View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17550_high_12 (Length: 356)
Name: NF17550_high_12
Description: NF17550
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17550_high_12 |
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Alignment Details
Target: chr5 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 223 - 339
Target Start/End: Complemental strand, 32184710 - 32184594
Alignment:
| Q |
223 |
ttctattatatcactctatttttctcttcattttaaaatgtataacttttttcctaatctctgacttcatacagtacctcatatttttaatctatatttc |
322 |
Q |
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| T |
32184710 |
ttctattatatcactctatttttctcttcattttaaaatgtataacttttttcctaatctctgacttcatttagtacctcatatttttaatctctatttc |
32184611 |
T |
|
| Q |
323 |
aatcataatattaataa |
339 |
Q |
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||||||||||||||||| |
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| T |
32184610 |
aatcataatattaataa |
32184594 |
T |
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