View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1755-Insertion-7 (Length: 849)
Name: NF1755-Insertion-7
Description: NF1755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1755-Insertion-7 |
 | |
|
| [»] scaffold0271 (2 HSPs) |
| | |
|
| [»] scaffold0640 (2 HSPs) |
| | |
|
| [»] scaffold0648 (2 HSPs) |
| | |
|
| [»] scaffold0274 (4 HSPs) |
| | |
|
Alignment Details
Target: scaffold0271 (Bit Score: 528; Significance: 0; HSPs: 2)
Name: scaffold0271
Description:
Target: scaffold0271; HSP #1
Raw Score: 528; E-Value: 0
Query Start/End: Original strand, 7 - 578
Target Start/End: Original strand, 11639 - 12210
Alignment:
| Q |
7 |
aataataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaa |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11639 |
aataataagttttgtggtgaaattcctcagagcatgtctcacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaa |
11738 |
T |
|
| Q |
107 |
tggggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaatcc |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| || |||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
11739 |
tggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcagaactcctcttaaaagctgtaccacaaaagaagaaaatcc |
11838 |
T |
|
| Q |
207 |
taaaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgaggg |
306 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |
|
|
| T |
11839 |
taaaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatggggattggatttgcagttggtttctggggg |
11938 |
T |
|
| Q |
307 |
attttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagt |
406 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11939 |
attttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagt |
12038 |
T |
|
| Q |
407 |
taaacaactttgacagattatggagtgggtgacctactttaaaagttaaaccagaatctaaatgagttgcattgttttgagatcaaatgtgttagttaac |
506 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
12039 |
taaacaactttgacagattatggagtgggtgacctactataaaagttaaaccagaatctaaatgagttgcgttgttttgagatcaaatgtgttagttaac |
12138 |
T |
|
| Q |
507 |
ttacatggtgcgtgaaatactcttaagttcaatactattatgtgcttcatcgaaaatcgagataaattcatg |
578 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12139 |
ttacatggtgcgtgaaatactcttaagttcaatactattatgtgcttcatcgaaaatcgagataaattcatg |
12210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0271; HSP #2
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 656 - 849
Target Start/End: Original strand, 12288 - 12481
Alignment:
| Q |
656 |
ctatatcctgagtcatgacagatcatcatgttctcaaaattactcagcccaaccatgtgtaaattcaagcataactttcagcancatcaatttgatttga |
755 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
12288 |
ctatatcctgagtcatgacatattatcatgttctcaaaattactcagcccaaccacgtgtaaattcaagcataactttcagcagcatcaatttgatttga |
12387 |
T |
|
| Q |
756 |
gataagataagtttgtgtaaaactaagctaaggnctttttgtctatacntttgtgtgcatttgaataatgctcatttaanttgcataatgctga |
849 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
12388 |
gataagataagtttgtgtaaaactaagctaagatctctttgtctatacatttgtgtgcatttgaataatgctcatttaatttgcataatgctga |
12481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0640 (Bit Score: 526; Significance: 0; HSPs: 2)
Name: scaffold0640
Description:
Target: scaffold0640; HSP #1
Raw Score: 526; E-Value: 0
Query Start/End: Original strand, 7 - 578
Target Start/End: Original strand, 6544 - 7112
Alignment:
| Q |
7 |
aataataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaa |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6544 |
aataataagttttgtggtgaaattcctcagagcatgtctcacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaa |
6643 |
T |
|
| Q |
107 |
tggggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaatcc |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||| |||||||| |
|
|
| T |
6644 |
tggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaaactgtaccacagaa---gaaaatcc |
6740 |
T |
|
| Q |
207 |
taaaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgaggg |
306 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |
|
|
| T |
6741 |
tataactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatggggattggatttgcagttggtttctggggg |
6840 |
T |
|
| Q |
307 |
attttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagt |
406 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6841 |
attttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagt |
6940 |
T |
|
| Q |
407 |
taaacaactttgacagattatggagtgggtgacctactttaaaagttaaaccagaatctaaatgagttgcattgttttgagatcaaatgtgttagttaac |
506 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
6941 |
taaacaactttgacagattatggagtgggtgacctactttaaaagttaaaccagaatctaaatgagttgcgttgttttgagatcaaatgtgttagttaac |
7040 |
T |
|
| Q |
507 |
ttacatggtgcgtgaaatactcttaagttcaatactattatgtgcttcatcgaaaatcgagataaattcatg |
578 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7041 |
ttacatggtgcgtgaaatactcttaagttcaatactattatgtgcttcatcgaaaatcgagataaattcatg |
7112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0640; HSP #2
Raw Score: 174; E-Value: 4e-93
Query Start/End: Original strand, 656 - 849
Target Start/End: Original strand, 7190 - 7383
Alignment:
| Q |
656 |
ctatatcctgagtcatgacagatcatcatgttctcaaaattactcagcccaaccatgtgtaaattcaagcataactttcagcancatcaatttgatttga |
755 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
7190 |
ctatatactgagtcatgacagatcatcatgttctcaaaattactcagcccaaccatgtgtaaattcaagcataactttcagcagcatcaatttgatttga |
7289 |
T |
|
| Q |
756 |
gataagataagtttgtgtaaaactaagctaaggnctttttgtctatacntttgtgtgcatttgaataatgctcatttaanttgcataatgctga |
849 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
7290 |
gataagataagtttgtgtaaaactaagctaaggtctctttgtctatacatttgtgtgcatttgaataatgctcatttaatttgcataatgctga |
7383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0648 (Bit Score: 514; Significance: 0; HSPs: 2)
Name: scaffold0648
Description:
Target: scaffold0648; HSP #1
Raw Score: 514; E-Value: 0
Query Start/End: Original strand, 7 - 578
Target Start/End: Complemental strand, 2963 - 2390
Alignment:
| Q |
7 |
aataataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaa |
106 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2963 |
aataataagttttgtggtgaaattcctcggagcatgtctcacttaaactttttgggttatttgaacttatcttgcaacaattttaacggaactataccaa |
2864 |
T |
|
| Q |
107 |
-tggggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaatc |
205 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||| |||||||||||||||||||| |
|
|
| T |
2863 |
atggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaaactataccacagaagaagaaaatc |
2764 |
T |
|
| Q |
206 |
ctaaaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgagg |
305 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
2763 |
ctaaaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgggg |
2664 |
T |
|
| Q |
306 |
g-attttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaa |
404 |
Q |
| |
|
| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2663 |
gtatttttggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaa |
2564 |
T |
|
| Q |
405 |
gttaaacaactttgacagattatggagtgggtgacctactttaaaagttaaaccagaatctaaatgagttgcattgttttgagatcaaatgtgttagtta |
504 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
2563 |
gttaaacaactttgacagattatggagtgggtgacctactataaaagttaaaccagaatctaaatgagttgcgttgttttgagatcaaatgtgttagtta |
2464 |
T |
|
| Q |
505 |
acttacatggtgcgtgaaatactcttaagttcaatactattatgtgcttcatcgaaaatcgagataaattcatg |
578 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2463 |
acttacatggtgcgtgaaatactcttaagttcaatactattatgtgcttcatcgaaaatcgagataaattcatg |
2390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0648; HSP #2
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 656 - 849
Target Start/End: Complemental strand, 2312 - 2118
Alignment:
| Q |
656 |
ctatatcctgagtcatgacagat-catcatgttctcaaaattactcagcccaaccatgtgtaaattcaagcataactttcagcancatcaatttgatttg |
754 |
Q |
| |
|
|||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
2312 |
ctatatactgagtcatgacatattcatcatgttctcaaaattactcagcccaaccatgtgtaaattcaagcataactttcagcagcatcaatttgatttg |
2213 |
T |
|
| Q |
755 |
agataagataagtttgtgtaaaactaagctaaggnctttttgtctatacntttgtgtgcatttgaataatgctcatttaanttgcataatgctga |
849 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
2212 |
agataagataagtttgtgtaaaactaagctaaggtctctttgtctatacatttgtgtgcatttgaataatgctcatttaatttgcataatgctga |
2118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0274 (Bit Score: 509; Significance: 0; HSPs: 4)
Name: scaffold0274
Description:
Target: scaffold0274; HSP #1
Raw Score: 509; E-Value: 0
Query Start/End: Original strand, 7 - 578
Target Start/End: Original strand, 21723 - 22294
Alignment:
| Q |
7 |
aataataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaa |
106 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21723 |
aataataagttttgtggtgaaattcctcggagcatgtctcacttaaactttttgggttatttgaacttatcttgcaacaattttaacggaactataccaa |
21822 |
T |
|
| Q |
107 |
-tggggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaatc |
205 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||| |||||||||||||||||||| |
|
|
| T |
21823 |
atggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaaactataccacagaagaagaaaatc |
21922 |
T |
|
| Q |
206 |
ctaaaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgagg |
305 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
21923 |
ctaaaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgggg |
22022 |
T |
|
| Q |
306 |
gattttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaag |
405 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22023 |
gatttttggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaag |
22122 |
T |
|
| Q |
406 |
ttaaacaactttgacagattatggagtgggtgacctactttaaaagttaaaccagaatctaaatgagttgcattgttttgagatcaaatgtgttagttaa |
505 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
22123 |
ttaaacaactttgacagattatggagtgggtgacctactataaaagttaaaccagaatctaaatgagttgcgttgttttgagatcaaatgtgttagttaa |
22222 |
T |
|
| Q |
506 |
cttacatggtgcgtgaaatactcttaagttcaatactattatgtgcttcatcgaaaatcgagataaattcatg |
578 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22223 |
cttacatggtgcgtgaaatactc-taagttcaatattattatgtgcttcatcgaaaatcgagataaattcatg |
22294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0274; HSP #2
Raw Score: 493; E-Value: 0
Query Start/End: Original strand, 7 - 578
Target Start/End: Complemental strand, 2432 - 1862
Alignment:
| Q |
7 |
aataataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggtt-atttgaacttatcttgcaacaattttaacggaactatacca |
105 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2432 |
aataataagttttgtggtgaaattcctcggagcatgtctcacttaaacttcttgggtttatttgaacttatcttgcaacaattttaacggaactatacca |
2333 |
T |
|
| Q |
106 |
a-tggggactcaacttcaaagtttt-aatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaa |
203 |
Q |
| |
|
| ||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||| || |
|
|
| T |
2332 |
aatggggactcaacttcaaagtttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaaactgtaccacagaagaa---aa |
2236 |
T |
|
| Q |
204 |
tcctaaaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctga |
303 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
2235 |
tcctataactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatggggattggatttgcagttggtttctgg |
2136 |
T |
|
| Q |
304 |
gggattttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaa |
403 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2135 |
gggattttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaa |
2036 |
T |
|
| Q |
404 |
agttaaacaactttgacagattatggagtgggtgacctactttaaaagttaaaccagaatctaaatgagttgcattgttttgagatcaaatgtgttagtt |
503 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
2035 |
agttaaacaactttgacagattatggagtgggtgacctactttaaaagttaaaccagaatctaaatgagttgcgttgttttgagatcaaatgtgttagtt |
1936 |
T |
|
| Q |
504 |
aacttacatggtgcgtgaaatactcttaagttcaatactattatgtgcttcatcgaaaatcgagataaattcatg |
578 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1935 |
aacttacatggtgcgtgaaatactc-taagttcaatactattatgtgcttcatcgaaaatcgagataaattcatg |
1862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0274; HSP #3
Raw Score: 174; E-Value: 4e-93
Query Start/End: Original strand, 656 - 849
Target Start/End: Complemental strand, 1784 - 1591
Alignment:
| Q |
656 |
ctatatcctgagtcatgacagatcatcatgttctcaaaattactcagcccaaccatgtgtaaattcaagcataactttcagcancatcaatttgatttga |
755 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
1784 |
ctatatactgagtcatgacagatcatcatgttctcaaaattactcagcccaaccatgtgtaaattcaagcataactttcagcagcatcaatttgatttga |
1685 |
T |
|
| Q |
756 |
gataagataagtttgtgtaaaactaagctaaggnctttttgtctatacntttgtgtgcatttgaataatgctcatttaanttgcataatgctga |
849 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
1684 |
gataagataagtttgtgtaaaactaagctaaggtctctttgtctatacatttgtgtgcatttgaataatgctcatttaatttgcataatgctga |
1591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0274; HSP #4
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 656 - 849
Target Start/End: Original strand, 22372 - 22565
Alignment:
| Q |
656 |
ctatatcctgagtcatgacagatcatcatgttctcaaaattactcagcccaaccatgtgtaaattcaagcataactttcagcancatcaatttgatttga |
755 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
22372 |
ctatatcctgagtcatgacatattatcatgttctcaaaattactcagcccaaccacgtgtaaattcaagcataactttcagcagcatcaatttgatttga |
22471 |
T |
|
| Q |
756 |
gataagataagtttgtgtaaaactaagctaaggnctttttgtctatacntttgtgtgcatttgaataatgctcatttaanttgcataatgctga |
849 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
22472 |
gataagataagtttgtgtaaaactaagctaaggtctctttgtctatacatttgtgtgcatttgaataatgctcatttaatttgcataatgctga |
22565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 193; Significance: 1e-104; HSPs: 28)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 6 - 410
Target Start/End: Original strand, 19394286 - 19394690
Alignment:
| Q |
6 |
caataataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactatacca |
105 |
Q |
| |
|
|||||||||||||| ||||||||||||||| |||||| || ||||||||| |||||||||||||| |||||| |||||||||| |||||| || ||| |
|
|
| T |
19394286 |
caataataagttttatggtgaaattcctcaaagcatggctctcttaaactttttgggttatttgaatctatcttacaacaattttgacggaaaaatccca |
19394385 |
T |
|
| Q |
106 |
atggggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaatc |
205 |
Q |
| |
|
|| || ||||||||||||||||||||||||||||| ||||||| | ||| ||| |||| |||||||| |||| || |||||| ||||||||||||||| |
|
|
| T |
19394386 |
ataggaactcaacttcaaagttttaatgcatcgagttatattgggaatcctaaactatgtggagctccacttagtaattgtaccgcagaagaagaaaatc |
19394485 |
T |
|
| Q |
206 |
ctaaaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgagg |
305 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||| |||||| |||||| ||||||||||| || ||||| |||||||||||||| |||||||| || |
|
|
| T |
19394486 |
ctaaaactgcaaagccatctacagagaatgaagatgaagactctataaaagaatcattgtatctagggatgggagttggatttgcagtaggtttctgggg |
19394585 |
T |
|
| Q |
306 |
gattttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaag |
405 |
Q |
| |
|
||||| |||||||||||||| |||| |||||||||||||||| || |||| |||| || |||| ||||||||||||||||||| || || |||||| |
|
|
| T |
19394586 |
gatttgtggttctttgtttcttattaggaaatggaggcatgcatgctttcgggttatatatggagtaggtgacaagctctatgttattttgacggtaaag |
19394685 |
T |
|
| Q |
406 |
ttaaa |
410 |
Q |
| |
|
||||| |
|
|
| T |
19394686 |
ttaaa |
19394690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 9 - 411
Target Start/End: Original strand, 19354855 - 19355257
Alignment:
| Q |
9 |
taataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaatg |
108 |
Q |
| |
|
||||||||||| |||||| |||||||||||||||||| ||||| ||| || ||||||||||| ||||||| |||||||||| |||||| || ||||| |
|
|
| T |
19354855 |
taataagttttatggtgacattcctcagagcatgtctctcttaacctttttaggttatttgaatttatcttacaacaattttgacggaaaaatcccaata |
19354954 |
T |
|
| Q |
109 |
gggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaatccta |
208 |
Q |
| |
|
|| |||||||||||||||||||||||||| || || ||| | ||| ||| |||||||||||||||| || || ||||||| ||||||||||||||| |
|
|
| T |
19354955 |
ggaactcaacttcaaagttttaatgcatcaagttacgttggaaatcctaaactatgcggagctcctctcaataattgtaccaagaaagaagaaaatccta |
19355054 |
T |
|
| Q |
209 |
aaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgagggat |
308 |
Q |
| |
|
||||||||| ||||| |||| | ||||||||||| |||||| ||||| ||||||||||| |||||||| |||||||||||||| |||||||| ||||| |
|
|
| T |
19355055 |
aaactgcaatgccatctacaaaaaatgaagatgacgactctatcaaagaatcattgtatctaggcatgggagttggatttgcagtaggtttctgggggat |
19355154 |
T |
|
| Q |
309 |
tttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagtta |
408 |
Q |
| |
|
|| | ||||||||||||| |||| |||||||||||||||||||| ||||||| ||||||||||| |||||||| |||||||||||| ||| ||||||||| |
|
|
| T |
19355155 |
ttgccgttctttgtttctaattagaaaatggaggcatgcatactttcggtttgttgatagagtgcgtgacaagatctatgttactttgatcgtaaagtta |
19355254 |
T |
|
| Q |
409 |
aac |
411 |
Q |
| |
|
||| |
|
|
| T |
19355255 |
aac |
19355257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 7 - 410
Target Start/End: Original strand, 17943092 - 17943495
Alignment:
| Q |
7 |
aataataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaa |
106 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| || |||||| || ||||| ||||| ||||||||||| |||||| | |||| || |||| |
|
|
| T |
17943092 |
aataataagttttttggtgaaattcctcagagcatggctctcttaaattttttgggggtgttgaatttatcttgcaataattttgatggaaaaatcccaa |
17943191 |
T |
|
| Q |
107 |
tggggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaatcc |
206 |
Q |
| |
|
| || ||||||||||||||||||||||||||||| || |||| | ||| ||| |||| |||||||||||||| || |||||||| ||||||||||||| |
|
|
| T |
17943192 |
ttggaactcaacttcaaagttttaatgcatcgagttacattgggaatcctaaactatgtggagctcctcttaataattgtaccacgaaagaagaaaatcc |
17943291 |
T |
|
| Q |
207 |
taaaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgaggg |
306 |
Q |
| |
|
||||||||||||||| | |||||||||||||||||||||||| |||||| ||| |||| ||||||||||||||||||||||||| ||||| || ||| |
|
|
| T |
17943292 |
taaaactgcaaagccgtccacagagaatgaagatgatgactctataaaagaatcactgtaccttggcatgggggttggatttgcagcaggtttttggggg |
17943391 |
T |
|
| Q |
307 |
attttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagt |
406 |
Q |
| |
|
|||| |||||||||||| | |||| ||||||||||||||||| || ||||||||||||||||||||| ||||| ||||||||||||| ||| ||||||| |
|
|
| T |
17943392 |
atttgtggttctttgttttttattagaaaatggaggcatgcatgctttcggtttattgatagagtgggcgacaaactctatgttactttgatcgtaaagt |
17943491 |
T |
|
| Q |
407 |
taaa |
410 |
Q |
| |
|
|||| |
|
|
| T |
17943492 |
taaa |
17943495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 7 - 411
Target Start/End: Original strand, 19425828 - 19426232
Alignment:
| Q |
7 |
aataataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaa |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||| |||||| ||||||||||| ||||| ||||||| || |||| |
|
|
| T |
19425828 |
aataataagttttgtggtgaaattcctcagagcatgtctgtcttaacctttttgggttttttgaatttatcttgcaataatttaaacggaaaaatcccaa |
19425927 |
T |
|
| Q |
107 |
tggggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaatcc |
206 |
Q |
| |
|
|| || ||||||||||| ||||||||||||| || |||| | ||| ||| |||||||||||||||| || || ||||||| ||||||||||||| |
|
|
| T |
19425928 |
ctggaacacaacttcaaagaattaatgcatcgagttacattgggaatcctaaactatgcggagctcctctcaataattgtaccatgaaagaagaaaatcc |
19426027 |
T |
|
| Q |
207 |
taaaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgaggg |
306 |
Q |
| |
|
||||||||||| |||| |||| |||||||||||||||||||| ||||| ||||||||||| || ||||| |||||||||||||| |||||||| ||| |
|
|
| T |
19426028 |
taaaactgcaacaccatctacaaagaatgaagatgatgactctatcaaagaatcattgtatctagggatgggagttggatttgcagtaggtttctggggg |
19426127 |
T |
|
| Q |
307 |
attttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagt |
406 |
Q |
| |
|
|||| ||||||||||| || |||| |||||||| ||||||||||| ||||||| ||||||||||| |||| ||| |||||||||||| ||| ||||||| |
|
|
| T |
19426128 |
atttgtggttctttgttccttattagaaaatggaagcatgcatactttcggtttgttgatagagtgcgtgataagatctatgttactttgatcgtaaagt |
19426227 |
T |
|
| Q |
407 |
taaac |
411 |
Q |
| |
|
||||| |
|
|
| T |
19426228 |
taaac |
19426232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 182; E-Value: 6e-98
Query Start/End: Original strand, 9 - 418
Target Start/End: Complemental strand, 14895250 - 14894841
Alignment:
| Q |
9 |
taataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaatg |
108 |
Q |
| |
|
||||||||||| |||||||||||| |||||||||||| ||||| || |||||||||||||| ||||||| |||||||||| |||||| || |||| |
|
|
| T |
14895250 |
taataagttttatggtgaaattccgcagagcatgtctctcttaacatttttgggttatttgaatttatcttacaacaattttgacggaaaaattccaaca |
14895151 |
T |
|
| Q |
109 |
gggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaatccta |
208 |
Q |
| |
|
|| |||||||||||||||||||||| ||||||||| |||| | ||| ||| |||||||||||||| | | || ||||||||||||||||||||||||| |
|
|
| T |
14895150 |
ggaactcaacttcaaagttttaatgaatcgagctacattggaaatcctaaactatgcggagctcctgtaaccaattgtaccacagaagaagaaaatccta |
14895051 |
T |
|
| Q |
209 |
aaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgagggat |
308 |
Q |
| |
|
| |||| |||||| | |||| ||| |||||| || |||||| || ||| ||| |||||||||||||||| ||||||||||||| ||||| || ||||| |
|
|
| T |
14895050 |
acactgaaaagccttttacacagattgaagacgaggactctataagagaatcaatgtatcttggcatgggaattggatttgcagtaggtttttgggggat |
14894951 |
T |
|
| Q |
309 |
tttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagtta |
408 |
Q |
| |
|
|| |||||||||||||| |||| |||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||| ||| ||||||| |
|
|
| T |
14894950 |
ttctggttctttgtttcttattagaaaatggaggcatgcatactttcggtttattgatggagtaggtgacaagctctatgttactttgatcccaaagtta |
14894851 |
T |
|
| Q |
409 |
aacaactttg |
418 |
Q |
| |
|
|||||||||| |
|
|
| T |
14894850 |
aacaactttg |
14894841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 10 - 410
Target Start/End: Complemental strand, 17726396 - 17725996
Alignment:
| Q |
10 |
aataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaatgg |
109 |
Q |
| |
|
||||| |||| ||||||||||||||||||||||||| ||| |||| |||||||||||||| ||||||| |||||| ||| | |||| || ||||| | |
|
|
| T |
17726396 |
aataatttttctggtgaaattcctcagagcatgtcttcgttacactttttgggttatttgaatttatcttacaacaagtttgatggaaaaatcccaatag |
17726297 |
T |
|
| Q |
110 |
ggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaatcctaa |
209 |
Q |
| |
|
| ||||||||||||||||||||||||||||| ||||||| | || | ||||||||||||||||||| || ||||||| |||||||||||||||||| |
|
|
| T |
17726296 |
gaactcaacttcaaagttttaatgcatcgagttatattgggaatcattatctatgcggagctcctcttaataattgtaccatagaagaagaaaatcctaa |
17726197 |
T |
|
| Q |
210 |
aactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgagggatt |
309 |
Q |
| |
|
|| | ||||| | |||| |||||||||||||||||||| ||||| ||||||||||| || ||||| |||||||||||||| |||||||| |||||| |
|
|
| T |
17726196 |
aaattcaaagttgtctacaaagaatgaagatgatgactctatcaaagaatcattgtatctagggatgggagttggatttgcagtaggtttctgggggatt |
17726097 |
T |
|
| Q |
310 |
ttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagttaa |
409 |
Q |
| |
|
| |||||||||||||| |||| |||||||||||||||||||| | ||||||||||| |||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
17726096 |
tgtggttctttgtttcttattagaaaatggaggcatgcatacttttggtttattgatggagtaggtgacaagctctatgttactttaattgtaaagttaa |
17725997 |
T |
|
| Q |
410 |
a |
410 |
Q |
| |
|
| |
|
|
| T |
17725996 |
a |
17725996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 10 - 410
Target Start/End: Complemental strand, 19027625 - 19027225
Alignment:
| Q |
10 |
aataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaatgg |
109 |
Q |
| |
|
||||| |||| ||||||||||||||||||||||||| ||| |||| |||||||||||||| ||||||| |||||| ||| | |||| || ||||| | |
|
|
| T |
19027625 |
aataatttttctggtgaaattcctcagagcatgtcttcgttacactttttgggttatttgaatttatcttacaacaagtttgatggaaaaatcccaatag |
19027526 |
T |
|
| Q |
110 |
ggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaatcctaa |
209 |
Q |
| |
|
| ||||||||||||||||||||||||||||| ||||||| | || | ||||||||||||||||||| || ||||||| |||||||||||||||||| |
|
|
| T |
19027525 |
gaactcaacttcaaagttttaatgcatcgagttatattgggaatcattatctatgcggagctcctcttaataattgtaccatagaagaagaaaatcctaa |
19027426 |
T |
|
| Q |
210 |
aactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgagggatt |
309 |
Q |
| |
|
|| | ||||| | |||| |||||||||||||||||||| ||||| ||||||||||| || ||||| |||||||||||||| |||||||| |||||| |
|
|
| T |
19027425 |
aaattcaaagttgtctacaaagaatgaagatgatgactctatcaaagaatcattgtatctagggatgggagttggatttgcagtaggtttctgggggatt |
19027326 |
T |
|
| Q |
310 |
ttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagttaa |
409 |
Q |
| |
|
| |||||||||||||| |||| |||||||||||||||||||| | ||||||||||| |||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
19027325 |
tgtggttctttgtttcttattagaaaatggaggcatgcatacttttggtttattgatggagtaggtgacaagctctatgttactttaattgtaaagttaa |
19027226 |
T |
|
| Q |
410 |
a |
410 |
Q |
| |
|
| |
|
|
| T |
19027225 |
a |
19027225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 9 - 410
Target Start/End: Original strand, 18166296 - 18166697
Alignment:
| Q |
9 |
taataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaatg |
108 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| ||| ||||| ||| || ||||||||||| ||||||| ||| || ||| |||||| || ||||| |
|
|
| T |
18166296 |
taataagttttatggtgaaattcctcagagcatctctctcttaacctttttaggttatttgaatttatcttacaataactttgacggaataatcccaata |
18166395 |
T |
|
| Q |
109 |
gggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaatccta |
208 |
Q |
| |
|
|| |||||||||||||||||||||||||| || ||||||| | ||| ||| |||| ||||||||||||| || ||||||||| ||||| ||||| ||| |
|
|
| T |
18166396 |
ggaactcaacttcaaagttttaatgcatcaagttatattgagaatcctaaactatgtggagctcctcttagtaattgtaccacaaaagaaaaaaattcta |
18166495 |
T |
|
| Q |
209 |
aaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgagggat |
308 |
Q |
| |
|
||||||||| ||| | |||| |||||||||||||||||||| || ||| | ||||| || |||||||| |||||||||||||| |||||||| ||||| |
|
|
| T |
18166496 |
aaactgcaacgccgtctacaaagaatgaagatgatgactctataagagaatggttgtacctaggcatgggagttggatttgcagtaggtttctgggggat |
18166595 |
T |
|
| Q |
309 |
tttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagtta |
408 |
Q |
| |
|
|| |||||||||||||| |||| ||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||| || ||||||||| |
|
|
| T |
18166596 |
ttgtggttctttgtttcttattagaaaatggagacatgcatactttcggtttattgatagagttggtgacaagctctatgttactttgaacgtaaagtta |
18166695 |
T |
|
| Q |
409 |
aa |
410 |
Q |
| |
|
|| |
|
|
| T |
18166696 |
aa |
18166697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 9 - 410
Target Start/End: Complemental strand, 18872738 - 18872337
Alignment:
| Q |
9 |
taataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaatg |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||| ||||||| ||||| |||| | |||| || ||||| |
|
|
| T |
18872738 |
taataagttttgtggtgaaattcctcagagcatgtctctgttacactttatgggttatttgaatttatcttacaacagttttgaaggaaaaattccaatt |
18872639 |
T |
|
| Q |
109 |
gggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaatccta |
208 |
Q |
| |
|
|| ||||||||||||||||||||||||||||| | |||| | ||| ||| ||||||||| |||||| || || ||||||||| ||||||||||||||| |
|
|
| T |
18872638 |
ggaactcaacttcaaagttttaatgcatcgagttgcattgggaatcctaaactatgcggagatcctctcaataattgtaccacaaaagaagaaaatccta |
18872539 |
T |
|
| Q |
209 |
aaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgagggat |
308 |
Q |
| |
|
||||||||||||||| |||| ||||||||||| ||| ||| || ||| ||| |||||||||||||||| |||||||||||||| |||||||| ||||| |
|
|
| T |
18872538 |
aaactgcaaagccatctacaaagaatgaagattatgcttctataagagaatcaatgtatcttggcatgggagttggatttgcagtaggtttctgggggat |
18872439 |
T |
|
| Q |
309 |
tttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagtta |
408 |
Q |
| |
|
|| |||||||||||||| |||| ||||||||||||||||||| | ||||||| || |||| |||||||||||||||||||||| ||| |||||||| |
|
|
| T |
18872438 |
ttgtggttctttgtttcttattaggaaatggaggcatgcatacttttggtttatatatggagtaggtgacaagctctatgttactttgatgataaagtta |
18872339 |
T |
|
| Q |
409 |
aa |
410 |
Q |
| |
|
|| |
|
|
| T |
18872338 |
aa |
18872337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 170; E-Value: 9e-91
Query Start/End: Original strand, 7 - 412
Target Start/End: Original strand, 19335150 - 19335555
Alignment:
| Q |
7 |
aataataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaa |
106 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||||||||| ||||| ||| |||||||||||||| ||||||| ||||| |||| | |||| || |||| |
|
|
| T |
19335150 |
aataataagttttatggtgaaattcctcggagcatgtctgtcttaacctttttgggttatttgaatttatcttacaacagttttgaaggaaaaatcccaa |
19335249 |
T |
|
| Q |
107 |
tggggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaatcc |
206 |
Q |
| |
|
|| || |||||||||||||||||||||||||| || |||| | ||| ||| | |||||||||||||| || || ||||||| ||||||||||||| |
|
|
| T |
19335250 |
ctggaacacaacttcaaagttttaatgcatcgagttacattgggaatcctaaactgtgcggagctcctctcaataattgtaccatgaaagaagaaaatcc |
19335349 |
T |
|
| Q |
207 |
taaaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgaggg |
306 |
Q |
| |
|
||||||||||| ||||| ||||| ||||||||||| |||||| || ||| ||||||||||| || ||| | ||||||||||||| |||||||| ||| |
|
|
| T |
19335350 |
taaaactgcaatgccatcaacagataatgaagatgacgactctttaagagaatcattgtatctagggatgagagttggatttgcagcaggtttctggggg |
19335449 |
T |
|
| Q |
307 |
attttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagt |
406 |
Q |
| |
|
|||| |||||||||||||| |||| ||||||||||||||| |||| ||||||| || ||||||||||||||||| |||||||||||| ||| ||||||| |
|
|
| T |
19335450 |
atttgtggttctttgtttcttattagaaaatggaggcatgcttactttcggtttgtttatagagtgggtgacaagatctatgttactttgatcgtaaagt |
19335549 |
T |
|
| Q |
407 |
taaaca |
412 |
Q |
| |
|
| |||| |
|
|
| T |
19335550 |
tgaaca |
19335555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 7 - 417
Target Start/End: Original strand, 25464188 - 25464601
Alignment:
| Q |
7 |
aataataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaa |
106 |
Q |
| |
|
||||| ||| ||||||||| ||||||||| ||| || | ||||||||| ||| |||||||||| ||||||| |||||||||| | |||| || |||| |
|
|
| T |
25464188 |
aataacaagctttgtggtggaattcctcaaagcctggttctcttaaactttttgagttatttgaatttatcttacaacaattttgatggaaaaatcccaa |
25464287 |
T |
|
| Q |
107 |
tggggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaatcc |
206 |
Q |
| |
|
| || |||||||||||||||||||||||||||||||| |||| || |||||||||||||||| |||||||||| | ||||||||| ||||||||||||| |
|
|
| T |
25464288 |
taggaactcaacttcaaagttttaatgcatcgagctacattggcaatccaaaattatgcggacttcctcttaaagagtgtaccacaaaagaagaaaatcc |
25464387 |
T |
|
| Q |
207 |
taaaactgcaaagccatatacagagaatgaagat---gatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctga |
303 |
Q |
| |
|
||||| ||||| || | | || ||| ||||||| ||||||||| |||||| ||||||||||| ||| |||| |||||||||||| | |||||||| |
|
|
| T |
25464388 |
taaaaatgcaacaccgtctgcaaagagtgaagataacgatgactctataaaagaatcattgtatctaggcttgggagttggatttgcaataggtttctgg |
25464487 |
T |
|
| Q |
304 |
gggattttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaa |
403 |
Q |
| |
|
||||||| |||||||||||| | |||| ||||||||||||||||||| |||||||||| || ||||| ||||||| ||||||||||||| ||| |||| |
|
|
| T |
25464488 |
gggatttgtggttctttgttttttattaggaaatggaggcatgcatactttcggtttattaatggagtgagtgacaaactctatgttactttgatcgtaa |
25464587 |
T |
|
| Q |
404 |
agttaaacaacttt |
417 |
Q |
| |
|
|||||||| ||||| |
|
|
| T |
25464588 |
agttaaaccacttt |
25464601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 7 - 423
Target Start/End: Original strand, 16678348 - 16678761
Alignment:
| Q |
7 |
aataataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaa |
106 |
Q |
| |
|
||||||||||||| |||||||||||||||||| |||| ||||||||| |||||||||||||| || ||||||||||||||| |||||| || || | |
|
|
| T |
16678348 |
aataataagttttctggtgaaattcctcagagtgcgtctctcttaaactttttgggttatttgaatttgtcttgcaacaattttgacggaaaaatcccga |
16678447 |
T |
|
| Q |
107 |
tggggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaatcc |
206 |
Q |
| |
|
| || |||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||| |||||||||||||| | |||||||||| |
|
|
| T |
16678448 |
taggaactcaacttcaaagttttaatgcatcgagctacattggcaatccaaaattatgcggagctcctctcaaaaactgtaccac---aaaagaaaatcc |
16678544 |
T |
|
| Q |
207 |
taaaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgaggg |
306 |
Q |
| |
|
||||| ||| |||| |||||| | ||||||| |||| || |||||| ||||||||||| ||| |||| ||||| ||||| || |||||||| || |
|
|
| T |
16678545 |
taaaaacacaacaccatctacagaaagtgaagataatgatactctaaaagaatcattgtatctgggcttgggagttggttttgcggtaggtttctggggt |
16678644 |
T |
|
| Q |
307 |
attttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagt |
406 |
Q |
| |
|
|||| |||||||||||||| |||| ||||||||||| ||||||||| ||||||||| ||||||| |||||||| ||||| |||| ||| ||||||| |
|
|
| T |
16678645 |
atttgtggttctttgtttcttattaggaaatggaggcacacatactatcaatttattgatggagtgggcgacaagctgtatgtaactttgatggtaaagt |
16678744 |
T |
|
| Q |
407 |
taaacaactttgacaga |
423 |
Q |
| |
|
|||| |||||| ||||| |
|
|
| T |
16678745 |
taaataactttcacaga |
16678761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 7 - 410
Target Start/End: Original strand, 18117106 - 18117497
Alignment:
| Q |
7 |
aataataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaa |
106 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||| ||||| || |||||||||||||| ||||| | ||| |||||| |||||| || |||| |
|
|
| T |
18117106 |
aataataagctttgtggtgaaattcctcagagcatgtctctcttaacttttttgggttatttgaatttatcatacaataattttgacggaaaaatcccaa |
18117205 |
T |
|
| Q |
107 |
tggggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaatcc |
206 |
Q |
| |
|
| | || ||||||||||||||||||||||| ||||| |||| || ||||||||||||||| ||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
18117206 |
tagcaacgcaacttcaaagttttaatgcatcaagctacattggcaatccaaaattatgcggcgctcctcttaataactgtaccacggaagaagaaaatcc |
18117305 |
T |
|
| Q |
207 |
taaaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgaggg |
306 |
Q |
| |
|
| || |||||||||||||||||||||| ||| || ||||||||||||||| |||||||| || ||||||||||| |||||||| ||| |
|
|
| T |
18117306 |
tggaa------------atacagagaatgaagatgatgaatctataagagagtcattgtatctaggcatgggagtgggatttgcagtaggtttctggggg |
18117393 |
T |
|
| Q |
307 |
attttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagt |
406 |
Q |
| |
|
|||| |||||| ||||||| |||| |||||||||||||| |||| |||||| ||||||||||||||||| | ||||||||||||| ||| ||||||| |
|
|
| T |
18117394 |
atttgtggttctatgtttcttattaggaaatggaggcatgcgtactttcggttagttgatagagtgggtgactatctctatgttactttgatcgtaaagt |
18117493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 9 - 412
Target Start/End: Original strand, 19376762 - 19377162
Alignment:
| Q |
9 |
taataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaatg |
108 |
Q |
| |
|
||||||||||| ||||||||||||||||| ||||||| ||||| ||| |||||||||||||| |||||| |||||||||| | |||| || ||||| |
|
|
| T |
19376762 |
taataagttttatggtgaaattcctcagaccatgtctatcttaacctttttgggttatttgaatctatcttacaacaattttgatggaaaaattccaata |
19376861 |
T |
|
| Q |
109 |
gggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaatccta |
208 |
Q |
| |
|
|| ||||||||||||||||||||||||||||| || |||| | ||| ||| ||||||||||||||||||| || |||||| ||||||||||| ||| |
|
|
| T |
19376862 |
ggaactcaacttcaaagttttaatgcatcgagttacattgggaatcctaaactatgcggagctcctcttaataattgtaccgcagaagaagaat---cta |
19376958 |
T |
|
| Q |
209 |
aaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgagggat |
308 |
Q |
| |
|
||| ||||| | || |||| |||||| ||| ||| || || ||| ||||||||||| |||||||| |||||||||||||| |||||||| ||||| |
|
|
| T |
19376959 |
aaaatgcaacacaatctacaaggaatgaggatagtgaatccataagagaatcattgtatctaggcatgggagttggatttgcagtaggtttctgggggat |
19377058 |
T |
|
| Q |
309 |
tttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagtta |
408 |
Q |
| |
|
|| ||||||||||||||| |||| ||||||||||||||||||| || ||||||| ||||||| |||||||| ||||||||||||| ||| ||||||||| |
|
|
| T |
19377059 |
ttgcggttctttgtttcttattaggaaatggaggcatgcatactttcagtttattaatagagtaggtgacaaactctatgttactttgatcgtaaagtta |
19377158 |
T |
|
| Q |
409 |
aaca |
412 |
Q |
| |
|
|||| |
|
|
| T |
19377159 |
aaca |
19377162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 7 - 410
Target Start/End: Original strand, 19382031 - 19382434
Alignment:
| Q |
7 |
aataataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaa |
106 |
Q |
| |
|
||||||||||||| ||||||||||||||| |||||| || ||||||||| |||| ||||| ||||||||||| |||||| | |||| || |||| |
|
|
| T |
19382031 |
aataataagttttttggtgaaattcctcaaagcatggctctcttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaatcccaa |
19382130 |
T |
|
| Q |
107 |
tggggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaatcc |
206 |
Q |
| |
|
|| |||||||||||||||||||||||||| || ||||||| | ||| ||| ||||||||||||||||||| || ||||||| | |||||||||||| |
|
|
| T |
19382131 |
caggaactcaacttcaaagttttaatgcatcaagttatattgggaatcctaaactatgcggagctcctcttaataattgtaccataacagaagaaaatcc |
19382230 |
T |
|
| Q |
207 |
taaaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgaggg |
306 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||||||| ||| || |||||| |||||||| |||||||| |||||||||| ||| ||||| || ||| |
|
|
| T |
19382231 |
taaaactgcactgccatctacagagaatgaagatgatgaatctataatagagtcgttgtatctaggcatgggagttggatttggagtaggtttttggggg |
19382330 |
T |
|
| Q |
307 |
attttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagt |
406 |
Q |
| |
|
|||| |||||||| ||||| |||| ||||||||||||||||||| ||||||||| || |||| ||||||||||||||||||| || || ||||||| |
|
|
| T |
19382331 |
atttgtggttctttatttcttattaggaaatggaggcatgcatactttcggtttatctatggagtaggtgacaagctctatgttattttgacggtaaagt |
19382430 |
T |
|
| Q |
407 |
taaa |
410 |
Q |
| |
|
|||| |
|
|
| T |
19382431 |
taaa |
19382434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 10 - 410
Target Start/End: Original strand, 19456438 - 19456837
Alignment:
| Q |
10 |
aataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaatgg |
109 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| ||||| ||| |||||||||||||| ||||| | ||| |||||| || ||| || || || | |
|
|
| T |
19456438 |
aataagttttgtggtgaaattccacagagcatgtctctcttaacctttttgggttatttgaatttatcatacaataattttgacagaaaaatcccgatag |
19456537 |
T |
|
| Q |
110 |
ggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaatcctaa |
209 |
Q |
| |
|
|| ||||||||||||||||| ||||||||||| |||| | ||||||||||||||||||||||||||| || ||||||| ||||||||||||||||| |
|
|
| T |
19456538 |
caacgcaacttcaaagttttaacgcatcgagctacattggaaatccaaaattatgcggagctcctcttaataattgtaccaaggaagaagaaaatcctaa |
19456637 |
T |
|
| Q |
210 |
aactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgagggatt |
309 |
Q |
| |
|
||||||| |||| ||||||| |||||||||||||||| || ||| ||| ||| ||| ||| |||| |||||||||||||| |||||||| |||||| |
|
|
| T |
19456638 |
gactgcaac-ccatccacagagattgaagatgatgactctataagagaatcaatgtttctcggcttgggagttggatttgcagtaggtttctgggggatt |
19456736 |
T |
|
| Q |
310 |
ttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagttaa |
409 |
Q |
| |
|
| |||||||||||||| |||| ||||||||||||||||||| | || |||| || |||||||| ||| | ||||||| |||| ||| |||||||||| |
|
|
| T |
19456737 |
tgtggttctttgtttcttattaggaaatggaggcatgcatacttttgggttatatatggagtgggtaacagggtctatgtaactttgatggtaaagttaa |
19456836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 7 - 410
Target Start/End: Original strand, 18017160 - 18017563
Alignment:
| Q |
7 |
aataataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaa |
106 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| || ||||||||| ||||| ||||| ||||||||||| |||||| | |||| || |||| |
|
|
| T |
18017160 |
aataataagttttttggtgaaattcctcagagcatggctctcttaaactttttgggggtgttgaatttatcttgcaataattttgatggaaaaatcccaa |
18017259 |
T |
|
| Q |
107 |
tggggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaatcc |
206 |
Q |
| |
|
|| ||||||||||||||| | ||||||| || ||||||| | ||| ||| | ||||| ||||||||||| || ||||||| | |||||||||||| |
|
|
| T |
18017260 |
caggaactcaacttcaaagtcgtgatgcatcaagttatattgggaatcctaaactgtgcggggctcctcttaataattgtaccataacagaagaaaatcc |
18017359 |
T |
|
| Q |
207 |
taaaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgaggg |
306 |
Q |
| |
|
||||||||||| ||||| |||||||||||| |||||||| ||| |||||| ||||||||||| |||||||| ||||| ||||||| |||||||| ||| |
|
|
| T |
18017360 |
taaaactgcaatgccatctacagagaatgaggatgatgaatctataaaagaatcattgtatctaggcatgggagttggctttgcagcaggtttctggggg |
18017459 |
T |
|
| Q |
307 |
attttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagt |
406 |
Q |
| |
|
|||| ||||||||||||||||||| |||||||||||||||||| | ||||||||| || |||||||| ||| || ||||| |||| ||| ||||||| |
|
|
| T |
18017460 |
atttgtggttctttgtttctcattagaaaatggaggcatgcatattttcggtttatatatggagtgggtaacagactttatgtaactttgatggtaaagt |
18017559 |
T |
|
| Q |
407 |
taaa |
410 |
Q |
| |
|
|||| |
|
|
| T |
18017560 |
taaa |
18017563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 7 - 410
Target Start/End: Original strand, 19465491 - 19465893
Alignment:
| Q |
7 |
aataataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaa |
106 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| || || |||||| |||| ||||| ||||||||||| |||||| | |||| || |||| |
|
|
| T |
19465491 |
aataataagttttttggtgaaattcctcagagcatggctctct-aaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaattccaa |
19465589 |
T |
|
| Q |
107 |
tggggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaatcc |
206 |
Q |
| |
|
| || |||||||||||||||||||||| ||| || ||||||| | ||| ||| ||||||||||||||||||| || ||||||| | |||||||||||| |
|
|
| T |
19465590 |
taggaactcaacttcaaagttttaatgtatcaagttatattgggaatcctaaactatgcggagctcctcttaataattgtaccataacagaagaaaatcc |
19465689 |
T |
|
| Q |
207 |
taaaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgaggg |
306 |
Q |
| |
|
|||||||||| ||||| |||||||||||| |||||||| || |||||| ||||||||||| | | ||| ||||||||||||| |||||||| ||| |
|
|
| T |
19465690 |
taaaactgcactgccatctacagagaatgaggatgatgaatcgataaaagaatcattgtatctaaggacgggagttggatttgcagcaggtttctggggg |
19465789 |
T |
|
| Q |
307 |
attttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagt |
406 |
Q |
| |
|
|||| |||||||||||||| |||| ||||||||||||||||||| ||||||||| || || | |||||||||||||||||||||| || ||||||| |
|
|
| T |
19465790 |
atttgtggttctttgtttcttattaggaaatggaggcatgcatactttcggtttatatatggaataggtgacaagctctatgttactttgacggtaaagt |
19465889 |
T |
|
| Q |
407 |
taaa |
410 |
Q |
| |
|
|||| |
|
|
| T |
19465890 |
taaa |
19465893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 7 - 410
Target Start/End: Original strand, 19462330 - 19462721
Alignment:
| Q |
7 |
aataataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaa |
106 |
Q |
| |
|
||||||||| |||||||||||||||||| |||||||||| ||||| || |||||||||||||| ||||| | ||| |||||| |||||| || |||| |
|
|
| T |
19462330 |
aataataagctttgtggtgaaattcctcggagcatgtctctcttaacttttttgggttatttgaatttatcatacaataattttgacggaaaaatcccaa |
19462429 |
T |
|
| Q |
107 |
tggggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaatcc |
206 |
Q |
| |
|
| | || ||||||||||||||||||||||| ||||| |||| || ||||||||||||||| ||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
19462430 |
tagcaacgcaacttcaaagttttaatgcatcaagctacattggcaatccaaaattatgcggtgctcctcttaataactgtaccacggaagaagaaaatcc |
19462529 |
T |
|
| Q |
207 |
taaaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgaggg |
306 |
Q |
| |
|
| || |||||||||||||||||||||| ||| || |||||| |||||| | |||||||| || ||||||||||| |||||||| || |
|
|
| T |
19462530 |
tggaa------------atacagagaatgaagatgatgaatctataagagagtcgttgtatttaggcatgggagtgggatttgcagtaggtttctggggc |
19462617 |
T |
|
| Q |
307 |
attttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagt |
406 |
Q |
| |
|
|||| |||||||||||||| ||| |||||||||||||| |||| |||||| ||||||||||||||||| ||||||||||||| || ||||||| |
|
|
| T |
19462618 |
atttgtggttctttgtttcttattcggaaatggaggcatgcgtactttcggttagttgatagagtgggtgactttctctatgttactttgaccgtaaagt |
19462717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 7 - 410
Target Start/End: Original strand, 19415322 - 19415725
Alignment:
| Q |
7 |
aataataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaa |
106 |
Q |
| |
|
||||||||||| | |||||||||||||||||||||||| ||||| ||| |||| |||||| || ||||||| ||||| |||| |||||| || |||| |
|
|
| T |
19415322 |
aataataagttctacggtgaaattcctcagagcatgtctttcttaacctttttggattatttaaatttatcttacaacagttttgacggaaaaatcccaa |
19415421 |
T |
|
| Q |
107 |
tggggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaatcc |
206 |
Q |
| |
|
| || |||||||||||||||||||| ||||| || || | | | ||| ||| ||||||||||||||||||| || ||||||| ||||||||||||| |
|
|
| T |
19415422 |
taggaactcaacttcaaagttttaacgcatcaagttacaacgggaatcctaaactatgcggagctcctcttaataattgtaccatcaaagaagaaaatcc |
19415521 |
T |
|
| Q |
207 |
taaaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgaggg |
306 |
Q |
| |
|
|| |||||||| ||||| ||| ||||||||||| |||| ||| ||||| ||||||||||| || ||||| || ||||||||||| |||||||| ||| |
|
|
| T |
19415522 |
tacaactgcaacgccatcaacaaagaatgaagattatgattctatgaaagattcattgtatctaggaatgggagtgggatttgcagtaggtttctggggg |
19415621 |
T |
|
| Q |
307 |
attttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagt |
406 |
Q |
| |
|
|||| |||||| | ||||| |||| |||||| ||||||||||||| ||||||||||||||||||| | ||| ||||||||||||| | | ||||||| |
|
|
| T |
19415622 |
atttgtggttctatttttcttattagaaaatgcaggcatgcatacttccggtttattgatagagtggccggcaatctctatgttactttggtcgtaaagt |
19415721 |
T |
|
| Q |
407 |
taaa |
410 |
Q |
| |
|
|||| |
|
|
| T |
19415722 |
taaa |
19415725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 7 - 410
Target Start/End: Original strand, 18147968 - 18148359
Alignment:
| Q |
7 |
aataataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaa |
106 |
Q |
| |
|
||||| ||||||| |||||||||||||||| |||||||| ||||| ||| ||| |||||||||| ||||| | || |||||| |||||| || || | |
|
|
| T |
18147968 |
aataacaagttttttggtgaaattcctcagggcatgtctctcttaacctttttgagttatttgaatttatcatataataattttgacggaagaatcccga |
18148067 |
T |
|
| Q |
107 |
tggggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaatcc |
206 |
Q |
| |
|
| || || ||||||||||||||||||||||||||||| |||| || ||| ||| ||||||||||||| ||||| || |||||||| |||||||||||||| |
|
|
| T |
18148068 |
tcggaacacaacttcaaagttttaatgcatcgagctacattggcaatcctaaactatgcggagctccccttaataattgtaccacggaagaagaaaatcc |
18148167 |
T |
|
| Q |
207 |
taaaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgaggg |
306 |
Q |
| |
|
| || |||| ||||||||||||||||| ||| || |||||| |||||| | |||||||| || ||||||||||| |||||||| ||| |
|
|
| T |
18148168 |
tggaaatgca------------gagaatgaagatgatgaatctataagagagtcgttgtatttaggcatgggagtgggatttgcagtaggtttctggggg |
18148255 |
T |
|
| Q |
307 |
attttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagt |
406 |
Q |
| |
|
|||| |||||||||||||| |||| |||||||||||||| |||| |||||| ||||||||||||||||| | |||||||||||| ||| ||||||| |
|
|
| T |
18148256 |
atttgtggttctttgtttcttattaggaaatggaggcatgcgtactttcggttagttgatagagtgggtgactatctctatgttactgtgatcgtaaagt |
18148355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 7 - 410
Target Start/End: Original strand, 19438096 - 19438487
Alignment:
| Q |
7 |
aataataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaa |
106 |
Q |
| |
|
||||| ||||||| ||||||||||||||| |||||||| ||||| ||| |||| ||||||||| ||||| | || |||||| |||||| || || | |
|
|
| T |
19438096 |
aataacaagttttttggtgaaattcctcaaggcatgtctctcttaacctttttggattatttgaatttatcatataataattttgacggaagaatcccga |
19438195 |
T |
|
| Q |
107 |
tggggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaatcc |
206 |
Q |
| |
|
| || || ||||||||||||||||||||||||||||| |||| || ||| |||||||| |||| ||||||||| || |||||||| |||||||||||||| |
|
|
| T |
19438196 |
tcggaacgcaacttcaaagttttaatgcatcgagctacattggcaatcctaaattatgtggagttcctcttaataattgtaccacggaagaagaaaatcc |
19438295 |
T |
|
| Q |
207 |
taaaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgaggg |
306 |
Q |
| |
|
||||| || ||||||||||||||||||| ||| || |||||| |||||||| |||||||| |||||||||||||| ||||| || ||| |
|
|
| T |
19438296 |
taaaa------------atgcagagaatgaagatgatgaatctataagagagtcgttgtatctaggcatgggagttggatttgcagtaggtttttggggg |
19438383 |
T |
|
| Q |
307 |
attttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagt |
406 |
Q |
| |
|
|||| |||||| ||||||| |||| |||||||||||||| |||| |||||| |||||| |||| ||||| | || |||||||||| ||| ||||||| |
|
|
| T |
19438384 |
atttgtggttctatgtttcttattaggaaatggaggcatgcgtactttcggttagttgatacagtgtgtgactatctttatgttactttgatagtaaagt |
19438483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 7 - 410
Target Start/End: Original strand, 19352530 - 19352933
Alignment:
| Q |
7 |
aataataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaa |
106 |
Q |
| |
|
||||||||||||| |||||||||||| |||| |||| || | ||||||| || | ||| || ||||||||||| ||||| || |||| || |||| |
|
|
| T |
19352530 |
aataataagttttttggtgaaattccgcagaccatggctcgcctaaactttttagaggttttaaatttatcttgcaataatttcaatggaaaaatcccaa |
19352629 |
T |
|
| Q |
107 |
tggggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaatcc |
206 |
Q |
| |
|
|| || ||||||||||||||||||||||| || || |||| | ||| | | |||| |||||||||||||| || ||||||| ||||||||||||| |
|
|
| T |
19352630 |
ctggaacacaacttcaaagttttaatgcatcaagttacattgggaatcctagactatgtggagctcctcttaataattgtaccatgaaagaagaaaatcc |
19352729 |
T |
|
| Q |
207 |
taaaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgaggg |
306 |
Q |
| |
|
||| ||||||| ||||| ||||||||||||| ||||||||| |||||| ||||||||||| |||||||| ||||||||||||| |||||||| ||| |
|
|
| T |
19352730 |
taagactgcaacgccatcaacagagaatgaaggtgatgactccataaaagaatcattgtatctaggcatgggagttggatttgcagcaggtttctggggg |
19352829 |
T |
|
| Q |
307 |
attttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagt |
406 |
Q |
| |
|
|||| |||||||||||||| |||| |||||||||||||||||| | ||||||||| || |||||||| ||| ||| ||||| |||| || ||||||| |
|
|
| T |
19352830 |
atttgtggttctttgtttcttattagaaaatggaggcatgcatattttcggtttatatatggagtgggtaacaggctttatgtaactttaatggtaaagt |
19352929 |
T |
|
| Q |
407 |
taaa |
410 |
Q |
| |
|
|||| |
|
|
| T |
19352930 |
taaa |
19352933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 7 - 410
Target Start/End: Original strand, 19400867 - 19401267
Alignment:
| Q |
7 |
aataataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaa |
106 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| || ||||||||| || | |||||| ||||||||||| |||||| ||||||| || |||| |
|
|
| T |
19400867 |
aataataagttttttggtgaaattcctcagagcatggctctcttaaactttttagaggttttgaatttatcttgcaataattttgacggaacaatcccaa |
19400966 |
T |
|
| Q |
107 |
tggggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgta---------ccacagaaga |
197 |
Q |
| |
|
| || ||||| |||||| |||| || |||| |||| |||| | |||||| ||||||||||||||||||||||| |||| ||| ||||| |
|
|
| T |
19400967 |
taggatctcaaattcaaacttttgatccatcaagcttcattggaaatccaaagttatgcggagctcctcttaaaaattgtaaaaattgtaccaaggaaga |
19401066 |
T |
|
| Q |
198 |
agaaaatcctaaaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggt |
297 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||| || ||| |||||| || ||||| ||||||||||| || ||||||||||| ||| |
|
|
| T |
19401067 |
agaaaatcctaaaaatgca------------gagaatgaagatgacgaatctataaaagaatcgttgtaccttggcatgggagtgggatttgcagtaggt |
19401154 |
T |
|
| Q |
298 |
ttctgagggattttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcga |
397 |
Q |
| |
|
||||| ||||||| ||||||||||||||||||| |||||||||||||||||| | |||||| || || |||||||| ||| ||||||||| |||| || |
|
|
| T |
19401155 |
ttctgggggatttgtggttctttgtttctcattagaaaatggaggcatgcatattttcggttcatatatggagtgggtaacaggctctatgtaactttga |
19401254 |
T |
|
| Q |
398 |
ttgtaaagttaaa |
410 |
Q |
| |
|
| ||||||||||| |
|
|
| T |
19401255 |
tggtaaagttaaa |
19401267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 7 - 410
Target Start/End: Original strand, 17950973 - 17951364
Alignment:
| Q |
7 |
aataataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaa |
106 |
Q |
| |
|
||||| ||||||| ||||||||||||||| | |||||| ||| | ||| ||| |||||||||| ||||| | || |||||| | |||| || || |
|
|
| T |
17950973 |
aataacaagttttttggtgaaattcctcatggtatgtctctcttgacctttttgagttatttgaatttatcatataataattttgatggaaaaatcccgg |
17951072 |
T |
|
| Q |
107 |
tggggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaatcc |
206 |
Q |
| |
|
| || || ||||||||||||||||||||||||||||| |||| || || |||||||| ||| |||||||||| || ||| |||| |||||||||||||| |
|
|
| T |
17951073 |
tcggtacacaacttcaaagttttaatgcatcgagctacattggcaatcttaaattatgtggatctcctcttaataattgttccacggaagaagaaaatcc |
17951172 |
T |
|
| Q |
207 |
taaaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgaggg |
306 |
Q |
| |
|
||||| |||| |||||||| |||||||| ||| |||||| |||||||| ||||| ||||| || ||||||||||| |||||||| ||| |
|
|
| T |
17951173 |
taaaaatgca------------gagaatgaggatgatgaatctctaaaagaatcattgtaccttggtatgggagtgggatttgcagtaggtttctggggg |
17951260 |
T |
|
| Q |
307 |
attttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagt |
406 |
Q |
| |
|
|||| |||||||||||||| ||| |||||||||||||||||||| ||||||||| || |||||||| ||| ||||||||| |||| || ||||||| |
|
|
| T |
17951261 |
atttgtggttctttgtttcttattcgaaaatggaggcatgcatactttcggtttatatatggagtgggtaacaggctctatgtaactttgaaggtaaagt |
17951360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 7 - 407
Target Start/End: Original strand, 18109580 - 18109968
Alignment:
| Q |
7 |
aataataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaa |
106 |
Q |
| |
|
||||| ||||||| |||||||||||| ||| | |||||| ||| | ||| |||||||||||||| ||||| | || |||||| | |||| || ||| |
|
|
| T |
18109580 |
aataacaagttttttggtgaaattccccagggtatgtctctcttgacctttttgggttatttgaatttatcatataataattttgatggaaaaatcccag |
18109679 |
T |
|
| Q |
107 |
tggggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaatcc |
206 |
Q |
| |
|
| || || ||||||||||||||||||||||||||||| |||| || |||||||||||| ||| |||||||||| || |||||||| |||||||||||| | |
|
|
| T |
18109680 |
tcggtacacaacttcaaagttttaatgcatcgagctacattggcaatccaaaattatgtggatctcctcttaataattgtaccacggaagaagaaaattc |
18109779 |
T |
|
| Q |
207 |
taaaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgaggg |
306 |
Q |
| |
|
||||| ||| |||||||| |||||||| ||| |||||| |||||||| ||||| ||||| || ||||||||||| |||||||| ||| |
|
|
| T |
18109780 |
taaaa------------ttactgagaatgaggatgatgaatctataaaagaatcattgtaccttggtatgggagtgggatttgcagtaggtttctggggg |
18109867 |
T |
|
| Q |
307 |
attttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagt |
406 |
Q |
| |
|
|||| |||||||||||| | || | ||||||||||||||||||| ||| ||||| || |||||||| ||| ||||||||| || | ||| ||||||| |
|
|
| T |
18109868 |
atttgtggttctttgtttgttatcaggaaatggaggcatgcatactttcgttttatatatggagtgggtaacaggctctatgtaacattgatggtaaagt |
18109967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 58 - 410
Target Start/End: Original strand, 18104697 - 18105037
Alignment:
| Q |
58 |
ttgggttatttgaacttatcttgcaacaattttaacggaactataccaatggggactcaacttcaaagttttaatgcatcgagctatattgccagtccaa |
157 |
Q |
| |
|
|||||||||||||| ||||| | || |||||| |||||| || || | || || ||||||||||||||||||||||| ||||| |||| || ||| | |
|
|
| T |
18104697 |
ttgggttatttgaatttatcatataataattttgacggaagaatcccgaccggaacacaacttcaaagttttaatgcatcaagctacattggcaatccta |
18104796 |
T |
|
| Q |
158 |
aattatgcggagctcctcttaaaaactgtaccacagaagaagaaaatcctaaaactgcaaagccatatacagagaatgaagatgatgactctgcaaaaga |
257 |
Q |
| |
|
|| ||||||||||||||||||| |||||||||| |||||||||||||| || |||| ||||||||| ||||||| ||| || ||| |
|
|
| T |
18104797 |
aactatgcggagctcctcttaataactgtaccaggaaagaagaaaatcctggaaatgca------------gagaatgaaaatgatgaatctataagaga |
18104884 |
T |
|
| Q |
258 |
gtcattgtatcttggcatgggggttggatttgcagttggtttctgagggattttcggttctttgtttctcattacaaaatggaggcatgcatactatcgg |
357 |
Q |
| |
|
||| |||||| | |||||||| || ||||||||||| || |||| ||||||||||||||| ||||||| |||| ||||||||||||||||||| |||| |
|
|
| T |
18104885 |
gtcgttgtatttaggcatgggagtgggatttgcagtaggattcttggggattttcggttctatgtttcttattaggaaatggaggcatgcatactttcgg |
18104984 |
T |
|
| Q |
358 |
tttattgatagagtgggtgacaagctctatgttacttcgattgtaaagttaaa |
410 |
Q |
| |
|
|| || |||||||||||||| | ||||||||||||| ||| ||||||||||| |
|
|
| T |
18104985 |
ttagttaatagagtgggtgactatctctatgttactttgatcgtaaagttaaa |
18105037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 317 - 408
Target Start/End: Complemental strand, 24493332 - 24493241
Alignment:
| Q |
317 |
ctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagtta |
408 |
Q |
| |
|
|||| ||||| |||| ||||||||||| || ||||| |||||||| ||| |||||||||||| | ||||||| |||| ||| || |||||| |
|
|
| T |
24493332 |
ctttatttcttattaggaaatggaggcacgcgtactaccggtttatcgatggagtgggtgacaggatctatgtaactttgatggtgaagtta |
24493241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 7 - 409
Target Start/End: Original strand, 8460704 - 8461106
Alignment:
| Q |
7 |
aataataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaa |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| || ||||||||| || | |||||| ||||||||||| |||||| |||||| || |||| |
|
|
| T |
8460704 |
aataataagttttgtggtgaaattcctcagagcatggctctcttaaactttttagaggttttgaatttatcttgcaataattttgacggaaaaatcccaa |
8460803 |
T |
|
| Q |
107 |
tggggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaatcc |
206 |
Q |
| |
|
| || |||||||||||||||||||||||||||||||| |||| | ||| ||| | |||||||||||||||| | |||||||| ||||||||||||| |
|
|
| T |
8460804 |
ttggaactcaacttcaaagttttaatgcatcgagctacattggaaatcctaaactgtgcggagctcctcttagtagttgtaccacgaaagaagaaaatcc |
8460903 |
T |
|
| Q |
207 |
taaaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgaggg |
306 |
Q |
| |
|
||||||||||| ||| | ||||||||||||||||||||||||| || ||| |||||||||||||||||||| |||||||||||||| ||||| || ||| |
|
|
| T |
8460904 |
taaaactgcaatgccgtctacagagaatgaagatgatgactctataagagaatcattgtatcttggcatgggagttggatttgcagtgggtttttggggg |
8461003 |
T |
|
| Q |
307 |
attttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagt |
406 |
Q |
| |
|
|||| |||||||||||||| |||| ||||||||||||||||||||||| ||||||||| || |||||||||||||||||| | || ||| ||||||| |
|
|
| T |
8461004 |
atttgtggttctttgtttcttattaggaaatggaggcatgcatactatcgatttattgatggaatgggtgacaagctctatggaattttgatggtaaagt |
8461103 |
T |
|
| Q |
407 |
taa |
409 |
Q |
| |
|
||| |
|
|
| T |
8461104 |
taa |
8461106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 170; Significance: 9e-91; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 170; E-Value: 9e-91
Query Start/End: Original strand, 7 - 412
Target Start/End: Original strand, 15536671 - 15537076
Alignment:
| Q |
7 |
aataataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaa |
106 |
Q |
| |
|
||||||||||||| ||||||||||||||| | ||||| || ||||| ||| |||||||||||||| ||||||||||| ||||| || |||| || |||| |
|
|
| T |
15536671 |
aataataagttttatggtgaaattcctcaaaacatgtttgtcttaacctttttgggttatttgaatttatcttgcaataatttcaatggaaaaatcccaa |
15536770 |
T |
|
| Q |
107 |
tggggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaatcc |
206 |
Q |
| |
|
| || || |||||||||||||||||||||||||| || |||| | ||| ||| | || ||||||||||| || || ||||||| ||||||||||||| |
|
|
| T |
15536771 |
ttggaacacaacttcaaagttttaatgcatcgagttacattgagaatcctaaactgtgtggagctcctctcaataattgtaccaagaaagaagaaaatcc |
15536870 |
T |
|
| Q |
207 |
taaaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgaggg |
306 |
Q |
| |
|
||||| |||| |||| |||||||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||||||| || |||||||| ||| |
|
|
| T |
15536871 |
caaaaccgcaacaccatccacagagaatgaagatgatgactctaacaaagaatcattgtatctagggatgggagttggatttgcggtaggtttctggggg |
15536970 |
T |
|
| Q |
307 |
attttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaagt |
406 |
Q |
| |
|
|||| |||||||||||||| |||| |||||||||||||||||||| |||||||| ||||| ||| ||||||||| |||||||||||| ||| ||||||| |
|
|
| T |
15536971 |
atttgtggttctttgtttcttattagaaaatggaggcatgcatactttcggtttactgataaagtaggtgacaagatctatgttactttgatcgtaaagt |
15537070 |
T |
|
| Q |
407 |
taaaca |
412 |
Q |
| |
|
|||||| |
|
|
| T |
15537071 |
taaaca |
15537076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 73 - 417
Target Start/End: Complemental strand, 2709369 - 2709025
Alignment:
| Q |
73 |
ttatcttgcaacaattttaacggaactataccaatggggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctc |
172 |
Q |
| |
|
||||||||||| |||||||| |||| || ||||| |||||||||||||| ||||||||||| |||||||| |||| | ||| ||||||||||||||| |
|
|
| T |
2709369 |
ttatcttgcaataattttaatggaaaaatcccaatagggactcaacttcagagttttaatgcttcgagctacattgggaacccacaattatgcggagctc |
2709270 |
T |
|
| Q |
173 |
ctcttaaaaactgtaccacagaagaagaaaatcctaaaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttgg |
272 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| ||||| |||| ||||| || || || ||||| || || ||| || ||| ||||||||||| || |
|
|
| T |
2709269 |
ctcttaaaaactgtactgcagaagaagaaaatcataaaaaggcaatgccatctagaggaaaagaagacgacgaatctataagagaatcattgtatctagg |
2709170 |
T |
|
| Q |
273 |
catgggggttggatttgcagttggtttctgagggattttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtg |
372 |
Q |
| |
|
|||||| |||||||||||||| ||||| || ||||||| ||| |||||||||| |||| ||||||||| | |||||||||||||||||||| |||| |
|
|
| T |
2709169 |
catgggagttggatttgcagtaggtttttgggggatttgtggtcctttgtttcttattaggaaatggaggaacacatactatcggtttattgatggagta |
2709070 |
T |
|
| Q |
373 |
ggtgacaagctctatgttacttcgattgtaaagttaaacaacttt |
417 |
Q |
| |
|
||||||||||||||||| |||| ||| ||||||||||||||||| |
|
|
| T |
2709069 |
ggtgacaagctctatgtaactttgatgataaagttaaacaacttt |
2709025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 159; Significance: 3e-84; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 7 - 410
Target Start/End: Complemental strand, 13665812 - 13665407
Alignment:
| Q |
7 |
aataataagttttgtggtgaaattcctcagagcatgtctgacttaaacttcttgggttat--ttgaacttatcttgcaacaattttaacggaactatacc |
104 |
Q |
| |
|
||||||||||||| |||||||||||||| |||||||||| ||||| ||| |||| ||| ||||| |||||| |||||||||| |||||| || || |
|
|
| T |
13665812 |
aataataagttttttggtgaaattcctcggagcatgtctatcttaacctttttggaatatatttgaatttatctcacaacaattttgacggaaaaatccc |
13665713 |
T |
|
| Q |
105 |
aatggggactcaacttcaaagttttaatgcatcgagctatattgccagtccaaaattatgcggagctcctcttaaaaactgtaccacagaagaagaaaat |
204 |
Q |
| |
|
|| || |||||||||||||||||||||||||| || ||||||| | ||| ||| | || |||||||||||||| || ||||||| ||||||||||| |
|
|
| T |
13665712 |
tataggaactcaacttcaaagttttaatgcatcaagttatattgggaatcctaaactttgtggagctcctcttaataattgtaccatgaaagaagaaaat |
13665613 |
T |
|
| Q |
205 |
cctaaaactgcaaagccatatacagagaatgaagatgatgactctgcaaaagagtcattgtatcttggcatgggggttggatttgcagttggtttctgag |
304 |
Q |
| |
|
|||| |||||||| |||| |||| ||||||||||||| |||||| |||||| |||||| | ||||||||||||||||||||||||| |||||||| | |
|
|
| T |
13665612 |
cctagaactgcaacaccatctacaaagaatgaagatgacgactctataaaagaatcattgaaccttggcatgggggttggatttgcagcaggtttctggg |
13665513 |
T |
|
| Q |
305 |
ggattttcggttctttgtttctcattacaaaatggaggcatgcatactatcggtttattgatagagtgggtgacaagctctatgttacttcgattgtaaa |
404 |
Q |
| |
|
|||| | |||||||||||||| |||| ||||||||||||||||| || ||||||| ||||||||||||| ||||| |||||| |||||| ||| ||||| |
|
|
| T |
13665512 |
ggatatgtggttctttgtttcttattagaaaatggaggcatgcatgctttcggttttttgatagagtgggcgacaatctctatattactttgatggtaaa |
13665413 |
T |
|
| Q |
405 |
gttaaa |
410 |
Q |
| |
|
|||||| |
|
|
| T |
13665412 |
gttaaa |
13665407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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