccttgccactccacctcaaaggttgatcacg 601  Q
    || ||||||||||| ||||||||||||||||||||||||||||| ||| ||||   |||||||||| | |||||||||||||||||||| ||||||||||    
T  821 caacaactccaccttaagttgagctttctctacctcaacttccatatgcgtacacacactatgctttcaccttgccactccacctcaaatgttgatcacg 722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 148; Significance: 8e-78; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 180 - 606
Target Start/End: Original strand, 14634403 - 14634812
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccaccaatcttccttttcccttgcatccaactctacaccaagttgctcc 279  Q
    ||||||||||||||| |||||||| || ||||||| |||||||||||||| |||||||||        |||||||||||||||  ||||||||| |||||    
T  14634403 atttctccaccttgacttctaatt-ggcgatgatgtcactttaaccatcagccaccaatcc-------cccttgcatccaact--acaccaagtagctcc 14634492  T
Q  280 acaagtcttcatttttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttgg-ccttttaggcaa 378  Q
    |||||||| ||       ||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||| | ||||||| ||    
T  14634493 acaagtctgca-------ccaaaccctcttcaaccacggaacgtctcccgcttccttgaagatcaccttgcatccaatcacccttggtctttttaggtaa 14634585  T
Q  379 tcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaag-cct 477  Q
    ||||| |||| || ||||| ||||||||||||| ||||| || ||| ||||| |||||||| | ||||||||| |||||||||| ||| ||||| | |||    
T  14634586 tcacataagcaacgccatatattcttcaaaccctggaatgccttccgtcctcttgaagaattctcatgctcacaactagagcat-aacacccaaggccct 14634684  T
Q  478 ccatagccgtaccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtacttccactatgc-ttccgccttgc 576  Q
    |||||| ||||||||| |||| ||||| ||||||||||||||||||| |||||||||| |||||||||| || ||||   |||||||| ||   |||||     
T  14634685 ccatagtcgtaccatttccggtgtcactaactccacctcaagttgagatttctctaccccaacttccaattgcgtac--acactatgcttttaaccttgt 14634782  T
Q  577 cactccacctcaaaggttgatcacgagtat 606  Q
     ||||||||| |||||||||||||||||||    
T  14634783 aactccaccttaaaggttgatcacgagtat 14634812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 12647238 - 12647416
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaac-aaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaaccaa 97  Q
    |||||||||||||| ||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||  ||||||||| |||    
T  12647238 gagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagcaa-caa 12647336  T
Q  98 acacaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
     ||||||||   |||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  12647337 tcacaagat---acaaggagagggaagaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgaccta 12647416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 13655881 - 13656062
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaaaca--aagcaaccaa 97  Q
    |||||||||||||| |||| ||  ||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||  ||||||| ||    
T  13655881 gagtggtaaccaccgaacagagtatattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagcaac-aa 13655979  T
Q  98 acacaagatagaacaaggagagggaagatgaaaacaataaacac--aagagattggtcacccagttcggtccaaacttgaccta 179  Q
     ||||||||| ||||||||||||||||| |||||||| ||||||  ||||||||||||||||||||||||||||||||||||||    
T  13655980 tcacaagata-aacaaggagagggaagaagaaaacaacaaacaccaaagagattggtcacccagttcggtccaaacttgaccta 13656062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 359 - 606
Target Start/End: Original strand, 28569036 - 28569286
Alignment:
Q  359 acccttggccttttaggcaatcacacaagccactccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactaga 458  Q
    ||||||||| |||| |  |||| |||||| ||  ||||||||||||||||||||||||| || ||||||||| ||||||||   | ||||||| ||||||    
T  28569036 acccttggctttttcgataatcccacaagtcatgccatacattcttcaaaccccggaatgccttccatcctcttgaagaattaccttgctcacaactaga 28569135  T
Q  459 gcataaactcccaaagcctccatagccgtacca---ttcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtact 555  Q
    | |||  | ||| | | |||||||| |||||||   |||| || |||| ||||||||||| ||| ||||||||||||||||||||||||||||| ||||     
T  28569136 gaatag-caccctaggtctccatagtcgtaccaatattccaggtgtcatcaactccaccttaagctgagctttctctacctcaacttccaaatgcgtaca 28569234  T
Q  556 tccactat-gcttccgccttgccactccacctcaaaggttgatcacgagtat 606  Q
     ||||||| |||| | |||||| | |||||||||||||||||||||||||||    
T  28569235 cccactatggctttcaccttgcaaatccacctcaaaggttgatcacgagtat 28569286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 6267003 - 6266829
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaaacaaagcaaccaaac 99  Q
    ||||||||||||||||||||||  | |   | |||||| || ||||||| || |||||||||| ||||||||||| |||||  ||||| |  |  ||| |    
T  6267003 gagtggtaaccaccaaacaaagtgtgt---gtaagcaaaaatcaacaaaacaacacctagatctaatctaggaaagaagtgaaaaacacaatacacaagc 6266907  T
Q  100 acaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||| |||  |||||||||||| |||||||| | |||| ||||||||| ||||||||||||||||||||||||||||    
T  6266906 acaagata-aac--ggagagggaagaagaaaacaaaagacaccaagagattgttcacccagttcggtccaaacttgaccta 6266829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 19345010 - 19345064
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccac 234  Q
    ||||||||||||||| ||||||||||||| ||||| || ||||||||||||||||    
T  19345010 atttctccaccttgacttctaatttggtggtgatgtcaatttaaccatcaaccac 19345064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 554
Target Start/End: Original strand, 21519240 - 21519502
Alignment:
Q  294 ttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctttt----aggcaatcacacaagcc 389  Q
    ||||||| | |||||||||| || | || |||||||| |||| |||| || |||||||||| |||||||||||||||||    ||  |||| | ||||||    
T  21519240 ttcaccataacatcttcaac-acaggacatctcccgcttccttgaaggtctccttgcatccaatcacccttggcctttttttaagataatcccgcaagcc 21519338  T
Q  390 actccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaag-cctccatagccgta 488  Q
       | ||| ||||||||| | ||||||| || ||| || ||||||||||  | | ||||||||| |||||||| | | ||||| | ||||||||| ||||    
T  21519339 gtgctatatattcttcaacctccggaatgccttccgtcttcatgaagaaatcccttgctcacca-tagagcat-agcacccaaggtcctccatagtcgta 21519436  T
Q  489 ccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtac 554  Q
    ||||| |||| ||   ||||||||||||| | ||||| | |||||||||||||  |||||| ||||    
T  21519437 ccattaccggtgtgttcaactccacctcacgctgagcgtactctacctcaactagcaaatgcgtac 21519502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 32289770 - 32289702
Alignment:
Q  112 aaggagagggaagatgaaaacaataa-acacaagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||||||||| ||||||||  | ||  ||||||||| ||||||||||||||||||||||||||||    
T  32289770 aaggagagggaagaggaaaacaaggacaccaaagagattgttcacccagttcggtccaaacttgaccta 32289702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 4484294 - 4484360
Alignment:
Q  112 aaggagagggaagatgaaaacaataaacacaagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||||||||| |||||||| | |||| | |||||| ||||||||||| ||||||||||||||||    
T  4484294 aaggagagggaagaagaaaacaa-agacaccaaagattgttcacccagttctgtccaaacttgaccta 4484360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 507 - 554
Target Start/End: Complemental strand, 16604699 - 16604652
Alignment:
Q  507 actccacctcaagttgagctttctctacctcaacttccaaatgagtac 554  Q
    ||||||||| ||||||||||||||| ||||||||||||||||| ||||    
T  16604699 actccacctgaagttgagctttctccacctcaacttccaaatgtgtac 16604652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 30833550 - 30833484
Alignment:
Q  112 aaggagagggaagatgaaaacaataaacacaagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||||||||| |||||||| | |||| | |||||| ||||||||||| ||||||||||||||||    
T  30833550 aaggagagggaagaggaaaacaa-agacaccaaagattgttcacccagttcagtccaaacttgaccta 30833484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 323 - 589
Target Start/End: Original strand, 6263065 - 6263335
Alignment:
Q  323 tctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctttta----ggcaatcacacaagccactccatacattcttcaaaccccggaata 418  Q
    |||||||| |||| |||||||||||||||||| ||||| |||||||||||     || |||| | ||||||   | ||||||||||||| | || ||||     
T  6263065 tctcccgcttccttgaagatcaccttgcatccaatcacacttggcctttttttagggtaatcccgcaagccgtgctatacattcttcaacctccagaatg 6263164  T
Q  419 ccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaag-cctccatagccgtaccattcccggagtcaccaactccacctca 517  Q
     | ||  || ||||||||||  | | ||||||||  |||||||||  | ||||| | ||||||||| ||||||||| |||| ||   |||||||||||||    
T  6263165 tcttctgtcttcatgaagaaatcccttgctcacc--tagagcatag-cacccaaggtcctccatagtcgtaccattaccggtgtgttcaactccacctca 6263261  T
Q  518 agttgagctttctctacctcaacttccaaatgagtac-ttccactatg-cttccgccttgccactccacctcaa 589  Q
    || ||||| | |||||||||||||  |||||| |||| | |||||||| ||||  |||||  ||||||||||||    
T  6263262 agctgagcgtactctacctcaactagcaaatgcgtacatcccactatgtcttcaaccttgaaactccacctcaa 6263335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 179
Target Start/End: Original strand, 4503129 - 4503163
Alignment:
Q  145 agattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||| ||||||||||||||||||||||||||||    
T  4503129 agattgttcacccagttcggtccaaacttgaccta 4503163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 179
Target Start/End: Original strand, 36205661 - 36205695
Alignment:
Q  145 agattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||| ||||||||||||||||||||||||||||    
T  36205661 agattgttcacccagttcggtccaaacttgaccta 36205695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 179
Target Start/End: Original strand, 36988072 - 36988106
Alignment:
Q  145 agattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||| ||||||||||||||||||||||||||||    
T  36988072 agattgttcacccagttcggtccaaacttgaccta 36988106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 39483502 - 39483555
Alignment:
Q  182 ttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||| |||||||| |||| ||||| || ||||||||||||||||||    
T  39483502 ttctccaccttgacttctaatt-ggtggtgatgtcaatttaaccatcaaccacca 39483555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 179
Target Start/End: Complemental strand, 45099926 - 45099892
Alignment:
Q  145 agattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||| ||||||||||||||||||||||||||||    
T  45099926 agattgttcacccagttcggtccaaacttgaccta 45099892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 548
Target Start/End: Complemental strand, 27894234 - 27894193
Alignment:
Q  507 actccacctcaagttgagctttctctacctcaacttccaaat 548  Q
    |||||||||||||||||||||||| || ||||| ||||||||    
T  27894234 actccacctcaagttgagctttctatatctcaaattccaaat 27894193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 367
Target Start/End: Original strand, 36559768 - 36559817
Alignment:
Q  318 gaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggc 367  Q
    |||| ||| |||| |||| |||||||||||||||||| ||||||||||||    
T  36559768 gaacatcttccgcttccttgaagatcaccttgcatccaatcacccttggc 36559817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 463
Target Start/End: Original strand, 42018503 - 42018572
Alignment:
Q  394 catacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcata 463  Q
    ||||||||||||||  || ||||| || ||||||||| |||||||| | | ||||||| |||||||||||    
T  42018503 catacattcttcaactcctggaatgccttccatcctcttgaagaattcccctgctcacaactagagcata 42018572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 306 - 409
Target Start/End: Original strand, 13829047 - 13829151
Alignment:
Q  306 tcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctttta-ggcaatcacacaagccactccatacattctt 404  Q
    |||||||||||||||| ||||| || |||| |||||||  |||| |||| |||||||||   |||||| || |||  |||||||||  | ||||||||||    
T  13829047 tcttcaaccacggaacatctcctgcttccttgaagatcttcttgtatccaatcacccttactcttttagggtaatgccacaagccatgctatacattctt 13829146  T
Q  405 caaac 409  Q
    |||||    
T  13829147 caaac 13829151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 116; Significance: 1e-58; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 6591 - 6411
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaa-acaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaaccaa 97  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||| |||    
T  6591 gagtggtaaccaccaaacaaagtttattgtgcaagcaagaaacaacaatacaccacctagatccaatctaggaaacaagtgtgaaacacaaagcaa-caa 6493  T
Q  98 acacaagatagaacaaggagagggaagatgaaaacaataa-acacaagagattggtcacccagttcggtccaaacttgaccta 179  Q
     ||||||||| ||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||| |||||    
T  6492 tcacaagataaaacaaggagagggaagaagaaaacaataacaca-aagagattggtcacccagttcggtccaaacttaaccta 6411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1808 (Bit Score: 110; Significance: 4e-55; HSPs: 1)
Name: scaffold1808
Description:

Target: scaffold1808; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 181 - 3
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaaaca--aagcaaccaa 97  Q
    |||||||||||||| ||||||| |||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||  ||||||| ||    
T  181 gagtggtaaccacctaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagcaac-aa 83  T
Q  98 acacaagatagaacaaggagagggaagatgaaaacaataaacacaa-gagattggtcacccagttcggtccaaacttgaccta 179  Q
     |||||||||   ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  82 tcacaagata---caaggagagggaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgaccta 3  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 110; Significance: 4e-55; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 3578 - 3756
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtgaaaca--aagcaaccaa 97  Q
    |||||||||||||| ||||||| |||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||  ||||||| ||    
T  3578 gagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagcaac-aa 3676  T
Q  98 acacaagatagaacaaggagagggaagatgaaaacaataaacacaa-gagattggtcacccagttcggtccaaacttgaccta 179  Q
     |||||||||   ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3677 tcacaagata---caaggagagggaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgaccta 3756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 106; Significance: 1e-52; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 2456 - 2634
Alignment:
Q  1 gagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaac-aaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaaccaa 97  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||  ||||||||| |||    
T  2456 gagtggtaaccaccaaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagcaa-caa 2554  T
Q  98 acacaagatagaacaaggagagggaagatgaaaacaataaacac-aagagattggtcacccagttcggtccaaacttgaccta 179  Q
     ||||||||   |||||||||||||||| ||||||||||||||| || |||||| ||||||||||||||||||||||||||||    
T  2555 tcacaagat---acaaggagagggaagaagaaaacaataaacacaaaaagattgttcacccagttcggtccaaacttgaccta 2634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 294 - 606
Target Start/End: Complemental strand, 51415 - 51098
Alignment:
Q  294 ttcaccaaaccatcttcaaccacggaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctttt----aggcaatcacacaagcc 389  Q
    ||||||| | |||||||||| || | || |||||||| |||| |||||||||||||||||| |||||||||||||||||     || |||| | ||||||    
T  51415 ttcaccataacatcttcaac-acaggacatctcccgcttccttgaagatcaccttgcatccaatcacccttggcctttttttagggtaatcccgcaagcc 51317  T
Q  390 actccatacattcttcaaaccccggaataccatccatcctcatgaagaatccacatgctcaccactagagcataaactcccaaag-cctccatagccgta 488  Q
       | ||||||||||||| | ||||||  || ||| || || |||||||  | | ||||||||| |||||||| | | ||||| | ||||||||||||||    
T  51316 gtgctatacattcttcaacctccggaacgccttccgtcttcgtgaagaaatcccttgctcacca-tagagcat-agcacccaacgtcctccatagccgta 51219  T
Q  489 ccattcccggagtcaccaactccacctcaagttgagctttctctacctcaacttccaaatgagtac-ttccactatg-cttccgccttgccactccacct 586  Q
    ||||| |||| ||   ||||||||||||| | ||||| | |||||||||||||  |||||| |||| | |||||||| ||||  |||||  |||||||||    
T  51218 ccattaccggtgtgttcaactccacctcacgctgagcgtactctacctcaactagcaaatgtgtacatcccactatgtcttcaaccttgaaactccacct 51119  T
Q  587 caa-aggttgatcacgagtat 606  Q
    ||| |||| ||||| ||||||    
T  51118 caacaggtagatcatgagtat 51098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 1739 - 1683
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| ||||||||||||| ||||| || ||||||||||||||||||    
T  1739 atttctccaccttgacttctaatttggtggtgatgtcaatttaaccatcaaccacca 1683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 522 - 601
Target Start/End: Original strand, 23084 - 23164
Alignment:
Q  522 gagctttctctacctcaacttccaaatgagtacttccactatg-cttccgccttgccactccacctcaaaggttgatcacg 601  Q
    |||||||||| ||||||||||||||||| |||| |||| |||| ||| | |||||| ||||||||| ||||||||||||||    
T  23084 gagctttctccacctcaacttccaaatgcgtacatccattatgtctttcaccttgcaactccaccttaaaggttgatcacg 23164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 13784 - 13728
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| ||||||||||||| ||||| || ||||||||||||||||||    
T  13784 atttctccaccttgacttctaatttggtggtgatgtcaatttaaccatcaaccacca 13728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 18663 - 18607
Alignment:
Q  180 atttctccaccttgaattctaatttggtgatgatgccactttaaccatcaaccacca 236  Q
    ||||||||||||||| ||||||||||||| ||||| || ||||||||||||||||||    
T  18663 atttctccaccttgacttctaatttggtggtgatgtcaatttaaccatcaaccacca 18607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Complemental strand, 11733 - 11695
Alignment:
Q  141 caagagattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  11733 caagagattgttcacccagttcggtccaaacttgaccta 11695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 323 - 463
Target Start/End: Complemental strand, 4151 - 4010
Alignment:
Q  323 tctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctttta-ggcaatcacacaagccactccatacattcttcaaaccccggaatacca 421  Q
    |||||||| |||| ||||||| |||| ||||| |||||||||||| ||||| || |||| | |||| |   | |||||||||||||||   ||||| ||     
T  4151 tctcccgcttccttgaagatctccttacatccaatcacccttggctttttagggtaatcccgcaagtcgtgctatacattcttcaaactttggaatgcct 4052  T
Q  422 tccatcctcatgaagaatccacatgctcaccactagagcata 463  Q
    ||| || ||||||||||  | | |||||||||||||||||||    
T  4051 tccgtcttcatgaagaaatcccttgctcaccactagagcata 4010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 370
Target Start/End: Original strand, 70156 - 70203
Alignment:
Q  323 tctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctt 370  Q
    |||||||| |||| |||| ||||||||||||| |||||||||||||||    
T  70156 tctcccgcttccttgaaggtcaccttgcatccaatcacccttggcctt 70203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 179
Target Start/End: Complemental strand, 1087 - 1053
Alignment:
Q  145 agattggtcacccagttcggtccaaacttgaccta 179  Q
    |||||| ||||||||||||||||||||||||||||    
T  1087 agattgttcacccagttcggtccaaacttgaccta 1053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 367
Target Start/End: Complemental strand, 23779 - 23730
Alignment:
Q  318 gaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggc 367  Q
    |||| |||||||| |||| |||||||||||||||||| ||||| ||||||    
T  23779 gaacatctcccgcttccttgaagatcaccttgcatccaatcactcttggc 23730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 29; Significance: 0.0000009; HSPs: 2)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 318 - 370
Target Start/End: Original strand, 411 - 463
Alignment:
Q  318 gaacgtctcccgcctcctcgaagatcaccttgcatccgatcacccttggcctt 370  Q
    |||| |||||||| |||| ||||| |||||||||||| |||||| ||||||||    
T  411 gaacatctcccgcttccttgaagaccaccttgcatccaatcaccattggcctt 463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 606
Target Start/End: Original strand, 582 - 686
Alignment:
Q  505 caactccacctcaagttgagctttctctacctcaacttccaaatgagtac-ttccactatg-cttccgccttgccactccacctcaa-aggttgatcacg 601  Q
    ||||||||||||| ||||||| | |||||||||||||  |||||| |||| | |||||||| ||||  |||||  |||||||||||| |||| ||||| |    
T  582 caactccacctcacgttgagcgtactctacctcaactagcaaatgcgtacatcccactatgtcttcaaccttgaaactccacctcaacaggtagatcatg 681  T
Q  602 agtat 606  Q
    |||||    
T  682 agtat 686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 147 - 179
Target Start/End: Complemental strand, 434703 - 434671
Alignment:
Q  147 attggtcacccagttcggtccaaacttgaccta 179  Q
    |||| ||||||||||||||||||||||||||||    
T  434703 attgttcacccagttcggtccaaacttgaccta 434671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University