View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17545_low_12 (Length: 241)
Name: NF17545_low_12
Description: NF17545
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17545_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 36 - 223
Target Start/End: Complemental strand, 6863928 - 6863743
Alignment:
| Q |
36 |
atcattttttgaagttgcaagctttatggcttgtgttcctcgttgagacctctccttgtttttctgctttttagtttatttccaattttgcagacctaat |
135 |
Q |
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| T |
6863928 |
atcattttttgaagttgcaagctttatggcttgtgttcctcgttgagatctctccttgtttttctgctttttggtttatttgcaattttgcagacctaat |
6863829 |
T |
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| Q |
136 |
aatatgatcatattcttgtataaatagttgatcatcactttannnnnnnnnnnnngagaggaaatagtgtatcatcacttgtttaatc |
223 |
Q |
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| T |
6863828 |
a--atgatcatattcttgtataaatagttgatcatcactttatttttatctttttgagaggaaatagtgtatcatcacttgtttaatc |
6863743 |
T |
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