View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1755-Insertion-5 (Length: 860)

Name: NF1755-Insertion-5
Description: NF1755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1755-Insertion-5
NF1755-Insertion-5
[»] chr5 (47 HSPs)
chr5 (35-253)||(41309890-41310108)
chr5 (35-253)||(19546048-19546265)
chr5 (35-253)||(25073621-25073839)
chr5 (35-253)||(25131592-25131810)
chr5 (35-253)||(40690775-40690993)
chr5 (35-253)||(26701231-26701448)
chr5 (35-253)||(26970964-26971181)
chr5 (549-841)||(17081056-17081352)
chr5 (267-362)||(35781247-35781342)
chr5 (267-354)||(35040526-35040613)
chr5 (300-362)||(20515455-20515517)
chr5 (300-362)||(38184156-38184218)
chr5 (300-362)||(38214139-38214201)
chr5 (300-361)||(35041686-35041747)
chr5 (300-353)||(35781773-35781826)
chr5 (300-352)||(2211399-2211451)
chr5 (300-358)||(1349523-1349581)
chr5 (709-799)||(28789380-28789470)
chr5 (300-357)||(40591180-40591237)
chr5 (300-352)||(36197553-36197605)
chr5 (267-358)||(12546007-12546098)
chr5 (300-351)||(34383255-34383306)
chr5 (300-359)||(35041321-35041380)
chr5 (307-354)||(35041931-35041978)
chr5 (300-354)||(28793875-28793929)
chr5 (301-359)||(30054635-30054693)
chr5 (300-350)||(35040861-35040911)
chr5 (133-245)||(365940-366052)
chr5 (267-353)||(18585568-18585654)
chr5 (267-309)||(30054588-30054630)
chr5 (306-359)||(5249218-5249271)
chr5 (166-247)||(34271461-34271542)
chr5 (265-352)||(25095740-25095828)
chr5 (265-352)||(25153710-25153798)
chr5 (300-351)||(6538198-6538249)
chr5 (267-353)||(17342369-17342456)
chr5 (300-355)||(25458329-25458384)
chr5 (303-345)||(4728026-4728068)
chr5 (300-354)||(35041467-35041521)
chr5 (300-362)||(38494358-38494420)
chr5 (133-217)||(23309897-23309981)
chr5 (300-343)||(5246398-5246441)
chr5 (300-339)||(19134645-19134684)
chr5 (300-350)||(6429657-6429707)
chr5 (267-352)||(25098519-25098605)
chr5 (267-352)||(25157610-25157696)
chr5 (300-346)||(27124266-27124312)
[»] chr2 (39 HSPs)
chr2 (35-253)||(26223655-26223873)
chr2 (267-353)||(21479095-21479181)
chr2 (264-352)||(7495474-7495562)
chr2 (267-358)||(43968678-43968769)
chr2 (661-841)||(28968983-28969163)
chr2 (267-356)||(40662868-40662957)
chr2 (267-361)||(41347421-41347515)
chr2 (300-361)||(31667378-31667439)
chr2 (300-359)||(24545797-24545856)
chr2 (280-361)||(30666193-30666274)
chr2 (280-361)||(30668776-30668857)
chr2 (278-354)||(39844340-39844416)
chr2 (300-362)||(37201517-37201578)
chr2 (300-362)||(43004777-43004839)
chr2 (300-357)||(14787070-14787127)
chr2 (300-357)||(21479276-21479333)
chr2 (300-352)||(34454050-34454102)
chr2 (307-357)||(40662982-40663032)
chr2 (304-361)||(11667069-11667126)
chr2 (300-353)||(36950496-36950549)
chr2 (267-320)||(41145017-41145070)
chr2 (302-354)||(645370-645422)
chr2 (267-359)||(7075010-7075102)
chr2 (300-356)||(15458816-15458872)
chr2 (307-354)||(9420130-9420177)
chr2 (300-351)||(43968344-43968394)
chr2 (300-361)||(30620471-30620532)
chr2 (300-361)||(30623092-30623153)
chr2 (300-353)||(38722725-38722778)
chr2 (300-351)||(42676341-42676392)
chr2 (300-342)||(44833304-44833346)
chr2 (300-352)||(9977794-9977846)
chr2 (300-352)||(27719811-27719863)
chr2 (133-245)||(40031340-40031452)
chr2 (307-355)||(40663055-40663102)
chr2 (183-253)||(15861863-15861931)
chr2 (302-352)||(34453627-34453677)
chr2 (323-352)||(932768-932797)
chr2 (290-355)||(7618714-7618779)
[»] chr6 (15 HSPs)
chr6 (35-253)||(24497659-24497877)
chr6 (193-253)||(9290057-9290117)
chr6 (50-220)||(12313459-12313629)
chr6 (300-355)||(7204971-7205026)
chr6 (300-362)||(26001411-26001473)
chr6 (300-363)||(14094221-14094284)
chr6 (300-355)||(24007041-24007096)
chr6 (300-360)||(21980774-21980834)
chr6 (308-358)||(20469483-20469533)
chr6 (276-342)||(26209020-26209086)
chr6 (300-358)||(33438533-33438591)
chr6 (306-355)||(891149-891198)
chr6 (290-352)||(10780311-10780373)
chr6 (133-216)||(12068264-12068348)
chr6 (300-334)||(2258867-2258901)
[»] chr8 (35 HSPs)
chr8 (35-253)||(18558763-18558981)
chr8 (35-253)||(5660758-5660976)
chr8 (300-358)||(6007540-6007598)
chr8 (300-360)||(35308304-35308364)
chr8 (300-362)||(4443839-4443901)
chr8 (300-361)||(1153830-1153891)
chr8 (300-357)||(17073146-17073203)
chr8 (300-357)||(17575067-17575124)
chr8 (277-361)||(40796310-40796394)
chr8 (300-358)||(27882615-27882673)
chr8 (300-358)||(28022795-28022853)
chr8 (267-351)||(5424605-5424689)
chr8 (300-352)||(15199604-15199656)
chr8 (300-356)||(27917420-27917476)
chr8 (300-356)||(27963839-27963895)
chr8 (300-356)||(33489493-33489549)
chr8 (302-357)||(27882060-27882115)
chr8 (302-357)||(28022241-28022296)
chr8 (289-355)||(27881198-27881264)
chr8 (300-358)||(27965833-27965891)
chr8 (289-355)||(28021379-28021445)
chr8 (300-354)||(35102737-35102791)
chr8 (300-352)||(5764755-5764807)
chr8 (300-359)||(339720-339779)
chr8 (300-359)||(5424240-5424299)
chr8 (300-359)||(11464655-11464714)
chr8 (302-357)||(27964682-27964737)
chr8 (784-841)||(32009354-32009411)
chr8 (314-359)||(5765537-5765582)
chr8 (309-345)||(28828531-28828567)
chr8 (323-359)||(40737286-40737322)
chr8 (300-359)||(6007478-6007537)
chr8 (304-351)||(45045540-45045587)
chr8 (302-344)||(17072756-17072798)
chr8 (302-344)||(17575473-17575515)
[»] chr1 (47 HSPs)
chr1 (35-250)||(20569781-20569996)
chr1 (35-253)||(26473861-26474079)
chr1 (35-253)||(27301309-27301526)
chr1 (276-361)||(42834741-42834826)
chr1 (267-355)||(6941238-6941326)
chr1 (300-359)||(47793188-47793247)
chr1 (300-362)||(6844326-6844388)
chr1 (300-359)||(33813427-33813486)
chr1 (300-359)||(33872897-33872956)
chr1 (133-247)||(8697792-8697906)
chr1 (270-352)||(43114633-43114715)
chr1 (267-361)||(45296890-45296984)
chr1 (300-362)||(47795799-47795861)
chr1 (300-361)||(47795739-47795800)
chr1 (267-356)||(47796610-47796699)
chr1 (300-364)||(33674841-33674905)
chr1 (300-356)||(47794760-47794816)
chr1 (276-352)||(49480368-49480444)
chr1 (300-363)||(6614426-6614489)
chr1 (300-359)||(33240946-33241005)
chr1 (267-337)||(7561990-7562060)
chr1 (300-358)||(10338324-10338382)
chr1 (298-362)||(39842657-39842720)
chr1 (300-355)||(24686060-24686115)
chr1 (300-359)||(43326123-43326182)
chr1 (300-354)||(11981584-11981638)
chr1 (300-346)||(42429472-42429518)
chr1 (300-362)||(49243644-49243706)
chr1 (300-352)||(47795660-47795712)
chr1 (304-359)||(10065974-10066029)
chr1 (323-362)||(12016765-12016804)
chr1 (276-347)||(26271825-26271896)
chr1 (267-352)||(15843985-15844071)
chr1 (267-352)||(15848724-15848810)
chr1 (300-358)||(43115124-43115182)
chr1 (267-309)||(47793252-47793294)
chr1 (300-353)||(45807859-45807912)
chr1 (304-352)||(11335820-11335868)
chr1 (304-352)||(11493839-11493887)
chr1 (300-355)||(52404341-52404397)
chr1 (302-356)||(47795602-47795655)
chr1 (267-352)||(15597621-15597706)
chr1 (206-250)||(20573702-20573746)
chr1 (300-339)||(6318792-6318831)
chr1 (300-354)||(6319186-6319240)
chr1 (300-341)||(17054112-17054152)
chr1 (133-242)||(18389022-18389131)
[»] chr7 (47 HSPs)
chr7 (35-253)||(41678310-41678528)
chr7 (47-253)||(43942267-43942472)
chr7 (35-222)||(17364171-17364358)
chr7 (534-784)||(6666307-6666558)
chr7 (99-252)||(25806514-25806667)
chr7 (276-355)||(35223671-35223750)
chr7 (267-352)||(30122037-30122122)
chr7 (267-359)||(10282600-10282692)
chr7 (276-361)||(24162303-24162388)
chr7 (300-359)||(22644696-22644755)
chr7 (300-359)||(47222674-47222733)
chr7 (300-361)||(24689205-24689266)
chr7 (300-355)||(1644405-1644460)
chr7 (300-359)||(4399527-4399586)
chr7 (300-359)||(29102544-29102603)
chr7 (267-360)||(11485835-11485929)
chr7 (133-243)||(22708092-22708202)
chr7 (267-357)||(23640876-23640965)
chr7 (267-357)||(29854551-29854641)
chr7 (300-354)||(33858164-33858218)
chr7 (300-357)||(15640419-15640476)
chr7 (277-341)||(38319868-38319932)
chr7 (300-361)||(15641159-15641220)
chr7 (661-734)||(25128521-25128594)
chr7 (267-351)||(4594626-4594710)
chr7 (206-250)||(17513319-17513363)
chr7 (206-250)||(17539851-17539895)
chr7 (300-360)||(28974808-28974868)
chr7 (304-364)||(30122247-30122307)
chr7 (300-362)||(44434849-44434911)
chr7 (300-361)||(15640233-15640294)
chr7 (276-353)||(31277315-31277392)
chr7 (300-352)||(1644771-1644823)
chr7 (300-360)||(26151339-26151399)
chr7 (300-351)||(26970594-26970646)
chr7 (300-352)||(35526354-35526405)
chr7 (300-362)||(23809100-23809162)
chr7 (300-350)||(32988467-32988517)
chr7 (325-362)||(35406955-35406992)
chr7 (309-361)||(15641659-15641711)
chr7 (300-347)||(19611022-19611068)
chr7 (542-597)||(25128669-25128724)
chr7 (300-354)||(35526780-35526835)
chr7 (311-353)||(1067210-1067252)
chr7 (300-342)||(10282846-10282888)
chr7 (300-342)||(45447745-45447787)
chr7 (300-361)||(26178195-26178256)
[»] chr4 (38 HSPs)
chr4 (267-359)||(660459-660551)
chr4 (267-353)||(13222070-13222156)
chr4 (300-361)||(7239057-7239118)
chr4 (267-351)||(42816095-42816179)
chr4 (300-358)||(54175704-54175762)
chr4 (267-364)||(41103876-41103973)
chr4 (133-247)||(5879011-5879125)
chr4 (296-354)||(7070641-7070699)
chr4 (300-354)||(9518896-9518950)
chr4 (291-356)||(24739210-24739275)
chr4 (278-354)||(16435941-16436017)
chr4 (300-354)||(12928423-12928477)
chr4 (304-365)||(49866967-49867028)
chr4 (300-360)||(19298684-19298744)
chr4 (276-343)||(50715573-50715640)
chr4 (267-341)||(11125146-11125220)
chr4 (300-354)||(27839130-27839184)
chr4 (282-352)||(29100711-29100781)
chr4 (267-352)||(46255091-46255174)
chr4 (300-361)||(36638741-36638802)
chr4 (300-357)||(41692303-41692360)
chr4 (300-352)||(16877054-16877106)
chr4 (300-352)||(39136199-39136251)
chr4 (267-352)||(42881922-42882009)
chr4 (304-355)||(43495697-43495748)
chr4 (267-353)||(44886060-44886146)
chr4 (267-309)||(45032324-45032366)
chr4 (300-354)||(45032371-45032425)
chr4 (300-362)||(54807014-54807076)
chr4 (300-352)||(5029141-5029193)
chr4 (307-351)||(53140136-53140180)
chr4 (300-355)||(32500133-32500188)
chr4 (306-352)||(660043-660089)
chr4 (309-359)||(2494254-2494304)
chr4 (317-353)||(42746933-42746969)
chr4 (300-362)||(49897520-49897580)
chr4 (300-357)||(27271673-27271731)
chr4 (267-351)||(56435493-56435578)
[»] scaffold0224 (1 HSPs)
scaffold0224 (276-361)||(21822-21907)
[»] chr3 (37 HSPs)
chr3 (278-359)||(54142882-54142963)
chr3 (664-841)||(26777943-26778119)
chr3 (300-359)||(23027642-23027701)
chr3 (300-359)||(26863187-26863246)
chr3 (611-841)||(26778752-26778983)
chr3 (611-841)||(26780777-26781008)
chr3 (300-355)||(7433760-7433815)
chr3 (300-359)||(21388580-21388639)
chr3 (300-359)||(40285202-40285261)
chr3 (300-359)||(54356136-54356195)
chr3 (300-357)||(34795200-34795257)
chr3 (300-352)||(11632938-11632990)
chr3 (306-354)||(12100935-12100983)
chr3 (295-359)||(44077905-44077969)
chr3 (300-365)||(10332962-10333028)
chr3 (304-362)||(16106190-16106248)
chr3 (300-361)||(3942735-3942796)
chr3 (300-353)||(44869122-44869175)
chr3 (300-360)||(10296964-10297024)
chr3 (709-776)||(22819047-22819114)
chr3 (307-358)||(24485762-24485813)
chr3 (267-342)||(54981719-54981794)
chr3 (267-309)||(23027706-23027748)
chr3 (267-309)||(44869075-44869117)
chr3 (133-245)||(2693260-2693372)
chr3 (300-360)||(8707885-8707945)
chr3 (300-360)||(9059772-9059832)
chr3 (300-356)||(10332871-10332927)
chr3 (300-340)||(26168048-26168088)
chr3 (306-362)||(33832692-33832748)
chr3 (300-359)||(21459479-21459538)
chr3 (300-354)||(45585966-45586020)
chr3 (300-360)||(10309600-10309660)
chr3 (309-356)||(46514878-46514925)
chr3 (300-358)||(25250466-25250524)
chr3 (476-597)||(22803496-22803617)
chr3 (267-352)||(27245911-27245996)
[»] scaffold0074 (1 HSPs)
scaffold0074 (133-247)||(20465-20579)
[»] scaffold0028 (1 HSPs)
scaffold0028 (133-247)||(18085-18199)
[»] scaffold0016 (2 HSPs)
scaffold0016 (267-356)||(106191-106279)
scaffold0016 (308-352)||(205121-205165)
[»] scaffold0006 (1 HSPs)
scaffold0006 (300-353)||(71534-71587)


Alignment Details
Target: chr5 (Bit Score: 207; Significance: 1e-113; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 35 - 253
Target Start/End: Original strand, 41309890 - 41310108
Alignment:
Q  35 tatgtaaataacggcgtttgaaactgccgctatatacaattaaataaccgccactttaaaccaagtatataacggcggacaacatggcggctacgtaaaa 134  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41309890 tatgtaaataatggcgtttgaaactgccgctatatacaattaaataaccgccactttaaaccaagtatataacggcggacaacatggcggctacgtaaaa 41309989  T
Q  135 actgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcatagtggcggctaaaaccgccggaatatacatttttt 234  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41309990 actgccgctttaaacattgtggcaggcgaaatttcggcagttcttgaaacggcagaattgtgcatagtggcggctaaaaccgccggaatatacatttttt 41310089  T
Q  235 agccgccggaaaacacgcg 253  Q
    |||||||||||||||||||    
T  41310090 agccgccggaaaacacgcg 41310108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 35 - 253
Target Start/End: Original strand, 19546048 - 19546265
Alignment:
Q  35 tatgtaaataacggcgtttgaaactgccgctatatacaattaaataaccgccactttaaaccaagtatataacggcggacaacatggcggctacgtaaaa 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19546048 tatgtaaataacggcgtttgaaactgccgctatatacaattaaataaccgccactttaaaccaagtatataacggcggacaacatggcggctacgtaaaa 19546147  T
Q  135 actgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcatagtggcggctaaaaccgccggaatatacatttttt 234  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  19546148 actgccgctttaaacattgtgccaggcgaaatttcggcagtttttgaaacgccagaattgtgcatagtggcggct-aaactgccggaatatacatttttt 19546246  T
Q  235 agccgccggaaaacacgcg 253  Q
    |||| ||||||||||||||    
T  19546247 agccaccggaaaacacgcg 19546265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 179; E-Value: 4e-96
Query Start/End: Original strand, 35 - 253
Target Start/End: Original strand, 25073621 - 25073839
Alignment:
Q  35 tatgtaaataacggcgtttgaaactgccgctatatacaattaaataaccgccactttaaaccaagtatataacggcggacaacatggcggctacgtaaaa 134  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||| |||||||    
T  25073621 tatgtaaataatggcgtttgaaactgccgctatatacaattaaataacagccactttaagccaagtataaaacggcggacaacatggcggcttcgtaaaa 25073720  T
Q  135 actgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcatagtggcggctaaaaccgccggaatatacatttttt 234  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  25073721 actgccgctttaaacattgtggcaggcaaaatttcggcagtttttaaaacgccagaattgtgcatagtggcggctaaaaccgccgaaacatacatttttt 25073820  T
Q  235 agccgccggaaaacacgcg 253  Q
    ||| |||||||||||||||    
T  25073821 agctgccggaaaacacgcg 25073839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 179; E-Value: 4e-96
Query Start/End: Original strand, 35 - 253
Target Start/End: Original strand, 25131592 - 25131810
Alignment:
Q  35 tatgtaaataacggcgtttgaaactgccgctatatacaattaaataaccgccactttaaaccaagtatataacggcggacaacatggcggctacgtaaaa 134  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||| |||||||    
T  25131592 tatgtaaataatggcgtttgaaactgccgctatatacaattaaataacagccactttaagccaagtataaaacggcggacaacatggcggcttcgtaaaa 25131691  T
Q  135 actgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcatagtggcggctaaaaccgccggaatatacatttttt 234  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  25131692 actgccgctttaaacattgtggcaggcaaaatttcggcagtttttaaaacgccagaattgtgcatagtggcggctaaaaccgccgaaacatacatttttt 25131791  T
Q  235 agccgccggaaaacacgcg 253  Q
    ||| |||||||||||||||    
T  25131792 agctgccggaaaacacgcg 25131810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 35 - 253
Target Start/End: Original strand, 40690775 - 40690993
Alignment:
Q  35 tatgtaaataacggcgtttgaaactgccgctatatacaattaaataaccgccactttaaaccaagtatataacggcggacaacatggcggctacgtaaaa 134  Q
    ||||||||||| ||| ||||||||| |||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  40690775 tatgtaaataatggcatttgaaacttccgctacatacaattaagtaaccgccactttaagccaagtatataacggcggacaacatggcggctacgtaaaa 40690874  T
Q  135 actgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcatagtggcggctaaaaccgccggaatatacatttttt 234  Q
    | | | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  40690875 attcctgctttaaacattgtggcaggcgaaatttcggcagtttttaaaacgccagaattgtgcatagtggcggctaaaaccgccagaacatacatttttt 40690974  T
Q  235 agccgccggaaaacacgcg 253  Q
    |||||||||||||||||||    
T  40690975 agccgccggaaaacacgcg 40690993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 35 - 253
Target Start/End: Original strand, 26701231 - 26701448
Alignment:
Q  35 tatgtaaataacggcgtttgaaactgccgctatatacaattaaataaccgccactttaaaccaagtatataacggcggacaacatggcggctacgtaaaa 134  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| | ||||||| ||||||||||||||| ||||||||||||||    
T  26701231 tatgtaaataatggcgtttgaaactgccactatatacaattaaataaccgccactttaagc-aagtataaaacggcggacaacattgcggctacgtaaaa 26701329  T
Q  135 actgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcatagtggcggctaaaaccgccggaatatacatttttt 234  Q
    ||||||||||| ||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  26701330 actgccgcttttaacattgtggcagacaaaatttcggcagtttttaaaacgccagaattgtgcatagtggcggctaaaaccgccggaacatacatttttt 26701429  T
Q  235 agccgccggaaaacacgcg 253  Q
    |||| ||||||||||||||    
T  26701430 agccaccggaaaacacgcg 26701448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 35 - 253
Target Start/End: Original strand, 26970964 - 26971181
Alignment:
Q  35 tatgtaaataacggcgtttgaaactgccgctatatacaattaaataaccgccactttaaaccaagtatataacggcggacaacatggcggctacgtaaaa 134  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| | ||||||| ||||||||||||||| ||||||||||||||    
T  26970964 tatgtaaataatggcgtttgaaactgccactatatacaattaaataaccgccactttaagc-aagtataaaacggcggacaacattgcggctacgtaaaa 26971062  T
Q  135 actgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcatagtggcggctaaaaccgccggaatatacatttttt 234  Q
    ||||||||||| ||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  26971063 actgccgcttttaacattgtggcagacaaaatttcggcagtttttaaaacgccagaattgtgcatagtggcggctaaaaccgccggaacatacatttttt 26971162  T
Q  235 agccgccggaaaacacgcg 253  Q
    |||| ||||||||||||||    
T  26971163 agccaccggaaaacacgcg 26971181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 549 - 841
Target Start/End: Original strand, 17081056 - 17081352
Alignment:
Q  549 tatggagacattgctttcgtatcattgtttgaccggtattcgtttgttttagannnnnnnnc--ttcgtattttagtttcttctgatgtcactaacgcgt 646  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||||||| | |           ||||||||||| |||||||| ||||  |||||| |     
T  17081056 tatggagacattgttttcgtatcattgattgaccgttattcgtttgtttcatattttattttatttcgtattttaatttcttctaatgttgctaacgtgc 17081155  T
Q  647 agccatatttgt--tctttatgcattaacacctctggatccgcatccggtaactgagttggacaaggtggtaaacaaactaaggatcaaacataaagcat 744  Q
    | || ||| |||  | |||||| |||||||| ||| |||| ||||||  ||| ||| ||||||||||||||||||||||||| ||||||| ||| | |||    
T  17081156 aaccttatctgttgtttttatgtattaacacatctagatctgcatccaataattgatttggacaaggtggtaaacaaactaacgatcaaatatagaacat 17081255  T
Q  745 actatgtagagtttgatgcacaccatgcgagagtatatgctttgtatataaaattttacgtacacnatgatgcacatatttgtatatctcttttcaa 841  Q
    ||||  | ||||||||| ||||||||| ||||||||||||||||||| | ||||| | ||| ||  |||||||||||| ||||||||||||||||||    
T  17081256 actacatggagtttgatacacaccatgtgagagtatatgctttgtattttaaattattcgtccatcatgatgcacatacttgtatatctcttttcaa 17081352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 267 - 362
Target Start/End: Complemental strand, 35781342 - 35781247
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcccttaa 362  Q
    |||||||  |||||||||| | |||||| | | |||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||    
T  35781342 aacaaacgcaaaatagattttgatttttcataaaatctctaaattattttatgtcaaaatcacttttattttaatctgtaacaaacggacccttaa 35781247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 267 - 354
Target Start/End: Original strand, 35040526 - 35040613
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgg 354  Q
    |||||||  |||||||||||| |||||||| | |||| |||||||||||||||||  |||||| ||||||||||||||||||||||||    
T  35040526 aacaaacgcaaaatagattctgattttttataaaatcgctaaattattttatgtcacaatcacatttattttaatccgtaacaaacgg 35040613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 20515455 - 20515517
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcccttaa 362  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||    
T  20515455 aatctctaaattattttatgtcaaaatcacttttattttaatccgtaacaaacaggtccttaa 20515517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 38184218 - 38184156
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcccttaa 362  Q
    |||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||    
T  38184218 aatctctaaattattttatgtcaaaatcacttttattttatttcgtaacaaacgggcccttaa 38184156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 38214139 - 38214201
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcccttaa 362  Q
    |||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||    
T  38214139 aatctctaaattattttatgtcaaaatcacttttattttatttcgtaacaaacgggcccttaa 38214201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 300 - 361
Target Start/End: Original strand, 35041686 - 35041747
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctta 361  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||    
T  35041686 aatctctaaattatcttacgtcaaaatcacttttattttaatccgtaacaaacgggccctta 35041747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 300 - 353
Target Start/End: Original strand, 35781773 - 35781826
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacg 353  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  35781773 aatctctaaattattttatgtcaaaatcacttttattttaatccgtaacaaacg 35781826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 300 - 352
Target Start/End: Original strand, 2211399 - 2211451
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2211399 aatctctaaattattttatgtcaaaatcacttttattttaatccgtaacaaac 2211451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 300 - 358
Target Start/End: Complemental strand, 1349581 - 1349523
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccc 358  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||    
T  1349581 aatctctaaattattttatgtcaaaatcacttttattttaatctgtaacaaacgagccc 1349523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 709 - 799
Target Start/End: Original strand, 28789380 - 28789470
Alignment:
Q  709 aggtggtaaacaaactaaggatcaaacataaagcatactatgtagagtttgatgcacaccatgcgagagtatatgctttgtatataaaatt 799  Q
    |||||||||||| ||||||||||||| ||| | ||||||| || ||||||||||||||||||  ||||||||||||||  ||||| |||||    
T  28789380 aggtggtaaacacactaaggatcaaatatataacatactacgtggagtttgatgcacaccatatgagagtatatgcttcatatattaaatt 28789470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 40591237 - 40591180
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcc 357  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||    
T  40591237 aatctctaaattaatttatgtcaaaatcacttttattttaatccgtaacaaacaggcc 40591180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 300 - 352
Target Start/End: Complemental strand, 36197605 - 36197553
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  36197605 aatctctaaattattttatgtcaaaatcatttttattttaatccgtaacaaac 36197553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 267 - 358
Target Start/End: Original strand, 12546007 - 12546098
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccc 358  Q
    |||||||| |||||||||||| |||||| | | |||||||||||||||||||||  ||| || |||||||||||||| ||| |||| |||||    
T  12546007 aacaaacacaaaatagattctgatttttcatacaatctctaaattattttatgttaaaaacatttttattttaatccataataaacaggccc 12546098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 300 - 351
Target Start/End: Complemental strand, 34383306 - 34383255
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaa 351  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  34383306 aatctctaaattattttatgtcaaaatcacttttattttaatctgtaacaaa 34383255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 35041321 - 35041380
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccct 359  Q
    |||||||||||||||||||  | |||| ||||||||||||||||||||||||||||||||    
T  35041321 aatctctaaattattttattgcaaaattacttttattttaatccgtaacaaacgggccct 35041380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 35041931 - 35041978
Alignment:
Q  307 aaattattttatgtcgaaatcacttttattttaatccgtaacaaacgg 354  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  35041931 aaattattttatgtcaaaatcacttttattttaatccgtaacaaacgg 35041978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 300 - 354
Target Start/End: Complemental strand, 28793929 - 28793875
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgg 354  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||    
T  28793929 aatctctaaattatttgatgtcaaaatcacttttatgttaatccgtaacaaacgg 28793875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 30054635 - 30054693
Alignment:
Q  301 atctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccct 359  Q
    |||||||||||||||||| |  |||||||||||||||||||||||||||||||| ||||    
T  30054635 atctctaaattattttattttaaaatcacttttattttaatccgtaacaaacggaccct 30054693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 300 - 350
Target Start/End: Complemental strand, 35040911 - 35040861
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaa 350  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  35040911 aatctctaaattattttatgtcaaaatcacttttattttaatctgtaacaa 35040861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 366052 - 365940
Alignment:
Q  133 aaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcatagtggcggctaaaaccgccggaatatacatttt 232  Q
    ||||||||| |||| || ||||||||||  |||||| |||||||||  || ||||||  ||||  |||||||||||||||||||||| || |  || |||    
T  366052 aaactgccggtttatactttgtggcaggaaaaattttggcagttttgaaaccgccagttttgtttatagtggcggctaaaaccgccgcaacaagcaattt 365953  T
Q  233 ttagccgccggaa 245  Q
    |||||||||||||    
T  365952 ttagccgccggaa 365940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 267 - 353
Target Start/End: Complemental strand, 18585654 - 18585568
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacg 353  Q
    |||||||  |||||| ||| | |||||| | | ||||| |||||||||||||| | ||||||||||||||||||||| |||||||||    
T  18585654 aacaaacgcaaaataaatttttatttttgataaaatctataaattattttatgccaaaatcacttttattttaatccataacaaacg 18585568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 30054588 - 30054630
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaa 309  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  30054588 aacaaacataaaatagattctgattttttaaagaatctctaaa 30054630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 306 - 359
Target Start/End: Complemental strand, 5249271 - 5249218
Alignment:
Q  306 taaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccct 359  Q
    |||||||||||||||  |||||| |||||||||||||||||||||||| |||||    
T  5249271 taaattattttatgtaaaaatcaattttattttaatccgtaacaaacgagccct 5249218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 247
Target Start/End: Complemental strand, 34271542 - 34271461
Alignment:
Q  166 tttcggcagtttttgaaacgccagaattgtgcatagtggcggctaaaaccgccggaatatacattttttagccgccggaaaa 247  Q
    |||| ||||||||| ||| || ||||||||||||||| |||||||||||||  |||| |||||  ||||||||| |||||||    
T  34271542 tttcagcagtttttaaaatgcgagaattgtgcatagtagcggctaaaaccgttggaacatacaaattttagccgacggaaaa 34271461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 265 - 352
Target Start/End: Complemental strand, 25095828 - 25095740
Alignment:
Q  265 ttaacaaacataaaatagattctaattttttaa-agaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    ||||||||||| |||||||||||||||| | || | |||||||| ||| ||||||||| | |||| ||||||| |||| ||||||||||    
T  25095828 ttaacaaacatgaaatagattctaatttgtcaataaaatctctatatttttttatgtcaagatcatttttattctaattcgtaacaaac 25095740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 265 - 352
Target Start/End: Complemental strand, 25153798 - 25153710
Alignment:
Q  265 ttaacaaacataaaatagattctaattttttaa-agaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    ||||||||||| |||||||||||||||| | || | |||||||| ||| ||||||||| | |||| ||||||| |||| ||||||||||    
T  25153798 ttaacaaacatgaaatagattctaatttgtcaataaaatctctatatttttttatgtcaagatcatttttattctaattcgtaacaaac 25153710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 300 - 351
Target Start/End: Original strand, 6538198 - 6538249
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaa 351  Q
    ||||||||||||||||| | |||||  |||||||||||||||||||||||||    
T  6538198 aatctctaaattattttgtatcgaagccacttttattttaatccgtaacaaa 6538249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 267 - 353
Target Start/End: Complemental strand, 17342456 - 17342369
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaattatttt-atgtcgaaatcacttttattttaatccgtaacaaacg 353  Q
    |||||||| |||||| ||||| |||| | | | ||||||||||||||||| ||  | ||||||||||||||||||||||||| |||||    
T  17342456 aacaaacacaaaataaattctgatttgtcataaaatctctaaattatttttatagcaaaatcacttttattttaatccgtaataaacg 17342369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 300 - 355
Target Start/End: Complemental strand, 25458384 - 25458329
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacggg 355  Q
    |||||||||||||||||||||| |||| | |||||||||||| | |||||||||||    
T  25458384 aatctctaaattattttatgtcaaaattatttttattttaattcataacaaacggg 25458329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 303 - 345
Target Start/End: Original strand, 4728026 - 4728068
Alignment:
Q  303 ctctaaattattttatgtcgaaatcacttttattttaatccgt 345  Q
    |||||||||||||||| || |||||||||||||||||||||||    
T  4728026 ctctaaattattttatatcaaaatcacttttattttaatccgt 4728068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 354
Target Start/End: Original strand, 35041467 - 35041521
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgg 354  Q
    |||||||||||||||||||| | |||||| ||||||||||||  |||||||||||    
T  35041467 aatctctaaattattttatggcaaaatcatttttattttaatttgtaacaaacgg 35041521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 38494420 - 38494358
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcccttaa 362  Q
    ||||| |||||| ||| ||||| |||||||||||||| |||||| |||||||||| |||||||    
T  38494420 aatctttaaattttttaatgtcaaaatcacttttattctaatccataacaaacggacccttaa 38494358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 217
Target Start/End: Original strand, 23309897 - 23309981
Alignment:
Q  133 aaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcatagtggcggctaaaaccgc 217  Q
    ||||||||  ||||||| ||| ||||||| ||||| || |||||||  ||||||| |||| ||  ||||||||||||||||||||    
T  23309897 aaactgccattttaaactttgcggcaggcaaaattacgacagttttgaaaacgcctgaatggtttatagtggcggctaaaaccgc 23309981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 300 - 343
Target Start/End: Complemental strand, 5246441 - 5246398
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatcc 343  Q
    |||||||||||||||||||||| |||| | ||||||||||||||    
T  5246441 aatctctaaattattttatgtcaaaattatttttattttaatcc 5246398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 300 - 339
Target Start/End: Complemental strand, 19134684 - 19134645
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttatttta 339  Q
    |||||||||||||||||||||  |||||||||||||||||    
T  19134684 aatctctaaattattttatgtgaaaatcacttttatttta 19134645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 300 - 350
Target Start/End: Original strand, 6429657 - 6429707
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaa 350  Q
    |||||||||||||||||||||  |||||| ||||||||||||  |||||||    
T  6429657 aatctctaaattattttatgtgaaaatcatttttattttaatttgtaacaa 6429707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 267 - 352
Target Start/End: Complemental strand, 25098605 - 25098519
Alignment:
Q  267 aacaaacataaaatagattctaattttttaa-agaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    ||||||||| |||||||||||||||| | || | |||||||| ||| ||||||||| | |||| ||||||| |||| ||| ||||||    
T  25098605 aacaaacatgaaatagattctaatttgtcaataaaatctctatatttttttatgtcaagatcatttttattctaattcgtgacaaac 25098519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 267 - 352
Target Start/End: Complemental strand, 25157696 - 25157610
Alignment:
Q  267 aacaaacataaaatagattctaattttttaa-agaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    ||||||||| |||||||||||||||| | || | |||||||| ||| ||||||||| | |||| ||||||| |||| ||| ||||||    
T  25157696 aacaaacatgaaatagattctaatttgtcaataaaatctctatatttttttatgtcaagatcatttttattctaattcgtgacaaac 25157610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 300 - 346
Target Start/End: Original strand, 27124266 - 27124312
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgta 346  Q
    |||||||||||||||  ||||  ||||||||||||||||||||||||    
T  27124266 aatctctaaattattaaatgttaaaatcacttttattttaatccgta 27124312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 203; Significance: 1e-110; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 35 - 253
Target Start/End: Original strand, 26223655 - 26223873
Alignment:
Q  35 tatgtaaataacggcgtttgaaactgccgctatatacaattaaataaccgccactttaaaccaagtatataacggcggacaacatggcggctacgtaaaa 134  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26223655 tatgtaaataatggcgtttgaaactgccgctatatacaattaaataaccgccactttaaaccaagtatataacggcggacaacatggtggctacgtaaaa 26223754  T
Q  135 actgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcatagtggcggctaaaaccgccggaatatacatttttt 234  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26223755 actgccgctttaaacattgtggcaggcgaaatttcggcagttcttgaaacgtcagaattgtgcatagtggcggctaaaaccgccggaatatacatttttt 26223854  T
Q  235 agccgccggaaaacacgcg 253  Q
    |||||||||||||||||||    
T  26223855 agccgccggaaaacacgcg 26223873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 267 - 353
Target Start/End: Complemental strand, 21479181 - 21479095
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacg 353  Q
    |||||||| ||||||||||||||||||| | | |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21479181 aacaaacacaaaatagattctaatttttcataaaatctctaaattattttatgtcaaaatcacttttattttaatccgtaacaaacg 21479095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 264 - 352
Target Start/End: Complemental strand, 7495562 - 7495474
Alignment:
Q  264 gttaacaaacataaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    |||||||||| | ||||||||||| |||||||| | ||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7495562 gttaacaaacgttaaatagattctgattttttataaaatatctaaattattttatgtcaaaatcacttttattttaatccgtaacaaac 7495474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 267 - 358
Target Start/End: Original strand, 43968678 - 43968769
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccc 358  Q
    |||||||  |||||||||||| |||||||| | |||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||    
T  43968678 aacaaacgcaaaatagattctgattttttacaaaatctctaaattattttatgtgaaaatcacttttattttaatccgtagcaaacgggccc 43968769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 661 - 841
Target Start/End: Original strand, 28968983 - 28969163
Alignment:
Q  661 tttatgcattaacacctctggatccgcatccggtaactgagttggacaaggtggtaaacaaactaaggatcaaacataaagcatactatgtagagtttga 760  Q
    ||||||||||| ||||||| |||||| || |||||||||| ||||||||| || || | ||| ||||||||||| ||  | ||||||| || ||||||||    
T  28968983 tttatgcattatcacctctagatccggattcggtaactgatttggacaagttgatataaaaattaaggatcaaatattgaacatactacgtggagtttga 28969082  T
Q  761 tgcacaccatgcgagagtatatgctttgtatataaaattttacgtacacnatgatgcacatatttgtatatctcttttcaa 841  Q
    |||  |||||| |||| |||||||||||||| |   | | | | |  || |||||||||||||||||||||||||||||||    
T  28969083 tgcggaccatgtgagattatatgctttgtattttttactatccatcaacaatgatgcacatatttgtatatctcttttcaa 28969163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 267 - 356
Target Start/End: Original strand, 40662868 - 40662957
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggc 356  Q
    |||||||| |||||||||||| |||||| | | |||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||    
T  40662868 aacaaacacaaaatagattctgatttttcataaaatctctaaactattttatgtcaaaatcacttttattctaatccgtaacaaacgggc 40662957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 267 - 361
Target Start/End: Original strand, 41347421 - 41347515
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctta 361  Q
    |||||||  |||||||||||| |||||| | | |||||||||||||||| ||||| |||| |||||||||||||||||||||||||| |||||||    
T  41347421 aacaaacgcaaaatagattctgatttttcatataatctctaaattatttaatgtcaaaatgacttttattttaatccgtaacaaacgagccctta 41347515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 300 - 361
Target Start/End: Complemental strand, 31667439 - 31667378
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctta 361  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  31667439 aatctctaaattattttatgtcgaaatcacttttattttaatccttaacaaacggaccctta 31667378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 24545797 - 24545856
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccct 359  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  24545797 aatctctaaattattttatgtcaaaatcacttttattttaatccgtaacaaacgagccct 24545856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 280 - 361
Target Start/End: Complemental strand, 30666274 - 30666193
Alignment:
Q  280 tagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctta 361  Q
    |||||||| |||||| ||| |||||||||||||||||||||  |||||||||||||||||||| |||||||| |||| ||||    
T  30666274 tagattctgatttttcaaaaaatctctaaattattttatgtgaaaatcacttttattttaatctgtaacaaaggggcactta 30666193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 280 - 361
Target Start/End: Complemental strand, 30668857 - 30668776
Alignment:
Q  280 tagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctta 361  Q
    |||||||| |||||| | | |||||||||||||||||||||  ||||||||||||||||||||||||| |||||| ||||||    
T  30668857 tagattcttatttttcacaaaatctctaaattattttatgtgaaaatcacttttattttaatccgtaaaaaacggaccctta 30668776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 278 - 354
Target Start/End: Original strand, 39844340 - 39844416
Alignment:
Q  278 aatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgg 354  Q
    |||||||||| ||| |||| | |||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||    
T  39844340 aatagattcttattatttataaaatctctaaattattttatgtcaaaaccacttatattttaatccgtaacaaacgg 39844416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 37201578 - 37201517
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcccttaa 362  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||    
T  37201578 aatctctaaattattttatgtcaaaatcactttta-tttaatccgtaaaaaacgggcccttaa 37201517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 43004839 - 43004777
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcccttaa 362  Q
    |||||||||||||||||||||| |||||||||||||||||||||| || |||||||| |||||    
T  43004839 aatctctaaattattttatgtcaaaatcacttttattttaatccgcaataaacgggctcttaa 43004777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 14787127 - 14787070
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcc 357  Q
    |||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||    
T  14787127 aatctctaaattattttatgtcaaaatcacttttattttaattagtaacaaacgggcc 14787070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 21479333 - 21479276
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcc 357  Q
    ||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||    
T  21479333 aatctctaaattattttatgtcagaatcaattttattttaatccgtaacaaacgggcc 21479276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 300 - 352
Target Start/End: Original strand, 34454050 - 34454102
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  34454050 aatctctaaattattttatgttaaaatcacttttattttaatccgtaacaaac 34454102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 307 - 357
Target Start/End: Original strand, 40662982 - 40663032
Alignment:
Q  307 aaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcc 357  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  40662982 aaattattttatgtcaaaatcacttttattctaatccgtaacaaacgggcc 40663032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 304 - 361
Target Start/End: Complemental strand, 11667126 - 11667069
Alignment:
Q  304 tctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctta 361  Q
    |||||||||||||||| | ||||||||||||||||||| |||||||||||| ||||||    
T  11667126 tctaaattattttatgacaaaatcacttttattttaattcgtaacaaacggaccctta 11667069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 300 - 353
Target Start/End: Original strand, 36950496 - 36950549
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacg 353  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||| ||||    
T  36950496 aatctctaaattattttatgtcaaaatcacttttattttaatctgtaactaacg 36950549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 41145070 - 41145017
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaattattttatgt 320  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||| |||||    
T  41145070 aacaaacataatatagattctgattttttaaagaatctctaaattattgtatgt 41145017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 302 - 354
Target Start/End: Original strand, 645370 - 645422
Alignment:
Q  302 tctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgg 354  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||| ||||||    
T  645370 tctctaaattattttatgtcaaaatcacttttattttaatccataataaacgg 645422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 267 - 359
Target Start/End: Original strand, 7075010 - 7075102
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccct 359  Q
    |||||||  |||||| ||| |||||||| | | |||||||||||||||||||| | |||||| |||||||||||||| ||| ||||| |||||    
T  7075010 aacaaactcaaaataaattataatttttcataaaatctctaaattattttatgccaaaatcatttttattttaatccataataaacgagccct 7075102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 300 - 356
Target Start/End: Complemental strand, 15458872 - 15458816
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggc 356  Q
    |||||||||||||||| ||||| ||||||||||||||||||||  ||||||||||||    
T  15458872 aatctctaaattatttaatgtcaaaatcacttttattttaatctataacaaacgggc 15458816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 9420177 - 9420130
Alignment:
Q  307 aaattattttatgtcgaaatcacttttattttaatccgtaacaaacgg 354  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  9420177 aaattatttaatgtcaaaatcacttttattttaatccgtaacaaacgg 9420130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 300 - 351
Target Start/End: Original strand, 43968344 - 43968394
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaa 351  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  43968344 aatctctaaattattttatgtcaaaat-acttttattttaatccgtaacaaa 43968394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 300 - 361
Target Start/End: Complemental strand, 30620532 - 30620471
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctta 361  Q
    |||||||||||||||||||||  ||||||| |||||||||||| ||||||||| | ||||||    
T  30620532 aatctctaaattattttatgtgaaaatcacatttattttaatctgtaacaaactgaccctta 30620471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 300 - 361
Target Start/End: Complemental strand, 30623153 - 30623092
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctta 361  Q
    |||||||||||||||||||||  ||||||| |||||||||||| ||||||||| | ||||||    
T  30623153 aatctctaaattattttatgtgaaaatcacatttattttaatctgtaacaaactgaccctta 30623092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 300 - 353
Target Start/End: Complemental strand, 38722778 - 38722725
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacg 353  Q
    ||||||||||||||||||| || |||||| |||||||||||||||||| |||||    
T  38722778 aatctctaaattattttatatcaaaatcatttttattttaatccgtaataaacg 38722725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 300 - 351
Target Start/End: Complemental strand, 42676392 - 42676341
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaa 351  Q
    |||||||||||| ||||||||| ||||||||||||||||| || ||||||||    
T  42676392 aatctctaaattcttttatgtcaaaatcacttttattttattctgtaacaaa 42676341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 342
Target Start/End: Original strand, 44833304 - 44833346
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatc 342  Q
    |||||||||||||||| ||||| ||||||||||||||||||||    
T  44833304 aatctctaaattatttcatgtcaaaatcacttttattttaatc 44833346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 300 - 352
Target Start/End: Complemental strand, 9977846 - 9977794
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    |||||||||||||||| | ||| |||||||||||||||||||| | |||||||    
T  9977846 aatctctaaattatttaacgtcaaaatcacttttattttaatctgcaacaaac 9977794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 300 - 352
Target Start/End: Original strand, 27719811 - 27719863
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    ||||| |||||||||| ||||| || |||||||||||||||||||| ||||||    
T  27719811 aatctttaaattatttaatgtcaaattcacttttattttaatccgtgacaaac 27719863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 40031452 - 40031340
Alignment:
Q  133 aaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcatagtggcggctaaaaccgccggaatatacatttt 232  Q
    ||||||||| ||||||| ||||||||||  ||||||||||||||||  || |||||   ||||  ||||||||||||||| || ||  || |  || |||    
T  40031452 aaactgccggtttaaactttgtggcaggaaaaatttcggcagttttaaaaccgccaattttgtttatagtggcggctaaagccaccacaacaagcaattt 40031353  T
Q  233 ttagccgccggaa 245  Q
    |||||||||||||    
T  40031352 ttagccgccggaa 40031340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 307 - 355
Target Start/End: Original strand, 40663055 - 40663102
Alignment:
Q  307 aaattattttatgtcgaaatcacttttattttaatccgtaacaaacggg 355  Q
    ||||||||| ||||| |||||||||||||||| ||||||||||||||||    
T  40663055 aaattatttaatgtcaaaatcacttttatttt-atccgtaacaaacggg 40663102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 253
Target Start/End: Complemental strand, 15861931 - 15861863
Alignment:
Q  183 acgccagaattgtgcatagtggcggctaaaaccgccggaatatacattttttagccgccggaaaacacgcg 253  Q
    ||||||||||| ||||  ||| |||||||||||||||||| ||||||||||||| || |  ||||||||||    
T  15861931 acgccagaattatgca--gtgtcggctaaaaccgccggaacatacattttttagtcgtcaaaaaacacgcg 15861863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 302 - 352
Target Start/End: Complemental strand, 34453677 - 34453627
Alignment:
Q  302 tctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    |||||||||||||||||    ||||||||||||||||||| ||||||||||    
T  34453677 tctctaaattattttataataaaatcacttttattttaatacgtaacaaac 34453627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 323 - 352
Target Start/End: Original strand, 932768 - 932797
Alignment:
Q  323 aaatcacttttattttaatccgtaacaaac 352  Q
    ||||||||||||||||||||||||||||||    
T  932768 aaatcacttttattttaatccgtaacaaac 932797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 290 - 355
Target Start/End: Original strand, 7618714 - 7618779
Alignment:
Q  290 ttttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacggg 355  Q
    ||||||||| |||||||||||||||  || || |||||| |||| || |||||||| |||||||||    
T  7618714 ttttttaaaaaatctctaaattattgaatatcaaaatcaatttttttataatccgttacaaacggg 7618779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 183; Significance: 2e-98; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 183; E-Value: 2e-98
Query Start/End: Original strand, 35 - 253
Target Start/End: Complemental strand, 24497877 - 24497659
Alignment:
Q  35 tatgtaaataacggcgtttgaaactgccgctatatacaattaaataaccgccactttaaaccaagtatataacggcggacaacatggcggctacgtaaaa 134  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  24497877 tatgtaattaatggcgtttgaaactgccgctatatacaattaaataaccgtcactttaagccaagtataaaacggcggacaacatggcggctacgtaaaa 24497778  T
Q  135 actgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcatagtggcggctaaaaccgccggaatatacatttttt 234  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24497777 actgccgctttaaacattgtggcaggcaaaatttcggcagtttttaaaacgccagaattgtgcatagtggcggctaaaaccgccggaacatacatttttt 24497678  T
Q  235 agccgccggaaaacacgcg 253  Q
    |||||||| ||||||||||    
T  24497677 agccgccgaaaaacacgcg 24497659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 9290057 - 9290117
Alignment:
Q  193 tgtgcatagtggcggctaaaaccgccggaatatacattttttagccgccggaaaacacgcg 253  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9290057 tgtgcatagtggcggctaaaaccgccggaacatacattttttagccgccggaaaacacgcg 9290117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 50 - 220
Target Start/End: Complemental strand, 12313629 - 12313459
Alignment:
Q  50 gtttgaaactgccgctatatacaattaaataaccgccactttaaaccaagtatataacggcggacaacatggcggctacgtaaaaactgccgctttaaac 149  Q
    |||||||||||| | | || ||| ||||| |||| | ||||||||| | || || |||||  || | ||||| |||| | |||||||| ||| |||||||    
T  12313629 gtttgaaactgctgttttaaacatttaaaaaaccactactttaaactaggtgtaaaacggtagataccatgggggctgcctaaaaactaccgatttaaac 12313530  T
Q  150 attgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcatagtggcggctaaaaccgccgg 220  Q
     |||||| || | ||||||||||| |||||||||||||| ||||||||||| || ||||||||||||||||    
T  12313529 tttgtggtagacaaaatttcggcaatttttgaaacgccaaaattgtgcatactgacggctaaaaccgccgg 12313459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 300 - 355
Target Start/End: Original strand, 7204971 - 7205026
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacggg 355  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7204971 aatctctaaattattttatgtcaaaatcacttttattttaatccgtaacaaacggg 7205026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 26001411 - 26001473
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcccttaa 362  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||| | |||||||    
T  26001411 aatctctaaattattttatgtcaaaatcacttttattttaatctgtaacaaacagacccttaa 26001473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 300 - 363
Target Start/End: Original strand, 14094221 - 14094284
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcccttaaa 363  Q
    |||||||||||||||||||||| |||||||||||||||||||||| || ||| || ||||||||    
T  14094221 aatctctaaattattttatgtcaaaatcacttttattttaatccgcaataaatggacccttaaa 14094284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 300 - 355
Target Start/End: Complemental strand, 24007096 - 24007041
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacggg 355  Q
    |||||||||||||||||||| | |||||| ||||||||||||||||||||||||||    
T  24007096 aatctctaaattattttatggccaaatcatttttattttaatccgtaacaaacggg 24007041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 300 - 360
Target Start/End: Complemental strand, 21980834 - 21980774
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctt 360  Q
    |||||||||||||||||||||| |||| |||| |||||||||| ||||||||||| |||||    
T  21980834 aatctctaaattattttatgtcaaaataacttatattttaatctgtaacaaacggcccctt 21980774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 308 - 358
Target Start/End: Original strand, 20469483 - 20469533
Alignment:
Q  308 aattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccc 358  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||| ||||    
T  20469483 aattattttatgtcaaaatcacttttattttaatccataacaaacgagccc 20469533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 276 - 342
Target Start/End: Complemental strand, 26209086 - 26209020
Alignment:
Q  276 aaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatc 342  Q
    |||||||||| |||||||| | | |||||||||| ||||||||||  ||||||||||||||||||||    
T  26209086 aaaatagattttaatttttcataaaatctctaaaatattttatgtgaaaatcacttttattttaatc 26209020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 358
Target Start/End: Complemental strand, 33438591 - 33438533
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccc 358  Q
    |||||| |||||||||| |||| ||||||||||||||||||||||| ||||||| ||||    
T  33438591 aatctcaaaattattttgtgtcaaaatcacttttattttaatccgtcacaaacgagccc 33438533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 306 - 355
Target Start/End: Original strand, 891149 - 891198
Alignment:
Q  306 taaattattttatgtcgaaatcacttttattttaatccgtaacaaacggg 355  Q
    |||||||||||||||  ||||||||||||||||||||||||||| |||||    
T  891149 taaattattttatgtgaaaatcacttttattttaatccgtaacagacggg 891198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 290 - 352
Target Start/End: Original strand, 10780311 - 10780373
Alignment:
Q  290 ttttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    ||||| ||| |||||||||| ||||||||||| |||| | |||||||||||||| ||||||||    
T  10780311 tttttcaaaaaatctctaaaatattttatgtcaaaattatttttattttaatccataacaaac 10780373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 216
Target Start/End: Complemental strand, 12068348 - 12068264
Alignment:
Q  133 aaactgccgctttaaacattgtggcaggcgaaatttcggcagtttt-tgaaacgccagaattgtgcatagtggcggctaaaaccg 216  Q
    ||||||||| ||||| | ||||||||||  |||||| ||||||||| |||| ||||||  | || ||||||||||||||||||||    
T  12068348 aaactgccgttttaatctttgtggcaggaaaaattttggcagttttgtgaaccgccagtttggtacatagtggcggctaaaaccg 12068264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 300 - 334
Target Start/End: Original strand, 2258867 - 2258901
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcactttta 334  Q
    |||||||||||||||||||||| ||||||||||||    
T  2258867 aatctctaaattattttatgtcaaaatcactttta 2258901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 171; Significance: 2e-91; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 35 - 253
Target Start/End: Complemental strand, 18558981 - 18558763
Alignment:
Q  35 tatgtaaataacggcgtttgaaactgccgctatatacaattaaataaccgccactttaaaccaagtatataacggcggacaacatggcggctacgtaaaa 134  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||| ||||||| |||||    
T  18558981 tatgtaaataatggcgtttgaaactgccgctatatacaattaaataaccgccactttaagccaagtataaaacggcggacaatatgacggctacataaaa 18558882  T
Q  135 actgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcatagtggcggctaaaaccgccggaatatacatttttt 234  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  18558881 actgccgttttaaacattgtggcaggcaaaatttcggcagtttttaaaacgccagaattatgcatagtggcggctaaaaccgccggaacatacatttttt 18558782  T
Q  235 agccgccggaaaacacgcg 253  Q
    |||||||| ||||||||||    
T  18558781 agccgccgaaaaacacgcg 18558763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 35 - 253
Target Start/End: Original strand, 5660758 - 5660976
Alignment:
Q  35 tatgtaaataacggcgtttgaaactgccgctatatacaattaaataaccgccactttaaaccaagtatataacggcggacaacatggcggctacgtaaaa 134  Q
    ||||||||||| |||| || ||||||||||||||||||||||||||||||||||| ||| ||||||||| || |||||||||| ||||||||||||||||    
T  5660758 tatgtaaataatggcggttaaaactgccgctatatacaattaaataaccgccactataagccaagtataaaatggcggacaacgtggcggctacgtaaaa 5660857  T
Q  135 actgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcatagtggcggctaaaaccgccggaatatacatttttt 234  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||  |||||| |||||||||||||||||||||||||| |||||||||||    
T  5660858 actgccgctttaaacattgtggcaggcaaaatttcggcagtttttaaaacgcctaaattgtacatagtggcggctaaaaccgccggaacatacatttttt 5660957  T
Q  235 agccgccggaaaacacgcg 253  Q
    ||||| |||||||||||||    
T  5660958 agccgtcggaaaacacgcg 5660976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 300 - 358
Target Start/End: Complemental strand, 6007598 - 6007540
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccc 358  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6007598 aatctctaaattattttatgtcaaaatcacttttattttaatccgtaacaaacgggccc 6007540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 300 - 360
Target Start/End: Original strand, 35308304 - 35308364
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctt 360  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  35308304 aatctctaaattattttatgtcaaaatcacttttattttaatccgtaacaaaagggccctt 35308364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 4443901 - 4443839
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcccttaa 362  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  4443901 aatctataaattattttatgtcaaaatcacttttattttaatccgtaacaaacggacccttaa 4443839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 300 - 361
Target Start/End: Original strand, 1153830 - 1153891
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctta 361  Q
    ||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||    
T  1153830 aatctctaaattattttatatcaaaatcacttttattttaatctgtaacaaacgggccctta 1153891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 300 - 357
Target Start/End: Original strand, 17073146 - 17073203
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcc 357  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  17073146 aatctctaaattattttatgtcaaaatcacttttattttaatctgtaacaaacgggcc 17073203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 17575124 - 17575067
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcc 357  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  17575124 aatctctaaattattttatgtcaaaatcacttttattttaatctgtaacaaacgggcc 17575067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 40796310 - 40796394
Alignment:
Q  277 aaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctta 361  Q
    ||||||||||| |||||| | | ||||||||||||||| |||||| | ||||||||||||||||||| |||| ||||||||||||    
T  40796310 aaatagattctgatttttcataaaatctctaaattattatatgtcaagatcacttttattttaatccataacgaacgggccctta 40796394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 300 - 358
Target Start/End: Original strand, 27882615 - 27882673
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccc 358  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  27882615 aatctctatattattttatgtcaaaatcacttttattttaatccgtaacaaacaggccc 27882673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 300 - 358
Target Start/End: Original strand, 28022795 - 28022853
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccc 358  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  28022795 aatctctatattattttatgtcaaaatcacttttattttaatccgtaacaaacaggccc 28022853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 267 - 351
Target Start/End: Original strand, 5424605 - 5424689
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaa 351  Q
    |||||||  ||||||||||||  |||||   | |||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  5424605 aacaaacgcaaaatagattctgctttttcctaaaatctctaaattattttatgttaaaatcacttttattttaatccgtaacaaa 5424689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 300 - 352
Target Start/End: Complemental strand, 15199656 - 15199604
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  15199656 aatctctaaattattttatgtcaaaatcacttttattttaatccgtaataaac 15199604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 300 - 356
Target Start/End: Complemental strand, 27917476 - 27917420
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggc 356  Q
    ||||| ||||||||||||| || ||||||||||||||||||| ||||||||||||||    
T  27917476 aatctttaaattattttatatcaaaatcacttttattttaattcgtaacaaacgggc 27917420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 300 - 356
Target Start/End: Complemental strand, 27963895 - 27963839
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggc 356  Q
    ||||| ||||||||||||| || ||||||||||||||||||| ||||||||||||||    
T  27963895 aatctttaaattattttatatcaaaatcacttttattttaattcgtaacaaacgggc 27963839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 300 - 356
Target Start/End: Original strand, 33489493 - 33489549
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggc 356  Q
    |||||||||||||||  ||||| ||||||||||||||||||| ||||||||||||||    
T  33489493 aatctctaaattattgaatgtcaaaatcacttttattttaattcgtaacaaacgggc 33489549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 302 - 357
Target Start/End: Complemental strand, 27882115 - 27882060
Alignment:
Q  302 tctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcc 357  Q
    |||||||||||||||||||| ||||||||||||||||||||   ||||||||||||    
T  27882115 tctctaaattattttatgtcaaaatcacttttattttaatcttaaacaaacgggcc 27882060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 302 - 357
Target Start/End: Complemental strand, 28022296 - 28022241
Alignment:
Q  302 tctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcc 357  Q
    |||||||||||||||||||| ||||||||||||||||||||   ||||||||||||    
T  28022296 tctctaaattattttatgtcaaaatcacttttattttaatcttaaacaaacgggcc 28022241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 289 - 355
Target Start/End: Complemental strand, 27881264 - 27881198
Alignment:
Q  289 attttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacggg 355  Q
    |||||||| | ||||||||||||||||||| || |||||| ||| |||||||| |||||||||||||    
T  27881264 attttttatataatctctaaattattttatatcaaaatcaatttcattttaattcgtaacaaacggg 27881198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 358
Target Start/End: Original strand, 27965833 - 27965891
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccc 358  Q
    |||||||| ||||||||||||| |||||||||||||||||||| |||| |||| |||||    
T  27965833 aatctctatattattttatgtcaaaatcacttttattttaatcagtaataaacaggccc 27965891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 289 - 355
Target Start/End: Complemental strand, 28021445 - 28021379
Alignment:
Q  289 attttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacggg 355  Q
    |||||||| | ||||||||||||||||||| || |||||| ||| |||||||| |||||||||||||    
T  28021445 attttttatataatctctaaattattttatatcaaaatcaatttcattttaattcgtaacaaacggg 28021379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 354
Target Start/End: Original strand, 35102737 - 35102791
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgg 354  Q
    ||||||||||||||||||| || |||||||||||||||||||  |||||||||||    
T  35102737 aatctctaaattattttatatcaaaatcacttttattttaatatgtaacaaacgg 35102791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 300 - 352
Target Start/End: Complemental strand, 5764807 - 5764755
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    |||| ||||||||||||||||| |||||||||||||||||||  |||||||||    
T  5764807 aatcgctaaattattttatgtcaaaatcacttttattttaatttgtaacaaac 5764755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 339779 - 339720
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccct 359  Q
    |||||||||||||||  ||||| ||||||||||||||||||||| ||||| | |||||||    
T  339779 aatctctaaattattcgatgtcaaaatcacttttattttaatccataacatatgggccct 339720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 5424299 - 5424240
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccct 359  Q
    ||||| |||||||||||||||| ||||||||||||||||||    |||||||||||||||    
T  5424299 aatctttaaattattttatgtcaaaatcacttttattttaaattttaacaaacgggccct 5424240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 11464655 - 11464714
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccct 359  Q
    |||||||||||||||||  ||| |||||| ||||||||||||| ||||||||||| ||||    
T  11464655 aatctctaaattatttttcgtcaaaatcatttttattttaatctgtaacaaacggaccct 11464714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 302 - 357
Target Start/End: Complemental strand, 27964737 - 27964682
Alignment:
Q  302 tctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcc 357  Q
    ||||||||||||||| |||| |||||||||||||||||||   |||||||||||||    
T  27964737 tctctaaattattttctgtcaaaatcacttttattttaatgtttaacaaacgggcc 27964682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 784 - 841
Target Start/End: Original strand, 32009354 - 32009411
Alignment:
Q  784 ctttgtatataaaattttacgtacacnatgatgcacatatttgtatatctcttttcaa 841  Q
    |||||||||| ||||||| | | ||  |||||||||||||||||||||||||||||||    
T  32009354 ctttgtatattaaatttttcatccataatgatgcacatatttgtatatctcttttcaa 32009411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 314 - 359
Target Start/End: Complemental strand, 5765582 - 5765537
Alignment:
Q  314 tttatgtcgaaatcacttttattttaatccgtaacaaacgggccct 359  Q
    |||||||| ||||||||||||||||||| |||||||||||| ||||    
T  5765582 tttatgtcaaaatcacttttattttaattcgtaacaaacggaccct 5765537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 345
Target Start/End: Original strand, 28828531 - 28828567
Alignment:
Q  309 attattttatgtcgaaatcacttttattttaatccgt 345  Q
    ||||||||||||| |||||||||||||||||||||||    
T  28828531 attattttatgtcaaaatcacttttattttaatccgt 28828567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 40737322 - 40737286
Alignment:
Q  323 aaatcacttttattttaatccgtaacaaacgggccct 359  Q
    |||||||||||||||||||||||||||||| ||||||    
T  40737322 aaatcacttttattttaatccgtaacaaacaggccct 40737286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 6007537 - 6007478
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccct 359  Q
    |||||||||||||||||| | | |||| ||||| ||||||||||||||| ||| ||||||    
T  6007537 aatctctaaattattttaagacaaaattactttaattttaatccgtaaccaacaggccct 6007478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 304 - 351
Target Start/End: Original strand, 45045540 - 45045587
Alignment:
Q  304 tctaaattattttatgtcgaaatcacttttattttaatccgtaacaaa 351  Q
    ||||||| | |||||||| |||| ||||||||||||||||||||||||    
T  45045540 tctaaatcaatttatgtcaaaattacttttattttaatccgtaacaaa 45045587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 302 - 344
Target Start/End: Complemental strand, 17072798 - 17072756
Alignment:
Q  302 tctctaaattattttatgtcgaaatcacttttattttaatccg 344  Q
    ||||||||||||||||| || ||||||| ||||||||||||||    
T  17072798 tctctaaattattttatatcaaaatcacctttattttaatccg 17072756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 302 - 344
Target Start/End: Original strand, 17575473 - 17575515
Alignment:
Q  302 tctctaaattattttatgtcgaaatcacttttattttaatccg 344  Q
    ||||||||||||||||| || ||||||| ||||||||||||||    
T  17575473 tctctaaattattttatatcaaaatcacctttattttaatccg 17575515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 168; Significance: 1e-89; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 35 - 250
Target Start/End: Complemental strand, 20569996 - 20569781
Alignment:
Q  35 tatgtaaataacggcgtttgaaactgccgctatatacaattaaataaccgccactttaaaccaagtatataacggcggacaacatggcggctacgtaaaa 134  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  20569996 tatgtaaataatggcatttgaaactgccgctatatacaattaaataaccgccactttaagccaagtataaaacggcggacaacatggcggctacgtaaaa 20569897  T
Q  135 actgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcatagtggcggctaaaaccgccggaatatacatttttt 234  Q
    | ||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||| | |||||||||||||||||||||||||| |||||||||||    
T  20569896 aatgccgctttaaacattgtggcaggcaaaatttcggcaatttttaaaacgccagaattatacatagtggcggctaaaaccgccggaacatacatttttt 20569797  T
Q  235 agccgccggaaaacac 250  Q
    |||||| |||||||||    
T  20569796 agccgcgggaaaacac 20569781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 35 - 253
Target Start/End: Original strand, 26473861 - 26474079
Alignment:
Q  35 tatgtaaataacggcgtttgaaactgccgctatatacaattaaataaccgccactttaaaccaagtatataacggcggacaacatggcggctacgtaaaa 134  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||    
T  26473861 tatgtaaataatggcgtttgaaactgccgctatatacaattaaataaccgccactttaagccaagtataaaatggcggacaacatggcggctacgtaaaa 26473960  T
Q  135 actgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcatagtggcggctaaaaccgccggaatatacatttttt 234  Q
    |||||| |||||||| |||| |||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  26473961 actgccactttaaaccttgtagcaggcaaaatatcggcagtttttaaaacgccagaattgtgcatagtggcggctaaaactgccggaacatacatttttt 26474060  T
Q  235 agccgccggaaaacacgcg 253  Q
    |||||| ||||||||||||    
T  26474061 agccgctggaaaacacgcg 26474079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 35 - 253
Target Start/End: Complemental strand, 27301526 - 27301309
Alignment:
Q  35 tatgtaaataacggcgtttgaaactgccgctatatacaattaaataaccgccactttaaaccaagtatataacggcggacaacatggcggctacgtaaaa 134  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  27301526 tatgtaaataatggcgtttaaaactgccgctatatacaattaaataaccgccactttaagccaagtataaaacggcggacaacatggcggctacgtaaaa 27301427  T
Q  135 actgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcat-agtggcggctaaaaccgccggaatatacattttt 233  Q
    ||||| ||||||||||||||||||||| |||||||||||| |||| ||||||||||| ||||||| |||| ||||||| |||| ||||| ||| ||||||    
T  27301426 actgctgctttaaacattgtggcaggcaaaatttcggcag-ttttaaaacgccagaa-tgtgcataagtgacggctaataccgtcggaacatatattttt 27301329  T
Q  234 tagccgccggaaaacacgcg 253  Q
    ||||||||||||||||||||    
T  27301328 tagccgccggaaaacacgcg 27301309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 42834741 - 42834826
Alignment:
Q  276 aaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctta 361  Q
    |||||||||||| |||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  42834741 aaaatagattctgatttttcaaaaaatctctaaattattttatgtcaaaatcacttttattttaatccgtaacaaacggtccctta 42834826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 267 - 355
Target Start/End: Complemental strand, 6941326 - 6941238
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacggg 355  Q
    |||||||| |||||||||||| |||||| | | ||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  6941326 aacaaacacaaaatagattctgatttttcataaaatttctaaattattttacgtcaaaatcacttttattttaatccgtaacaaacggg 6941238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 47793247 - 47793188
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccct 359  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  47793247 aatctctaaattattttatgtcaaaatcacttttattttaatccgtaacaaacgggccct 47793188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 6844388 - 6844326
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcccttaa 362  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  6844388 aatctctaaattattttatgtcaaaatcacttttattttaatctgtaacaaacgggcccttaa 6844326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 33813427 - 33813486
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccct 359  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  33813427 aatctctaaattattttatgtcaaaatcacttttattttaatccgtaacaaacggaccct 33813486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 33872897 - 33872956
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccct 359  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  33872897 aatctctaaattattttatgtcaaaatcacttttattttaatccgtaacaaacggaccct 33872956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 8697792 - 8697906
Alignment:
Q  133 aaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcatagtggcggctaaaaccgccggaatatacatttt 232  Q
    |||| |||||||||||| |||||| || | ||||||||||||||||  || |||||||| ||| ||||| |||||||||||| ||||||| || ||  ||    
T  8697792 aaaccgccgctttaaactttgtggtagacaaaatttcggcagttttgaaaccgccagaaatgtacatagcggcggctaaaactgccggaacatccaaatt 8697891  T
Q  233 ttagccgccggaaaa 247  Q
    |||||||||||||||    
T  8697892 ttagccgccggaaaa 8697906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 270 - 352
Target Start/End: Complemental strand, 43114715 - 43114633
Alignment:
Q  270 aaacataaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    ||||| |||||||||| | |||||| | | |||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  43114715 aaacacaaaatagattatgatttttcataaaatctctaaattattttatgtcaaaatcacttttattttaatccgtatcaaac 43114633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 267 - 361
Target Start/End: Original strand, 45296890 - 45296984
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctta 361  Q
    |||||||| |||||| |||||  ||||| | | ||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||| |||||    
T  45296890 aacaaacacaaaatacattctggtttttcataaaatctctaaattattttatatcgaaatcacttttattttaatctgtaacaagcgggtcctta 45296984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 47795861 - 47795799
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcccttaa 362  Q
    ||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  47795861 aatctataaattattttatatcaaaatcacttttattttaatccgtaacaaacgggcccttaa 47795799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 300 - 361
Target Start/End: Complemental strand, 47795800 - 47795739
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctta 361  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  47795800 aatctctaaattattttatgttaaaatcacttttattttaatccgtaacaaaagggccctta 47795739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 267 - 356
Target Start/End: Original strand, 47796610 - 47796699
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggc 356  Q
    |||||||  |||||||||||| | |||||| | |||||||||||||||||||||  |||| |||||||||||||| ||||||||||||||    
T  47796610 aacaaacgcaaaatagattctgactttttataaaatctctaaattattttatgtaaaaataacttttattttaattcgtaacaaacgggc 47796699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 33674905 - 33674841
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcccttaaaa 364  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||| ||||    
T  33674905 aatctctaaattattttatgtcaaaatcatttttattttaatccgtaacaaacgggtcctaaaaa 33674841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 300 - 356
Target Start/End: Original strand, 47794760 - 47794816
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggc 356  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  47794760 aatctctaatttattttatgtcaaaatcacttttattttaatccgtaacaaacgggc 47794816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 276 - 352
Target Start/End: Original strand, 49480368 - 49480444
Alignment:
Q  276 aaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    |||||||||||||||||||   | |||||||||||||||||||||| |||||||||||||||||||  |||||||||    
T  49480368 aaaatagattctaatttttcttaaaatctctaaattattttatgtcaaaatcacttttattttaatatgtaacaaac 49480444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 300 - 363
Target Start/End: Original strand, 6614426 - 6614489
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcccttaaa 363  Q
    ||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||    
T  6614426 aatctttaaattattttatgtcaaaatcacttttattttaatctgtaacaaacgggcctttaaa 6614489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 33241005 - 33240946
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccct 359  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||    
T  33241005 aatctctaaattattttatgtcaaaatcacttttattttaatccataacaaacggaccct 33240946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 267 - 337
Target Start/End: Original strand, 7561990 - 7562060
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattt 337  Q
    ||||||||||||||||||| | |||||| | | |||||||||||||||||||||| |||||||||||||||    
T  7561990 aacaaacataaaatagattatgatttttcataaaatctctaaattattttatgtcaaaatcacttttattt 7562060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 300 - 358
Target Start/End: Original strand, 10338324 - 10338382
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccc 358  Q
    |||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||    
T  10338324 aatctctaaattattttatgtcaaaatcacttttattttaatatgtaacaaacgggccc 10338382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 298 - 362
Target Start/End: Complemental strand, 39842720 - 39842657
Alignment:
Q  298 agaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcccttaa 362  Q
    |||||||||||||||||||||||| |||||| |||||||||||| |||||||||||| |||||||    
T  39842720 agaatctctaaattattttatgtcaaaatcatttttattttaat-cgtaacaaacggacccttaa 39842657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 300 - 355
Target Start/End: Complemental strand, 24686115 - 24686060
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacggg 355  Q
    ||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||    
T  24686115 aatctctaaattattgtatgtcaaaattacttttattttaatccgtaacaaacggg 24686060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 43326123 - 43326182
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccct 359  Q
    |||||||||||||||||||||  ||||||||||||||||||||||| |||||||| ||||    
T  43326123 aatctctaaattattttatgtgaaaatcacttttattttaatccgtgacaaacggaccct 43326182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 300 - 354
Target Start/End: Complemental strand, 11981638 - 11981584
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgg 354  Q
    |||||||||||||||||||||| |||||||||||||||||||| | |||||||||    
T  11981638 aatctctaaattattttatgtcaaaatcacttttattttaatctgcaacaaacgg 11981584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 300 - 346
Target Start/End: Complemental strand, 42429518 - 42429472
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgta 346  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  42429518 aatctctaaattattttatgtcaaaatcacttttattttaatccgta 42429472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 49243706 - 49243644
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcccttaa 362  Q
    ||||||||||||||||||  || ||||||||||||||||||||| |||||||||||| |||||    
T  49243706 aatctctaaattattttacatcaaaatcacttttattttaatccataacaaacgggctcttaa 49243644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 300 - 352
Target Start/End: Original strand, 47795660 - 47795712
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    |||||||||||||||||||||  |||||| |||||||||||||||||||||||    
T  47795660 aatctctaaattattttatgtgaaaatcatttttattttaatccgtaacaaac 47795712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 304 - 359
Target Start/End: Complemental strand, 10066029 - 10065974
Alignment:
Q  304 tctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccct 359  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||  |||||||    
T  10066029 tctaaattattttatgtcaaaatcacttttattttaatctgtaacaagtgggccct 10065974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 323 - 362
Target Start/End: Complemental strand, 12016804 - 12016765
Alignment:
Q  323 aaatcacttttattttaatccgtaacaaacgggcccttaa 362  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  12016804 aaatcacttttattttaatccgtaacaaacgggcccttaa 12016765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 276 - 347
Target Start/End: Complemental strand, 26271896 - 26271825
Alignment:
Q  276 aaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaa 347  Q
    |||||| ||| |||||||  ||| |||||||||||||||||||||| ||||  |||||||||||||||||||    
T  26271896 aaaataaattataattttacaaaaaatctctaaattattttatgtcaaaattgcttttattttaatccgtaa 26271825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 267 - 352
Target Start/End: Original strand, 15843985 - 15844071
Alignment:
Q  267 aacaaacataaaatagattctaatttttt-aaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    ||||||||||||||||||| ||||||||| ||| ||| |||||||||||  || || |||||| ||||||||||||  |||||||||    
T  15843985 aacaaacataaaatagattttaattttttaaaaaaatatctaaattattaaatatcaaaatcatttttattttaatatgtaacaaac 15844071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 267 - 352
Target Start/End: Original strand, 15848724 - 15848810
Alignment:
Q  267 aacaaacataaaatagattctaatttttt-aaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    ||||||||||||||||||| ||||||||| ||| ||| |||||||||||  || || |||||| ||||||||||||  |||||||||    
T  15848724 aacaaacataaaatagattttaattttttaaaaaaatatctaaattattaaatatcaaaatcatttttattttaatatgtaacaaac 15848810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 358
Target Start/End: Original strand, 43115124 - 43115182
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccc 358  Q
    ||||| |||||||||||||||| |||| |||||||||||||||| ||||| ||||||||    
T  43115124 aatctttaaattattttatgtcaaaattacttttattttaatccataacatacgggccc 43115182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 47793294 - 47793252
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaa 309  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  47793294 aacaaacataaaatagattctgattttttaaagaatctctaaa 47793252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 300 - 353
Target Start/End: Complemental strand, 45807912 - 45807859
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacg 353  Q
    ||||||||||||||||||| || |||| |||||||||||||||| |||||||||    
T  45807912 aatctctaaattattttatatcaaaattacttttattttaatccataacaaacg 45807859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 304 - 352
Target Start/End: Original strand, 11335820 - 11335868
Alignment:
Q  304 tctaaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    ||||||||||||||| || ||||||||||||||||||| ||||||||||    
T  11335820 tctaaattattttatatcaaaatcacttttattttaatacgtaacaaac 11335868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 304 - 352
Target Start/End: Original strand, 11493839 - 11493887
Alignment:
Q  304 tctaaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    ||||||||||||||| || ||||||||||||||||||| ||||||||||    
T  11493839 tctaaattattttatatcaaaatcacttttattttaatacgtaacaaac 11493887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 300 - 355
Target Start/End: Original strand, 52404341 - 52404397
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttatttt-aatccgtaacaaacggg 355  Q
    |||||||||||||||||||||| |||||| ||||||||| ||| |||||||||||||    
T  52404341 aatctctaaattattttatgtcaaaatcatttttattttaaatacgtaacaaacggg 52404397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 302 - 356
Target Start/End: Original strand, 47795602 - 47795655
Alignment:
Q  302 tctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggc 356  Q
    |||||||||||||||||||| |||||||||| ||||||||  |||||||||||||    
T  47795602 tctctaaattattttatgtc-aaatcactttaattttaatatgtaacaaacgggc 47795655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 267 - 352
Target Start/End: Original strand, 15597621 - 15597706
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    |||||||| |||||| ||| |||||||||| | ||||||||||||||   ||||| ||||   ||||||||||||| |||||||||    
T  15597621 aacaaacacaaaatatattttaattttttataaaatctctaaattatggaatgtcaaaatgttttttattttaatctgtaacaaac 15597706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 206 - 250
Target Start/End: Complemental strand, 20573746 - 20573702
Alignment:
Q  206 ggctaaaaccgccggaatatacattttttagccgccggaaaacac 250  Q
    ||||||||| ||| ||| |||||||||||||||||||||||||||    
T  20573746 ggctaaaactgccagaacatacattttttagccgccggaaaacac 20573702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 300 - 339
Target Start/End: Complemental strand, 6318831 - 6318792
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttatttta 339  Q
    |||||||||||||||||||||| ||||||||| |||||||    
T  6318831 aatctctaaattattttatgtcaaaatcacttctatttta 6318792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 300 - 354
Target Start/End: Original strand, 6319186 - 6319240
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgg 354  Q
    ||||||||||||||||  |||| |||| | |||||||||||||| ||||||||||    
T  6319186 aatctctaaattatttcgtgtcaaaattatttttattttaatccataacaaacgg 6319240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 300 - 341
Target Start/End: Complemental strand, 17054152 - 17054112
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaat 341  Q
    |||||||||||||||||| ||| |||||||||||||||||||    
T  17054152 aatctctaaattatttta-gtcaaaatcacttttattttaat 17054112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 242
Target Start/End: Original strand, 18389022 - 18389131
Alignment:
Q  133 aaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcatagtggcggctaaaaccgccggaatatacatttt 232  Q
    ||||||||| ||||||| ||||||||||  |||||||| |||||||  || ||||||  | ||  |||| ||||||||||||| ||| ||||  |  |||    
T  18389022 aaactgccgttttaaactttgtggcaggaaaaatttcgacagttttgaaaccgccagtgtggtatataggggcggctaaaaccaccgcaataagcgattt 18389121  T
Q  233 ttagccgccg 242  Q
    ||||||||||    
T  18389122 ttagccgccg 18389131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 160; Significance: 8e-85; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 160; E-Value: 8e-85
Query Start/End: Original strand, 35 - 253
Target Start/End: Complemental strand, 41678528 - 41678310
Alignment:
Q  35 tatgtaaataacggcgtttgaaactgccgctatatacaattaaataaccgccactttaaaccaagtatataacggcggacaacatggcggctacgtaaaa 134  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| | ||||||| ||||||||| ||||||||||||||||||||    
T  41678528 tatgtaaataatggcgtttgaaactgtcgctatatacaattaaataaccgccactttaagc-aagtataaaacggcggataacatggcggctacgtaaaa 41678430  T
Q  135 actgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcatagtggcggctaaaaccgccggaatatacatt-ttt 233  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||| |||    
T  41678429 actgccgctttaaacattgtggcaggcaaaatttcggtagtttttaaaacgccagaattgtgtatagtggcggctaaaaccgccggaacatacatttttt 41678330  T
Q  234 tagccgccggaaaacacgcg 253  Q
    |||| |||||||||||||||    
T  41678329 tagctgccggaaaacacgcg 41678310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 47 - 253
Target Start/End: Original strand, 43942267 - 43942472
Alignment:
Q  47 ggcgtttgaaactgccgctatatacaattaaataaccgccactttaaaccaagtatataacggcggacaacatggcggctacgtaaaaactgccgcttta 146  Q
    |||||||||||||||||||||||||||||||||||| | |||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  43942267 ggcgtttgaaactgccgctatatacaattaaataactgtcactttaagccaagtataaaacggcggacaacatggcggctacgtaaaaactgccacttta 43942366  T
Q  147 aacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcatagtggcggctaaaaccgccggaatatacattttttagccgccggaaa 246  Q
    ||| ||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||| |||    
T  43942367 aaccttgtggcaggcaaaatatcggcagtttttaaaacgccagaattgtgcatagtggcggctaaaactgccggaacataca-tttttagccgccgaaaa 43942465  T
Q  247 acacgcg 253  Q
    |||||||    
T  43942466 acacgcg 43942472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 35 - 222
Target Start/End: Complemental strand, 17364358 - 17364171
Alignment:
Q  35 tatgtaaataacggcgtttgaaactgccgctatatacaattaaataaccgccactttaaaccaagtatataacggcggacaacatggcggctacgtaaaa 134  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||| |||||||||    
T  17364358 tatgtaaataatggtgtttgaaactgccgctatatacaattaaataaccgccactttaagccaaatataaaacggcggacaacatggcggttacgtaaaa 17364259  T
Q  135 actgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcatagtggcggctaaaaccgccggaa 222  Q
    |||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||    
T  17364258 actgccgctttaaacattgtggtaggcaaaatttcggcagtttttaaaacgccagaattgtacatagtggcggctaaaatcgccggaa 17364171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 534 - 784
Target Start/End: Original strand, 6666307 - 6666558
Alignment:
Q  534 aatggatgattgtagtatggagacattgctttcgtatcattgtttgaccggtattcgtttgttttagannnnnnnnctt-cgtattttagtttcttctga 632  Q
    ||||| |||| ||| |||||||| |||| ||| ||||||||||||||||| ||||||||||||| | |         || | ||||||||||||||||||    
T  6666307 aatggttgatcgtaatatggagaaattgtttttgtatcattgtttgaccgatattcgtttgtttcatattttatttttttcatattttagtttcttctga 6666406  T
Q  633 tgtcactaacgcgtagccatatttgttctttatgcattaacacctctggatccgcatccggtaactgagttggacaaggtggtaaacaaactaaggatca 732  Q
    ||| ||||||| |||||| | |||||| |||||| |||| ||||||| ||| ||| ||  || |||||||| ||||  ||||||||||||||||||||||    
T  6666407 tgttactaacgtgtagccttgtttgttttttatgtattagcacctctagattcgcttctagtgactgagtttgacagtgtggtaaacaaactaaggatca 6666506  T
Q  733 aacataaagcatactatgtagagtttgatgcacaccatgcgagagtatatgc 784  Q
    || ||| | |||||||  | ||| || |||||||||||| || |||||||||    
T  6666507 aatatagaacatactacctggagattaatgcacaccatgtgaaagtatatgc 6666558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 99 - 252
Target Start/End: Complemental strand, 25806667 - 25806514
Alignment:
Q  99 gtatataacggcggacaacatggcggctacgtaaaaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgca 198  Q
    ||||| ||||||||  | |||||||||||| |||||||| |||||  |||| ||||||||| | |||||||  ||||| |  |||| |||||||||||||    
T  25806667 gtataaaacggcggctaccatggcggctacctaaaaactaccgctgcaaacgttgtggcagacaaaatttccacagttataaaaacaccagaattgtgca 25806568  T
Q  199 tagtggcggctaaaaccgccggaatatacattttttagccgccggaaaacacgc 252  Q
    ||| |||||||||||||||||||| |||||||||||||||| | ||||| ||||    
T  25806567 tagcggcggctaaaaccgccggaacatacattttttagccgtcagaaaaaacgc 25806514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 276 - 355
Target Start/End: Complemental strand, 35223750 - 35223671
Alignment:
Q  276 aaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacggg 355  Q
    ||||||||||||||||||| | | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  35223750 aaaatagattctaatttttcataaaatctctaaattattttatgtcaaaatcacttttattttaatccgtaacaaacggg 35223671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 267 - 352
Target Start/End: Original strand, 30122037 - 30122122
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    |||||||| |||||||||||| |||||| | | |||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  30122037 aacaaacacaaaatagattctgatttttcataaaatctctaaattattttatgtcaaaatcacttttattttaatctgtaacaaac 30122122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 267 - 359
Target Start/End: Original strand, 10282600 - 10282692
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccct 359  Q
    |||||||  |||||||||||| |||||| | | |||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||    
T  10282600 aacaaacgaaaaatagattctgatttttcataaaatctctaaattattttatgtcaaaatcacttttattttaatctgtaacaaacaggccct 10282692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 24162303 - 24162388
Alignment:
Q  276 aaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctta 361  Q
    |||||||||||| |||||| | | |||||||||||||||||||||| |||||||||||||||||||  ||||||||||||| ||||    
T  24162303 aaaatagattctgatttttcataaaatctctaaattattttatgtcaaaatcacttttattttaatatgtaacaaacgggcactta 24162388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 22644755 - 22644696
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccct 359  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  22644755 aatctctaaattattttatgtcaaaatcacttttattttaatccgtaacaaacggaccct 22644696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 47222674 - 47222733
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccct 359  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  47222674 aatctctaaattattttatgtgaaaatcacttttattttaatccgtaacaaacgggccct 47222733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 300 - 361
Target Start/End: Complemental strand, 24689266 - 24689205
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctta 361  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||    
T  24689266 aatctctaaattattttatgtcaaaatcacttttattttaatccgtaacaaacaagccctta 24689205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 300 - 355
Target Start/End: Complemental strand, 1644460 - 1644405
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacggg 355  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1644460 aatctttaaattattttatgtcaaaatcacttttattttaatccgtaacaaacggg 1644405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 4399586 - 4399527
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccct 359  Q
    ||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||    
T  4399586 aatctctaaattattttatatcaaaatcacttttgttttaatccgtaacaaacgggccct 4399527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 29102603 - 29102544
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccct 359  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||    
T  29102603 aatctctaaattattttatgtcaaaatcaattttattttaatccgtaacaaacggaccct 29102544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 267 - 360
Target Start/End: Complemental strand, 11485929 - 11485835
Alignment:
Q  267 aacaaacataaaataga-ttctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctt 360  Q
    |||||||  |||||||| ||| ||||||| | | ||||||||||||| |||||||| ||||||||||||||||||||| ||||||||| ||||||    
T  11485929 aacaaacgcaaaatagaattcaaatttttcacaaaatctctaaattaatttatgtcaaaatcacttttattttaatccttaacaaacgagccctt 11485835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 133 - 243
Target Start/End: Complemental strand, 22708202 - 22708092
Alignment:
Q  133 aaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcatagtggcggctaaaaccgccggaatatacatttt 232  Q
    |||| |||||||||||| ||||||||| | ||||| ||||||||||  || |||||||||||||||||| ||||| |||||||||| ||| || ||  ||    
T  22708202 aaaccgccgctttaaactttgtggcagacaaaattccggcagttttgaaaccgccagaattgtgcatagcggcggttaaaaccgccagaacattcaaatt 22708103  T
Q  233 ttagccgccgg 243  Q
    ||||| |||||    
T  22708102 ttagctgccgg 22708092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 267 - 357
Target Start/End: Original strand, 23640876 - 23640965
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcc 357  Q
    ||||| || |||||||||||| |||||   || |||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||    
T  23640876 aacaagcacaaaatagattctgattttcataa-aatctctaaattattttatgtcaaaatcacttttattttaatctgcaacaaacgggcc 23640965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 267 - 357
Target Start/End: Complemental strand, 29854641 - 29854551
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcc 357  Q
    |||||||| |||||||||||| |||||| | | ||||| |||||||||||| ||| |||| ||||||||||||||| ||||| ||||||||    
T  29854641 aacaaacacaaaatagattctgatttttcatataatctttaaattattttacgtcaaaattacttttattttaatctgtaacgaacgggcc 29854551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 300 - 354
Target Start/End: Original strand, 33858164 - 33858218
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgg 354  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  33858164 aatctctaaattattttatgtcaaaatcacttttattttaatctgtaacaaacgg 33858218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 15640476 - 15640419
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcc 357  Q
    ||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  15640476 aatctataaattattttatgtcaaaatcacttttattttaatctgtaacaaacgggcc 15640419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 277 - 341
Target Start/End: Complemental strand, 38319932 - 38319868
Alignment:
Q  277 aaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaat 341  Q
    |||||||||||||||||| | | |||||||||||||||||||||  |||||||||||||||||||    
T  38319932 aaatagattctaatttttcataaaatctctaaattattttatgtgaaaatcacttttattttaat 38319868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 300 - 361
Target Start/End: Original strand, 15641159 - 15641220
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctta 361  Q
    |||||||||||||||| ||||| |||||||||||||||||| | ||||||||| ||||||||    
T  15641159 aatctctaaattatttgatgtcaaaatcacttttattttaaactgtaacaaacaggccctta 15641220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 661 - 734
Target Start/End: Complemental strand, 25128594 - 25128521
Alignment:
Q  661 tttatgcattaacacctctggatccgcatccggtaactgagttggacaaggtggtaaacaaactaaggatcaaa 734  Q
    |||||||||| |||||||| |||| ||||||||||||||| || |||||  | |||||||||||||||||||||    
T  25128594 tttatgcattgacacctctagatctgcatccggtaactgatttagacaaactagtaaacaaactaaggatcaaa 25128521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 267 - 351
Target Start/End: Original strand, 4594626 - 4594710
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaa 351  Q
    |||||||  |||||||||||| |||||| | |  |||| |||||||||||||||  ||||||||||||||||||||| |||||||    
T  4594626 aacaaacgcaaaatagattctgatttttcataatatctttaaattattttatgttaaaatcacttttattttaatccataacaaa 4594710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 206 - 250
Target Start/End: Original strand, 17513319 - 17513363
Alignment:
Q  206 ggctaaaaccgccggaatatacattttttagccgccggaaaacac 250  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  17513319 ggctaaaaccgccggaacatacattttttagccgccggaaaacac 17513363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 206 - 250
Target Start/End: Complemental strand, 17539895 - 17539851
Alignment:
Q  206 ggctaaaaccgccggaatatacattttttagccgccggaaaacac 250  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  17539895 ggctaaaaccgccggaacatacattttttagccgccggaaaacac 17539851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 300 - 360
Target Start/End: Complemental strand, 28974868 - 28974808
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctt 360  Q
    |||||||||||| ||||||||| |||| | ||||||||||||||||||||||| |||||||    
T  28974868 aatctctaaattgttttatgtcaaaatgaattttattttaatccgtaacaaacaggccctt 28974808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 304 - 364
Target Start/End: Complemental strand, 30122307 - 30122247
Alignment:
Q  304 tctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcccttaaaa 364  Q
    ||||||| |||||||||| |||| ||||||||||||||| ||||||||||| |||||||||    
T  30122307 tctaaatgattttatgtcaaaattacttttattttaatctgtaacaaacggacccttaaaa 30122247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 44434849 - 44434911
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcccttaa 362  Q
    |||||||| ||||||||||||| |||||||||||||||||||  |||||||||  ||||||||    
T  44434849 aatctctatattattttatgtcaaaatcacttttattttaatatgtaacaaactagcccttaa 44434911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 300 - 361
Target Start/End: Complemental strand, 15640294 - 15640233
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctta 361  Q
    ||||||||| |||||||| ||  |||||||||||||||||||| |||||||||||| |||||    
T  15640294 aatctctaatttattttacgtgaaaatcacttttattttaatctgtaacaaacgggtcctta 15640233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 276 - 353
Target Start/End: Complemental strand, 31277392 - 31277315
Alignment:
Q  276 aaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacg 353  Q
    |||||| ||||| |||||| | | |||||||||||||||||||| | |||||| |||||||||||||| ||| |||||    
T  31277392 aaaataaattctgatttttcataaaatctctaaattattttatgccaaaatcatttttattttaatccataataaacg 31277315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 300 - 352
Target Start/End: Original strand, 1644771 - 1644823
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    ||||||||||||||||||| |  |||||| |||||||||||||||||||||||    
T  1644771 aatctctaaattattttatataaaaatcaattttattttaatccgtaacaaac 1644823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 300 - 360
Target Start/End: Original strand, 26151339 - 26151399
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctt 360  Q
    ||||||||||| |||||||||  |||||||| |||||||||||| || |||||||||||||    
T  26151339 aatctctaaataattttatgtgaaaatcactcttattttaatccatatcaaacgggccctt 26151399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 300 - 351
Target Start/End: Complemental strand, 26970646 - 26970594
Alignment:
Q  300 aatctctaaattattttatgtcg-aaatcacttttattttaatccgtaacaaa 351  Q
    |||||||||||||||||||||   |||||||||||||||||||||||||||||    
T  26970646 aatctctaaattattttatgtaataaatcacttttattttaatccgtaacaaa 26970594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 300 - 352
Target Start/End: Complemental strand, 35526405 - 35526354
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    |||||||||||||||||||||  |||||||||||||||||||||| |||||||    
T  35526405 aatctctaaattattttatgtt-aaatcacttttattttaatccgaaacaaac 35526354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 23809100 - 23809162
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcccttaa 362  Q
    ||||| |||||||||||||||| |||| ||||||||||||||| |||| |||||  |||||||    
T  23809100 aatctataaattattttatgtcaaaataacttttattttaatctgtaagaaacgaacccttaa 23809162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 350
Target Start/End: Complemental strand, 32988517 - 32988467
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaa 350  Q
    |||||||||||||||| || || ||||||||||||||||||||| ||||||    
T  32988517 aatctctaaattatttaatatcaaaatcacttttattttaatccataacaa 32988467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Complemental strand, 35406992 - 35406955
Alignment:
Q  325 atcacttttattttaatccgtaacaaacgggcccttaa 362  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  35406992 atcacttttattttaatccgtaataaacgggcccttaa 35406955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 15641659 - 15641711
Alignment:
Q  309 attattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctta 361  Q
    ||||||||||||| |||||| |||||||||||||  ||||||| |||||||||    
T  15641659 attattttatgtcaaaatcatttttattttaatcaataacaaatgggccctta 15641711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 300 - 347
Target Start/End: Complemental strand, 19611068 - 19611022
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaa 347  Q
    |||||||||||||||||||||| ||| ||| |||||||||||||||||    
T  19611068 aatctctaaattattttatgtcaaaaccac-tttattttaatccgtaa 19611022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 542 - 597
Target Start/End: Complemental strand, 25128724 - 25128669
Alignment:
Q  542 attgtagtatggagacattgctttcgtatcattgtttgaccggtattcgtttgttt 597  Q
    |||||| |||| ||||| || |||| ||||||||||||| ||||||||||||||||    
T  25128724 attgtaatatgaagacaatgatttcatatcattgtttgatcggtattcgtttgttt 25128669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 300 - 354
Target Start/End: Original strand, 35526780 - 35526835
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaat-ccgtaacaaacgg 354  Q
    ||||| |||||||||||||||| |||||| | |||||||||| |||||||||||||    
T  35526780 aatctataaattattttatgtcaaaatcagtattattttaatcccgtaacaaacgg 35526835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 311 - 353
Target Start/End: Original strand, 1067210 - 1067252
Alignment:
Q  311 tattttatgtcgaaatcacttttattttaatccgtaacaaacg 353  Q
    ||||||||||  |||||||||||||||||||||||||| ||||    
T  1067210 tattttatgtgaaaatcacttttattttaatccgtaacgaacg 1067252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 300 - 342
Target Start/End: Original strand, 10282846 - 10282888
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatc 342  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  10282846 aatctctaaattattcaatgtcaaaatcacttttattttaatc 10282888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 300 - 342
Target Start/End: Original strand, 45447745 - 45447787
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatc 342  Q
    |||||||| ||||||||||||  ||||||||||||||||||||    
T  45447745 aatctctagattattttatgttaaaatcacttttattttaatc 45447787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 300 - 361
Target Start/End: Original strand, 26178195 - 26178256
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctta 361  Q
    ||||| ||||| |||||| ||  |||| |||||||||||||||| |||||||||||| ||||    
T  26178195 aatctataaataattttacgtgaaaatgacttttattttaatccataacaaacgggctctta 26178256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 1e-37; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 267 - 359
Target Start/End: Complemental strand, 660551 - 660459
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccct 359  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  660551 aacaaacataaaatagattctgattttttaaagaatctctaaattattttatgtcaaaatcacttttatttaaatccgtaacaaacgggccct 660459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 267 - 353
Target Start/End: Complemental strand, 13222156 - 13222070
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacg 353  Q
    |||||||  ||||||| ||||||||||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  13222156 aacaaacgcaaaataggttctaattttttataaaatctctaaattattttatatcaaaatcacttttattttaatccgtaacaaacg 13222070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 300 - 361
Target Start/End: Original strand, 7239057 - 7239118
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctta 361  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  7239057 aatctctaaattattttatgtcaaaatcacttttattttaatccgtaacaaacgggccctta 7239118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 267 - 351
Target Start/End: Original strand, 42816095 - 42816179
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaa 351  Q
    |||||||| |||||||||||| |||||| | | |||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  42816095 aacaaacacaaaatagattctgatttttcataaaatctctaaattattttacgtcaaaatcacttttattttaatccgtaacaaa 42816179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 300 - 358
Target Start/End: Complemental strand, 54175762 - 54175704
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccc 358  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  54175762 aatctctaaattattttatgtcaaaatcacttttattttaatccgtaacaaacgggccc 54175704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 267 - 364
Target Start/End: Complemental strand, 41103973 - 41103876
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcccttaaaa 364  Q
    |||||||| |||||||||| | |||||| | | |||||||||||||||||||||  |||||||||||||||||||||||||| ||||| || ||||||    
T  41103973 aacaaacacaaaatagattttgatttttcataaaatctctaaattattttatgtgaaaatcacttttattttaatccgtaacgaacggacctttaaaa 41103876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 5879125 - 5879011
Alignment:
Q  133 aaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcatagtggcggctaaaaccgccggaatatacatttt 232  Q
    |||| |||||||||||| ||||||||| | |||||||||| |||||  || |||||||| ||| ||||| |||||||||||| ||||||| || ||  ||    
T  5879125 aaaccgccgctttaaactttgtggcagacaaaatttcggccgttttgaaaccgccagaaatgtacatagcggcggctaaaactgccggaacatccaaatt 5879026  T
Q  233 ttagccgccggaaaa 247  Q
    |||||||||||||||    
T  5879025 ttagccgccggaaaa 5879011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 296 - 354
Target Start/End: Original strand, 7070641 - 7070699
Alignment:
Q  296 aaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgg 354  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7070641 aaagaatctttaaattattttatgtcaaaatcacttttattttaatccgtaacaaacgg 7070699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 300 - 354
Target Start/End: Complemental strand, 9518950 - 9518896
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgg 354  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  9518950 aatctctaaattattttatgtctaaatcacttttattttaatccgtaacaaacgg 9518896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 291 - 356
Target Start/End: Original strand, 24739210 - 24739275
Alignment:
Q  291 tttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggc 356  Q
    |||||| | ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  24739210 tttttataaaatctctaaattattttatatcaaaatcacttttattttaatccgtaacaaacgggc 24739275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 278 - 354
Target Start/End: Complemental strand, 16436017 - 16435941
Alignment:
Q  278 aatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgg 354  Q
    |||||||| |||||||| | | ||||||||||||||||||| || ||||||||||||||||| ||||||||||||||    
T  16436017 aatagattttaatttttcataaaatctctaaattattttatttcaaaatcacttttattttagtccgtaacaaacgg 16435941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 300 - 354
Target Start/End: Complemental strand, 12928477 - 12928423
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgg 354  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  12928477 aatctctaaattattttacgtcaaaatcacttttattttaatccgtaacaaacgg 12928423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 304 - 365
Target Start/End: Complemental strand, 49867028 - 49866967
Alignment:
Q  304 tctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcccttaaaat 365  Q
    |||||||||||||||||| |||||||||||||| |||||||| |||||||| ||||||||||    
T  49867028 tctaaattattttatgtcaaaatcacttttattctaatccgtgacaaacggacccttaaaat 49866967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 300 - 360
Target Start/End: Original strand, 19298684 - 19298744
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctt 360  Q
    |||||||||||| |||||||   ||||||||||||||||||||||||||||||||||||||    
T  19298684 aatctctaaattcttttatgcaaaaatcacttttattttaatccgtaacaaacgggccctt 19298744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 276 - 343
Target Start/End: Complemental strand, 50715640 - 50715573
Alignment:
Q  276 aaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatcc 343  Q
    |||||||||||| |||||| | | |||||||||||||||||||||  |||||||||||||||||||||    
T  50715640 aaaatagattctgatttttcacaaaatctctaaattattttatgtgaaaatcacttttattttaatcc 50715573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 11125220 - 11125146
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaat 341  Q
    |||||||| |||||||||| | ||||| |||| |||||||||||||||| ||||| |||| ||||||||||||||    
T  11125220 aacaaacacaaaatagattttgattttataaaaaatctctaaattatttaatgtcaaaattacttttattttaat 11125146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 300 - 354
Target Start/End: Original strand, 27839130 - 27839184
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgg 354  Q
    |||||||||||||||||||||| ||||| |||||||||||||| |||||||||||    
T  27839130 aatctctaaattattttatgtcaaaatctcttttattttaatctgtaacaaacgg 27839184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 282 - 352
Target Start/End: Complemental strand, 29100781 - 29100711
Alignment:
Q  282 gattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    |||||| |||||| | | ||||| ||||||||||||| || ||||||||||||||||||||||||||||||    
T  29100781 gattctgatttttcatataatctttaaattattttatatcaaaatcacttttattttaatccgtaacaaac 29100711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 267 - 352
Target Start/End: Complemental strand, 46255174 - 46255091
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    |||||||| |||||||||||| |||||| | | ||||||||||||||||||||   |||| |||||||||||||||||||| ||||    
T  46255174 aacaaacacaaaatagattctgatttttcatataatctctaaattattttatg--aaaattacttttattttaatccgtaaaaaac 46255091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 300 - 361
Target Start/End: Original strand, 36638741 - 36638802
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctta 361  Q
    |||||||||||||||||||||  |||||| ||||||||||||| |||||||||| |||||||    
T  36638741 aatctctaaattattttatgtgaaaatcatttttattttaatctgtaacaaacgcgccctta 36638802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 41692360 - 41692303
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcc 357  Q
    ||||| |||| ||||||||||| |||||||||||||||||||| ||||||||||||||    
T  41692360 aatctttaaagtattttatgtcaaaatcacttttattttaatctgtaacaaacgggcc 41692303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 300 - 352
Target Start/End: Complemental strand, 16877106 - 16877054
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    |||||||||||||||||||||   |||||||||||||||||||||||||||||    
T  16877106 aatctctaaattattttatgttataatcacttttattttaatccgtaacaaac 16877054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 300 - 352
Target Start/End: Original strand, 39136199 - 39136251
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    ||||||||||||||||||| || ||||||||||||||||||| ||||||||||    
T  39136199 aatctctaaattattttatctcaaaatcacttttattttaattcgtaacaaac 39136251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 267 - 352
Target Start/End: Complemental strand, 42882009 - 42881922
Alignment:
Q  267 aacaaacataaaatagattctaatttttt-aaagaatctctaaattattttatg-tcgaaatcacttttattttaatccgtaacaaac 352  Q
    |||||||| |||||||||||| ||||||| | | ||||||||||||||||||||    ||||||||||||||||||||| ||||||||    
T  42882009 aacaaacacaaaatagattctgattttttcatataatctctaaattattttatgaaaaaaatcacttttattttaatccataacaaac 42881922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 304 - 355
Target Start/End: Complemental strand, 43495748 - 43495697
Alignment:
Q  304 tctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacggg 355  Q
    |||||||||||||||||  ||||||||||||||||||||| |||||||||||    
T  43495748 tctaaattattttatgtgaaaatcacttttattttaatccttaacaaacggg 43495697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 267 - 353
Target Start/End: Complemental strand, 44886146 - 44886060
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacg 353  Q
    |||||||  |||||| ||||| |||||| | | ||| |||||||||||||||||  |||| ||||||||||||| ||||||||||||    
T  44886146 aacaaacgcaaaataaattctgatttttcatataatttctaaattattttatgttaaaattacttttattttaagccgtaacaaacg 44886060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 45032324 - 45032366
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaa 309  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  45032324 aacaaacataaaatagattctgattttttaaagaatctctaaa 45032366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 354
Target Start/End: Original strand, 45032371 - 45032425
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgg 354  Q
    |||||||||||||||||||||| |||||||||||||||||||   ||||||||||    
T  45032371 aatctctaaattattttatgtcaaaatcacttttattttaatttataacaaacgg 45032425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 54807014 - 54807076
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcccttaa 362  Q
    ||||||||| |||||||||||| |||||||||||||||||||  |||||||||| || |||||    
T  54807014 aatctctaacttattttatgtcaaaatcacttttattttaatttgtaacaaacgagctcttaa 54807076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 300 - 352
Target Start/End: Original strand, 5029141 - 5029193
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    |||||||||||||||||| ||| ||||||||||||||||||||  ||||||||    
T  5029141 aatctctaaattattttacgtcaaaatcacttttattttaatctttaacaaac 5029193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 307 - 351
Target Start/End: Complemental strand, 53140180 - 53140136
Alignment:
Q  307 aaattattttatgtcgaaatcacttttattttaatccgtaacaaa 351  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||    
T  53140180 aaattattttatgtcaaaatcagttttattttaatccgtaacaaa 53140136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 300 - 355
Target Start/End: Complemental strand, 32500188 - 32500133
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacggg 355  Q
    ||||||||||||||||||| |  |||||||||||||||||||| |||| |||||||    
T  32500188 aatctctaaattattttatattaaaatcacttttattttaatctgtaataaacggg 32500133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 306 - 352
Target Start/End: Complemental strand, 660089 - 660043
Alignment:
Q  306 taaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||||    
T  660089 taaattattttacgtgaaaatcacttttattttaatccgtaacaaac 660043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 309 - 359
Target Start/End: Original strand, 2494254 - 2494304
Alignment:
Q  309 attattttatgtcgaaatcacttttattttaatccgtaacaaacgggccct 359  Q
    ||||||||||||| |||||| ||||||||||| |||||||||||| |||||    
T  2494254 attattttatgtcaaaatcaattttattttaacccgtaacaaacgtgccct 2494304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 42746933 - 42746969
Alignment:
Q  317 atgtcgaaatcacttttattttaatccgtaacaaacg 353  Q
    ||||| |||||||||||||||||||||||||||||||    
T  42746933 atgtcaaaatcacttttattttaatccgtaacaaacg 42746969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 49897520 - 49897580
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcccttaa 362  Q
    ||||||||||||  |||||| | |||| |||| |||||||||||||||||||||| |||||||    
T  49897520 aatctctaaatt--tttatggcaaaataacttctattttaatccgtaacaaacggacccttaa 49897580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 300 - 357
Target Start/End: Original strand, 27271673 - 27271731
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcactttt-attttaatccgtaacaaacgggcc 357  Q
    ||||||||||||||||| |||  |||||| |||| ||||||||||||||||||| ||||    
T  27271673 aatctctaaattattttttgtaaaaatcattttttattttaatccgtaacaaacaggcc 27271731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 267 - 351
Target Start/End: Original strand, 56435493 - 56435578
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaa-gaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaa 351  Q
    |||||||| ||| || |||||| ||||||||  |||||||||||||||   ||||| | |||| |||||||||||||| |||||||    
T  56435493 aacaaacacaaattatattctatttttttaattgaatctctaaattatcaaatgtcaagatcatttttattttaatccataacaaa 56435578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 66; Significance: 1e-28; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 21822 - 21907
Alignment:
Q  276 aaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctta 361  Q
    |||||||||||| |||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  21822 aaaatagattctgatttttcaaaaaatctctaaattattttatgtcaaaatcacttttattttaatccgtaacaaacggtccctta 21907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 2e-26; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 278 - 359
Target Start/End: Complemental strand, 54142963 - 54142882
Alignment:
Q  278 aatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccct 359  Q
    ||||||||||||||||| | | |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  54142963 aatagattctaatttttcataaaatctctaaattattttatgtcaaaatcacttttattttaatctgtaacaaacgggccct 54142882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 664 - 841
Target Start/End: Complemental strand, 26778119 - 26777943
Alignment:
Q  664 atgcattaacacctctggatccgcatccggtaactgagttggacaaggtggtaaacaaactaaggatcaaacataaagcatactatgtagagtttgatgc 763  Q
    |||||||| ||||||| |||||| ||||||||||||| || ||||| ||| |||||| ||||||||||||| ||| | ||| ||| || |||||||||||    
T  26778119 atgcattagcacctctagatccgtatccggtaactgatttagacaatgtgataaacatactaaggatcaaatatagaacatcctacgtggagtttgatgc 26778020  T
Q  764 acaccatgcgagagtatatgctttgtatataaaattttacgtacacnatgatgcacatatttgtatatctcttttcaa 841  Q
      | | || |||| |||||| ||||||| | ||||  | | | ||  |||||||||||||||||||||||||||||||    
T  26778019 gga-cttgtgagattatatgttttgtattttaaataattcattcataatgatgcacatatttgtatatctcttttcaa 26777943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 23027701 - 23027642
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccct 359  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  23027701 aatctctaaattattttatgtcaaaatcacttttattttaattcgtaacaaacgggccct 23027642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 26863187 - 26863246
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccct 359  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  26863187 aatctctaaattatttgatgtcaaaatcacttttattttaatccgtaacaaacgggccct 26863246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 611 - 841
Target Start/End: Complemental strand, 26778983 - 26778752
Alignment:
Q  611 ttcgtattttagtttcttctgatgtcactaacgcgtagccatatttgttctttatgcattaacacctctggatccgcatccggtaactgagttggacaag 710  Q
    ||||||||||| |||||||| ||||  |||||| |||  | ||| |||| || |||||||| ||||||| | |||| ||||||||||||| || ||||||    
T  26778983 ttcgtattttaatttcttctaatgttgctaacgtgtaatcttatctgtt-ttaatgcattagcacctctagttccgtatccggtaactgatttagacaag 26778885  T
Q  711 gtggtaaacaaact---aaggatcaaacataaagcatactatgtagagtttgatgcacaccatgcgagagtatatgctttgtatataaaattttacgtac 807  Q
    ||| |||||| |||   |||||||||| ||| | ||||||| || |||||||||||  | | || |||| |||||| ||||| | | ||||  | | | |    
T  26778884 gtgataaacatactagcaaggatcaaatatagaacatactacgtggagtttgatgcgga-cttgtgagattatatgttttgttttttaaataattcattc 26778786  T
Q  808 acnatgatgcacatatttgtatatctcttttcaa 841  Q
    |  |||||||||||||||||||||||||||||||    
T  26778785 ataatgatgcacatatttgtatatctcttttcaa 26778752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 611 - 841
Target Start/End: Complemental strand, 26781008 - 26780777
Alignment:
Q  611 ttcgtattttagtttcttctgatgtcactaacgcgtagccatatttgttctttatgcattaacacctctggatccgcatccggtaactgagttggacaag 710  Q
    ||||||||||| |||||||| ||||  |||||| |||  | ||| |||| || |||||||| ||||||| | |||| ||||||||||||| || ||||||    
T  26781008 ttcgtattttaatttcttctaatgttgctaacgtgtaatcttatctgtt-ttaatgcattagcacctctagttccgtatccggtaactgatttagacaag 26780910  T
Q  711 gtggtaaacaaact---aaggatcaaacataaagcatactatgtagagtttgatgcacaccatgcgagagtatatgctttgtatataaaattttacgtac 807  Q
    ||| |||||| |||   |||||||||| ||| | ||||||| || |||||||||||  | | || |||| |||||| ||||| | | ||||  | | | |    
T  26780909 gtgataaacatactagcaaggatcaaatatagaacatactacgtggagtttgatgcgga-cttgtgagattatatgttttgttttttaaataattcattc 26780811  T
Q  808 acnatgatgcacatatttgtatatctcttttcaa 841  Q
    |  |||||||||||||||||||||||||||||||    
T  26780810 ataatgatgcacatatttgtatatctcttttcaa 26780777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 300 - 355
Target Start/End: Original strand, 7433760 - 7433815
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacggg 355  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  7433760 aatctctaaattattttatgtcaaaattacttttattttaatccgtaacaaacggg 7433815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 21388580 - 21388639
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccct 359  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||    
T  21388580 aatctctaaattattttatgtcaaaatcactttgattttaatccgtaacaaaagggccct 21388639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 40285202 - 40285261
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccct 359  Q
    ||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||    
T  40285202 aatctctaaattattttatatcaaaatcacttttattttaaaccgtaacaaacgggccct 40285261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 54356195 - 54356136
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccct 359  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||    
T  54356195 aatctctaaattatttaatgtcaaaatcacttttactttaatccgtaacaaacgggccct 54356136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 300 - 357
Target Start/End: Original strand, 34795200 - 34795257
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcc 357  Q
    |||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||    
T  34795200 aatctctaaattattttacgtcaaaattacttttattttaatccgtaacaaacgggcc 34795257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 300 - 352
Target Start/End: Complemental strand, 11632990 - 11632938
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  11632990 aatctctaaattattttatgtcaaaatcacttttatttaaatccgtaacaaac 11632938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 306 - 354
Target Start/End: Complemental strand, 12100983 - 12100935
Alignment:
Q  306 taaattattttatgtcgaaatcacttttattttaatccgtaacaaacgg 354  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12100983 taaattattttatgtcaaaatcacttttattttaatccgtaacaaacgg 12100935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 295 - 359
Target Start/End: Original strand, 44077905 - 44077969
Alignment:
Q  295 taaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccct 359  Q
    |||| |||||||||| ||||||||||| |||||| ||||||||||||||||||||||||| ||||    
T  44077905 taaataatctctaaaatattttatgtctaaatcatttttattttaatccgtaacaaacggaccct 44077969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 300 - 365
Target Start/End: Complemental strand, 10333028 - 10332962
Alignment:
Q  300 aatctctaaattattttatgtcgaaatca-cttttattttaatccgtaacaaacgggcccttaaaat 365  Q
    |||||||||||||||||||||| |||||| |||||||||||||  |||||||||||||||| |||||    
T  10333028 aatctctaaattattttatgtcaaaatcaacttttattttaatatgtaacaaacgggccctaaaaat 10332962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 304 - 362
Target Start/End: Original strand, 16106190 - 16106248
Alignment:
Q  304 tctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcccttaa 362  Q
    ||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||    
T  16106190 tctaaattattttatggaaaaatcacttttattttaatccataacaaacgggcccttaa 16106248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 300 - 361
Target Start/End: Original strand, 3942735 - 3942796
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctta 361  Q
    |||||||||||||||||| ||| |||||||||| ||||||| || |||||||||||||||||    
T  3942735 aatctctaaattattttaagtcaaaatcactttcattttaacccataacaaacgggccctta 3942796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 300 - 353
Target Start/End: Original strand, 44869122 - 44869175
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacg 353  Q
    |||||||||||||||||||||| ||||||||||||||||| ||| |||||||||    
T  44869122 aatctctaaattattttatgtcaaaatcacttttattttactccataacaaacg 44869175  T

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Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 300 - 360
Target Start/End: Complemental strand, 10297024 - 10296964
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctt 360  Q
    ||||||||||||||| |||||  ||||| |||||||||||||||||||||||||| |||||    
T  10297024 aatctctaaattattatatgtaaaaatctcttttattttaatccgtaacaaacggaccctt 10296964  T

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Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 709 - 776
Target Start/End: Original strand, 22819047 - 22819114
Alignment:
Q  709 aggtggtaaacaaactaaggatcaaacataaagcatactatgtagagtttgatgcacaccatgcgaga 776  Q
    |||||||||||| ||||||||||||| |||||  |||||| || ||||||||||||||||||| ||||    
T  22819047 aggtggtaaacacactaaggatcaaatataaaatatactacgtggagtttgatgcacaccatgtgaga 22819114  T

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Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 307 - 358
Target Start/End: Original strand, 24485762 - 24485813
Alignment:
Q  307 aaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccc 358  Q
    ||||||||||||||| ||||||||||||| |||||| |||||||||||||||    
T  24485762 aaattattttatgtcaaaatcacttttatattaatctgtaacaaacgggccc 24485813  T

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Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 267 - 342
Target Start/End: Original strand, 54981719 - 54981794
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatc 342  Q
    |||||||  |||||||||||| |||||| | | | |||||||||||| ||||||| ||||||||||||||||||||    
T  54981719 aacaaacgcaaaatagattctgatttttcataaagtctctaaattatattatgtcaaaatcacttttattttaatc 54981794  T

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Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 23027748 - 23027706
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaa 309  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  23027748 aacaaacataaaatagattctgattttttaaagaatctctaaa 23027706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 44869075 - 44869117
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaa 309  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  44869075 aacaaacataaaatagattctgattttttaaagaatctctaaa 44869117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 2693260 - 2693372
Alignment:
Q  133 aaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcatagtggcggctaaaaccgccggaatatacatttt 232  Q
    ||||||||| |||| || ||||||||||  ||||||| ||||||||  || ||||||  ||||  ||||||||||||||||| |||| || |  || |||    
T  2693260 aaactgccggtttatactttgtggcaggaaaaatttctgcagttttgaaaccgccagttttgtttatagtggcggctaaaactgccgcaacaagcaattt 2693359  T
Q  233 ttagccgccggaa 245  Q
    |||||||||||||    
T  2693360 ttagccgccggaa 2693372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 300 - 360
Target Start/End: Complemental strand, 8707945 - 8707885
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctt 360  Q
    |||||||||||||||||||||  ||||||||||| |||||||  ||||||||||| |||||    
T  8707945 aatctctaaattattttatgtgaaaatcactttttttttaatttgtaacaaacggaccctt 8707885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 300 - 360
Target Start/End: Complemental strand, 9059832 - 9059772
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctt 360  Q
    |||||||||||||||||||||  ||||||||||| |||||||  ||||||||||| |||||    
T  9059832 aatctctaaattattttatgtgaaaatcactttttttttaatttgtaacaaacggaccctt 9059772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 300 - 356
Target Start/End: Original strand, 10332871 - 10332927
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggc 356  Q
    |||||||||||| ||| | ||| |||||||| |||||||||||||||||||||||||    
T  10332871 aatctctaaattgtttcaggtcaaaatcactgttattttaatccgtaacaaacgggc 10332927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 300 - 340
Target Start/End: Original strand, 26168048 - 26168088
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaa 340  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  26168048 aatctctaaattattttatgtcaaaatcacttttattttaa 26168088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 306 - 362
Target Start/End: Complemental strand, 33832748 - 33832692
Alignment:
Q  306 taaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggcccttaa 362  Q
    |||||||||||||||| || |||||||||||||||| ||||||||| | ||||||||    
T  33832748 taaattattttatgtcaaattcacttttattttaattcgtaacaaatgagcccttaa 33832692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 21459538 - 21459479
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccct 359  Q
    |||||||||||||||| ||||  |||||||||||||||||||  |||||||||| |||||    
T  21459538 aatctctaaattatttgatgtaaaaatcacttttattttaatatgtaacaaacgagccct 21459479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 354
Target Start/End: Complemental strand, 45586020 - 45585966
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgg 354  Q
    |||||||||||||||||||||  |||||||||||||||||| | ||| |||||||    
T  45586020 aatctctaaattattttatgtaaaaatcacttttattttaaactgtagcaaacgg 45585966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 300 - 360
Target Start/End: Complemental strand, 10309660 - 10309600
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccctt 360  Q
    ||||||||||||||| |||||  ||||  ||||||||||||| |||||||||||| |||||    
T  10309660 aatctctaaattattatatgtaaaaattccttttattttaattcgtaacaaacggaccctt 10309600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 309 - 356
Target Start/End: Complemental strand, 46514925 - 46514878
Alignment:
Q  309 attattttatgtcgaaatcacttttattttaatccgtaacaaacgggc 356  Q
    ||||||||||||| |||||| |||||||||||||||||| | ||||||    
T  46514925 attattttatgtcaaaatcatttttattttaatccgtaatagacgggc 46514878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 300 - 358
Target Start/End: Original strand, 25250466 - 25250524
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggccc 358  Q
    ||||||||||||||||||| || ||||||  | |||||| ||| |||||||||||||||    
T  25250466 aatctctaaattattttatatcaaaatcagctatatttttatcggtaacaaacgggccc 25250524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 476 - 597
Target Start/End: Original strand, 22803496 - 22803617
Alignment:
Q  476 ttttggtatctctcatttcttaattcacgctcctttattgtttatctaacttttacataatggatgattgtagtatggagacattgctttcgtatcattg 575  Q
    |||||||||||||||||| | |||||||  |||||| ||||| ||||  | ||||  |||||  | |||||| ||||||||| || |||| ||||||||     
T  22803496 ttttggtatctctcatttgtcaattcaccgtcctttgttgttcatctctcatttatgtaatgactaattgtaatatggagacttttcttttgtatcattt 22803595  T
Q  576 tttgaccggtattcgtttgttt 597  Q
     |||| || ||||||| |||||    
T  22803596 cttgatcgatattcgtctgttt 22803617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 267 - 352
Target Start/End: Original strand, 27245911 - 27245996
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    |||||||| |||||||||| | |||||| | | |||||||||||||||| || |  |||||| ||||||||| || |||| |||||    
T  27245911 aacaaacacaaaatagattttgatttttcataaaatctctaaattatttcatattaaaatcaattttattttgattcgtagcaaac 27245996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 55; Significance: 4e-22; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 20465 - 20579
Alignment:
Q  133 aaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcatagtggcggctaaaaccgccggaatatacatttt 232  Q
    |||| |||||||||||| ||||||||| | ||||||||||||||||  || |||||||| ||| ||||| |||||||||||| ||||||| || ||  ||    
T  20465 aaaccgccgctttaaactttgtggcagacaaaatttcggcagttttgaaaccgccagaaatgtacatagcggcggctaaaactgccggaacatccaaatt 20564  T
Q  233 ttagccgccggaaaa 247  Q
    |||||||||||||||    
T  20565 ttagccgccggaaaa 20579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 55; Significance: 4e-22; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 18199 - 18085
Alignment:
Q  133 aaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcatagtggcggctaaaaccgccggaatatacatttt 232  Q
    |||| |||||||||||| |||||| || | ||||||||||||||||  || |||||||| ||| |||||||||||||||||| ||||||| || ||  ||    
T  18199 aaaccgccgctttaaactttgtggtagacaaaatttcggcagttttgaaaccgccagaaatgtacatagtggcggctaaaactgccggaacatccaaatt 18100  T
Q  233 ttagccgccggaaaa 247  Q
    |||||||||||||||    
T  18099 ttagccgccggaaaa 18085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 50; Significance: 4e-19; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 267 - 356
Target Start/End: Original strand, 106191 - 106279
Alignment:
Q  267 aacaaacataaaatagattctaattttttaaagaatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacgggc 356  Q
    |||||||  |||||||||||| |||||| | | |||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||    
T  106191 aacaaacgcaaaatagattctgatttttcataaaatctctaaattattttatgtcaaaatcactttta-tttaatctgtaacaaacgggc 106279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 308 - 352
Target Start/End: Complemental strand, 205165 - 205121
Alignment:
Q  308 aattattttatgtcgaaatcacttttattttaatccgtaacaaac 352  Q
    |||||||||||||| |||||||| | |||||||||||||||||||    
T  205165 aattattttatgtcaaaatcactatcattttaatccgtaacaaac 205121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 46; Significance: 9e-17; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 300 - 353
Target Start/End: Original strand, 71534 - 71587
Alignment:
Q  300 aatctctaaattattttatgtcgaaatcacttttattttaatccgtaacaaacg 353  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  71534 aatctctaaattattttatgtcaaaatcacttttattttaatccataacaaacg 71587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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