View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17544_high_5 (Length: 395)

Name: NF17544_high_5
Description: NF17544
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17544_high_5
NF17544_high_5
[»] chr6 (48 HSPs)
chr6 (1-339)||(19704826-19705163)
chr6 (92-339)||(18317753-18317998)
chr6 (94-339)||(2629234-2629477)
chr6 (140-339)||(5275727-5275926)
chr6 (92-339)||(12195857-12196102)
chr6 (92-339)||(30034949-30035194)
chr6 (92-339)||(30966925-30967170)
chr6 (93-339)||(26932913-26933156)
chr6 (92-339)||(17011781-17012017)
chr6 (92-333)||(17852275-17852514)
chr6 (92-339)||(22858296-22858534)
chr6 (175-339)||(20526548-20526708)
chr6 (175-261)||(30445318-30445404)
chr6 (175-261)||(30443111-30443195)
chr6 (1-43)||(4816488-4816530)
chr6 (1-43)||(20915613-20915655)
chr6 (1-65)||(28241578-28241636)
chr6 (1-52)||(2629142-2629192)
chr6 (1-39)||(24338705-24338743)
chr6 (1-39)||(25477293-25477331)
chr6 (1-43)||(26065001-26065043)
chr6 (1-43)||(26084970-26085012)
chr6 (1-43)||(30967216-30967258)
chr6 (1-39)||(32447573-32447611)
chr6 (2-39)||(13057213-13057250)
chr6 (1-65)||(14459022-14459080)
chr6 (2-39)||(15541398-15541435)
chr6 (1-41)||(8995496-8995536)
chr6 (1-41)||(9019943-9019983)
chr6 (1-39)||(3390398-3390436)
chr6 (1-39)||(12195772-12195810)
chr6 (1-39)||(14507432-14507470)
chr6 (5-39)||(15532942-15532976)
chr6 (1-65)||(19227665-19227723)
chr6 (1-42)||(30034860-30034901)
chr6 (7-39)||(15719673-15719705)
chr6 (284-327)||(12158532-12158575)
chr6 (8-39)||(17852561-17852592)
chr6 (1-39)||(1072134-1072172)
chr6 (1-39)||(1230506-1230544)
chr6 (1-39)||(3630121-3630159)
chr6 (1-39)||(3632195-3632233)
chr6 (1-39)||(11983286-11983324)
chr6 (2-65)||(26932820-26932885)
chr6 (1-38)||(3233988-3234025)
chr6 (2-39)||(13039773-13039810)
chr6 (95-131)||(20526744-20526780)
chr6 (286-331)||(30443022-30443069)
[»] chr1 (85 HSPs)
chr1 (92-373)||(31735869-31736147)
chr1 (92-339)||(15295192-15295437)
chr1 (141-373)||(27337332-27337564)
chr1 (1-339)||(47905958-47906292)
chr1 (92-339)||(17324980-17325225)
chr1 (92-339)||(39931764-39932008)
chr1 (1-339)||(9463503-9463838)
chr1 (140-339)||(24325349-24325548)
chr1 (92-309)||(21948535-21948751)
chr1 (143-339)||(48664854-48665050)
chr1 (92-339)||(9459767-9460011)
chr1 (92-339)||(27339478-27339728)
chr1 (143-336)||(2949617-2949810)
chr1 (156-339)||(6115532-6115716)
chr1 (140-339)||(28998643-28998842)
chr1 (140-339)||(29004359-29004558)
chr1 (151-339)||(45693834-45694022)
chr1 (149-339)||(4131690-4131880)
chr1 (153-373)||(6997182-6997395)
chr1 (143-303)||(6996067-6996221)
chr1 (92-229)||(46432072-46432207)
chr1 (226-339)||(46432521-46432634)
chr1 (188-339)||(16561133-16561284)
chr1 (175-261)||(11693580-11693666)
chr1 (140-219)||(2510722-2510801)
chr1 (175-261)||(13785662-13785748)
chr1 (94-207)||(26520463-26520580)
chr1 (175-258)||(14352759-14352842)
chr1 (140-202)||(6115479-6115541)
chr1 (1-65)||(28842457-28842517)
chr1 (1-65)||(47177322-47177384)
chr1 (1-65)||(47179673-47179735)
chr1 (1-65)||(9459676-9459740)
chr1 (175-258)||(10115572-10115653)
chr1 (1-65)||(24325620-24325685)
chr1 (1-43)||(21948446-21948488)
chr1 (1-43)||(27337197-27337239)
chr1 (211-261)||(32260833-32260883)
chr1 (1-65)||(6822979-6823037)
chr1 (1-65)||(20302423-20302481)
chr1 (282-331)||(32260746-32260795)
chr1 (1-41)||(39932055-39932095)
chr1 (1-52)||(25127843-25127894)
chr1 (1-43)||(2510583-2510625)
chr1 (1-43)||(12302764-12302806)
chr1 (222-268)||(13112047-13112093)
chr1 (1-39)||(13215065-13215103)
chr1 (1-43)||(15295093-15295135)
chr1 (1-39)||(17318877-17318915)
chr1 (1-39)||(18307093-18307131)
chr1 (1-39)||(25248773-25248811)
chr1 (1-43)||(27339389-27339431)
chr1 (1-39)||(31423133-31423171)
chr1 (1-39)||(51750023-51750061)
chr1 (1-38)||(16428638-16428675)
chr1 (1-65)||(6823848-6823907)
chr1 (1-40)||(15823529-15823568)
chr1 (5-65)||(28840642-28840698)
chr1 (1-39)||(13761821-13761859)
chr1 (1-39)||(17186387-17186425)
chr1 (1-39)||(18839571-18839609)
chr1 (1-39)||(28207325-28207363)
chr1 (1-39)||(31425278-31425316)
chr1 (1-39)||(31735780-31735818)
chr1 (1-39)||(41646904-41646942)
chr1 (1-65)||(2617480-2617538)
chr1 (6-39)||(50079085-50079118)
chr1 (1-41)||(4131638-4131678)
chr1 (7-39)||(6115344-6115376)
chr1 (8-39)||(2949497-2949528)
chr1 (8-39)||(10400094-10400125)
chr1 (284-331)||(11693706-11693753)
chr1 (1-43)||(46431966-46432009)
chr1 (1-39)||(6995959-6995997)
chr1 (1-39)||(11457734-11457772)
chr1 (1-39)||(16231585-16231623)
chr1 (1-39)||(20291441-20291479)
chr1 (1-39)||(25251534-25251572)
chr1 (5-39)||(31489899-31489933)
chr1 (1-39)||(38925737-38925775)
chr1 (5-39)||(51752349-51752383)
chr1 (282-331)||(13785786-13785835)
chr1 (291-331)||(10115466-10115506)
chr1 (1-33)||(48665167-48665199)
chr1 (11-39)||(49495468-49495496)
[»] chr5 (65 HSPs)
chr5 (1-375)||(27912185-27912558)
chr5 (92-373)||(18468666-18468944)
chr5 (92-339)||(25803709-25803953)
chr5 (92-373)||(18509661-18509939)
chr5 (92-341)||(18511556-18511802)
chr5 (92-373)||(26098593-26098873)
chr5 (92-345)||(27910131-27910382)
chr5 (92-339)||(3373383-3373628)
chr5 (92-339)||(15551927-15552172)
chr5 (92-321)||(10586549-10586776)
chr5 (92-339)||(26097423-26097670)
chr5 (92-339)||(18596328-18596584)
chr5 (92-261)||(18466453-18466617)
chr5 (158-339)||(21288531-21288713)
chr5 (189-334)||(17415748-17415893)
chr5 (92-261)||(15143262-15143425)
chr5 (237-339)||(6661929-6662031)
chr5 (1-65)||(4410021-4410083)
chr5 (140-208)||(40221340-40221408)
chr5 (282-339)||(40221284-40221341)
chr5 (287-339)||(18466413-18466465)
chr5 (1-43)||(18468991-18469033)
chr5 (1-43)||(34477311-34477353)
chr5 (1-43)||(34479676-34479718)
chr5 (287-336)||(15143225-15143274)
chr5 (1-65)||(18466644-18466706)
chr5 (1-43)||(1189866-1189908)
chr5 (1-39)||(2174903-2174941)
chr5 (1-39)||(20507719-20507757)
chr5 (1-43)||(21684708-21684750)
chr5 (1-39)||(31542719-31542757)
chr5 (1-65)||(25921730-25921788)
chr5 (1-41)||(16092457-16092497)
chr5 (1-40)||(6747289-6747328)
chr5 (5-39)||(2818597-2818631)
chr5 (1-43)||(15552225-15552267)
chr5 (1-39)||(16776142-16776180)
chr5 (1-39)||(17072867-17072905)
chr5 (1-39)||(20043034-20043072)
chr5 (1-43)||(25804005-25804047)
chr5 (1-39)||(25904087-25904125)
chr5 (1-39)||(31179628-31179666)
chr5 (1-39)||(31472870-31472908)
chr5 (1-39)||(31545064-31545102)
chr5 (1-39)||(40221506-40221544)
chr5 (1-65)||(10529356-10529414)
chr5 (8-41)||(18511476-18511509)
chr5 (1-65)||(39854448-39854505)
chr5 (1-65)||(27910409-27910472)
chr5 (1-65)||(38882069-38882128)
chr5 (1-36)||(10474580-10474615)
chr5 (8-39)||(36402592-36402623)
chr5 (1-39)||(695873-695911)
chr5 (1-39)||(4236613-4236651)
chr5 (175-217)||(6661594-6661636)
chr5 (1-43)||(6745049-6745091)
chr5 (1-39)||(6756478-6756516)
chr5 (1-39)||(26098508-26098546)
chr5 (1-39)||(34530923-34530961)
chr5 (1-39)||(37706037-37706075)
chr5 (1-39)||(39398250-39398287)
chr5 (92-130)||(40221423-40221461)
chr5 (282-331)||(5779168-5779217)
chr5 (1-65)||(10586803-10586864)
chr5 (188-261)||(32520241-32520316)
[»] chr4 (86 HSPs)
chr4 (92-375)||(22132741-22133021)
chr4 (92-375)||(14787775-14788055)
chr4 (92-373)||(5100711-5100988)
chr4 (92-339)||(22134972-22135217)
chr4 (1-339)||(17662491-17662824)
chr4 (140-339)||(56030191-56030390)
chr4 (140-339)||(24347961-24348159)
chr4 (140-339)||(44600227-44600426)
chr4 (94-325)||(30136331-30136560)
chr4 (191-339)||(47211158-47211306)
chr4 (100-339)||(38890478-38890699)
chr4 (175-339)||(10112628-10112787)
chr4 (92-234)||(19322547-19322689)
chr4 (175-339)||(9022062-9022225)
chr4 (187-339)||(9863501-9863650)
chr4 (175-261)||(54929094-54929180)
chr4 (92-210)||(53405001-53405118)
chr4 (182-261)||(10979676-10979755)
chr4 (282-339)||(14789512-14789569)
chr4 (1-64)||(8631676-8631737)
chr4 (1-65)||(38409217-38409281)
chr4 (1-65)||(5637722-5637784)
chr4 (1-65)||(47210997-47211061)
chr4 (1-65)||(9148269-9148329)
chr4 (1-48)||(11006494-11006541)
chr4 (1-48)||(11008823-11008870)
chr4 (240-339)||(19322410-19322510)
chr4 (1-64)||(7941338-7941397)
chr4 (1-43)||(18709420-18709462)
chr4 (1-43)||(24348252-24348294)
chr4 (175-331)||(38209098-38209259)
chr4 (1-65)||(5198438-5198496)
chr4 (1-65)||(24888814-24888872)
chr4 (199-258)||(29609838-29609897)
chr4 (1-39)||(11434993-11435031)
chr4 (1-39)||(22044647-22044685)
chr4 (1-39)||(22046942-22046980)
chr4 (1-39)||(24446836-24446874)
chr4 (1-39)||(31849856-31849894)
chr4 (1-43)||(37089628-37089670)
chr4 (1-39)||(37313323-37313361)
chr4 (1-39)||(40637112-40637150)
chr4 (1-39)||(47274765-47274803)
chr4 (1-39)||(51015284-51015322)
chr4 (1-38)||(2891356-2891393)
chr4 (1-65)||(6764857-6764915)
chr4 (1-41)||(14787688-14787728)
chr4 (1-41)||(16453345-16453385)
chr4 (210-261)||(5516701-5516752)
chr4 (1-65)||(36919842-36919902)
chr4 (1-39)||(3937466-3937504)
chr4 (1-39)||(9174403-9174441)
chr4 (1-39)||(9176731-9176769)
chr4 (1-39)||(18847191-18847229)
chr4 (1-43)||(22134872-22134913)
chr4 (1-43)||(22780630-22780672)
chr4 (1-43)||(22782995-22783037)
chr4 (1-39)||(22802991-22803029)
chr4 (5-39)||(33415748-33415782)
chr4 (1-39)||(36378330-36378368)
chr4 (1-39)||(38928435-38928473)
chr4 (1-39)||(40091672-40091710)
chr4 (1-39)||(44600095-44600133)
chr4 (92-166)||(47211088-47211160)
chr4 (1-39)||(48486357-48486395)
chr4 (1-65)||(53405145-53405206)
chr4 (222-261)||(14647175-14647214)
chr4 (8-39)||(19095920-19095951)
chr4 (8-39)||(22801126-22801157)
chr4 (292-327)||(29609948-29609983)
chr4 (1-65)||(36921751-36921810)
chr4 (1-39)||(619704-619742)
chr4 (1-39)||(12396102-12396140)
chr4 (1-39)||(12401064-12401102)
chr4 (1-39)||(16932046-16932084)
chr4 (1-39)||(16934400-16934438)
chr4 (92-130)||(18709513-18709551)
chr4 (1-39)||(24879027-24879065)
chr4 (1-39)||(38270243-38270281)
chr4 (1-39)||(47868439-47868477)
chr4 (1-39)||(52942703-52942740)
chr4 (282-331)||(54929220-54929267)
chr4 (317-373)||(16455017-16455074)
chr4 (8-41)||(16455323-16455356)
chr4 (1-30)||(22132647-22132676)
chr4 (285-325)||(5516793-5516833)
[»] chr7 (88 HSPs)
chr7 (92-373)||(20299123-20299401)
chr7 (92-373)||(7092521-7092800)
chr7 (92-373)||(28487217-28487496)
chr7 (92-373)||(31156253-31156532)
chr7 (92-373)||(38395954-38396233)
chr7 (1-339)||(7094679-7095013)
chr7 (92-339)||(1849667-1849912)
chr7 (92-373)||(7349621-7349899)
chr7 (92-373)||(7470368-7470653)
chr7 (92-339)||(1606173-1606417)
chr7 (92-339)||(3035417-3035664)
chr7 (92-339)||(11756927-11757171)
chr7 (92-336)||(20625739-20625981)
chr7 (92-336)||(20629630-20629872)
chr7 (92-336)||(20642049-20642291)
chr7 (92-339)||(7472326-7472572)
chr7 (92-339)||(28485263-28485509)
chr7 (141-339)||(47865330-47865528)
chr7 (92-339)||(7352000-7352244)
chr7 (92-339)||(18345239-18345484)
chr7 (92-339)||(37412470-37412714)
chr7 (92-339)||(21470637-21470881)
chr7 (140-333)||(24258166-24258358)
chr7 (92-339)||(21989855-21990098)
chr7 (92-339)||(38393685-38393929)
chr7 (92-339)||(42331341-42331591)
chr7 (92-269)||(13099818-13099993)
chr7 (140-261)||(43253914-43254035)
chr7 (92-339)||(3676999-3677227)
chr7 (193-339)||(443328-443474)
chr7 (95-237)||(20297163-20297302)
chr7 (175-338)||(40281824-40281989)
chr7 (1-65)||(7351909-7351973)
chr7 (175-261)||(12310442-12310528)
chr7 (1-65)||(7470279-7470341)
chr7 (1-65)||(7349530-7349594)
chr7 (1-65)||(3878549-3878609)
chr7 (1-43)||(1849971-1850013)
chr7 (8-65)||(7092439-7092494)
chr7 (1-43)||(48457643-48457685)
chr7 (1-65)||(44538-44596)
chr7 (1-65)||(3035691-3035753)
chr7 (1-65)||(7472237-7472299)
chr7 (282-331)||(20297108-20297157)
chr7 (1-65)||(20626008-20626070)
chr7 (1-65)||(20629899-20629961)
chr7 (1-65)||(20642318-20642380)
chr7 (1-65)||(38393956-38394018)
chr7 (1-39)||(1049552-1049590)
chr7 (1-39)||(11355252-11355290)
chr7 (1-39)||(20137366-20137404)
chr7 (1-39)||(21678060-21678098)
chr7 (1-39)||(21680021-21680059)
chr7 (1-39)||(24258457-24258495)
chr7 (1-39)||(26804563-26804601)
chr7 (1-39)||(27306486-27306524)
chr7 (5-43)||(28487543-28487581)
chr7 (1-39)||(31156168-31156206)
chr7 (1-65)||(20297332-20297394)
chr7 (1-65)||(40946298-40946360)
chr7 (283-331)||(10690684-10690732)
chr7 (214-261)||(12484976-12485023)
chr7 (214-261)||(12506407-12506454)
chr7 (1-43)||(1047181-1047223)
chr7 (1-43)||(9680809-9680851)
chr7 (1-39)||(18345535-18345573)
chr7 (1-39)||(18567607-18567645)
chr7 (1-39)||(22828890-22828928)
chr7 (1-39)||(31435304-31435342)
chr7 (1-43)||(38396306-38396348)
chr7 (287-333)||(43254023-43254069)
chr7 (1-39)||(44724573-44724611)
chr7 (1-65)||(35603-35661)
chr7 (166-247)||(10690773-10690854)
chr7 (1-65)||(28485536-28485598)
chr7 (7-39)||(24465543-24465575)
chr7 (8-39)||(4296199-4296230)
chr7 (8-39)||(7188537-7188568)
chr7 (214-261)||(12657600-12657647)
chr7 (8-39)||(42331263-42331294)
chr7 (92-130)||(443504-443542)
chr7 (1-39)||(13099733-13099771)
chr7 (1-39)||(21592400-21592438)
chr7 (1-39)||(22251799-22251837)
chr7 (1-35)||(24748592-24748626)
chr7 (1-39)||(37412385-37412423)
chr7 (1-39)||(40836999-40837037)
chr7 (11-39)||(22392467-22392495)
[»] scaffold0511 (2 HSPs)
scaffold0511 (94-339)||(1737-1980)
scaffold0511 (1-65)||(2009-2073)
[»] chr3 (86 HSPs)
chr3 (92-373)||(457918-458197)
chr3 (92-375)||(42991919-42992199)
chr3 (92-375)||(53915836-53916116)
chr3 (1-339)||(746424-746759)
chr3 (140-339)||(4104282-4104481)
chr3 (92-339)||(25533109-25533351)
chr3 (91-339)||(51943044-51943289)
chr3 (92-339)||(10621882-10622125)
chr3 (92-339)||(455575-455820)
chr3 (92-339)||(1313084-1313327)
chr3 (92-339)||(27635968-27636210)
chr3 (144-339)||(41848806-41849001)
chr3 (92-339)||(42989954-42990199)
chr3 (92-336)||(53918004-53918245)
chr3 (175-258)||(11066346-11066429)
chr3 (282-339)||(6561615-6561672)
chr3 (186-258)||(54287487-54287559)
chr3 (191-256)||(53974011-53974077)
chr3 (1-50)||(42990257-42990306)
chr3 (2-65)||(10084645-10084706)
chr3 (1-65)||(6063701-6063761)
chr3 (1-55)||(38889990-38890042)
chr3 (1-43)||(455867-455909)
chr3 (1-43)||(458244-458286)
chr3 (1-43)||(4104150-4104192)
chr3 (191-261)||(11072731-11072801)
chr3 (1-43)||(30005801-30005843)
chr3 (1-65)||(4308536-4308594)
chr3 (1-65)||(11163094-11163152)
chr3 (1-65)||(11170348-11170406)
chr3 (1-65)||(27101436-27101498)
chr3 (1-65)||(9604862-9604925)
chr3 (2-65)||(10191565-10191626)
chr3 (92-131)||(6561689-6561728)
chr3 (1-65)||(25533378-25533444)
chr3 (3-64)||(1321386-1321441)
chr3 (1-39)||(1626938-1626976)
chr3 (1-39)||(3859492-3859530)
chr3 (1-39)||(5191617-5191655)
chr3 (1-39)||(5522870-5522908)
chr3 (1-39)||(6561774-6561812)
chr3 (1-39)||(28102257-28102295)
chr3 (1-39)||(28137550-28137588)
chr3 (1-39)||(35918204-35918242)
chr3 (1-43)||(38210330-38210372)
chr3 (1-39)||(43226050-43226088)
chr3 (1-39)||(45882903-45882941)
chr3 (1-39)||(47149150-47149188)
chr3 (1-42)||(42992247-42992288)
chr3 (1-65)||(51727261-51727319)
chr3 (282-331)||(53974148-53974197)
chr3 (1-41)||(18099425-18099465)
chr3 (7-43)||(29956646-29956682)
chr3 (1-41)||(50493961-50494001)
chr3 (1-43)||(10621785-10621827)
chr3 (285-331)||(11072644-11072690)
chr3 (1-39)||(15780824-15780862)
chr3 (1-39)||(24979671-24979709)
chr3 (1-39)||(26720512-26720550)
chr3 (1-39)||(28100296-28100334)
chr3 (1-39)||(32219059-32219097)
chr3 (1-39)||(32264294-32264332)
chr3 (1-39)||(35777385-35777423)
chr3 (1-39)||(43228255-43228293)
chr3 (1-39)||(43423718-43423756)
chr3 (1-39)||(47701850-47701888)
chr3 (1-39)||(51675010-51675048)
chr3 (6-43)||(6719357-6719394)
chr3 (1-38)||(10956282-10956319)
chr3 (1-38)||(10958578-10958615)
chr3 (2-39)||(22114561-22114598)
chr3 (1-65)||(6066051-6066110)
chr3 (1-41)||(18097155-18097195)
chr3 (214-261)||(5535882-5535929)
chr3 (8-39)||(27635889-27635920)
chr3 (8-43)||(41849112-41849147)
chr3 (5-39)||(3314648-3314682)
chr3 (1-39)||(5927019-5927057)
chr3 (1-39)||(6231413-6231451)
chr3 (1-39)||(28761683-28761721)
chr3 (92-130)||(41849021-41849059)
chr3 (1-39)||(43421670-43421708)
chr3 (1-39)||(51943335-51943373)
chr3 (7-40)||(3306762-3306795)
chr3 (1-38)||(53468710-53468747)
chr3 (10-38)||(53915760-53915788)
[»] chr2 (50 HSPs)
chr2 (140-373)||(35215983-35216216)
chr2 (140-339)||(42452451-42452650)
chr2 (140-339)||(23452628-23452827)
chr2 (140-339)||(35218364-35218563)
chr2 (140-339)||(42923893-42924092)
chr2 (92-339)||(27583667-27583905)
chr2 (175-331)||(28568584-28568740)
chr2 (175-261)||(15693669-15693755)
chr2 (211-339)||(27136367-27136503)
chr2 (246-334)||(34575608-34575696)
chr2 (175-260)||(7502638-7502723)
chr2 (190-261)||(39286971-39287042)
chr2 (182-261)||(41304806-41304884)
chr2 (140-236)||(34575528-34575617)
chr2 (183-261)||(41303457-41303535)
chr2 (1-65)||(5377686-5377748)
chr2 (1-65)||(24162469-24162527)
chr2 (282-331)||(28568346-28568395)
chr2 (1-40)||(38020161-38020200)
chr2 (1-39)||(13910301-13910339)
chr2 (1-39)||(19007600-19007638)
chr2 (1-39)||(19504602-19504640)
chr2 (1-43)||(23452494-23452536)
chr2 (1-39)||(31733022-31733060)
chr2 (1-43)||(35215843-35215885)
chr2 (1-43)||(35218220-35218262)
chr2 (1-39)||(40032315-40032353)
chr2 (1-39)||(42452743-42452781)
chr2 (1-41)||(21520950-21520990)
chr2 (7-65)||(45280248-45280300)
chr2 (1-39)||(6264402-6264440)
chr2 (285-331)||(15693583-15693629)
chr2 (1-39)||(22163204-22163242)
chr2 (1-39)||(22287593-22287631)
chr2 (1-39)||(27104759-27104797)
chr2 (1-39)||(28196597-28196635)
chr2 (1-39)||(42064475-42064513)
chr2 (6-39)||(17849077-17849110)
chr2 (7-39)||(22874102-22874134)
chr2 (7-39)||(37963190-37963222)
chr2 (1-41)||(42923766-42923806)
chr2 (1-39)||(11739817-11739855)
chr2 (1-39)||(19502268-19502306)
chr2 (1-39)||(22407666-22407704)
chr2 (5-39)||(34979840-34979874)
chr2 (1-39)||(38020103-38020141)
chr2 (282-331)||(41303573-41303623)
chr2 (1-39)||(43623825-43623863)
chr2 (6-43)||(45239238-45239275)
chr2 (7-39)||(18800565-18800597)
[»] scaffold0005 (4 HSPs)
scaffold0005 (92-375)||(51675-51955)
scaffold0005 (282-339)||(50161-50218)
scaffold0005 (1-41)||(52002-52042)
scaffold0005 (222-261)||(170076-170115)
[»] chr8 (54 HSPs)
chr8 (92-339)||(608472-608720)
chr8 (92-375)||(41384459-41384738)
chr8 (92-336)||(15808967-15809208)
chr8 (1-339)||(43529873-43530206)
chr8 (92-339)||(28283567-28283811)
chr8 (140-339)||(3873752-3873952)
chr8 (92-339)||(41382421-41382666)
chr8 (183-339)||(32339096-32339252)
chr8 (224-339)||(3265635-3265750)
chr8 (92-190)||(181434-181530)
chr8 (1-65)||(24873438-24873502)
chr8 (1-65)||(12517281-12517341)
chr8 (175-261)||(11701364-11701447)
chr8 (1-65)||(28283476-28283540)
chr8 (1-43)||(32339345-32339387)
chr8 (1-65)||(14807771-14807829)
chr8 (1-64)||(3886175-3886232)
chr8 (1-65)||(608746-608812)
chr8 (187-258)||(13986214-13986285)
chr8 (1-65)||(22684913-22684981)
chr8 (1-39)||(5622995-5623033)
chr8 (1-39)||(14419448-14419486)
chr8 (1-39)||(15072750-15072788)
chr8 (1-39)||(18810748-18810786)
chr8 (1-39)||(25952561-25952599)
chr8 (1-39)||(26775241-26775279)
chr8 (1-39)||(27107154-27107192)
chr8 (1-39)||(27827026-27827064)
chr8 (1-39)||(27829337-27829375)
chr8 (1-39)||(33541645-33541683)
chr8 (1-39)||(35872635-35872673)
chr8 (1-39)||(37214467-37214505)
chr8 (1-43)||(43082009-43082051)
chr8 (1-39)||(44720883-44720921)
chr8 (1-65)||(4424038-4424096)
chr8 (1-65)||(15809235-15809297)
chr8 (1-38)||(36865579-36865616)
chr8 (1-39)||(1225206-1225244)
chr8 (1-43)||(3874046-3874088)
chr8 (1-39)||(13858741-13858779)
chr8 (285-331)||(13986328-13986374)
chr8 (1-39)||(14477316-14477354)
chr8 (1-39)||(15068021-15068059)
chr8 (1-39)||(18812933-18812971)
chr8 (287-331)||(11701435-11701479)
chr8 (8-39)||(27911055-27911086)
chr8 (8-39)||(27957474-27957505)
chr8 (1-39)||(181577-181615)
chr8 (1-39)||(5372435-5372472)
chr8 (1-39)||(30480760-30480798)
chr8 (92-130)||(32339260-32339298)
chr8 (1-43)||(43079639-43079680)
chr8 (282-331)||(30679208-30679256)
chr8 (7-39)||(21480554-21480586)
[»] scaffold0154 (1 HSPs)
scaffold0154 (92-339)||(11815-12059)
[»] scaffold0031 (2 HSPs)
scaffold0031 (92-339)||(78885-79131)
scaffold0031 (1-39)||(79178-79216)
[»] scaffold0133 (2 HSPs)
scaffold0133 (193-346)||(4541-4694)
scaffold0133 (92-131)||(4722-4761)
[»] scaffold1674 (1 HSPs)
scaffold1674 (247-373)||(1-127)
[»] scaffold0468 (3 HSPs)
scaffold0468 (226-339)||(2070-2183)
scaffold0468 (140-198)||(2022-2080)
scaffold0468 (8-40)||(1895-1927)
[»] scaffold0025 (2 HSPs)
scaffold0025 (1-61)||(69548-69606)
scaffold0025 (1-63)||(73280-73340)
[»] scaffold0008 (1 HSPs)
scaffold0008 (188-258)||(57836-57905)
[»] scaffold0250 (1 HSPs)
scaffold0250 (1-65)||(2853-2911)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-65)||(41740-41798)
[»] scaffold0267 (1 HSPs)
scaffold0267 (1-49)||(24-72)
[»] scaffold0339 (1 HSPs)
scaffold0339 (1-39)||(3990-4028)
[»] scaffold0068 (1 HSPs)
scaffold0068 (1-43)||(29160-29202)
[»] scaffold0552 (1 HSPs)
scaffold0552 (1-65)||(1088-1146)
[»] scaffold0472 (1 HSPs)
scaffold0472 (1-39)||(6192-6230)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-39)||(79852-79890)
[»] scaffold0131 (2 HSPs)
scaffold0131 (1-65)||(14992-15050)
scaffold0131 (1-41)||(14639-14679)
[»] scaffold0533 (1 HSPs)
scaffold0533 (190-237)||(1971-2018)
[»] scaffold0474 (1 HSPs)
scaffold0474 (282-331)||(10443-10492)
[»] scaffold0011 (1 HSPs)
scaffold0011 (343-375)||(35547-35579)


Alignment Details
Target: chr6 (Bit Score: 214; Significance: 1e-117; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 19704826 - 19705163
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaagcaccgaatgcaatgagatggacatcatcataaatt 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||  |   ||  |  | ||   | | | |||||||||    
T  19704826 gttgcctttctaaacccttgtttcagccccctccatctctctctcaaagtttgctctgatacaaggtctatatttatagtgaaatataac-tcataaatt 19704924  T
Q  101 tggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgc 200  Q
    |||||||||||||||||| ||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19704925 tggaacgaatatcacacttaagatacgtttcttttttttctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgc 19705024  T
Q  201 atcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaa 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||    
T  19705025 atcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgaaacaaatcttttatatttttagcaa 19705124  T
Q  301 caatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19705125 caatattcttcttccatcaaattttgagtcatactacaa 19705163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 92 - 339
Target Start/End: Complemental strand, 18317998 - 18317753
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    |||||||||||||||||||| ||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18317998 tcataaatttggaacgaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 18317901  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  18317900 tatatttgcatcaaatcttccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 18317801  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  18317800 ttttagcaacaatattcttcttccttcaaattttgagtcatactacaa 18317753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 94 - 339
Target Start/End: Original strand, 2629234 - 2629477
Alignment:
Q  94 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 193  Q
    ||||||||||||| ||||  |||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2629234 ataaatttggaacaaatactacactgaagatacgttt--ttttttcctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaata 2629331  T
Q  194 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 293  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||    
T  2629332 tatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattt 2629431  T
Q  294 ttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  2629432 ttagcaacaatattcttcttccatcaaattttgagtcatactacaa 2629477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 140 - 339
Target Start/End: Original strand, 5275727 - 5275926
Alignment:
Q  140 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 239  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  5275727 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttatt 5275826  T
Q  240 gtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  5275827 gtccataaatatattttcagcacaaaatatatttgaaataaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 5275926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 92 - 339
Target Start/End: Original strand, 12195857 - 12196102
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||| |||||||||||| |||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12195857 tcataaatttggaacaaataccacactgaagattcgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 12195954  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||       ||||||||||    
T  12195955 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatat 12196054  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||| | |||||||| ||||||||||||||||||    
T  12196055 ttttagcaacaatattctccatccatcaatttttgagtcatactacaa 12196102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 92 - 339
Target Start/End: Original strand, 30034949 - 30035194
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| ||||||||| |||||||||||||         |||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  30034949 tcataaatttggaacaaatatcacattgaagatacgttt--ttattttctccttcagtgaaagaatatctgcatcaaaaatataatattccctttcaaaa 30035046  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||       ||||||||||    
T  30035047 tatatttgcattaaatcgttcttcatacgatacaaaaatatatttattgtctataaatatatttttagcacaaaatatatttgaaacaaatcttttatat 30035146  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||    
T  30035147 ttttagcaacaatattctccatccatcaaattttgagtcatactacaa 30035194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 92 - 339
Target Start/End: Complemental strand, 30967170 - 30966925
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||| |||||||||||| |||||         |||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  30967170 tcataaatttggaacaaataccacactgaagattcgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattcgctttcaaaa 30967073  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  30967072 tatatttgcattaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaataaatcttttatat 30966973  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||| | |||||||||||| ||||||||||||||    
T  30966972 ttttagcaacaatattctccatccatcaaatttggagtcatactacaa 30966925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 93 - 339
Target Start/End: Original strand, 26932913 - 26933156
Alignment:
Q  93 cataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaat 192  Q
    |||||||||||||| |||| |||||||||||| |||||         |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26932913 cataaatttggaacaaataccacactgaagattcgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaat 26933009  T
Q  193 atatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatt 292  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||| ||||       |||||||||||    
T  26933010 atatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataataatattttcagcacaatatatatttgaaacaaatcttttatatt 26933109  T
Q  293 tttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    ||||||||||||||||| | |||||||| ||||||||||||||||||    
T  26933110 tttagcaacaatattctccatccatcaatttttgagtcatactacaa 26933156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 92 - 339
Target Start/End: Complemental strand, 17012017 - 17011781
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    |||||||||||||||||| ||||| ||||||||||||||          |  |||||||||||||||||||||| |||||||||||||||||||||||||    
T  17012017 tcataaatttggaacgaacatcactctgaagatacgttt--------tttttttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 17011926  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||  |||||||||   ||         |||||||||    
T  17011925 tatatttgcatcaaatcgtccatcatacggtacaaaaatatatttattgtccataaatatattttctacacaaaata---tttaaaacaaacttttatat 17011829  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    ||||||||| |||||||||| ||||||||||||| |||||||||||||    
T  17011828 ttttagcaataatattcttcatccatcaaattttaagtcatactacaa 17011781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 92 - 333
Target Start/End: Complemental strand, 17852514 - 17852275
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    |||||||||||||||||||| ||||| |||||||| |||         ||| |||||||||| ||||||||||| |||||||||||||||||||||||||    
T  17852514 tcataaatttggaacgaataccacac-gaagatacttttttttttcttctctttcagtgaaataatatttgcatcaaaaatataatattccctttcaaaa 17852416  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    |||||||||||||||| || ||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||  ||||       ||||||||||    
T  17852415 tatatttgcatcaaatagttcttcataaggtacaaaaatatatttattgtccataaatatattttcagcataaaata--tttgaaacaaatcttttatat 17852318  T
Q  292 ttttagca--acaatattcttcttccatcaaattttgagtcata 333  Q
    ||||||||  |||||||||| | | |||||||||||||||||||    
T  17852317 ttttagcaacacaatattctccat-catcaaattttgagtcata 17852275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 92 - 339
Target Start/End: Original strand, 22858296 - 22858534
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    |||||||||||||||| |||||||  ||||||||||||||        |||||||| ||||||||||||||||| ||||        |||||||||||||    
T  22858296 tcataaatttggaacgtatatcacgttgaagatacgtttcttttttt-ctccttcaatgaaagaatatttgcatcaaaa--------ttccctttcaaaa 22858386  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    |||||||||||| |||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||        ||||||||||    
T  22858387 tatatttgcatctaatcttctttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaagtatatttaaaacaaatcttttatat 22858486  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||  ||||||||||||| |||||||||||||||||||||||||||    
T  22858487 ttttattaacaatattcttcatccatcaaattttgagtcatactacaa 22858534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 175 - 339
Target Start/End: Complemental strand, 20526708 - 20526548
Alignment:
Q  175 aatattccctttcaaaa-tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatcttt 273  Q
    ||||||| ||||||||| ||||||||||||||||| ||||||||||| ||||||||||||| ||     ||||||||||||||||||| ||||||| |||    
T  20526708 aatattctctttcaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatgta-----cataaatatattttcagcataaaatatattt 20526614  T
Q  274 gnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |       ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  20526613 gaaacaaatcttttatatttttagcaacaatattcttcacccatcaaattttgagtcatactacaa 20526548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 175 - 261
Target Start/End: Complemental strand, 30445404 - 30445318
Alignment:
Q  175 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 261  Q
    |||||||| ||| ||||||||||||||||||||| ||||||||| | |||||||||||||||||||| |||||||||||||||||||    
T  30445404 aatattcctttttaaaatatatttgcatcaaatcttccttcatatggtacaaaaatatatttattgttcataaatatattttcagca 30445318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 175 - 261
Target Start/End: Complemental strand, 30443195 - 30443111
Alignment:
Q  175 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 261  Q
    |||||| | ||| |||||| |||||||||||||| ||||| ||||| |||||| |||||||  ||||||||||||||||||||||||    
T  30443195 aatatttcttttaaaaatacatttgcatcaaatcttcctttatacggtacaaacatatatt--ttgtccataaatatattttcagca 30443111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 4816488 - 4816530
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  4816488 gttgcctttctaaacccttgtttcagccccctctatctctctc 4816530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 20915613 - 20915655
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  20915613 gttgcctttctaaacccttgtttcagccccctctatctctctc 20915655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 28241578 - 28241636
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||    
T  28241578 gttgcctttctaaacccttgtttcagccccctctatctct------aagtttgctctgatacaag 28241636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 2629142 - 2629192
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagttt 52  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  2629142 gttgcctttctaaacccttgtttcag-cccctctatctctctctcaaagttt 2629192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 24338705 - 24338743
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24338705 gttgcctttctaaacccttgtttcagccccctctatctc 24338743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 25477331 - 25477293
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25477331 gttgcctttctaaacccttgtttcagccccctctatctc 25477293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 26065043 - 26065001
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  26065043 gttgccattctaaacccttgtttcagccccctctatctctctc 26065001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 26085012 - 26084970
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  26085012 gttgccattctaaacccttgtttcagccccctctatctctctc 26084970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 30967258 - 30967216
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  30967258 gttgtctttctaaacccttgtttcagccccctctatctctctc 30967216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 32447573 - 32447611
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  32447573 gttgcctttctaaacccttgtttcagccccctctatctc 32447611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 13057250 - 13057213
Alignment:
Q  2 ttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13057250 ttgcctttctaaacccttgtttcagccccctctatctc 13057213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 14459022 - 14459080
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||| ||||||||||||||||||      |||||||||||||||||||||    
T  14459022 gttgcctttctaaacccttatttcagccccctctatct------caaagtttgctctgatacaag 14459080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 15541398 - 15541435
Alignment:
Q  2 ttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15541398 ttgcctttctaaacccttgtttcagccccctctatctc 15541435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 8995536 - 8995496
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctc 41  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  8995536 gttgcctttctaaacccttgttttagccccctctatctctc 8995496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 9019983 - 9019943
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctc 41  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  9019983 gttgcctttctaaacccttgttttagccccctctatctctc 9019943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 3390436 - 3390398
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  3390436 gttgcctttctaaacccttgtttcagccccgtctatctc 3390398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 12195772 - 12195810
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  12195772 gttgcttttctaaacccttgtttcagccccctctatctc 12195810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 14507432 - 14507470
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  14507432 gttgcctttctaaacccttgttttagccccctctatctc 14507470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 15532942 - 15532976
Alignment:
Q  5 cctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||    
T  15532942 cctttctaaacccttgtttcagccccctctatctc 15532976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 19227665 - 19227723
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||||| |||||||| |||||      |||||||||||||||||||||    
T  19227665 gttgcctttctaaacccttgtttgagccccctttatct------caaagtttgctctgatacaag 19227723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 30034860 - 30034901
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctct 42  Q
    ||||||||||||||||||||||| ||| ||||||||||||||    
T  30034860 gttgcctttctaaacccttgttttagctccctctatctctct 30034901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 15719705 - 15719673
Alignment:
Q  7 tttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||    
T  15719705 tttctaaacccttgtttcagccccctctatctc 15719673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 284 - 327
Target Start/End: Complemental strand, 12158575 - 12158532
Alignment:
Q  284 ttttatatttttagcaacaatattcttcttccatcaaattttga 327  Q
    ||||||||||||||||||||| |||||| | |||||||||||||    
T  12158575 ttttatatttttagcaacaatcttcttcattcatcaaattttga 12158532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 39
Target Start/End: Complemental strand, 17852592 - 17852561
Alignment:
Q  8 ttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||||||||||    
T  17852592 ttctaaacccttgtttcagccccctctatctc 17852561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 1072134 - 1072172
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||||| || ||||||||    
T  1072134 gttgcctttctaaacccttgtttcagctccttctatctc 1072172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 1230506 - 1230544
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  1230506 gttgcctttctaaacccttgtttcaaccctctctatctc 1230544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 3630121 - 3630159
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  3630121 gttgcctttctaaaccgatgtttcagccccctctatctc 3630159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 3632195 - 3632233
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  3632195 gttgcctttctaaacccttgtttcaactccctctatctc 3632233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 11983286 - 11983324
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||| || ||||||||||||||||||||||    
T  11983286 gttgcctttctaagcctttgtttcagccccctctatctc 11983324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 26932820 - 26932885
Alignment:
Q  2 ttgcctttctaaacccttgtttcagccccctcta--tctctctcgcaaagtttgctctgatacaag 65  Q
    |||| ||||||| ||||||||||| |||||||||  |||||||| ||||||||||| ||| |||||    
T  26932820 ttgcttttctaagcccttgtttcaaccccctctatctctctctctcaaagtttgctatgaaacaag 26932885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 3233988 - 3234025
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatct 38  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  3233988 gttgtctttctaaatccttgtttcagccccctctatct 3234025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 13039810 - 13039773
Alignment:
Q  2 ttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||||| ||| ||||||    
T  13039810 ttgcctttctaaacccttgtttcagcctcctatatctc 13039773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 131
Target Start/End: Complemental strand, 20526780 - 20526744
Alignment:
Q  95 taaatttggaacgaatatcacactgaagatacgtttc 131  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  20526780 taaatttggaacgaatatcacattgaagatgcgtttc 20526744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 331
Target Start/End: Complemental strand, 30443069 - 30443022
Alignment:
Q  286 ttatatttttagcaacaatattcttcttccatc--aaattttgagtca 331  Q
    ||||||||||| |||||||||||||| ||||||  |||||||||||||    
T  30443069 ttatatttttaacaacaatattcttcatccatcataaattttgagtca 30443022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 193; Significance: 1e-105; HSPs: 85)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 92 - 373
Target Start/End: Original strand, 31735869 - 31736147
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  31735869 tcataaatttggaacaaataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 31735965  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  31735966 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 31736065  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatg 373  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  31736066 ttttagcaacaatattctccttccatcaaattttgagtcatactacaacattctccaccttgactctaaattagtgatgatg 31736147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 92 - 339
Target Start/End: Original strand, 15295192 - 15295437
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||| |||||||||| |||||||||||||| |||         |||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  15295192 tcataaattaggaacgaataccacactgaagatacattt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattcgctttcaaaa 15295289  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  15295290 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 15295389  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15295390 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 15295437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 141 - 373
Target Start/End: Original strand, 27337332 - 27337564
Alignment:
Q  141 tccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattg 240  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  27337332 tccttcagttaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattg 27337431  T
Q  241 tccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaaa 340  Q
    ||||||||||||||||||||||||||||| ||||       |||| ||||||||||||||||||||||  | |||||||||||| ||||||||||||||     
T  27337432 tccataaatatattttcagcacaaaatatatttgaaacaaatcttatatatttttagcaacaatattccccatccatcaaatttggagtcatactacaac 27337531  T
Q  341 attctcaaccttgactccaaattagtgatgatg 373  Q
    |||||| |||||||||| |||||||||||||||    
T  27337532 attctccaccttgactctaaattagtgatgatg 27337564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 47906292 - 47905958
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaagcaccgaatgca-atgagatggacatcatcataaat 99  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||  |   ||  | |  | | | | | | ||||||||    
T  47906292 gttgccattctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataac-tcataaat 47906194  T
Q  100 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 199  Q
    ||||||| |||| |||||||||||||| |||         |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  47906193 ttggaacaaataccacactgaagatactttt----tttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 47906098  T
Q  200 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 299  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  47906097 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 47905998  T
Q  300 acaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  47905997 acaatattctccatccatcaaattttgagtcatactacaa 47905958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 92 - 339
Target Start/End: Original strand, 17324980 - 17325225
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    |||||||||||||||||||||||| ||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17324980 tcataaatttggaacgaatatcaccctgaagatacgttt--tttttttctccttcagtgaaagaatatttgcataaaaaatataatattcccttgcaaaa 17325077  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    |||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||| | |||||||| ||||       ||||||||||    
T  17325078 tatatttgcatcaaatcgtttttcatacggtacaaaaatatatttattgtccataaatatattttcaactcaaaatatatttgaaacaaatcttttatat 17325177  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||    
T  17325178 ttttagcaacaatattctccatccatcaaattttgagtcatactacaa 17325225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 92 - 339
Target Start/End: Complemental strand, 39932008 - 39931764
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||||||||  |||||||||||||||||         |||||||| | ||||||||||||||| |||| ||||||||||||||||||||    
T  39932008 tcataaatttggaacgaatactacactgaagatacgttt---ttttttctccttcaataaaagaatatttgcatcaaaagtataatattccctttcaaaa 39931912  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  39931911 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 39931812  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||    
T  39931811 ttttagcaacaatattctccatccatcaaattttgagtcatactacaa 39931764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 9463503 - 9463838
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaagcaccgaatgcaatg-agatggacatcatcataaat 99  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||  |   ||  |  | | | | | | | ||||||||    
T  9463503 gttgcctttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataac-tcataaat 9463601  T
Q  100 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 199  Q
    ||||||| |||| |||| |||||||||||||         |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9463602 ttggaacaaataccacaatgaagatacgttt---ttttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 9463698  T
Q  200 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 299  Q
    ||| |||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  9463699 cattaaattgttcttcatacgatataaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 9463798  T
Q  300 acaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  9463799 acaatattctccatccatcaaattttgagtcatactacaa 9463838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 140 - 339
Target Start/End: Complemental strand, 24325548 - 24325349
Alignment:
Q  140 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 239  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24325548 ctccttcagtgaaagaatatttgcatcaaaaatataatattcactttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttatt 24325449  T
Q  240 gtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    ||||||||||||||||||||||||| |||| ||||       |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  24325448 gtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 24325349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 92 - 309
Target Start/End: Original strand, 21948535 - 21948751
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    |||||||||||||||||||| ||||||||||||||||||         ||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  21948535 tcataaatttggaacgaataccacactgaagatacgttt-tttttttcctccttctgtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 21948633  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  21948634 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 21948733  T
Q  292 ttttagcaacaatattct 309  Q
    ||||||||||||||||||    
T  21948734 ttttagcaacaatattct 21948751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 143 - 339
Target Start/End: Complemental strand, 48665050 - 48664854
Alignment:
Q  143 cttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtc 242  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||    
T  48665050 cttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatgtgcatcaaatcgttcttcatacggtacaaaaatatatttattgtc 48664951  T
Q  243 cataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    ||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  48664950 cataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 48664854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 92 - 339
Target Start/End: Original strand, 9459767 - 9460011
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||| |||| |||||||||||||         |||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  9459767 tcataaatttggaacaaataccacaatgaagatacgttt---ttttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaa 9459863  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||| |||| || ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  9459864 tatatttgcattaaattgttcttcatacggtataaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 9459963  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||    
T  9459964 ttttagcaacaatattctccatccatcaaattttgagtcatactacaa 9460011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 92 - 339
Target Start/End: Original strand, 27339478 - 27339728
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||| ||||||||||||||||| |         ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27339478 tcataaatttggaacaaataccacactgaagatacgtt-cttttttttttccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 27339576  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataa----atatattttcagcacaaaatatctttgnnnnnnntctttt 287  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||| ||||       ||||||    
T  27339577 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatatattttcagcacaaaatatatttgaaacaaatctttt 27339676  T
Q  288 atatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||||||| | ||| |||||||| ||||||||||||||    
T  27339677 atatttttagcaacaatattctccatccgtcaaatttggagtcatactacaa 27339728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 143 - 336
Target Start/End: Original strand, 2949617 - 2949810
Alignment:
Q  143 cttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtc 242  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||    
T  2949617 cttcagtgaaagaatatttgtatcaaaaatataatattccctttcaaaatatatttgcatcaaatcattcttcatacaatacaaaaatatatttattgtc 2949716  T
Q  243 cataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatacta 336  Q
    ||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  2949717 cataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatgaaattttgagtcatacta 2949810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 156 - 339
Target Start/End: Original strand, 6115532 - 6115716
Alignment:
Q  156 atatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattt 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6115532 atatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtcattcatacgatacaaaaatatatttattgtccataaatatattt 6115631  T
Q  256 tcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaa-ttttgagtcatactacaa 339  Q
    |||||||||||||| ||||       |||||||||||||||||||||||||||| | ||||||||| ||||||||||| ||||||    
T  6115632 tcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttttgagtcatcctacaa 6115716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 140 - 339
Target Start/End: Original strand, 28998643 - 28998842
Alignment:
Q  140 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 239  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  | |||| |||| ||||||||| ||||||||    
T  28998643 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatatttcttcgtacggtacaaaaatgtatttatt 28998742  T
Q  240 gtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||||||||||||||| |||        ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||    
T  28998743 gtccataaatatattttcagcacaaaatatattttaaacaaatcttttatagttttagcaacaatattctccatccatcaaattttgagtcatactacaa 28998842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 140 - 339
Target Start/End: Original strand, 29004359 - 29004558
Alignment:
Q  140 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 239  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  | |||| |||| ||||||||| ||||||||    
T  29004359 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatatttcttcgtacggtacaaaaatgtatttatt 29004458  T
Q  240 gtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||||||||||||||| |||        ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||    
T  29004459 gtccataaatatattttcagcacaaaatatattttaaacaaatcttttatagttttagcaacaatattctccatccatcaaattttgagtcatactacaa 29004558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 151 - 339
Target Start/End: Original strand, 45693834 - 45694022
Alignment:
Q  151 aaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaata 250  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  45693834 aaagaatatttgcataaaaaatatattattctctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaata 45693933  T
Q  251 tattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||| |||||||||||| ||||       |||||||||||||||||||||||||||| | ||||||||||||||| ||||| |||||    
T  45693934 tatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgaatcatagtacaa 45694022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 149 - 339
Target Start/End: Original strand, 4131690 - 4131880
Alignment:
Q  149 tgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatattta-ttgtccataa 247  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||    
T  4131690 tgaaagaatatttgcatcaaaa-tataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttatttgtccataa 4131788  T
Q  248 atatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||| |||| |||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  4131789 atatatgttcaacacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 4131880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 153 - 373
Target Start/End: Complemental strand, 6997395 - 6997182
Alignment:
Q  153 agaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatata 252  Q
    ||||||||||||| ||||||||||||||| |||||||      ||||||||||||||| ||||||||| || ||||||||||||||||||||||| ||||    
T  6997395 agaatatttgcatcaaaaatataatattctctttcaa------tttgcatcaaatcgttcttcatacggtataaaaatatatttattgtccataa-tata 6997303  T
Q  253 ttttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaacctt 352  Q
    |||| |||||||||||| ||||       ||||||||||||||||||| |||||||| | |||||||||||||||||||||||| || |||||| |||||    
T  6997302 tttttagcacaaaatatatttgaaacaaatcttttatatttttagcaataatattctccatccatcaaattttgagtcatactataacattctccacctt 6997203  T
Q  353 gactccaaattagtgatgatg 373  Q
    ||||| |||||||||||||||    
T  6997202 gactctaaattagtgatgatg 6997182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 143 - 303
Target Start/End: Complemental strand, 6996221 - 6996067
Alignment:
Q  143 cttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtc 242  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||      ||| ||||||||||| ||||||||| ||||||||||||| |||||||    
T  6996221 cttcagtgaaagaatatttgcaacaaaaatataatattccctttcaa------tttacatcaaatcgttcttcatacggtacaaaaatatatgtattgtc 6996128  T
Q  243 cataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaa 303  Q
    ||||||||||||||||||||||||||| ||||       ||||||||||||||||||||||    
T  6996127 cataaatatattttcagcacaaaatatatttgaaacaagtcttttatatttttagcaacaa 6996067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 92 - 229
Target Start/End: Original strand, 46432072 - 46432207
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||| |||| |||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  46432072 tcataaatttggaacaaataccacagtgaagatacgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 46432169  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaa 229  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  46432170 tatatttgcatcaaatcgttcttcatacgatacaaaaa 46432207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 226 - 339
Target Start/End: Original strand, 46432521 - 46432634
Alignment:
Q  226 aaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaatttt 325  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||||    
T  46432521 aaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttt 46432620  T
Q  326 gagtcatactacaa 339  Q
    ||||||||||||||    
T  46432621 gagtcatactacaa 46432634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 188 - 339
Target Start/End: Complemental strand, 16561284 - 16561133
Alignment:
Q  188 aaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntctttt 287  Q
    ||||||||||||  ||||||  ||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||| ||||       | ||||    
T  16561284 aaaatatatttgtttcaaatattccttcatacggtacaaaaagatatttattgtcaataaatatattttcagcacaaaatatatttgaaacaaatatttt 16561185  T
Q  288 atatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||| ||||    
T  16561184 atatttttagcaacaatattcttcatccaacaaattttgaatcatacaacaa 16561133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 175 - 261
Target Start/End: Original strand, 11693580 - 11693666
Alignment:
Q  175 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 261  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11693580 aatattccctttaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatttattgtccataaatatattttcagca 11693666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 2510722 - 2510801
Alignment:
Q  140 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatac 219  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  2510722 ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttcttcatac 2510801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 175 - 261
Target Start/End: Original strand, 13785662 - 13785748
Alignment:
Q  175 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 261  Q
    |||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||| | || ||||||||||||||||||    
T  13785662 aatattccttttaaaaatatatttgcatcaaatcttccttcatacgatacaaaaatatatttactatctataaatatattttcagca 13785748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 26520463 - 26520580
Alignment:
Q  94 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnn----ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaa 189  Q
    ||||||||||||||||||||||||||||||||| ||||            || |||| |||||||||||||||||| |||||||||||||||||||||||    
T  26520463 ataaatttggaacgaatatcacactgaagatacatttcttttgtttttttcttcttcggtgaaagaatatttgcatcaaaaatataatattccctttcaa 26520562  T
Q  190 aatatatttgcatcaaat 207  Q
    ||||||||||||||||||    
T  26520563 aatatatttgcatcaaat 26520580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 14352842 - 14352759
Alignment:
Q  175 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttca 258  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||| | | ||||||||||||||||    
T  14352842 aatattccctttaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatttactattcataaatatattttca 14352759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 6115479 - 6115541
Alignment:
Q  140 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcat 202  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6115479 ctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcat 6115541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 28842517 - 28842457
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||    
T  28842517 gttgcctttctaaacccttgtttcagccccctctatctct----caaagtttgctctgatacaag 28842457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 47177384 - 47177322
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||| ||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||    
T  47177384 gttgcttttctaaacccttgtttcagccccctctatctctct--caaagtttgctttgatacaag 47177322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 47179735 - 47179673
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||| ||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||    
T  47179735 gttgcttttctaaacccttgtttcagccccctctatctctct--caaagtttgctttgatacaag 47179673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 9459676 - 9459740
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||    
T  9459676 gttgactttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaag 9459740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 10115653 - 10115572
Alignment:
Q  175 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttca 258  Q
    |||||||| ||| ||||||||||||||||||||  |||||||||||  | ||||  ||||||||||||||||||||||||||||    
T  10115653 aatattccgtttaaaaatatatttgcatcaaatattccttcatacgggataaaa--atatttattgtccataaatatattttca 10115572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 24325685 - 24325620
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc--tctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||| |||||||||||||||||||||||||  |||| |||||||||||||||||||||    
T  24325685 gttgcctttctaa-cccttgtttcagccccctctatctctctctctcaaagtttgctctgatacaag 24325620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 21948446 - 21948488
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  21948446 gttgcctttctaaacccttgtttcagccccctctatctctctc 21948488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 27337197 - 27337239
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27337197 gttgcctttctaaacccttgtttcagccccctctatctctctc 27337239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Complemental strand, 32260883 - 32260833
Alignment:
Q  211 ccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 261  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  32260883 ccttcatacggtacaaaaatatatttattgttcataaatatattttcagca 32260833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 6823037 - 6822979
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||    
T  6823037 gttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaag 6822979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 20302481 - 20302423
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||    
T  20302481 gttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaag 20302423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 331
Target Start/End: Complemental strand, 32260795 - 32260746
Alignment:
Q  282 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 331  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  32260795 tcttttatatttttagcaacaatcttcttcatccatcaaattttgagtca 32260746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 39932095 - 39932055
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctc 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  39932095 gttgcctttctaaacccttgtttcagccccctctatctctc 39932055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 25127894 - 25127843
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagttt 52  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||| ||||    
T  25127894 gttgcctttctaaacccttgtttcaggcccctctatctctctctcaaggttt 25127843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 2510583 - 2510625
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  2510583 gttgcctttataaacccttgtttcagccccctctatctctctc 2510625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 12302764 - 12302806
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  12302764 gttgcatttctaaacccttgtttcagccccctctatctctctc 12302806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 222 - 268
Target Start/End: Original strand, 13112047 - 13112093
Alignment:
Q  222 tacaaaaatatatttattgtccataaatatattttcagcacaaaata 268  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||    
T  13112047 tacaaaaatatatttattgtccatgaatatattttcagcataaaata 13112093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 13215103 - 13215065
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13215103 gttgcctttctaaacccttgtttcagccccctctatctc 13215065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 15295093 - 15295135
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  15295093 gttgcctttctaaacccttgtttcagccctctctatctctctc 15295135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 17318915 - 17318877
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17318915 gttgcctttctaaacccttgtttcagccccctctatctc 17318877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 18307131 - 18307093
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18307131 gttgcctttctaaacccttgtttcagccccctctatctc 18307093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 25248773 - 25248811
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25248773 gttgcctttctaaacccttgtttcagccccctctatctc 25248811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 27339389 - 27339431
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  27339389 gttgcctttctaagcccttgtttcagccccctctatctctctc 27339431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 31423133 - 31423171
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  31423133 gttgcctttctaaacccttgtttcagccccctctatctc 31423171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 51750061 - 51750023
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  51750061 gttgcctttctaaacccttgtttcagccccctctatctc 51750023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 16428675 - 16428638
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatct 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16428675 gttgcctttctaaacccttgtttcagccccctctatct 16428638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 6823907 - 6823848
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    |||||||||||||||||||||||||||||||     |||| || |||||||||||||||||||||    
T  6823907 gttgcctttctaaacccttgtttcagccccc-----ctctatctcaaagtttgctctgatacaag 6823848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 15823568 - 15823529
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctct 40  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  15823568 gttgcctttctaaacccttgtttcagccccctttatctct 15823529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 28840698 - 28840642
Alignment:
Q  5 cctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||| |||||| |||||||    |||||||||||||||||||||    
T  28840698 cctttctaaacccttgtttcatccccctgtatctct----caaagtttgctctgatacaag 28840642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 13761859 - 13761821
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  13761859 gttgcctttctaaacccttgtttcagccctctctatctc 13761821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 17186387 - 17186425
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  17186387 gttgcctttctaaacccttatttcagccccctctatctc 17186425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 18839609 - 18839571
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  18839609 gttgcctatctaaacccttgtttcagccccctctatctc 18839571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 28207325 - 28207363
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  28207325 gttgtctttctaaacccttgtttcagccccctctatctc 28207363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 31425278 - 31425316
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  31425278 gttgcctttctaaacccttgtttcagccccctttatctc 31425316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 31735780 - 31735818
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  31735780 gttgcctttctaaacccttgttttagccccctctatctc 31735818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 41646942 - 41646904
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  41646942 gttgcctttctaaacccttatttcagccccctctatctc 41646904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 2617538 - 2617480
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    |||| ||||||||||||||||||||||| |||||||||      |||||||||||||||||||||    
T  2617538 gttgtctttctaaacccttgtttcagcctcctctatct------caaagtttgctctgatacaag 2617480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 50079085 - 50079118
Alignment:
Q  6 ctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||||||||||||    
T  50079085 ctttctaaacccttgtttcagccccctctatctc 50079118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 4131638 - 4131678
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctc 41  Q
    |||||| ||||||| ||||||||||||||||||||||||||    
T  4131638 gttgccattctaaatccttgtttcagccccctctatctctc 4131678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 6115344 - 6115376
Alignment:
Q  7 tttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||    
T  6115344 tttctaaacccttgtttcagccccctctatctc 6115376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 39
Target Start/End: Original strand, 2949497 - 2949528
Alignment:
Q  8 ttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||||||||||    
T  2949497 ttctaaacccttgtttcagccccctctatctc 2949528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 39
Target Start/End: Original strand, 10400094 - 10400125
Alignment:
Q  8 ttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||||||||||    
T  10400094 ttctaaacccttgtttcagccccctctatctc 10400125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 284 - 331
Target Start/End: Original strand, 11693706 - 11693753
Alignment:
Q  284 ttttatatttttagcaacaatattcttcttccatcaaattttgagtca 331  Q
    ||||||| ||||||||| ||| |||||| |||||||||||||||||||    
T  11693706 ttttataattttagcaataatcttcttcatccatcaaattttgagtca 11693753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 46431966 - 46432009
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccc-tctatctctctc 43  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||    
T  46431966 gttgcctttctaaacccttgtttcagcccccatctctctctctc 46432009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 6995959 - 6995997
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  6995959 gttgcctttctaaaccgttgtttcggccccctctatctc 6995997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 11457734 - 11457772
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||| ||||||||||| ||||||||||||||||||||||    
T  11457734 gttgtctttctaaaccattgtttcagccccctctatctc 11457772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 16231623 - 16231585
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||| |||||| ||||||||||||||||||||||||||    
T  16231623 gttgcttttctagacccttgtttcagccccctctatctc 16231585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 20291479 - 20291441
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  20291479 gttgcctttctaaacccttgtttcatctccctctatctc 20291441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 25251534 - 25251572
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||| ||||||||||| ||||||||||||||||||||||    
T  25251534 gttgtctttctaaacctttgtttcagccccctctatctc 25251572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 31489933 - 31489899
Alignment:
Q  5 cctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||| |||||||||||||    
T  31489933 cctttctaaacccttgtttcaaccccctctatctc 31489899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 38925737 - 38925775
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  38925737 gttgcctttctgaactcttgtttcagccccctctatctc 38925775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 51752383 - 51752349
Alignment:
Q  5 cctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||| |||||||||||||||||||||||    
T  51752383 cctttctaaactcttgtttcagccccctctatctc 51752349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 331
Target Start/End: Original strand, 13785786 - 13785835
Alignment:
Q  282 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 331  Q
    ||||| ||||||||||| |||||||||| | |||||||| ||||||||||    
T  13785786 tctttcatatttttagcgacaatattctccatccatcaatttttgagtca 13785835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 331
Target Start/End: Complemental strand, 10115506 - 10115466
Alignment:
Q  291 tttttagcaacaatattcttcttccatcaaattttgagtca 331  Q
    ||||| ||||||||||||||  |||||||||||||||||||    
T  10115506 ttttttgcaacaatattcttaatccatcaaattttgagtca 10115466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 48665199 - 48665167
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctc 33  Q
    ||||||||||||||||||||||||| |||||||    
T  48665199 gttgcctttctaaacccttgtttcaaccccctc 48665167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 39
Target Start/End: Original strand, 49495468 - 49495496
Alignment:
Q  11 taaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||    
T  49495468 taaacccttgtttcagccccctctatctc 49495496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 191; Significance: 1e-103; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 375
Target Start/End: Complemental strand, 27912558 - 27912185
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaagcaccgaatgca-atgagatggacatcatcataaat 99  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||   ||||||||||  |   ||  | |  | | | | | | ||||||||    
T  27912558 gttgcctttctaaacccttgtttcagcaccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataac-tcataaat 27912460  T
Q  100 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 199  Q
    ||||||| |||||||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27912459 ttggaacaaatatcacactgaagatacgttt-ttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 27912361  T
Q  200 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 299  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  27912360 catcaaatcgtttttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 27912261  T
Q  300 acaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatgtc 375  Q
    |||||||||| | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||    
T  27912260 acaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattagtgatgatgtc 27912185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 92 - 373
Target Start/End: Complemental strand, 18468944 - 18468666
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||| |||||||||||||| |||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18468944 tcataaatttggaacaaataccacactgaagatactttt---tattttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 18468848  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  18468847 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 18468748  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatg 373  Q
    ||||||||| |||||||| | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  18468747 ttttagcaaaaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattagtgatgatg 18468666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 92 - 339
Target Start/End: Complemental strand, 25803953 - 25803709
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| ||||| |||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25803953 tcataaatttggaacaaatattacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 25803857  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  25803856 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 25803757  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||    
T  25803756 ttttagcaacaatattctccatccatcaaattttgagtcatactacaa 25803709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 92 - 373
Target Start/End: Original strand, 18509661 - 18509939
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    |||||||||||| | ||||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18509661 tcataaatttgggatgaataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 18509757  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |       ||||||||||    
T  18509758 tatatttgcatcaaatcattcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatattcgaaataaatcttttatat 18509857  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatg 373  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||  |||||| |||||||||  |||||||||||||||    
T  18509858 ttttagcaacaatattctccatccatcaaattttgagtcatactacaccattctccaccttgactttaaattagtgatgatg 18509939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 92 - 341
Target Start/End: Original strand, 18511556 - 18511802
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    |||||||||||||||||||| |||||| |||||||||||         |||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  18511556 tcataaatttggaacgaataccacactaaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatatttcctttcaaaa 18511652  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |       ||||||||||    
T  18511653 tatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatattcgaaacaaatcttttatat 18511752  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaa 341  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18511753 ttttagcaacaatattcttcatccatcaaattttgagtcatactacaaaa 18511802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 92 - 373
Target Start/End: Original strand, 26098593 - 26098873
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||| |||||||||||| |||| |||||||||||||         |||||||| ||||||||| |||| || |||||||||||||||||||||||||    
T  26098593 tcataaaattggaacgaataccacattgaagatacgttt-ttttatttctccttcaatgaaagaatttttgtatcaaaaatataatattccctttcaaaa 26098691  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  26098692 tatatttgcatcaaatcgttctttatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 26098791  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatg 373  Q
    ||||||||| |||||||| | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  26098792 ttttagcaataatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattagtgatgatg 26098873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 92 - 345
Target Start/End: Complemental strand, 27910382 - 27910131
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||| |||||||||||||| |||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27910382 tcataaatttggaacaaataccacactgaagatactttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 27910285  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  27910284 tatatttgcatcaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 27910185  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattct 345  Q
    ||||||||| |||||||| | ||||||||||||||||||||||||||| |||||    
T  27910184 ttttagcaataatattctccatccatcaaattttgagtcatactacaacattct 27910131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 92 - 339
Target Start/End: Original strand, 3373383 - 3373628
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||| ||||||||||||||||||         |||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  3373383 tcataaatttggaacaaataccacactgaagatacgttt--tttttttctccttcagtgaaaaaatatttgcatcaaaaatataatattccctttcaaaa 3373480  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||       ||||||||||    
T  3373481 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatat 3373580  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||| | ||||||||||| |||||||||||||||    
T  3373581 ttttagcaacaatattctccatccatcaaattctgagtcatactacaa 3373628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 92 - 339
Target Start/End: Complemental strand, 15552172 - 15551927
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||| ||| ||||||||||||||         |||||||||||||||||||||||||| |||||| | ||||||||||||||||    
T  15552172 tcataaatttggaacaaataccacgctgaagatacgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatgtcatattccctttcaaaa 15552075  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||       ||||||||||    
T  15552074 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatcttcagcacaatatatatttgaaacaaatcttttatat 15551975  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||    
T  15551974 ttttagcaacaatattctccatccatcaaattttgagtcatactacaa 15551927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 92 - 321
Target Start/End: Complemental strand, 10586776 - 10586549
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10586776 tcataaatttggaacaaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 10586679  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  10586678 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 10586579  T
Q  292 ttttagcaacaatattcttcttccatcaaa 321  Q
    |||||||||||||||||  | |||||||||    
T  10586578 ttttagcaacaatattccccatccatcaaa 10586549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 92 - 339
Target Start/End: Complemental strand, 26097670 - 26097423
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctt--tcaa 189  Q
    |||||||||||||||||||| |||||||||||||| |||         |||||||||||||||||||||||||| |||||||||| ||| ||||  ||||    
T  26097670 tcataaatttggaacgaataccacactgaagatacattt--ttttttcctccttcagtgaaagaatatttgcatcaaaaatataacatttccttcttcaa 26097573  T
Q  190 aatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttat 289  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||       | ||||||    
T  26097572 aatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagtacaaaatatatttgaaacaaattttttat 26097473  T
Q  290 atttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||    
T  26097472 atttttagcaacaatattctccatccatcaaattttgagtcatactacaa 26097423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 92 - 339
Target Start/End: Complemental strand, 18596584 - 18596328
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    |||||||||||||||||||| ||||||||||||||||||         |||||||||||| |||||||||| || ||||||||||||||| |||||||||    
T  18596584 tcataaatttggaacgaataccacactgaagatacgttt--tttttttctccttcagtgatagaatatttgtatcaaaaatataatattctctttcaaaa 18596487  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatat-----------ttattgtccataaatatattttcagcacaaaatatctttgnnnnnn 280  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||           |||||||||||||||||||||||| |||||||||| ||||          
T  18596486 tatatttgcatcaaatcgttctttatacggtacaaaaatatatttatggtatatttattgtccataaatatattttcaacacaaaatatatttgaaacaa 18596387  T
Q  281 ntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
     |||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||    
T  18596386 atcttttatatttttagcaacaatattctccatccatcaaattttgagtcatagtacaa 18596328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 92 - 261
Target Start/End: Complemental strand, 18466617 - 18466453
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||| |||||||||||||| |||         |||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  18466617 tcataaatttggaacaaataccacactgaagatactttt-----ttttctcctttagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 18466523  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 261  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18466522 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatttttagca 18466453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 158 - 339
Target Start/End: Complemental strand, 21288713 - 21288531
Alignment:
Q  158 atttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgata-caaaaatatatttattgtccataaatatatttt 256  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || | |||||||||||||||||||||||||||||||    
T  21288713 atttgcatcaaaaatataatattccctttcaaaatatatttgcataaaatcgttcttcatacggtaccgaaaatatatttattgtccataaatatatttt 21288614  T
Q  257 cagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    ||||||||||||| |||        |||||| ||||||||||||||||||||| | ||||||||||||||||| |||||||||    
T  21288613 cagcacaaaatatattttaaacaaatcttttttatttttagcaacaatattctccatccatcaaattttgagttatactacaa 21288531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 189 - 334
Target Start/End: Original strand, 17415748 - 17415893
Alignment:
Q  189 aaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntctttta 288  Q
    |||||||||||||||||||  ||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||    
T  17415748 aaatatatttgcatcaaattttccttcatacagtacaaaaatatatttattgtccataaatatattttcagcaaaaaatatatttgaaacaaatctttta 17415847  T
Q  289 tatttttagcaacaatattcttcttccatcaaattttgagtcatac 334  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  17415848 tatttttagcaacaatattcttcatccatcaaattttgagtcatac 17415893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 92 - 261
Target Start/End: Complemental strand, 15143425 - 15143262
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnc-tccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaa 190  Q
    ||||||||||| |||| ||||||| |||||||||||||||        | | ||||||||||||||||||||||| |||       ||||||||||||||    
T  15143425 tcataaatttgtaacggatatcacgctgaagatacgtttcttttttccccttcttcagtgaaagaatatttgcatcaaa-------tattccctttcaaa 15143333  T
Q  191 atatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 261  Q
    |||||||||||||||||| ||||||||| | ||||||||| ||||||||||||||||||||||||| ||||    
T  15143332 atatatttgcatcaaatcttccttcatatggtacaaaaatgtatttattgtccataaatatatttttagca 15143262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 237 - 339
Target Start/End: Original strand, 6661929 - 6662031
Alignment:
Q  237 attgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatacta 336  Q
    |||||||||||||||||||||| |||||||||| ||||       | |||||||||||||||||||||||||||| |||||||| |||| ||||||||||    
T  6661929 attgtccataaatatattttcaacacaaaatatatttgaaacaaatattttatatttttagcaacaatattcttcatccatcaagttttaagtcatacta 6662028  T
Q  337 caa 339  Q
    |||    
T  6662029 caa 6662031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 4410083 - 4410021
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  4410083 gttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttgctctgatacaag 4410021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 40221408 - 40221340
Alignment:
Q  140 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatc 208  Q
    ||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||| | ||||||    
T  40221408 ctcctgcagtgaaagaatatttgcatcaaaaatataatattccttttcaaaatatatttgaaacaaatc 40221340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 339
Target Start/End: Complemental strand, 40221341 - 40221284
Alignment:
Q  282 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||||||||||||||| || || |||||||||||||||||||||    
T  40221341 tcttttatatttttagcaacaatattcttcatcaattaaattttgagtcatactacaa 40221284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 339
Target Start/End: Complemental strand, 18466465 - 18466413
Alignment:
Q  287 tatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  18466465 tatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 18466413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 18469033 - 18468991
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  18469033 gttgcctttctaaacccttgtttcagccccctctatctctctc 18468991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 34477311 - 34477353
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  34477311 gttgcctttctaaacccttgtttcagccccctctatctctctc 34477353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 34479676 - 34479718
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  34479676 gttgcctttctaaacccttgtttcagccccctctatctctctc 34479718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 336
Target Start/End: Complemental strand, 15143274 - 15143225
Alignment:
Q  287 tatatttttagcaacaatattcttcttccatcaaattttgagtcatacta 336  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  15143274 tatatttttagcaacaatattctccatccatcaaattttgagtcatacta 15143225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 18466706 - 18466644
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||   ||||||||||    
T  18466706 gttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttagcctgatacaag 18466644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 1189866 - 1189908
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  1189866 gttgcctttctaaactcttgtttcagccccctctatctctctc 1189908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 2174941 - 2174903
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2174941 gttgcctttctaaacccttgtttcagccccctctatctc 2174903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 20507719 - 20507757
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20507719 gttgcctttctaaacccttgtttcagccccctctatctc 20507757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 21684708 - 21684750
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  21684708 gttgcctttttaaacccttgtttcagccccctctatctctctc 21684750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 31542757 - 31542719
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  31542757 gttgcctttctaaacccttgtttcagccccctctatctc 31542719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 25921730 - 25921788
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    |||| |||||||||||||||||||||||||||||||||      |||||||||||||||||||||    
T  25921730 gttgtctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaag 25921788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 16092457 - 16092497
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctc 41  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  16092457 gttgcctttctaaacccttgtttcaaccccctctatctctc 16092497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 6747328 - 6747289
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctct 40  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  6747328 gttgcttttctaaacccttgtttcagccccctctatctct 6747289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 2818597 - 2818631
Alignment:
Q  5 cctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||    
T  2818597 cctttctaaacccttgtttcagccccctctatctc 2818631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15552267 - 15552225
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    ||||| |||||||||||||||||||| ||||||||||||||||    
T  15552267 gttgcttttctaaacccttgtttcagtcccctctatctctctc 15552225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 16776180 - 16776142
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  16776180 gttgcctttgtaaacccttgtttcagccccctctatctc 16776142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 17072905 - 17072867
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  17072905 gttgtctttctaaacccttgtttcagccccctctatctc 17072867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 20043072 - 20043034
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  20043072 gttgcctttctaaacacttgtttcagccccctctatctc 20043034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 25804047 - 25804005
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    |||||| |||||||||||||||| |||||||||||||||||||    
T  25804047 gttgccattctaaacccttgtttgagccccctctatctctctc 25804005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 25904125 - 25904087
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  25904125 gttgtctttctaaacccttgtttcagccccctctatctc 25904087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 31179628 - 31179666
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  31179628 gttgcctttctaaacccttgtttcagctccctctatctc 31179666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 31472870 - 31472908
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  31472870 gttgcctttctaaacccttgttttagccccctctatctc 31472908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 31545102 - 31545064
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  31545102 gttgcctttctaaacccttgtttcagccccctttatctc 31545064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 40221544 - 40221506
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  40221544 gttgccattctaaacccttgtttcagccccctctatctc 40221506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 10529356 - 10529414
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||||||| ||| ||||||||      |||||||||||||||||||||    
T  10529356 gttgcctttctaaacccttgtttcaacccactctatct------caaagtttgctctgatacaag 10529414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 18511476 - 18511509
Alignment:
Q  8 ttctaaacccttgtttcagccccctctatctctc 41  Q
    ||||||||||||||||||||||||||||||||||    
T  18511476 ttctaaacccttgtttcagccccctctatctctc 18511509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 39854505 - 39854448
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    |||||||||||||||||||||||||| |||||||||||      |||||||||||||||||||||    
T  39854505 gttgcctttctaaacccttgtttcag-cccctctatct------caaagtttgctctgatacaag 39854448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 27910472 - 27910409
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||| |||||| |||||||||||||| ||||||||||| ||||||||   ||||||||||    
T  27910472 gttgcctttttaaacc-ttgtttcagcccccgctatctctctctcaaagtttaacctgatacaag 27910409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 38882128 - 38882069
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    |||||||||||||||||||||||||||||||     |||| || | |||||||||||||||||||    
T  38882128 gttgcctttctaaacccttgtttcagccccc-----ctctatctccaagtttgctctgatacaag 38882069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 10474580 - 10474615
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctat 36  Q
    |||||||||||||| |||||||||||||||||||||    
T  10474580 gttgcctttctaaatccttgtttcagccccctctat 10474615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 39
Target Start/End: Original strand, 36402592 - 36402623
Alignment:
Q  8 ttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||||||||||    
T  36402592 ttctaaacccttgtttcagccccctctatctc 36402623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 695911 - 695873
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||| |||||| ||||||    
T  695911 gttgcctttctaaacccttgtttcatccccctttatctc 695873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 4236651 - 4236613
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||| |||||||||||||||| ||||||    
T  4236651 gttgcctttctaaactcttgtttcagccccctttatctc 4236613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 6661594 - 6661636
Alignment:
Q  175 aatattccctttcaaaatatatttgcatcaaatcgtccttcat 217  Q
    |||||||||||||||||||||||| | ||||||| ||||||||    
T  6661594 aatattccctttcaaaatatatttacttcaaatcttccttcat 6661636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 6745091 - 6745049
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    ||||| ||||||||| |||||||||||||||| ||||||||||    
T  6745091 gttgcttttctaaacacttgtttcagccccctttatctctctc 6745049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 6756516 - 6756478
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  6756516 gttgcctttctaaaccattgtttcagctccctctatctc 6756478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 26098508 - 26098546
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||| |||||||||||| |||||||||||||||||||    
T  26098508 gttgccattctaaacccttatttcagccccctctatctc 26098546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 34530923 - 34530961
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  34530923 gttgcatttctaaacacttgtttcagccccctctatctc 34530961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 37706037 - 37706075
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||| || |||||||||||||||||||    
T  37706037 gttgcctttctaaacctttatttcagccccctctatctc 37706075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 39398250 - 39398287
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  39398250 gttgcctttctaaacccttgtttcag-cccctctatctc 39398287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 40221461 - 40221423
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgttt 130  Q
    |||||||||| ||||| ||||||||||||||||||||||    
T  40221461 tcataaatttagaacggatatcacactgaagatacgttt 40221423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 331
Target Start/End: Original strand, 5779168 - 5779217
Alignment:
Q  282 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 331  Q
    ||||||||||||||||||| ||| |||||| || |||||||||| |||||    
T  5779168 tcttttatatttttagcaataatcttcttcatctatcaaattttaagtca 5779217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 10586864 - 10586803
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    |||||| ||||||||||||||||||| |||||||||||||||  ||||||||   ||||||||||    
T  10586864 gttgccattctaaacccttgtttcag-cccctctatctctct--caaagtttagcctgatacaag 10586803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 261
Target Start/End: Complemental strand, 32520316 - 32520241
Alignment:
Q  188 aaaatatatttgcatcaaatcgtccttcatacgatacaaaaatata--tttattgtccataaatatattttcagca 261  Q
    ||||||| ||||||||||||  | |||| |||| ||||||||||||  |||| | | |||||||||||||||||||    
T  32520316 aaaatatgtttgcatcaaatttttcttcgtacggtacaaaaatatatttttactctacataaatatattttcagca 32520241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 187; Significance: 1e-101; HSPs: 86)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 92 - 375
Target Start/End: Original strand, 22132741 - 22133021
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22132741 tcataaatttggaacaaataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 22132837  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  22132838 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 22132937  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatgtc 375  Q
    |||||||||||||||||| | ||||||||||||||| ||||||||||| |||||| |||||||||||||||| |||||||||||    
T  22132938 ttttagcaacaatattctccatccatcaaattttgaatcatactacaacattctccaccttgactccaaatttgtgatgatgtc 22133021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 92 - 375
Target Start/End: Original strand, 14787775 - 14788055
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    |||||||||||||||||||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14787775 tcataaatttggaacgaataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 14787871  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||       ||||||||||    
T  14787872 tatatttgcatcaaatcgttctttatacggtacaaaaatatatttattgtccataaatatattttcaccacaaaatatatttgaaacaaatcttttatat 14787971  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatgtc 375  Q
    ||||||||||| |||||| | ||||||||||||||||||||||||||| |||||| |||||||||| ||||||| |||||||||    
T  14787972 ttttagcaacattattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattagcgatgatgtc 14788055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 92 - 373
Target Start/End: Complemental strand, 5100988 - 5100711
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    |||||||||||||||||||| || | |||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  5100988 tcataaatttggaacgaataccagattgaagatacgttt----tttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 5100893  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||        ||||||||||    
T  5100892 tatatttgcatcaaatcgttcttcatacggtacaaaaatatatttgttgtccataaatatattttcagcacaaaatatatttaaaacaaatcttttatat 5100793  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatg 373  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||| |||||| |||||||||| ||||||| |||||||    
T  5100792 ttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattagcgatgatg 5100711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 92 - 339
Target Start/End: Original strand, 22134972 - 22135217
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||| ||||||||||||||||||         ||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  22134972 tcataaatttggaacaaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgaatcaaaaatataatattccctttcaaaa 22135069  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  22135070 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 22135169  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||    
T  22135170 ttttagcaacaatattctccatccatcaaattttgagtcatactacaa 22135217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 17662491 - 17662824
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaagcaccgaatgcaatg-agatggacatcatcataaat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||  |   ||  |  | | | | | | | ||||||||    
T  17662491 gttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttgctctgatacaaggtctatatttatagtaaaagtataac-tcataaat 17662587  T
Q  100 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 199  Q
    ||||||| |||| |||||||||||||| |||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17662588 ttggaacaaataccacactgaagatactttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 17662684  T
Q  200 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 299  Q
    ||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||        ||||||||||||||||||    
T  17662685 catcaaatcgttcttcgtacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttaaaacaaatcttttatatttttagca 17662784  T
Q  300 acaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||| | ||||||||||||  |||||||||||||    
T  17662785 acaatattctccatccatcaaatttgtagtcatactacaa 17662824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 140 - 339
Target Start/End: Complemental strand, 56030390 - 56030191
Alignment:
Q  140 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 239  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  56030390 ctccttcagtgaaagaatatttgcaccaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttatt 56030291  T
Q  240 gtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  56030290 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 56030191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 140 - 339
Target Start/End: Complemental strand, 24348159 - 24347961
Alignment:
Q  140 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 239  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  24348159 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacaatacaaaaatatatttatt 24348060  T
Q  240 gtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||| ||||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  24348059 gtccataaatatattttc-gcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 24347961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 140 - 339
Target Start/End: Original strand, 44600227 - 44600426
Alignment:
Q  140 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 239  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  44600227 ctccttcagtgaaagaatatttgcatcaaaaatataatattcccttttaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttatt 44600326  T
Q  240 gtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    ||||||||||||||||||||||||| |||| ||||       |||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||    
T  44600327 gtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaatttttgagtcatactacaa 44600426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 94 - 325
Target Start/End: Complemental strand, 30136560 - 30136331
Alignment:
Q  94 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 193  Q
    |||||||| ||||||||||||||||||||||||||||         |||||||| |||||||||||||| || ||||||||||||||| |||| ||||||    
T  30136560 ataaatttagaacgaatatcacactgaagatacgttt--tttttttctccttcaatgaaagaatatttgaatcaaaaatataatattctcttttaaaata 30136463  T
Q  194 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 293  Q
    ||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||| ||||       ||||||||||||    
T  30136462 tatttgcatcaaatcgttcttcatacagtacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatattt 30136363  T
Q  294 ttagcaacaatattcttcttccatcaaatttt 325  Q
    |||||||||||||||| | | |||||||||||    
T  30136362 ttagcaacaatattctccattcatcaaatttt 30136331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 191 - 339
Target Start/End: Original strand, 47211158 - 47211306
Alignment:
Q  191 atatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttata 290  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||       |||||||||    
T  47211158 atatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttgagcacaaaatatatttgaaacaaatcttttata 47211257  T
Q  291 tttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    ||||||||||||||||||| | ||||||||||||| |||||||||||||    
T  47211258 tttttagcaacaatattctccatccatcaaattttaagtcatactacaa 47211306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 100 - 339
Target Start/End: Original strand, 38890478 - 38890699
Alignment:
Q  100 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatatt-ccctttcaaaatatattt 198  Q
    ||||||||||||||||| ||||||||| ||||        |||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  38890478 ttggaacgaatatcacattgaagatacatttcttttttt-ctcctttagtgaaagaatatttgcatcaaaaatataatatttccctttcaaaatatattt 38890576  T
Q  199 gcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagc 298  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |  |||||                |||||||||||||||||    
T  38890577 gcatcaaatcgtccttcatacaatacaaaaatatatttattgtccataaatatatttgaa--acaaa----------------tcttttatatttttagc 38890658  T
Q  299 aacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    ||||||||||| | |||||||||||||||||||| ||||||    
T  38890659 aacaatattctccatccatcaaattttgagtcatgctacaa 38890699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 175 - 339
Target Start/End: Complemental strand, 10112787 - 10112628
Alignment:
Q  175 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttg 274  Q
    ||||||| |||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  10112787 aatattctctttcaaa-tatatttacatcaaatcttccttcatacgatacaaaaatatatttattgtccataaatatagtttcagcacaaaatatatttg 10112689  T
Q  275 nnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
            ||||||||||||||||||||||||||||| | || |||||||| |||||||||||||    
T  10112688 aaac----cttttatatttttagcaacaatattcttcattcaacaaattttaagtcatactacaa 10112628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 92 - 234
Target Start/End: Complemental strand, 19322689 - 19322547
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    |||||||||||||| |||||||||| ||||||||| ||||        |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19322689 tcataaatttggaatgaatatcacattgaagatacatttcttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 19322590  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatat 234  Q
    ||||||||||||||||||||||| ||||  |||||||||||||    
T  19322589 tatatttgcatcaaatcgtcctttatacagtacaaaaatatat 19322547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 175 - 339
Target Start/End: Complemental strand, 9022225 - 9022062
Alignment:
Q  175 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttg 274  Q
    |||||||||||| ||||||||||||||||||||| | ||||||||| || ||||||||||||||||| ||||||||||||||||||| ||||||| ||||    
T  9022225 aatattcccttttaaaatatatttgcatcaaatctttcttcatacggtagaaaaatatatttattgt-cataaatatattttcagcaaaaaatatatttg 9022127  T
Q  275 nnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
           || |||||||||| | ||||||||||  || ||||| ||||||||| |||||||||||    
T  9022126 aaacaaatcatttatattttcaacaacaatatttctcatccataaaattttgaatcatactacaa 9022062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 187 - 339
Target Start/End: Complemental strand, 9863650 - 9863501
Alignment:
Q  187 caaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttt 286  Q
    |||||||||||||||||||||| |||||||| |   ||||||||||||||||||| |||||||||||||| |||||||||||| ||||       || ||    
T  9863650 caaaatatatttgcatcaaatcttccttcatgc---acaaaaatatatttattgttcataaatatatttttagcacaaaatatgtttgaaacaaatcatt 9863554  T
Q  287 tatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    ||||||||||| ||||||||  ||| |||| |||||||||||||||| |||||    
T  9863553 tatatttttagtaacaatatatttcatccaacaaattttgagtcatattacaa 9863501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 175 - 261
Target Start/End: Original strand, 54929094 - 54929180
Alignment:
Q  175 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 261  Q
    ||||||||  || ||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  54929094 aatattcctattaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatattttttgtccataaatatattttcagca 54929180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 92 - 210
Target Start/End: Complemental strand, 53405118 - 53405001
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||| ||||||||| ||||||||         |||||| ||||||||||||||||||| ||||||||||| || ||||||||||    
T  53405118 tcataaatttggaacaaataccacactgaaaatacgttt-ttttttttctcctttagtgaaagaatatttgcatcaaaaatataatttttcctttcaaaa 53405020  T
Q  192 tatatttgcatcaaatcgt 210  Q
    |||||||||||||||||||    
T  53405019 tatatttgcatcaaatcgt 53405001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 182 - 261
Target Start/End: Complemental strand, 10979755 - 10979676
Alignment:
Q  182 cctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 261  Q
    ||||| ||||||||||||||||||||| ||||||||||   |||||||||||||| ||||||||||||||||||||||||    
T  10979755 cctttaaaaatatatttgcatcaaatcttccttcatacagcacaaaaatatatttgttgtccataaatatattttcagca 10979676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 339
Target Start/End: Original strand, 14789512 - 14789569
Alignment:
Q  282 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  14789512 tcttttatatttttagcaacattattcttcatccatcaaattttgagtcatactacaa 14789569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 8631676 - 8631737
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaa 64  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  8631676 gttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttgctttgatacaa 8631737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 38409281 - 38409217
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||| |||||| |||||||||||||||||||||| ||| |||||||||||||||||||||    
T  38409281 gttgcctttttaaaccattgtttcagccccctctatctccctctcaaagtttgctctgatacaag 38409217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 5637722 - 5637784
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||| |||||||    
T  5637722 gttgcctttctaaactcttgtttcagccccctctatctctct--caaagtttgctcttatacaag 5637784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 47210997 - 47211061
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||   ||||||||||    
T  47210997 gttgcctttctaaacccttgtttcagccccctctatctccctctcaaagtttagcctgatacaag 47211061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 9148329 - 9148269
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    |||||||||||||||||||| |||||||||||||||||||    |||||||||||||||||||||    
T  9148329 gttgcctttctaaacccttgcttcagccccctctatctct----caaagtttgctctgatacaag 9148269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 11006494 - 11006541
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaa 48  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11006494 gttgcctttctaaacccttgtttcagccccctctatctctctctcaaa 11006541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 11008823 - 11008870
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaa 48  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11008823 gttgcctttctaaacccttgtttcagccccctctatctctctctcaaa 11008870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 240 - 339
Target Start/End: Complemental strand, 19322510 - 19322410
Alignment:
Q  240 gtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaa-tattcttcttccatcaaattttgagtcatactaca 338  Q
    |||||||||||||||||||| | ||||||| |||        ||||||||||||||||||| || |||||| | ||||||||||||||||||||||||||    
T  19322510 gtccataaatatattttcagtataaaatatatttaaaacaaatcttttatatttttagcaaaaaatattctccatccatcaaattttgagtcatactaca 19322411  T
Q  339 a 339  Q
    |    
T  19322410 a 19322410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 7941397 - 7941338
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaa 64  Q
    ||||||||||||||||||||||||||||||||||||||||| ||    ||||||||||||||||    
T  7941397 gttgcctttctaaacccttgtttcagccccctctatctctcccg----gtttgctctgatacaa 7941338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 18709420 - 18709462
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  18709420 gttgcctttctaaacccttgtttcagccccctctatctctctc 18709462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 24348294 - 24348252
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  24348294 gttgcctttctaaacccttgtttcagccccctctatctctctc 24348252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 331
Target Start/End: Original strand, 38209098 - 38209259
Alignment:
Q  175 aatattccctttcaaa-atatatttgcatcaaatcgtccttcatacgatacaaaaatatatt--tattgtc--cataaatatattttcagcacaaaatat 269  Q
    |||||||| ||||||| |||||||||||||||||| ||||||||||  ||||||||||||||  |||| ||  ||  ||| |  ||  ||||||||||||    
T  38209098 aatattccttttcaaatatatatttgcatcaaatcttccttcatacagtacaaaaatatatttatattttcaacaacaatcttcttgaagcacaaaatat 38209197  T
Q  270 ctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 331  Q
     |||        ||||||||||||||| |||||||||| ||| |||||||||||||||||||    
T  38209198 atttaaaacaaatcttttatatttttaacaacaatatttttcatccatcaaattttgagtca 38209259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 5198496 - 5198438
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||    
T  5198496 gttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaag 5198438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 24888872 - 24888814
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||    
T  24888872 gttgcctttctaaacccttgtttcagccccctctatctct------aagtttgctctgatacaag 24888814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 258
Target Start/End: Original strand, 29609838 - 29609897
Alignment:
Q  199 gcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttca 258  Q
    |||||||||| ||||||||||| |||||||||||||||| | | ||||||||||||||||    
T  29609838 gcatcaaatcttccttcatacggtacaaaaatatatttactcttcataaatatattttca 29609897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 11435031 - 11434993
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  11435031 gttgcctttctaaacccttgtttcagccccctctatctc 11434993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 22044647 - 22044685
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22044647 gttgcctttctaaacccttgtttcagccccctctatctc 22044685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 22046942 - 22046980
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22046942 gttgcctttctaaacccttgtttcagccccctctatctc 22046980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 24446836 - 24446874
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24446836 gttgcctttctaaacccttgtttcagccccctctatctc 24446874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 31849856 - 31849894
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  31849856 gttgcctttctaaacccttgtttcagccccctctatctc 31849894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 37089628 - 37089670
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  37089628 gttgccattctaaacccttgtttcagccccctctatctctctc 37089670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 37313323 - 37313361
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  37313323 gttgcctttctaaacccttgtttcagccccctctatctc 37313361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 40637150 - 40637112
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  40637150 gttgcctttctaaacccttgtttcagccccctctatctc 40637112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 47274803 - 47274765
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  47274803 gttgcctttctaaacccttgtttcagccccctctatctc 47274765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 51015322 - 51015284
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  51015322 gttgcctttctaaacccttgtttcagccccctctatctc 51015284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 2891393 - 2891356
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatct 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2891393 gttgcctttctaaacccttgtttcagccccctctatct 2891356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 6764915 - 6764857
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    |||||||||||||||||||||||||||||| |||||||      |||||||||||||||||||||    
T  6764915 gttgcctttctaaacccttgtttcagccccttctatct------caaagtttgctctgatacaag 6764857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 14787688 - 14787728
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctc 41  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  14787688 gttgccattctaaacccttgtttcagccccctctatctctc 14787728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 16453385 - 16453345
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctc 41  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  16453385 gttgcctttttaaacccttgtttcagccccctctatctctc 16453345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 261
Target Start/End: Original strand, 5516701 - 5516752
Alignment:
Q  210 tccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 261  Q
    |||||||||||||| ||||||||||||||| || ||||||||||||| ||||    
T  5516701 tccttcatacgataaaaaaatatatttattatctataaatatatttttagca 5516752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 36919842 - 36919902
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    |||||||||||||||||||||||||||||||| ||||| |    |||||||| ||||||||||||    
T  36919842 gttgcctttctaaacccttgtttcagccccctatatctat----caaagtttactctgatacaag 36919902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 3937466 - 3937504
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  3937466 gttgcctttctaaacccttgtttcagctccctctatctc 3937504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 9174403 - 9174441
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  9174403 gttgcttttctaaacccttgtttcagccccctctatctc 9174441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 9176731 - 9176769
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  9176731 gttgcttttctaaacccttgtttcagccccctctatctc 9176769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 18847229 - 18847191
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  18847229 gttgcctttctaaacccttgtttcaaccccctctatctc 18847191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 22134872 - 22134913
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  22134872 gttgcctttctaaacccttgtttcag-cccctctatctctctc 22134913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 22780630 - 22780672
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    ||||| ||||||||||| |||||||||||||||||||||||||    
T  22780630 gttgcttttctaaacccctgtttcagccccctctatctctctc 22780672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 22782995 - 22783037
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    ||||| ||||||||||| |||||||||||||||||||||||||    
T  22782995 gttgcttttctaaacccctgtttcagccccctctatctctctc 22783037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 22802991 - 22803029
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  22802991 gttgccattctaaacccttgtttcagccccctctatctc 22803029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 33415748 - 33415782
Alignment:
Q  5 cctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||    
T  33415748 cctttctaaacccttgtttcagccccctctatctc 33415782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 36378368 - 36378330
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  36378368 gttgcctttctaaacccttgtttcagccccgtctatctc 36378330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 38928435 - 38928473
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  38928435 gttgcctttctaaactcttgtttcagccccctctatctc 38928473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 40091672 - 40091710
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  40091672 gttgtctttctaaacccttgtttcagccccctctatctc 40091710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 44600095 - 44600133
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  44600095 gttgcttttctaaacccttgtttcagccccctctatctc 44600133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 166
Target Start/End: Original strand, 47211088 - 47211160
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcata 166  Q
    ||||||||||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||||    
T  47211088 tcataaatttggaacaaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcata 47211160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 48486395 - 48486357
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  48486395 gttgccattctaaacccttgtttcagccccctctatctc 48486357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 53405206 - 53405145
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    |||||||||||||||||||||||||| |||||||||||||||  ||||||||   ||||||||||    
T  53405206 gttgcctttctaaacccttgtttcag-cccctctatctctct--caaagtttagcctgatacaag 53405145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 222 - 261
Target Start/End: Original strand, 14647175 - 14647214
Alignment:
Q  222 tacaaaaatatatttattgtccataaatatattttcagca 261  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  14647175 tacaaaaatatatttgttgtccatgaatatattttcagca 14647214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 39
Target Start/End: Complemental strand, 19095951 - 19095920
Alignment:
Q  8 ttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||||||||||    
T  19095951 ttctaaacccttgtttcagccccctctatctc 19095920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 39
Target Start/End: Original strand, 22801126 - 22801157
Alignment:
Q  8 ttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||||||||||    
T  22801126 ttctaaacccttgtttcagccccctctatctc 22801157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 292 - 327
Target Start/End: Original strand, 29609948 - 29609983
Alignment:
Q  292 ttttagcaacaatattcttcttccatcaaattttga 327  Q
    |||||||||||||||||||| |||||||||||||||    
T  29609948 ttttagcaacaatattcttcatccatcaaattttga 29609983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 36921751 - 36921810
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||| ||||||||||| ||||||||||||||    |||||||| ||||||||||||    
T  36921751 gttgcctttctaagcccttgtttca-ccccctctatctct----caaagtttactctgatacaag 36921810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 619704 - 619742
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||| |||| |||||||||||||||||||||||||||||    
T  619704 gttgtctttataaacccttgtttcagccccctctatctc 619742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 12396102 - 12396140
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  12396102 gttgcctttctaaatccttgtttcagccccatctatctc 12396140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 12401064 - 12401102
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  12401064 gttgcctttctaaatccttgtttcagccccatctatctc 12401102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 16932046 - 16932084
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  16932046 gttgcttttctaaacccttgtatcagccccctctatctc 16932084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 16934400 - 16934438
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  16934400 gttgcttttctaaacccttgtatcagccccctctatctc 16934438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 18709513 - 18709551
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgttt 130  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  18709513 tcataaatttggaacaaataccacactgaagatacgttt 18709551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 24879065 - 24879027
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||| ||||||||||||| ||||||||||||||||||||    
T  24879065 gttgtctttctaaaccctagtttcagccccctctatctc 24879027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 38270243 - 38270281
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||| | ||||||||    
T  38270243 gttgcctttctaaacccttgtttcagcctcttctatctc 38270281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 47868477 - 47868439
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  47868477 gttgcctttctaaacccttctttcagccctctctatctc 47868439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 52942703 - 52942740
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  52942703 gttgcctttctaaacccttgtttcag-cccctctatctc 52942740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 331
Target Start/End: Original strand, 54929220 - 54929267
Alignment:
Q  282 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 331  Q
    |||||||||||||||||||||||||| |  |||||||||||||| |||||    
T  54929220 tcttttatatttttagcaacaatattat--ttccatcaaattttaagtca 54929267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 16455074 - 16455017
Alignment:
Q  317 tcaaattttgagtca-tactacaaaattctcaaccttgactccaaattagtgatgatg 373  Q
    |||||| |||||||| | |||||| | |||| ||||||||||||||||||||||||||    
T  16455074 tcaaatattgagtcacttctacaacaatctccaccttgactccaaattagtgatgatg 16455017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 16455356 - 16455323
Alignment:
Q  8 ttctaaacccttgtttcagccccctctatctctc 41  Q
    ||||||||||||||||||||||||| ||||||||    
T  16455356 ttctaaacccttgtttcagccccctttatctctc 16455323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 22132647 - 22132676
Alignment:
Q  1 gttgcctttctaaacccttgtttcagcccc 30  Q
    ||||||||||||||||||||||||||||||    
T  22132647 gttgcctttctaaacccttgtttcagcccc 22132676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 325
Target Start/End: Original strand, 5516793 - 5516833
Alignment:
Q  285 tttatatttttagcaacaatattcttcttccatcaaatttt 325  Q
    ||||||||||||||||||||||||| | | |||||||||||    
T  5516793 tttatatttttagcaacaatattctccattcatcaaatttt 5516833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 88)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 92 - 373
Target Start/End: Complemental strand, 20299401 - 20299123
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    |||||||| |||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20299401 tcataaatatggaacaaataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 20299305  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  20299304 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaataaatcttttatat 20299205  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatg 373  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  20299204 ttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattagtgatgatg 20299123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 92 - 373
Target Start/End: Original strand, 7092521 - 7092800
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    |||||||||||||||||||| ||||||||||||||  ||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7092521 tcataaatttggaacgaataccacactgaagatacaatt--ttttttcctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 7092618  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||       ||||||||||    
T  7092619 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatcttcagcacaaaatatatttgaaacaaatcttttatat 7092718  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatg 373  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  7092719 ttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattagtgatgatg 7092800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 92 - 373
Target Start/End: Complemental strand, 28487496 - 28487217
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    |||||||||| |||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  28487496 tcataaatttagaacaaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 28487399  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  28487398 tatatttgcatcaaatcattcttcatacgatacaaaattatatttattgtccataaatatattttcagcacaaaatatatttgaagcaaatcttttatat 28487299  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatg 373  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  28487298 ttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattagtgatgatg 28487217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 92 - 373
Target Start/End: Original strand, 31156253 - 31156532
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||| |||||||||||| |||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  31156253 tcataaatttggaacaaataccacactgaagattcgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 31156350  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||       ||||||||||    
T  31156351 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatat 31156450  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatg 373  Q
    |||||||||||||||||| | |||||||| |||||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  31156451 ttttagcaacaatattctccatccatcaatttttgagtcatactacaacattctccaccttgactctaaattagtgatgatg 31156532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 92 - 373
Target Start/End: Complemental strand, 38396233 - 38395954
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||| ||||| ||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  38396233 tcataaatttggaacaaataccacaccgaagatacgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 38396136  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||       ||||||||||    
T  38396135 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtacataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 38396036  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatg 373  Q
    |||||||||||||||||| | |||||||||||| |||||||||||||| |||||| |||||||||| |||||||||||||||    
T  38396035 ttttagcaacaatattctccatccatcaaatttggagtcatactacaacattctccaccttgactctaaattagtgatgatg 38395954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 7094679 - 7095013
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaagcaccgaatgcaatgagatggacatca-tcataaat 99  Q
    |||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||  |   ||  | | | |   | || | ||||||||    
T  7094679 gttgccattctaaacccttgtttcagccccctctatctctctc--aaagtttgctctgatacaaggtctatattta-taataaacatataactcataaat 7094775  T
Q  100 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 199  Q
    |||||||||||| ||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7094776 ttggaacgaataccacactgaagatacgttt--ttttttcctccttcagtgaaagaatatttgcataaaaaatataatatttcctttcaaaatatatttg 7094873  T
Q  200 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 299  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  7094874 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 7094973  T
Q  300 acaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  7094974 acaatattctccatccatcaaattttgagtcatactacaa 7095013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 92 - 339
Target Start/End: Complemental strand, 1849912 - 1849667
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||| |||||||||||| |||||         |||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  1849912 tcataaatttggaacaaataccacactgaagattcgttt--tttttttctccttcagtgaaagaatatctgcatcaaaaatataatattccctttcaaaa 1849815  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  1849814 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 1849715  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1849714 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 1849667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 92 - 373
Target Start/End: Original strand, 7349621 - 7349899
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||||||||||||||||||||||         ||| |||||||||||||||||||| | ||||||||||||||| |||||||||    
T  7349621 tcataaatttggaacaaatatcacactgaagatacgttt---ttttttctcattcagtgaaagaatatttgcctcaaaaatataatattctctttcaaaa 7349717  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||       ||||||||||    
T  7349718 tatatttgcatcaaatcgttcttcatgcgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatat 7349817  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatg 373  Q
    |||||||||||||||||| | |||||||| |||||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  7349818 ttttagcaacaatattctccatccatcaatttttgagtcatactacaacattctccaccttgactctaaattagtgatgatg 7349899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 92 - 373
Target Start/End: Original strand, 7470368 - 7470653
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnn----ctccttcagtgaaagaatatttgcataaaaaatataatattccctttc 187  Q
    |||||||||||||||||||| ||||||||||||||||||             |||||||| ||||||||||||||||| |||||||||||||||||||||    
T  7470368 tcataaatttggaacgaataccacactgaagatacgtttttttttttcttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttc 7470467  T
Q  188 aaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntctttt 287  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       | ||||    
T  7470468 aaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatgtttt 7470567  T
Q  288 atatttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatg 373  Q
    ||||||||||||| |||||||| | ||||||||||||||||||||||||||| |||||| |||||||||| ||||| |||||||||    
T  7470568 atatttttagcaataatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaatttgtgatgatg 7470653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 92 - 339
Target Start/End: Complemental strand, 1606417 - 1606173
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||| |||||||||||| |||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1606417 tcataaatttggaacaaataccacactgaagattcgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 1606321  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||       ||||||||||    
T  1606320 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatat 1606221  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1606220 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 1606173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 92 - 339
Target Start/End: Complemental strand, 3035664 - 3035417
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||| || |||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3035664 tcataaatttggaacaaataccatactgaagatacgttttttttctttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 3035565  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  3035564 tatatttgcatcaaatcattcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 3035465  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||    
T  3035464 ttttagcaacaatattctccatccatcaaattttgagtcatactacaa 3035417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 92 - 339
Target Start/End: Complemental strand, 11757171 - 11756927
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11757171 tcataaatttggaacaaataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 11757075  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  11757074 tatatttgcatcaaatagttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 11756975  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||    
T  11756974 ttttagcaacaatattctccatccatcaaattttgagtcatactacaa 11756927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 92 - 336
Target Start/End: Complemental strand, 20625981 - 20625739
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    |||||||||||||||||||| ||||||||||||||||||         |||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  20625981 tcataaatttggaacgaataccacactgaagatacgttt--ttttttgctccttcagtgaaaaaatatttgcatcaaaaatataatattccctttcaaaa 20625884  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  20625883 tatatttgtatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 20625784  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatacta 336  Q
    |||||||||||||||||| | ||||||||||||||||||||||||    
T  20625783 ttttagcaacaatattctccatccatcaaattttgagtcatacta 20625739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 92 - 336
Target Start/End: Complemental strand, 20629872 - 20629630
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    |||||||||||||||||||| ||||||||||||||||||         |||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  20629872 tcataaatttggaacgaataccacactgaagatacgttt--ttttttgctccttcagtgaaaaaatatttgcatcaaaaatataatattccctttcaaaa 20629775  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  20629774 tatatttgtatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 20629675  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatacta 336  Q
    |||||||||||||||||| | ||||||||||||||||||||||||    
T  20629674 ttttagcaacaatattctccatccatcaaattttgagtcatacta 20629630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 92 - 336
Target Start/End: Complemental strand, 20642291 - 20642049
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    |||||||||||||||||||| ||||||||||||||||||         |||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  20642291 tcataaatttggaacgaataccacactgaagatacgttt--ttttttgctccttcagtgaaaaaatatttgcatcaaaaatataatattccctttcaaaa 20642194  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  20642193 tatatttgtatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 20642094  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatacta 336  Q
    |||||||||||||||||| | ||||||||||||||||||||||||    
T  20642093 ttttagcaacaatattctccatccatcaaattttgagtcatacta 20642049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 92 - 339
Target Start/End: Original strand, 7472326 - 7472572
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||| ||||||||||||||||||         |||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  7472326 tcataaatttggaacaaataccacactgaagatacgttt-ttttttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaa 7472424  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  7472425 tatatttgcatcaaatcgttcttcatatgatacaataatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 7472524  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||    
T  7472525 ttttagcaacaatattctccatccatcaaattttgagtcatactacaa 7472572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 92 - 339
Target Start/End: Complemental strand, 28485509 - 28485263
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||| |||||||||||||||| |         ||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  28485509 tcataaatttggaacaaataccacactgaagatacgtgt-tttttttcctccttcggtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 28485411  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       | ||||||||    
T  28485410 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatattttatat 28485311  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||    
T  28485310 ttttagcaacaatattcttcatccatcaaattttgaatcatactacaa 28485263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 141 - 339
Target Start/End: Complemental strand, 47865528 - 47865330
Alignment:
Q  141 tccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattg 240  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  47865528 tccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattg 47865429  T
Q  241 tccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    ||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||    
T  47865428 tccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttggagtcatactacaa 47865330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 92 - 339
Target Start/End: Original strand, 7352000 - 7352244
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||||||||||||||||||||||         ||| |||||||||||||||||||| | |||||||||||||||||||||||||    
T  7352000 tcataaatttggaacaaatatcacactgaagatacgttt---ttttttctcattcagtgaaagaatatttgcctcaaaaatataatattccctttcaaaa 7352096  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||       ||||||||||    
T  7352097 tatatttgcatcaaatcgttcttcatgcgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatat 7352196  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||| | |||||||| ||||||||||||||||||    
T  7352197 ttttagcaacaatattctccatccatcaatttttgagtcatactacaa 7352244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 92 - 339
Target Start/End: Complemental strand, 18345484 - 18345239
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  18345484 tcataaatttggaacaaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccatttcaaaa 18345387  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||| ||||       ||||||||||    
T  18345386 tatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtcaataaatatatttttagcacaaaatatatttgaaacaaatcttttatat 18345287  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||    
T  18345286 ttttagcaacaatattctccatccatcaaattttgagtcatactacaa 18345239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 92 - 339
Target Start/End: Original strand, 37412470 - 37412714
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    |||||||||||||||||||| ||||||||||||||||||         ||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  37412470 tcataaatttggaacgaataacacactgaagatacgttt---ttttttctccttcagtggaagaatatttgcatcaaaaatataatattccctttcaaaa 37412566  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||| | ||||||||| |||| || |||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  37412567 tatatttgcatcaaatcattcttcatacgttacataattatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 37412666  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||    
T  37412667 ttttagcaacaatattctccatccatcaaattttgagtcatactacaa 37412714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 92 - 339
Target Start/End: Original strand, 21470637 - 21470881
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||| ||||| ||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  21470637 tcataaatttggaacaaataccacaccgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 21470733  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  21470734 tatattcgcatcaaatcgttcttcatacgatataaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 21470833  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||| | |||||||||||| |||||| |||||||    
T  21470834 ttttagcaacaatattctccatccatcaaatttggagtcaaactacaa 21470881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 140 - 333
Target Start/End: Complemental strand, 24258358 - 24258166
Alignment:
Q  140 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 239  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||    
T  24258358 ctccttcagtgaaagaatatttacatcaaaaatataatattccctttcaaaatatatttgcatcaa-tcgtccttcatactgtacaaaaatatatttatt 24258260  T
Q  240 gtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcata 333  Q
    |||||||||||||||||||||||||||||| ||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24258259 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcata 24258166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 92 - 339
Target Start/End: Complemental strand, 21990098 - 21989855
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    |||||||||||||||||||| ||||| ||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  21990098 tcataaatttggaacgaataccacacagaagatacgttt--ttttttcctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 21990001  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||  ||| ||||| ||||       ||||||||||    
T  21990000 tatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttca--acacaatatatttgaaacaaatcttttatat 21989903  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||| | |||||||||||||| ||||||||||||    
T  21989902 ttttagcaacaatattctccatccatcaaattttgggtcatactacaa 21989855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 92 - 339
Target Start/End: Complemental strand, 38393929 - 38393685
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||| |||||||||||||||||          | |||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  38393929 tcataaatttggaacaaataccacactgaagatacgtt---attttttcaccttcagtgaaagaatatttgcatcaaaaatataacattccctttcaaaa 38393833  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||       |||| |||||    
T  38393832 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaataaattttcagcacaaaatatatttgaaacaaatcttatatat 38393733  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||| | |||||||||||| || |||||||||||    
T  38393732 ttttagcaacaatattctccatccatcaaatttagaatcatactacaa 38393685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 92 - 339
Target Start/End: Original strand, 42331341 - 42331591
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnn---ctccttcagtgaaagaatatttgcataaaaaatataatattccctttca 188  Q
    |||||||||||||||||||| |||||| |||||||||||            |||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  42331341 tcataaatttggaacgaataccacactaaagatacgtttttttttttctttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttca 42331440  T
Q  189 aaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntctttta 288  Q
    |||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||        |||||||    
T  42331441 aaatatatttgcatcaaatcgttcttcatacggtacaaaaatatacttattgtccataaatatattttcagcacaaaatatatttaaaacaaatctttta 42331540  T
Q  289 tatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||||||    
T  42331541 tatttttagcaacaatattcttcattcatcaaattttaagtcatactacaa 42331591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 92 - 269
Target Start/End: Original strand, 13099818 - 13099993
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    |||||||||||||||||||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  13099818 tcataaatttggaacgaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 13099915  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatat 269  Q
    |||||||| |||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  13099916 tatatttgtatcaaatcgttcttcatacggtacgaaaatatatttattgtccataaatatattttcagcacaaaatat 13099993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 140 - 261
Target Start/End: Original strand, 43253914 - 43254035
Alignment:
Q  140 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 239  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  43253914 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttatt 43254013  T
Q  240 gtccataaatatattttcagca 261  Q
    ||||||||||||||||| ||||    
T  43254014 gtccataaatatatttttagca 43254035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 92 - 339
Target Start/End: Complemental strand, 3677227 - 3676999
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    |||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3677227 tcataaatttggaacgaatatcacactgaagatacgttttttttttctctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 3677128  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| ||||||||| |||||||||||                   |||||||||||||||||| ||||       ||||||||||    
T  3677127 tatatttgcatcaaatcgttcttcatacggtacaaaaatat-------------------attttcagcacaaaatatatttgaaacaaatcttttatat 3677047  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||| | || ||||||||||||||||||||||||    
T  3677046 ttttagcaacaatattctccatctatcaaattttgagtcatactacaa 3676999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 193 - 339
Target Start/End: Complemental strand, 443474 - 443328
Alignment:
Q  193 atatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatt 292  Q
    ||||||||||||||| || ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||||    
T  443474 atatttgcatcaaattgttcttcagacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatt 443375  T
Q  293 tttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||    
T  443374 tttagcaacaatattctccatccatcaaattttgagtcatactacaa 443328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 95 - 237
Target Start/End: Complemental strand, 20297302 - 20297163
Alignment:
Q  95 taaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatat 194  Q
    |||||||||||| |||| ||||||||||||||||||         ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  20297302 taaatttggaacaaataccacactgaagatacgttt---ttttttctccttcggtgaaagaatatttgcatcaaaaatataatattccctttcaaaatat 20297206  T
Q  195 atttgcatcaaatcgtccttcatacgatacaaaaatatattta 237  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  20297205 atttgcatcaaatcgttcttcatacgatacaaaaatatattta 20297163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 175 - 338
Target Start/End: Original strand, 40281824 - 40281989
Alignment:
Q  175 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttg 274  Q
    |||||||| ||| |||||||||  | |||||||  || |||||||| |||||||||||||||||| |||||||||||||||||| |||||||||| ||||    
T  40281824 aatattccttttaaaaatatatccgtatcaaatattctttcatacggtacaaaaatatatttattttccataaatatattttcaacacaaaatatatttg 40281923  T
Q  275 nnnnnnntcttttatatttttagcaacaa--tattcttcttccatcaaattttgagtcatactaca 338  Q
           | ||||||||||||||||||||  | |||||| ||||||||||||||||||||||||||    
T  40281924 aaacaaatattttatatttttagcaacaaattcttcttcatccatcaaattttgagtcatactaca 40281989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 7351909 - 7351973
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||    
T  7351909 gttgcctttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaag 7351973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 175 - 261
Target Start/End: Original strand, 12310442 - 12310528
Alignment:
Q  175 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 261  Q
    |||||||| ||| ||||||||||| ||||||||| ||||||||||| |||||||||||||| | ||||| ||| |||| ||||||||    
T  12310442 aatattccttttaaaaatatatttacatcaaatcttccttcatacggtacaaaaatatattaactgtccttaagtataatttcagca 12310528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 7470279 - 7470341
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||  |||||||||||    
T  7470279 gttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttagtctgatacaag 7470341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 7349530 - 7349594
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||   ||||||||||    
T  7349530 gttgcctttctaaacccctgtttcagccccctctatctctctctcaaagtttagcctgatacaag 7349594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 3878609 - 3878549
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    |||| |||||||||||||||||||||||||||||||||||    |||||||||||||||||||||    
T  3878609 gttgtctttctaaacccttgtttcagccccctctatctct----caaagtttgctctgatacaag 3878549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1850013 - 1849971
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  1850013 gttgcctttctaaacccttgtttcagccccctctatctctctc 1849971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 7092439 - 7092494
Alignment:
Q  8 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    |||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||    
T  7092439 ttctaaacccttgtttcagccccctccatctctct--caaagtttgctctgatacaag 7092494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 48457685 - 48457643
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  48457685 gttgcctttctaaacccttgtttcagccccctctatctctctc 48457643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 44596 - 44538
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||    
T  44596 gttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaag 44538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 3035753 - 3035691
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||   ||||||||||    
T  3035753 gttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttagcctgatacaag 3035691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 7472237 - 7472299
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||| ||||||||||||||||||||||||||||||||||||  ||||||||  |||||||||||    
T  7472237 gttgcttttctaaacccttgtttcagccccctctatctctct--caaagtttagtctgatacaag 7472299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 331
Target Start/End: Complemental strand, 20297157 - 20297108
Alignment:
Q  282 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 331  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||    
T  20297157 tcttttatatttttagcaacaatattctccatccatcaaattttgagtca 20297108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 20626070 - 20626008
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||  ||||||| |||    
T  20626070 gttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttagtctgatagaag 20626008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 20629961 - 20629899
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||  ||||||| |||    
T  20629961 gttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttagtctgatagaag 20629899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 20642380 - 20642318
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||  ||||||| |||    
T  20642380 gttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttagtctgatagaag 20642318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 38394018 - 38393956
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||   ||||||||||    
T  38394018 gttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttagcctgatacaag 38393956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 1049552 - 1049590
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1049552 gttgcctttctaaacccttgtttcagccccctctatctc 1049590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 11355290 - 11355252
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  11355290 gttgcctttctaaacccttgtttcagccccctctatctc 11355252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 20137366 - 20137404
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20137366 gttgcctttctaaacccttgtttcagccccctctatctc 20137404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 21678098 - 21678060
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  21678098 gttgcctttctaaacccttgtttcagccccctctatctc 21678060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 21680059 - 21680021
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  21680059 gttgcctttctaaacccttgtttcagccccctctatctc 21680021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 24258495 - 24258457
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24258495 gttgcctttctaaacccttgtttcagccccctctatctc 24258457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 26804601 - 26804563
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26804601 gttgcctttctaaacccttgtttcagccccctctatctc 26804563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 27306486 - 27306524
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27306486 gttgcctttctaaacccttgtttcagccccctctatctc 27306524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 28487581 - 28487543
Alignment:
Q  5 cctttctaaacccttgtttcagccccctctatctctctc 43  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28487581 cctttctaaacccttgtttcagccccctctatctctctc 28487543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 31156168 - 31156206
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  31156168 gttgcctttctaaacccttgtttcagccccctctatctc 31156206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 20297394 - 20297332
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    |||||| |||||||||||||||||||||||||||||||||||  ||||||||   ||||||||||    
T  20297394 gttgccattctaaacccttgtttcagccccctctatctctct--caaagtttagcctgatacaag 20297332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 40946360 - 40946298
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    |||||||||||||||||||||||||||||||||| || ||||  ||||||||||| ||| |||||    
T  40946360 gttgcctttctaaacccttgtttcagccccctctgtccctct--caaagtttgctatgaaacaag 40946298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 283 - 331
Target Start/End: Complemental strand, 10690732 - 10690684
Alignment:
Q  283 cttttatatttttagcaacaatattcttcttccatcaaattttgagtca 331  Q
    |||||||||||||||||||||| |||| | |||||||||||||||||||    
T  10690732 cttttatatttttagcaacaatcttctccctccatcaaattttgagtca 10690684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 12484976 - 12485023
Alignment:
Q  214 tcatacgatacaaaaatatatttattgtccataaatatattttcagca 261  Q
    |||||||||||||||||||||||  | |||||||||||||||||||||    
T  12484976 tcatacgatacaaaaatatatttgctatccataaatatattttcagca 12485023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 12506407 - 12506454
Alignment:
Q  214 tcatacgatacaaaaatatatttattgtccataaatatattttcagca 261  Q
    |||||||||||||||||||||||  | |||||||||||||||||||||    
T  12506407 tcatacgatacaaaaatatatttgctatccataaatatattttcagca 12506454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 1047181 - 1047223
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    ||||| ||||||||||| |||||||||||||||||||||||||    
T  1047181 gttgcttttctaaacccctgtttcagccccctctatctctctc 1047223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 9680851 - 9680809
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    |||||| |||||||||||||||||| |||||||||||||||||    
T  9680851 gttgcccttctaaacccttgtttcaaccccctctatctctctc 9680809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 18345573 - 18345535
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  18345573 gttgcctttctaaacccttgtttcaaccccctctatctc 18345535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 18567645 - 18567607
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  18567645 gttgcctttctaaacccttgtttcagccccttctatctc 18567607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 22828890 - 22828928
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  22828890 gttgcctttctaaactcttgtttcagccccctctatctc 22828928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 31435304 - 31435342
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  31435304 gttgcctttctaaacccttgtttcagccccttctatctc 31435342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 38396348 - 38396306
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    |||||||||||||||||||||||||||||||||  ||||||||    
T  38396348 gttgcctttctaaacccttgtttcagccccctccctctctctc 38396306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 333
Target Start/End: Original strand, 43254023 - 43254069
Alignment:
Q  287 tatatttttagcaacaatattcttcttccatcaaattttgagtcata 333  Q
    ||||||||||||||||||||||| | |||||||||||||||| ||||    
T  43254023 tatatttttagcaacaatattctccatccatcaaattttgagacata 43254069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 44724611 - 44724573
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  44724611 gttgcctttctaaacccttgtttcagccccctatatctc 44724573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 35661 - 35603
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    |||| |||||| ||||||||||||||||||||||||||      |||||||||||||||||||||    
T  35661 gttgtctttctgaacccttgtttcagccccctctatct------caaagtttgctctgatacaag 35603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 166 - 247
Target Start/End: Complemental strand, 10690854 - 10690773
Alignment:
Q  166 aaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataa 247  Q
    |||| ||| |||||||| ||| ||||||||||||||||||||  ||  ||| | | |||||||||||||||||||| |||||    
T  10690854 aaaatataaaatattccttttaaaaatatatttgcatcaaatattctgtcacatggtacaaaaatatatttattgtacataa 10690773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 28485598 - 28485536
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||||||| |||| |||||||||||  ||||||||   ||||||||||    
T  28485598 gttgcctttctaaacccttgtttcaaccccttctatctctct--caaagtttagcctgatacaag 28485536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 24465575 - 24465543
Alignment:
Q  7 tttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||    
T  24465575 tttctaaacccttgtttcagccccctctatctc 24465543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 39
Target Start/End: Original strand, 4296199 - 4296230
Alignment:
Q  8 ttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||||||||||    
T  4296199 ttctaaacccttgtttcagccccctctatctc 4296230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 39
Target Start/End: Complemental strand, 7188568 - 7188537
Alignment:
Q  8 ttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||||||||||    
T  7188568 ttctaaacccttgtttcagccccctctatctc 7188537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 12657600 - 12657647
Alignment:
Q  214 tcatacgatacaaaaatatatttattgtccataaatatattttcagca 261  Q
    |||||||||||||||||||||||  | ||||| |||||||||||||||    
T  12657600 tcatacgatacaaaaatatatttgctatccatgaatatattttcagca 12657647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 39
Target Start/End: Original strand, 42331263 - 42331294
Alignment:
Q  8 ttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||||||||||    
T  42331263 ttctaaacccttgtttcagccccctctatctc 42331294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 443542 - 443504
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgttt 130  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  443542 tcataaatttggaacgaattccacactgaagatacgttt 443504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 13099733 - 13099771
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  13099733 gttgccattctaaacccttgtttcaaccccctctatctc 13099771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 21592400 - 21592438
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||| |||||||||| ||||||||||||||||||||||    
T  21592400 gttgcatttctaaacctttgtttcagccccctctatctc 21592438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 22251799 - 22251837
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  22251799 gttgcctttctaaactcttgtttcagcctcctctatctc 22251837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 24748626 - 24748592
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctcta 35  Q
    |||| ||||||||||||||||||||||||||||||    
T  24748626 gttgtctttctaaacccttgtttcagccccctcta 24748592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 37412385 - 37412423
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||| ||||||||||||||||||||||||| ||||||    
T  37412385 gttgccattctaaacccttgtttcagccccctatatctc 37412423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 40836999 - 40837037
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  40836999 gttgcctttctaaacccttctttcagccccctcaatctc 40837037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 39
Target Start/End: Complemental strand, 22392495 - 22392467
Alignment:
Q  11 taaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||    
T  22392495 taaacccttgtttcagccccctctatctc 22392467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 177; Significance: 3e-95; HSPs: 2)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 94 - 339
Target Start/End: Complemental strand, 1980 - 1737
Alignment:
Q  94 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 193  Q
    |||||||||||||||||| ||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1980 ataaatttggaacgaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 1883  T
Q  194 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 293  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||    
T  1882 tatttgcatcaaatcttccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattt 1783  T
Q  294 ttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  1782 ttagcaacaatattcttcttccttcaaattttgagtcatactacaa 1737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 2073 - 2009
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    |||||||||||||||||||||||||||||||| ||||| |||| ||||||||||| ||| |||||    
T  2073 gttgcctttctaaacccttgtttcagccccctatatctttctctcaaagtttgctatgaaacaag 2009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 177; Significance: 3e-95; HSPs: 86)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 92 - 373
Target Start/End: Complemental strand, 458197 - 457918
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  458197 tcataaatttggaacaaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 458100  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||       ||||||||||    
T  458099 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccacaaatatattttcagcacaaaatatatttgaaacaaatcttttatat 458000  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatg 373  Q
    |||||||||||||||||  | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||| ||||||    
T  457999 ttttagcaacaatattccccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattagtaatgatg 457918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 92 - 375
Target Start/End: Complemental strand, 42992199 - 42991919
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||  ||||| |||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  42992199 tcataaatttggaattaatattacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 42992103  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||        |||||||||    
T  42992102 tatatttgcatcaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaaccttttatat 42992003  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatgtc 375  Q
    ||||| |||||||||||| | ||||||||||||||||||||||||||| |||||  |||||||||| |||||||||||||||||    
T  42992002 ttttaacaacaatattctccatccatcaaattttgagtcatactacaacattcttcaccttgactctaaattagtgatgatgtc 42991919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 92 - 375
Target Start/End: Original strand, 53915836 - 53916116
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    |||||||||||||||||||| |||||| |||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  53915836 tcataaatttggaacgaataccacactcaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 53915932  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  53915933 tatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 53916032  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatgtc 375  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||| |||||   ||||||||| ||||||||||| |||||    
T  53916033 ttttagcaacaatattctccatccctcaaattttgagtcatactacaacattcttcgccttgactctaaattagtgataatgtc 53916116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 746759 - 746424
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaagcaccgaatgca-atgagatggacatcatcataaat 99  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||  |   ||  | |  | | | | | | ||||||||    
T  746759 gttgcttttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataac-tcataaat 746661  T
Q  100 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 199  Q
    ||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  746660 ttggaacaaataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 746564  T
Q  200 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 299  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  746563 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 746464  T
Q  300 acaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  746463 acaatattctccatccatcaaattttgagtcatactacaa 746424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 140 - 339
Target Start/End: Original strand, 4104282 - 4104481
Alignment:
Q  140 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4104282 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 4104381  T
Q  240 gtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||||||| ||| ||| ||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4104382 gtccataaatatattttcagcataaagtatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 4104481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 92 - 339
Target Start/End: Complemental strand, 25533351 - 25533109
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    |||||||||| |||| |||||||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25533351 tcataaatttagaacaaatatcacactgaagatacgttt-----ttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 25533257  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       ||||||||||    
T  25533256 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcaaaaaatatatttgaaacaaatcttttatat 25533157  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||    
T  25533156 ttttagcaacaatattctccatccatcaaattttgagtcatactacaa 25533109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 91 - 339
Target Start/End: Complemental strand, 51943289 - 51943044
Alignment:
Q  91 atcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaa 190  Q
    ||||||||||||||||||||| ||||||||||||||||||         |||||||| ||||||||||||| ||| ||||||||||||||||||||||||    
T  51943289 atcataaatttggaacgaataccacactgaagatacgttt---ttctttctccttcaatgaaagaatatttacatcaaaaatataatattccctttcaaa 51943193  T
Q  191 atatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttata 290  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||    
T  51943192 atatatttgcatcaaatcattcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttata 51943093  T
Q  291 tttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  51943092 tttttagcaacaatattcttcatccatcaaattttgagtcatactacaa 51943044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 92 - 339
Target Start/End: Original strand, 10621882 - 10622125
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10621882 tcataaatttggaacaaataccacactgaagatacgttt----tttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 10621977  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||       ||||||||||    
T  10621978 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatcttcagcacaatatatatttgaaacaaatcttttatat 10622077  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||    
T  10622078 ttttagcaacaatattctccatccatcaaattttgagtcatactacaa 10622125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 92 - 339
Target Start/End: Complemental strand, 455820 - 455575
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||| | ||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  455820 tcataaatttggaacaaataccgcactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 455723  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||       ||||||||||    
T  455722 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccacaaatatattttcagcacaaaatatatttgaaacaaatcttttatat 455623  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||  | |||||||||||||||||||||||||||    
T  455622 ttttagcaacaatattccccatccatcaaattttgagtcatactacaa 455575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 92 - 339
Target Start/End: Complemental strand, 1313327 - 1313084
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||||||||||||||| ||||||| |||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1313327 tcataaatttggaacgaatatcacactaaagatactttt----tttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 1313232  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||| ||||       || |||||||    
T  1313231 tatatttgcatcaaatcgttcttcatacggtacagaaatatatttattgtccataaatatattttcaacacaaaatatatttgaaacaaatcatttatat 1313132  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||    
T  1313131 ttttagcaacaatattctccatccatcaaattttgagtcatactacaa 1313084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 92 - 339
Target Start/End: Original strand, 27635968 - 27636210
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    |||||||||||||||||||| |||||||||||||| |||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27635968 tcataaatttggaacgaataccacactgaagatacattt-----ttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 27636062  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||       | ||||||||    
T  27636063 tatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaactaatattttatat 27636162  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||| | ||||||||||||| | |||||||||||    
T  27636163 ttttagcaacaatattctccatccatcaaattttaaatcatactacaa 27636210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 144 - 339
Target Start/End: Complemental strand, 41849001 - 41848806
Alignment:
Q  144 ttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtcc 243  Q
    |||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41849001 ttcagttaaagaatatttgcatcaaaaatataatattccttttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtcc 41848902  T
Q  244 ataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  41848901 ataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 41848806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 92 - 339
Target Start/End: Complemental strand, 42990199 - 42989954
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||| |||||||||||||| |||         |||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  42990199 tcataaatttggaacaaataccacactgaagatacattt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaa 42990102  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||       | ||||||||    
T  42990101 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatactttcagcaaaaaatatatttgaaacaaattttttatat 42990002  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||    
T  42990001 ttttagcaacaatattctccatccatcaaattttgagtcatactacaa 42989954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 92 - 336
Target Start/End: Original strand, 53918004 - 53918245
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||| |||||||| ||||||||||||||||||         |||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  53918004 tcataaatttgaaacgaataccacactgaagatacgttt---ttttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaa 53918100  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||| |||| |||||||||| ||||       ||||||||||    
T  53918101 tatatttgcatcaaatcgttcttcatacggtaaaaaaatatatttattgtccataaatatatgttcaacacaaaatatatttgaaacaaatcttttatat 53918200  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatacta 336  Q
    |||||||||||||||||| | ||||||||||||||||||||||||    
T  53918201 ttttagcaacaatattctccatccatcaaattttgagtcatacta 53918245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 11066429 - 11066346
Alignment:
Q  175 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttca 258  Q
    ||||||| |||| ||||||||||||||||||||  ||||||||| | || ||||||||||||||||||||||||| ||||||||    
T  11066429 aatattctctttaaaaatatatttgcatcaaatattccttcatatggtaaaaaaatatatttattgtccataaatgtattttca 11066346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 339
Target Start/End: Complemental strand, 6561672 - 6561615
Alignment:
Q  282 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  6561672 tcttttatatttttagcaacaatattcttcatccatcaaatttcgagtcatactacaa 6561615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 54287487 - 54287559
Alignment:
Q  186 tcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttca 258  Q
    ||||||||||||||||||||||  ||||||||||  ||||||||| |||||||| ||||||||||||||||||    
T  54287487 tcaaaatatatttgcatcaaatattccttcatacagtacaaaaatgtatttattatccataaatatattttca 54287559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 53974011 - 53974077
Alignment:
Q  191 atatatttgcatcaaatcgtcctt-catacgatacaaaaatatatttattgtccataaatatatttt 256  Q
    |||||||||||||||||| ||||| |||||| ||||||||||||||||||||| |||||||||||||    
T  53974011 atatatttgcatcaaatcttcctttcatacggtacaaaaatatatttattgtctataaatatatttt 53974077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 42990306 - 42990257
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagt 50  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42990306 gttgcctttctaaacccttgtttcagccccctctatctctctctcaaagt 42990257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 10084645 - 10084706
Alignment:
Q  2 ttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||| |||||||||||||||||||  |||||||||||| ||||||||    
T  10084645 ttgcctttctaaacccttgttccagccccctctatctctct--caaagtttgctccgatacaag 10084706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 6063701 - 6063761
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||||||||||||||||||||||    ||||||||||| |||||||||    
T  6063701 gttgcctttctaaacccttgtttcagccccctctatctct----caaagtttgctttgatacaag 6063761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 38890042 - 38889990
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgct 55  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  38890042 gttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttgct 38889990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 455909 - 455867
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  455909 gttgcctttctaaacccttgtttcagccccctctatctctctc 455867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 458286 - 458244
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  458286 gttgcctttctaaacccttgtttcagccccctctatctctctc 458244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 4104150 - 4104192
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  4104150 gttgcctttctaaacccttgtttcagccccctctatctctctc 4104192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 261
Target Start/End: Complemental strand, 11072801 - 11072731
Alignment:
Q  191 atatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 261  Q
    |||||||||||||||||| ||| | ||||| ||||||||| ||||| |||||||||||| |||||||||||    
T  11072801 atatatttgcatcaaatcttccgtaatacggtacaaaaatctatttgttgtccataaatgtattttcagca 11072731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 30005843 - 30005801
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  30005843 gttgcctttctaaacccttgtttcagccccctctatctctctc 30005801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 4308536 - 4308594
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||    
T  4308536 gttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaag 4308594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 11163152 - 11163094
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||    
T  11163152 gttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaag 11163094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 11170406 - 11170348
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||    
T  11170406 gttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaag 11170348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 27101436 - 27101498
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    |||||||||||||||||||||||||||| ||||||||||| || |||  ||||||||||||||||    
T  27101436 gttgcctttctaaacccttgtttcagcctcctctatctctatctcaa--tttgctctgatacaag 27101498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 9604862 - 9604925
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    |||||||||||||||| |||||||||||||||||||||||||| || ||||| |||| |||||||    
T  9604862 gttgcctttctaaacc-ttgtttcagccccctctatctctctctcagagttttctctaatacaag 9604925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 10191565 - 10191626
Alignment:
Q  2 ttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||| ||||||||| |||||||||  |||||||||||| ||||||||    
T  10191565 ttgcctttctaaacccttgttccagccccctttatctctct--caaagtttgctccgatacaag 10191626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 131
Target Start/End: Complemental strand, 6561728 - 6561689
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttc 131  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  6561728 tcataaatttggaacgaatatcacactgaagatacgtttc 6561689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 25533444 - 25533378
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc--tctcgcaaagtttgctctgatacaag 65  Q
    |||||||||||||||||||||||||||||||||||||||  |||| ||||||||   ||||||||||    
T  25533444 gttgcctttctaaacccttgtttcagccccctctatctctctctctcaaagtttagcctgatacaag 25533378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 1321441 - 1321386
Alignment:
Q  3 tgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaa 64  Q
    ||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||    
T  1321441 tgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaa 1321386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 1626938 - 1626976
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1626938 gttgcctttctaaacccttgtttcagccccctctatctc 1626976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 3859530 - 3859492
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3859530 gttgcctttctaaacccttgtttcagccccctctatctc 3859492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 5191655 - 5191617
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5191655 gttgcctttctaaacccttgtttcagccccctctatctc 5191617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 5522870 - 5522908
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5522870 gttgcctttctaaacccttgtttcagccccctctatctc 5522908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 6561812 - 6561774
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6561812 gttgcctttctaaacccttgtttcagccccctctatctc 6561774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 28102257 - 28102295
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28102257 gttgcctttctaaacccttgtttcagccccctctatctc 28102295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 28137550 - 28137588
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28137550 gttgcctttctaaacccttgtttcagccccctctatctc 28137588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 35918204 - 35918242
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  35918204 gttgcctttctaaacccttgtttcagccccctctatctc 35918242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 38210372 - 38210330
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  38210372 gttgcttttctaaacccttgtttcagccccctctatctctctc 38210330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 43226088 - 43226050
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  43226088 gttgcctttctaaacccttgtttcagccccctctatctc 43226050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 45882941 - 45882903
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  45882941 gttgcctttctaaacccttgtttcagccccctctatctc 45882903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 47149150 - 47149188
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  47149150 gttgcctttctaaacccttgtttcagccccctctatctc 47149188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 42992288 - 42992247
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctct 42  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  42992288 gttgcctttttaaacccttgtttcagccccctctatctctct 42992247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 51727261 - 51727319
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    |||||||||||||||||||||||||||||||| |||||      |||||||||||||||||||||    
T  51727261 gttgcctttctaaacccttgtttcagccccctttatct------caaagtttgctctgatacaag 51727319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 331
Target Start/End: Original strand, 53974148 - 53974197
Alignment:
Q  282 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 331  Q
    ||||||||||||||| |||||| ||||||| |||||||||||||||||||    
T  53974148 tcttttatatttttaacaacaacattcttcatccatcaaattttgagtca 53974197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 18099425 - 18099465
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctc 41  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  18099425 gttgccattctaaacccttgtttcagccccctctatctctc 18099465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 29956682 - 29956646
Alignment:
Q  7 tttctaaacccttgtttcagccccctctatctctctc 43  Q
    |||||||||||||||||||||||||||||||||||||    
T  29956682 tttctaaacccttgtttcagccccctctatctctctc 29956646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 50494001 - 50493961
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctc 41  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  50494001 gttgcttttctaaacccttgtttcagccccctctatctctc 50493961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10621785 - 10621827
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    ||||| ||||||||||||||||||||| |||||||||||||||    
T  10621785 gttgcttttctaaacccttgtttcagcaccctctatctctctc 10621827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 331
Target Start/End: Complemental strand, 11072690 - 11072644
Alignment:
Q  285 tttatatttttagcaacaatattcttcttccatcaaattttgagtca 331  Q
    ||||||||||| |||||||| |||||| |||||||||||||||||||    
T  11072690 tttatattttttgcaacaatcttcttcatccatcaaattttgagtca 11072644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 15780862 - 15780824
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  15780862 gttgccattctaaacccttgtttcagccccctctatctc 15780824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 24979709 - 24979671
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  24979709 gttgtctttctaaacccttgtttcagccccctctatctc 24979671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 26720550 - 26720512
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  26720550 gttgcctttctaaacccttatttcagccccctctatctc 26720512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 28100296 - 28100334
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  28100296 gttgcttttctaaacccttgtttcagccccctctatctc 28100334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 32219097 - 32219059
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  32219097 gttgcctttctgaacccttgtttcagccccctctatctc 32219059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 32264294 - 32264332
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  32264294 gttgcctttctaaacccttgtttgagccccctctatctc 32264332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 35777423 - 35777385
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  35777423 gttgcttttctaaacccttgtttcagccccctctatctc 35777385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 43228293 - 43228255
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  43228293 gttgcctttctaaactcttgtttcagccccctctatctc 43228255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 43423718 - 43423756
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  43423718 gttgcctttctaaacccttgtttcagccccctctttctc 43423756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 47701850 - 47701888
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  47701850 gttgcctttctaaacccttgtttcagccccctttatctc 47701888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 51675010 - 51675048
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  51675010 gttgtctttctaaacccttgtttcagccccctctatctc 51675048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 6719357 - 6719394
Alignment:
Q  6 ctttctaaacccttgtttcagccccctctatctctctc 43  Q
    |||||||||||||| |||||||||||||||||||||||    
T  6719357 ctttctaaacccttatttcagccccctctatctctctc 6719394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 10956282 - 10956319
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatct 38  Q
    |||||| |||||||||||||||||||||||||||||||    
T  10956282 gttgccattctaaacccttgtttcagccccctctatct 10956319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 10958578 - 10958615
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatct 38  Q
    |||||| |||||||||||||||||||||||||||||||    
T  10958578 gttgccattctaaacccttgtttcagccccctctatct 10958615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 22114561 - 22114598
Alignment:
Q  2 ttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  22114561 ttgcctttctaaacccttgtttcagccccttctatctc 22114598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 6066051 - 6066110
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    |||||||||||||||||||||||||||||||     |||| || ||||||||||| |||||||||    
T  6066051 gttgcctttctaaacccttgtttcagccccc-----ctctatctcaaagtttgctttgatacaag 6066110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 18097155 - 18097195
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctc 41  Q
    |||||| |||||||||||||||| |||||||||||||||||    
T  18097155 gttgccattctaaacccttgtttgagccccctctatctctc 18097195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 5535882 - 5535929
Alignment:
Q  214 tcatacgatacaaaaatatatttattgtccataaatatattttcagca 261  Q
    |||||||||||||| |||| |||  |||||||||||||||||||||||    
T  5535882 tcatacgatacaaatatatcttttctgtccataaatatattttcagca 5535929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 39
Target Start/End: Original strand, 27635889 - 27635920
Alignment:
Q  8 ttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||||||||||    
T  27635889 ttctaaacccttgtttcagccccctctatctc 27635920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 43
Target Start/End: Complemental strand, 41849147 - 41849112
Alignment:
Q  8 ttctaaacccttgtttcagccccctctatctctctc 43  Q
    ||||||||||||||||||||||||||||||| ||||    
T  41849147 ttctaaacccttgtttcagccccctctatctatctc 41849112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 3314682 - 3314648
Alignment:
Q  5 cctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||| |||||||||||||||||||    
T  3314682 cctttctaaacccttatttcagccccctctatctc 3314648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 5927019 - 5927057
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  5927019 gttgcatttctaaacccttgtttcagccctctctatctc 5927057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 6231451 - 6231413
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||| |||||||||||||| |||||||||    
T  6231451 gttgcctttctaaatccttgtttcagcccgctctatctc 6231413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 28761683 - 28761721
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||| |||||||||||||||||||| |||||||||||||    
T  28761683 gttgtctttctaaacccttgtttcaaccccctctatctc 28761721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 41849059 - 41849021
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgttt 130  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  41849059 tcataaatttggaacaaataccacactgaagatacgttt 41849021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 43421670 - 43421708
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||| |||| ||||||||    
T  43421670 gttgcctttctaaacccttgtttcaaccccttctatctc 43421708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 51943373 - 51943335
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  51943373 gttgcctttctaaacctttgtttcagcaccctctatctc 51943335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 3306795 - 3306762
Alignment:
Q  7 tttctaaacccttgtttcagccccctctatctct 40  Q
    |||||||||||||||||||||||||| |||||||    
T  3306795 tttctaaacccttgtttcagccccctatatctct 3306762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 53468710 - 53468747
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatct 38  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  53468710 gttgccattctaaacccttgtttcagccccctttatct 53468747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 38
Target Start/End: Original strand, 53915760 - 53915788
Alignment:
Q  10 ctaaacccttgtttcagccccctctatct 38  Q
    |||||||||||||||||||||||||||||    
T  53915760 ctaaacccttgtttcagccccctctatct 53915788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 177; Significance: 3e-95; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 140 - 373
Target Start/End: Original strand, 35215983 - 35216216
Alignment:
Q  140 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 239  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  35215983 ctccttcagtgaaagaatatctgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttctttatacgatacaaaaatatatttatt 35216082  T
Q  240 gtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  35216083 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttgagtcatactacaa 35216182  T
Q  340 aattctcaaccttgactccaaattagtgatgatg 373  Q
     |||||| |||||||||| |||||||||||||||    
T  35216183 cattctccaccttgactctaaattagtgatgatg 35216216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 140 - 339
Target Start/End: Complemental strand, 42452650 - 42452451
Alignment:
Q  140 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 239  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  42452650 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttatt 42452551  T
Q  240 gtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  42452550 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttaagtcatactacaa 42452451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 140 - 339
Target Start/End: Original strand, 23452628 - 23452827
Alignment:
Q  140 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 239  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23452628 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 23452727  T
Q  240 gtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||| ||||||||||| ||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  23452728 gtccataaatttattttcagcataaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 23452827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 140 - 339
Target Start/End: Original strand, 35218364 - 35218563
Alignment:
Q  140 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 239  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  35218364 ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttctttatacgatacaaaaatatatttatt 35218463  T
Q  240 gtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  35218464 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttgagtcatactacaa 35218563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 140 - 339
Target Start/End: Original strand, 42923893 - 42924092
Alignment:
Q  140 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 239  Q
    |||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  42923893 ctccttcagtgaaagaatatttgcatcaaaaatataatatttcttttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttatt 42923992  T
Q  240 gtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  42923993 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 42924092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 92 - 339
Target Start/End: Original strand, 27583667 - 27583905
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    |||||||||||||||| ||||||| |||||||||| ||||        |||||||||||||||||||||||||| |||       |||||| ||||||||    
T  27583667 tcataaatttggaacggatatcacgctgaagatacatttctttttt--ctccttcagtgaaagaatatttgcatcaaa-------tattccttttcaaaa 27583757  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||  ||||||||| | || ||||||||||||||||| ||||||||||| ||||||||||||||| ||||       ||||||||||    
T  27583758 tatatttgcatcaaatattccttcatatggtataaaaatatatttattgttcataaatatatcttcagcacaaaatatatttgaaacaaatcttttatat 27583857  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||    
T  27583858 ttttagcaacaatattcttcatccatcaaaatttgagtcatactacaa 27583905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 175 - 331
Target Start/End: Original strand, 28568584 - 28568740
Alignment:
Q  175 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttg 274  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||    
T  28568584 aatattccctttcaaaatatatttgcatcaaatcttccttcacacgatacaaaaatatatttattgtccataaatatattttcaaaacaaaatatatttg 28568683  T
Q  275 nnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 331  Q
           ||||||||| |||||||||||||||||||| || ||||||||||||||||    
T  28568684 aaacaaatcttttatagttttagcaacaatattcttcatctatcaaattttgagtca 28568740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 175 - 261
Target Start/End: Complemental strand, 15693755 - 15693669
Alignment:
Q  175 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 261  Q
    ||||| |||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  15693755 aatatcccctttaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatttattgcccataaatatattttcagca 15693669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 211 - 339
Target Start/End: Original strand, 27136367 - 27136503
Alignment:
Q  211 ccttcatacgatacaaaaatatatttattgtccataaatatattt--------tcagcacaaaatatctttgnnnnnnntcttttatatttttagcaaca 302  Q
    |||||||||| |||||||||||||||||| |||||||||||||||        ||| |||||||||| ||||       |||||||||||||||||| ||    
T  27136367 ccttcatacggtacaaaaatatatttattttccataaatatatttatatattttcaacacaaaatatatttgaaacaaatcttttatatttttagcacca 27136466  T
Q  303 atattcttcttccatcaaattttgagtcatactacaa 339  Q
    ||||||||| |||||||||||||||||||||||||||    
T  27136467 atattcttcatccatcaaattttgagtcatactacaa 27136503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 246 - 334
Target Start/End: Original strand, 34575608 - 34575696
Alignment:
Q  246 aaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatac 334  Q
    |||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  34575608 aaatatattttcagcacaaaatatatttagaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttgagtcatac 34575696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 175 - 260
Target Start/End: Complemental strand, 7502723 - 7502638
Alignment:
Q  175 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagc 260  Q
    |||||| ||||| ||||||||||||||||||||| ||  |||||| |||||||||||| |||||||| ||||||||||||||||||    
T  7502723 aatatttcctttaaaaatatatttgcatcaaatcttctgtcatacaatacaaaaatatttttattgttcataaatatattttcagc 7502638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 190 - 261
Target Start/End: Complemental strand, 39287042 - 39286971
Alignment:
Q  190 aatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 261  Q
    ||||||||||||||||||| || |||||| | ||||||||||||||||||||||||||||||||||| ||||    
T  39287042 aatatatttgcatcaaatcttcattcatatggtacaaaaatatatttattgtccataaatatattttaagca 39286971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 261
Target Start/End: Original strand, 41304806 - 41304884
Alignment:
Q  182 cctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 261  Q
    ||||| ||||||||||||||||||||| ||||||||| | |||||||||||||||| | |||||||||||||| ||||||    
T  41304806 cctttaaaaatatatttgcatcaaatcttccttcatatg-tacaaaaatatatttactatccataaatatattgtcagca 41304884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 140 - 236
Target Start/End: Original strand, 34575528 - 34575617
Alignment:
Q  140 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatattt 236  Q
    |||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||||||  ||||| ||| | |||||||||||||||    
T  34575528 ctccttcagtgaaagaatatttgcatcaaa-------tattccctttcaaaatatatttgcatcaaattttcctttatatggtacaaaaatatattt 34575617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 183 - 261
Target Start/End: Original strand, 41303457 - 41303535
Alignment:
Q  183 ctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 261  Q
    |||| |||||||||||| ||||| || ||||||| ||| ||||||| |||||||| |||||||||||||||||||||||    
T  41303457 ctttaaaaatatatttgaatcaattcttccttcacacggtacaaaattatatttactgtccataaatatattttcagca 41303535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 5377686 - 5377748
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    |||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||| |||||    
T  5377686 gttgcctttctaaacccttgtttcagtcccctctatctctct--caaagtttgctctgaaacaag 5377748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 24162469 - 24162527
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||    
T  24162469 gttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaag 24162527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 331
Target Start/End: Complemental strand, 28568395 - 28568346
Alignment:
Q  282 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 331  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  28568395 tcttttatatttttaacaacaatattcttcatccatcaaattttgagtca 28568346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 38020200 - 38020161
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctct 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  38020200 gttgcctttctaaacccttgtttcagccccctctatctct 38020161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 13910301 - 13910339
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13910301 gttgcctttctaaacccttgtttcagccccctctatctc 13910339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 19007638 - 19007600
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19007638 gttgcctttctaaacccttgtttcagccccctctatctc 19007600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 19504602 - 19504640
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19504602 gttgcctttctaaacccttgtttcagccccctctatctc 19504640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 23452494 - 23452536
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  23452494 gttgcctttctaaacccttgtttcagccccctctgtctctctc 23452536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 31733022 - 31733060
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  31733022 gttgcctttctaaacccttgtttcagccccctctatctc 31733060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 35215843 - 35215885
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  35215843 gttgcttttctaaacccttgtttcagccccctctatctctctc 35215885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 35218220 - 35218262
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  35218220 gttgcttttctaaacccttgtttcagccccctctatctctctc 35218262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 40032315 - 40032353
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  40032315 gttgcctttctaaacccttgtttcagccccctctatctc 40032353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 42452781 - 42452743
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  42452781 gttgcctttctaaacccttgtttcagccccctctatctc 42452743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21520950 - 21520990
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctc 41  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  21520950 gttgcctttctaaacccttgtttcagccccatctatctctc 21520990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 45280248 - 45280300
Alignment:
Q  7 tttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||||||||||||||      |||||||||||||||||||||    
T  45280248 tttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaag 45280300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 6264402 - 6264440
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  6264402 gttgcctttctaaacctttgtttcagccccctctatctc 6264440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 331
Target Start/End: Complemental strand, 15693629 - 15693583
Alignment:
Q  285 tttatatttttagcaacaatattcttcttccatcaaattttgagtca 331  Q
    ||||||||||||||||||||||| ||| ||||||||||||| |||||    
T  15693629 tttatatttttagcaacaatattattcatccatcaaattttaagtca 15693583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 22163204 - 22163242
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  22163204 gttgcctttctaaatccttgtttcagccccctctatctc 22163242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 22287593 - 22287631
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  22287593 gttgcctttctaaacccttgtttcagccccctatatctc 22287631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 27104797 - 27104759
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  27104797 gttgcctttctgaacccttgtttcagccccctctatctc 27104759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 28196635 - 28196597
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  28196635 gttgcctttctaaacctttgtttcagccccctctatctc 28196597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 42064513 - 42064475
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  42064513 gttgcctttctaaacccttgtttcagctccctctatctc 42064475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 17849110 - 17849077
Alignment:
Q  6 ctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||||||||||||    
T  17849110 ctttctaaacccttgtttcagccccctctatctc 17849077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 22874134 - 22874102
Alignment:
Q  7 tttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||    
T  22874134 tttctaaacccttgtttcagccccctctatctc 22874102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 37963190 - 37963222
Alignment:
Q  7 tttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||    
T  37963190 tttctaaacccttgtttcagccccctctatctc 37963222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 42923766 - 42923806
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctc 41  Q
    |||||| ||||||||||||||||||||| ||||||||||||    
T  42923766 gttgccattctaaacccttgtttcagcctcctctatctctc 42923806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 11739817 - 11739855
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||| ||||||||||||||||| ||||||||||||||||    
T  11739817 gttgtctttctaaacccttgttccagccccctctatctc 11739855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 19502268 - 19502306
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||| |||||||||||||||| ||||||    
T  19502268 gttgcctttctaaactcttgtttcagccccctttatctc 19502306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 22407666 - 22407704
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  22407666 gttgcctttctaaacccttgtttcagcaccctatatctc 22407704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 34979840 - 34979874
Alignment:
Q  5 cctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||| |||||||||||||||||||||||    
T  34979840 cctttctaaacgcttgtttcagccccctctatctc 34979874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 38020141 - 38020103
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||| || |||||||||||||    
T  38020141 gttgcctttctaaacccttgttccaaccccctctatctc 38020103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 331
Target Start/End: Original strand, 41303573 - 41303623
Alignment:
Q  282 tcttttatatttt-tagcaacaatattcttcttccatcaaattttgagtca 331  Q
    ||||||||||||| |||||||||| |||||| ||||||||||| |||||||    
T  41303573 tcttttatattttttagcaacaatcttcttcatccatcaaattctgagtca 41303623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 43623825 - 43623863
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||| |||||||| |||||||||||||    
T  43623825 gttgcctttctaaaccattgtttcacccccctctatctc 43623863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 45239238 - 45239275
Alignment:
Q  6 ctttctaaacccttgtttcagccccctctatctctctc 43  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  45239238 ctttctaaatcattgtttcagccccctctatctctctc 45239275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 18800565 - 18800597
Alignment:
Q  7 tttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||| ||||||    
T  18800565 tttctaaacccttgtttcagccccctatatctc 18800597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 175; Significance: 4e-94; HSPs: 4)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 92 - 375
Target Start/End: Complemental strand, 51955 - 51675
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    |||||||||||||||||||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  51955 tcataaatttggaacgaataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 51859  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||       ||||||||||    
T  51858 tatatttgcatcaaatcgttctttatacggtacaaaaatatatttattgtccataaatatattttcaccacaaaatatatttgaaacaaatcttttatat 51759  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatgtc 375  Q
    ||||||||||| |||||| | ||||||||||||||||||||||||||| |||||| |||||||||| ||||||| |||||||||    
T  51758 ttttagcaacattattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattagcgatgatgtc 51675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 339
Target Start/End: Complemental strand, 50218 - 50161
Alignment:
Q  282 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  50218 tcttttatatttttagcaacattattcttcatccatcaaattttgagtcatactacaa 50161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 52042 - 52002
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctc 41  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  52042 gttgccattctaaacccttgtttcagccccctctatctctc 52002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 222 - 261
Target Start/End: Complemental strand, 170115 - 170076
Alignment:
Q  222 tacaaaaatatatttattgtccataaatatattttcagca 261  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  170115 tacaaaaatatatttgttgtccatgaatatattttcagca 170076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 168; Significance: 6e-90; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 92 - 339
Target Start/End: Complemental strand, 608720 - 608472
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtt-tcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaa 190  Q
    ||||||||||||||| |||||||||| ||||||||||| |         |||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  608720 tcataaatttggaacaaatatcacaccgaagatacgttcttttttttttctccttcagtgaaagaatatttgcataaaatatataatattctctttcaaa 608621  T
Q  191 atatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttata 290  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||    
T  608620 atatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttata 608521  T
Q  291 tttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  608520 tttttagcaacaatattcttcttccatcaaattttgagtgatactacaa 608472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 92 - 375
Target Start/End: Complemental strand, 41384738 - 41384459
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    |||||||||||||||||||| ||||||||||||||||||          ||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  41384738 tcataaatttggaacgaataccacactgaagatacgtttttttttt---tccttcaatgaaagaatatttgcataaaaa-tataatattccctttcaaaa 41384643  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| || |       ||||||||||    
T  41384642 tatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagtataaaatatattcgaaacaaatcttttatat 41384543  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatgtc 375  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||    
T  41384542 ttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattagtgatgatgtc 41384459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 92 - 336
Target Start/End: Complemental strand, 15809208 - 15808967
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15809208 tcataaatttggaacaaataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 15809112  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||       ||||||||||    
T  15809111 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcaacacaaaatatatttgaaacaaatcttttatat 15809012  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatacta 336  Q
    |||||||||||||||||| | ||||||||||||||||||||||||    
T  15809011 ttttagcaacaatattctccatccatcaaattttgagtcatacta 15808967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 43530206 - 43529873
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaagcaccgaatgcaatg-agatggacatcatcataaat 99  Q
    ||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||  |   ||  |  | | | | | | | ||||||||    
T  43530206 gttgcttttctaaacccttgtttcagccccctctatctctctc--aaagtttgctctgatacaaggtctatatttatagtaaaagtataac-tcataaat 43530110  T
Q  100 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 199  Q
    ||||||  |||| |||||||||||||| |||         ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43530109 ttggaataaataccacactgaagatactttt---ttttttctccttcagtgaaagaatattagcataaaaaatataatattccctttcaaaatatatttg 43530013  T
Q  200 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 299  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  43530012 catcaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 43529913  T
Q  300 acaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  43529912 acaatattctccatccatcaaattttgagtcatactacaa 43529873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 92 - 339
Target Start/End: Original strand, 28283567 - 28283811
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    ||||||||||||||| ||||| |||||||||||||||||         |||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  28283567 tcataaatttggaacaaatattacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattcactttcaaaa 28283663  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  28283664 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 28283763  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    ||||||||| |||||||| | |||||||||||||||||||||||||||    
T  28283764 ttttagcaaaaatattctccatccatcaaattttgagtcatactacaa 28283811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 140 - 339
Target Start/End: Complemental strand, 3873952 - 3873752
Alignment:
Q  140 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcg-tccttcatacgatacaaaaatatatttat 238  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  3873952 ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgtttcttcatacgatacaaaaatatatttat 3873853  T
Q  239 tgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactaca 338  Q
    ||||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  3873852 tgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactaca 3873753  T
Q  339 a 339  Q
    |    
T  3873752 a 3873752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 92 - 339
Target Start/End: Complemental strand, 41382666 - 41382421
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    |||||||||||||||||||| ||||||||||||||||||         ||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  41382666 tcataaatttggaacgaataccacactgaagatacgttt--tttttttctcattcagtgaaagaatatttgcataaaaaatataatatttcctttcaaaa 41382569  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| || |       ||||||||||    
T  41382568 tatatttgcatcaaatcgttgttcatacggtacaaaaatatatttattgtccataaatatattttcagtataaaatatattcgaaacaaatcttttatat 41382469  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    ||||| |||||||||||| | |||||||||||||||||||||||||||    
T  41382468 ttttaacaacaatattctccatccatcaaattttgagtcatactacaa 41382421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 183 - 339
Target Start/End: Complemental strand, 32339252 - 32339096
Alignment:
Q  183 ctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnnt 282  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       |    
T  32339252 ctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaat 32339153  T
Q  283 cttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  32339152 cttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 32339096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 224 - 339
Target Start/End: Original strand, 3265635 - 3265750
Alignment:
Q  224 caaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaatt 323  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||    
T  3265635 caaacatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatt 3265734  T
Q  324 ttgagtcatactacaa 339  Q
    ||||||||||||||||    
T  3265735 ttgagtcatactacaa 3265750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 92 - 190
Target Start/End: Complemental strand, 181530 - 181434
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaa 190  Q
    |||||||||||||||||||| ||||||||||||||||||         |||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  181530 tcataaatttggaacgaataccacactgaagatacgttt--ttttcttctcctttagtgaaagaatatttgcatcaaaaatataatattccctttcaaa 181434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 24873438 - 24873502
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||    
T  24873438 gttgcctttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaag 24873502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 12517281 - 12517341
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||    
T  12517281 gttgcctttctaaacccttgtttcagccccctctatctct----caaagtttgctctgatacaag 12517341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 261
Target Start/End: Original strand, 11701364 - 11701447
Alignment:
Q  175 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 261  Q
    |||||||||||| ||||||||||| |||||| || |||   ||||| |||||||||||||||| || ||||||||||||||||||||    
T  11701364 aatattccctttaaaaatatatttacatcaattcttcc---atacggtacaaaaatatatttactgaccataaatatattttcagca 11701447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 28283476 - 28283540
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||    
T  28283476 gttgccattctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaag 28283540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 32339387 - 32339345
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  32339387 gttgcctttctaaacccttgtttcagccccctctatctctctc 32339345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 14807829 - 14807771
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||    
T  14807829 gttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaag 14807771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 3886175 - 3886232
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaa 64  Q
    ||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||    
T  3886175 gttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaa 3886232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 608812 - 608746
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc--tctcgcaaagtttgctctgatacaag 65  Q
    ||||| |||||||||||||||||||||||||||||||||  |||| ||||||||||| ||||| |||    
T  608812 gttgcatttctaaacccttgtttcagccccctctatctctctctctcaaagtttgctatgatataag 608746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 258
Target Start/End: Original strand, 13986214 - 13986285
Alignment:
Q  187 caaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttca 258  Q
    |||||||||||||||||||||| || ||||| || ||||||||| |||| | | ||||||||||||||||||    
T  13986214 caaaatatatttgcatcaaatcttctttcatgcggtacaaaaatttattaactatccataaatatattttca 13986285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 22684913 - 22684981
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctcta----tctctctcgcaaagtttgctctgatacaag 65  Q
    |||| ||||||||||||||||||||||| ||||||    |||||||| |||||||||||||||||||||    
T  22684913 gttgtctttctaaacccttgtttcagcctcctctatctctctctctctcaaagtttgctctgatacaag 22684981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 5622995 - 5623033
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5622995 gttgcctttctaaacccttgtttcagccccctctatctc 5623033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 14419448 - 14419486
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14419448 gttgcctttctaaacccttgtttcagccccctctatctc 14419486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 15072788 - 15072750
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15072788 gttgcctttctaaacccttgtttcagccccctctatctc 15072750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 18810786 - 18810748
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18810786 gttgcctttctaaacccttgtttcagccccctctatctc 18810748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 25952599 - 25952561
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25952599 gttgcctttctaaacccttgtttcagccccctctatctc 25952561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 26775279 - 26775241
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26775279 gttgcctttctaaacccttgtttcagccccctctatctc 26775241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 27107154 - 27107192
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27107154 gttgcctttctaaacccttgtttcagccccctctatctc 27107192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 27827064 - 27827026
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27827064 gttgcctttctaaacccttgtttcagccccctctatctc 27827026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 27829375 - 27829337
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27829375 gttgcctttctaaacccttgtttcagccccctctatctc 27829337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 33541645 - 33541683
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  33541645 gttgcctttctaaacccttgtttcagccccctctatctc 33541683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 35872635 - 35872673
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  35872635 gttgcctttctaaacccttgtttcagccccctctatctc 35872673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 37214467 - 37214505
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  37214467 gttgcctttctaaacccttgtttcagccccctctatctc 37214505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 43082051 - 43082009
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  43082051 gttgcttttctaaacccttgtttcagccccctctatctctctc 43082009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 44720921 - 44720883
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  44720921 gttgcctttctaaacccttgtttcagccccctctatctc 44720883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 4424096 - 4424038
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    |||||||||||||| |||||||||||||||||||||||      |||||||||||||||||||||    
T  4424096 gttgcctttctaaatccttgtttcagccccctctatct------caaagtttgctctgatacaag 4424038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 15809297 - 15809235
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    |||||||||||||||||||||||||||||||| |||||||||  ||||||||   ||||||||||    
T  15809297 gttgcctttctaaacccttgtttcagccccctttatctctct--caaagtttagcctgatacaag 15809235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 36865616 - 36865579
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatct 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36865616 gttgcctttctaaacccttgtttcagccccctctatct 36865579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1225244 - 1225206
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  1225244 gttgtctttctaaacccttgtttcagccccctctatctc 1225206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 3874088 - 3874046
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  3874088 gttgtctttctaaacccttgtttcagcccccgctatctctctc 3874046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 13858741 - 13858779
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  13858741 gttgcctttctaaacccttgtttcatccccctctatctc 13858779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 331
Target Start/End: Original strand, 13986328 - 13986374
Alignment:
Q  285 tttatatttttagcaacaatattcttcttccatcaaattttgagtca 331  Q
    |||||||||||||||||||| |||||| ||||| |||||||||||||    
T  13986328 tttatatttttagcaacaatcttcttcatccataaaattttgagtca 13986374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 14477354 - 14477316
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  14477354 gttgcctttctaaacccttgtttcaaccccctctatctc 14477316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 15068059 - 15068021
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  15068059 gttgcctttctaaacccttgtttcagccccttctatctc 15068021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 18812971 - 18812933
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  18812971 gttgcctttctaaacccttgtttcagcctcctctatctc 18812933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 11701435 - 11701479
Alignment:
Q  287 tatatttttagcaacaatattcttcttccatcaaattttgagtca 331  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||    
T  11701435 tatattttcagcaacaatcttcttcgtccatcaaattttgagtca 11701479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 39
Target Start/End: Complemental strand, 27911086 - 27911055
Alignment:
Q  8 ttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||||||||||    
T  27911086 ttctaaacccttgtttcagccccctctatctc 27911055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 39
Target Start/End: Complemental strand, 27957505 - 27957474
Alignment:
Q  8 ttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||||||||||    
T  27957505 ttctaaacccttgtttcagccccctctatctc 27957474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 181615 - 181577
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  181615 gttgccattctaagcccttgtttcagccccctctatctc 181577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 5372435 - 5372472
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  5372435 gttgcctttctaaacccttgtttcag-cccctctatctc 5372472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 30480760 - 30480798
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||||| |||| ||||||||    
T  30480760 gttgcctttctaaacccttgtttcaaccccttctatctc 30480798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 32339298 - 32339260
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgttt 130  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  32339298 tcataaatttggaacaaataccacactgaagatacgttt 32339260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 43079680 - 43079639
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    ||||| ||||||||||||||||||||||||| |||||||||||    
T  43079680 gttgcttttctaaacccttgtttcagccccc-ctatctctctc 43079639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 331
Target Start/End: Original strand, 30679208 - 30679256
Alignment:
Q  282 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 331  Q
    |||||| |||||||| ||||| |||||||| |||||||||||||||||||    
T  30679208 tcttttttatttttaccaaca-tattcttcatccatcaaattttgagtca 30679256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 21480586 - 21480554
Alignment:
Q  7 tttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||| ||||||||    
T  21480586 tttctaaacccttgtttcagccccatctatctc 21480554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 92 - 339
Target Start/End: Original strand, 11815 - 12059
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    |||||||||||||||||||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11815 tcataaatttggaacgaataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 11911  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||       | ||||||||    
T  11912 tatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaattttttatat 12011  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||| | ||||||||||||||| |||||||||||    
T  12012 ttttagcaacaatattctccatccatcaaattttgaatcatactacaa 12059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 143; Significance: 5e-75; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 92 - 339
Target Start/End: Complemental strand, 79131 - 78885
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 191  Q
    |||||||||||||||||||| |||||||||||||| |||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  79131 tcataaatttggaacgaataccacactgaagatacattt-tttttttcctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 79033  T
Q  192 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 291  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||| |||||||||||||||| |||| ||||||| ||||       ||||||||||    
T  79032 tatatttgcatcaaatcgttcttcatacagtacaaaaatatatttattatccataaatatatttttagcagaaaatatatttgagacaaatcttttatat 78933  T
Q  292 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 339  Q
    |||||||||||||||||| | ||||||||||||| |||||||||||||    
T  78932 ttttagcaacaatattctccatccatcaaattttaagtcatactacaa 78885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 79216 - 79178
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  79216 gttgcctttctaaacccttgttttagccccctctatctc 79178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 89; Significance: 9e-43; HSPs: 2)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 193 - 346
Target Start/End: Complemental strand, 4694 - 4541
Alignment:
Q  193 atatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatt 292  Q
    ||||||||||||||| |||||||||||  ||||||||||||| ||||||||||||||||||||||||||| |||||| || |       |||||||||||    
T  4694 atatttgcatcaaattgtccttcatacagtacaaaaatatatatattgtccataaatatattttcagcacgaaatatattcgaaacaaatcttttatatt 4595  T
Q  293 tttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctc 346  Q
    ||||||||||||||||||| ||||||||||||||||| ||||| ||| ||||||    
T  4594 tttagcaacaatattcttcatccatcaaattttgagttatactgcaacattctc 4541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 92 - 131
Target Start/End: Complemental strand, 4761 - 4722
Alignment:
Q  92 tcataaatttggaacgaatatcacactgaagatacgtttc 131  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  4761 tcataaatttgaaacgaatatcacactgaagatacgtttc 4722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 247 - 373
Target Start/End: Original strand, 1 - 127
Alignment:
Q  247 aatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctc 346  Q
    ||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||    
T  1 aatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctc 100  T
Q  347 aaccttgactccaaattagtgatgatg 373  Q
     |||||||||| |||||||||||||||    
T  101 caccttgactctaaattagtgatgatg 127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 81; Significance: 5e-38; HSPs: 3)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 226 - 339
Target Start/End: Original strand, 2070 - 2183
Alignment:
Q  226 aaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaatttt 325  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||||    
T  2070 aaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttt 2169  T
Q  326 gagtcatactacaa 339  Q
    ||||||||||||||    
T  2170 gagtcatactacaa 2183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 2022 - 2080
Alignment:
Q  140 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatattt 198  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  2022 ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatattt 2080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 1895 - 1927
Alignment:
Q  8 ttctaaacccttgtttcagccccctctatctct 40  Q
    ||||||||||||||||||||| |||||||||||    
T  1895 ttctaaacccttgtttcagccacctctatctct 1927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 69548 - 69606
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgata 61  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  69548 gttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttgctctgata 69606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 73280 - 73340
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgataca 63  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||| || |||||||    
T  73280 gttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttcctttgataca 73340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 57836 - 57905
Alignment:
Q  188 aaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttca 258  Q
    ||||||||||||||||||||  || |||||||| |||||||||||||||||||| |||| |||||||||||    
T  57836 aaaatatatttgcatcaaattttc-ttcatacggtacaaaaatatatttattgttcatacatatattttca 57905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 2911 - 2853
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||    
T  2911 gttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaag 2853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 41740 - 41798
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    ||||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||    
T  41740 gttgcctttctaaacccttgtttcagccccctctatctct------aagtttgctctgatacaag 41798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 72 - 24
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaag 49  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  72 gttgcttttctaaacccttgtttcagccccctctatctctctctcaaag 24  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 4028 - 3990
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4028 gttgcctttctaaacccttgtttcagccccctctatctc 3990  T

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Target: scaffold0068 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29202 - 29160
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctc 43  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  29202 gttgcctttttaaacccttgtttcagccccctctatctctctc 29160  T

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Target: scaffold0552 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 1088 - 1146
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    |||||||||||||||||||||||||||||| |||||||      |||||||||||||||||||||    
T  1088 gttgcctttctaaacccttgtttcagccccttctatct------caaagtttgctctgatacaag 1146  T

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Target: scaffold0472 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 6230 - 6192
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  6230 gttgcttttctaaacccttgtttcagccccctctatctc 6192  T

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Target: scaffold0004 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 79890 - 79852
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctc 39  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  79890 gttgtctttctaaacccttgtttcagccccctctatctc 79852  T

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Target: scaffold0131 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 15050 - 14992
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaag 65  Q
    |||||||||||||| | |||||||||||||||||||||      |||||||||||||||||||||    
T  15050 gttgcctttctaaatcattgtttcagccccctctatct------caaagtttgctctgatacaag 14992  T

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Target: scaffold0131; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 14639 - 14679
Alignment:
Q  1 gttgcctttctaaacccttgtttcagccccctctatctctc 41  Q
    |||| ||||||||||| |||||||| |||||||||||||||    
T  14639 gttgtctttctaaaccattgtttcatccccctctatctctc 14679  T

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Target: scaffold0533 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 237
Target Start/End: Original strand, 1971 - 2018
Alignment:
Q  190 aatatatttgcatcaaatcgtccttcatacgatacaaaaatatattta 237  Q
    |||||||||| |||||||  ||||||||| ||||||||||||||||||    
T  1971 aatatatttgtatcaaatattccttcatatgatacaaaaatatattta 2018  T

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Target: scaffold0474 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 331
Target Start/End: Complemental strand, 10492 - 10443
Alignment:
Q  282 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 331  Q
    ||||||||||||||| ||||||| || ||  |||||||||||||||||||    
T  10492 tcttttatatttttaacaacaatcttttttatccatcaaattttgagtca 10443  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 343 - 375
Target Start/End: Complemental strand, 35579 - 35547
Alignment:
Q  343 tctcaaccttgactccaaattagtgatgatgtc 375  Q
    |||| ||||||||||||||||||||||||||||    
T  35579 tctccaccttgactccaaattagtgatgatgtc 35547  T

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