View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17545_low_6 (Length: 299)
Name: NF17545_low_6
Description: NF17545
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17545_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 14 - 283
Target Start/End: Complemental strand, 13981901 - 13981632
Alignment:
| Q |
14 |
aatattacaatgtacataagtgaaaattaagatcaaagcacaaattaccatcttggttttatttagaaacttggcatgagttgtgatatcaatggtggca |
113 |
Q |
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| T |
13981901 |
aatattacaatgtacataagtgaaaattaagatcaaagcacaaattaccatcttggttttatttagaaacttggcatgagttgtgatagcaatggtggca |
13981802 |
T |
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| Q |
114 |
cccaaatatttaaagttctaggttgcaagttgtatgcgatattttaaaactcacgatttcgtatagaactgtattccagcagataatgtatttaagaagg |
213 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13981801 |
cccaaatatttaaagttctaggttgcaagtggtatgcgatattttaaaactcacgatttcgtatagaactgtattccagcagataatgtatttaagaagg |
13981702 |
T |
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| Q |
214 |
aaatattattatggaattggattcaaataatgctatagctttggtggaaaacaatgagacaagtccttgg |
283 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13981701 |
aaatattattatggaattggattcaaataatgctatagctttggtggaaaacaatgagacaagtccttgg |
13981632 |
T |
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