View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17550_low_5 (Length: 500)

Name: NF17550_low_5
Description: NF17550
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17550_low_5
NF17550_low_5
[»] chr3 (49 HSPs)
chr3 (65-483)||(4169039-4169445)
chr3 (132-297)||(42637956-42638121)
chr3 (125-343)||(3785860-3786078)
chr3 (125-343)||(3823549-3823768)
chr3 (146-343)||(9710738-9710929)
chr3 (132-348)||(19280093-19280306)
chr3 (125-321)||(1705663-1705857)
chr3 (175-340)||(11509804-11509969)
chr3 (133-305)||(44080192-44080364)
chr3 (132-315)||(26308640-26308823)
chr3 (143-284)||(5341833-5341974)
chr3 (125-256)||(22432315-22432446)
chr3 (132-254)||(31545603-31545725)
chr3 (132-291)||(19624256-19624414)
chr3 (126-344)||(27707571-27707788)
chr3 (125-241)||(42481300-42481416)
chr3 (170-305)||(23163264-23163400)
chr3 (151-228)||(27335402-27335479)
chr3 (141-229)||(13358101-13358189)
chr3 (225-322)||(31545714-31545811)
chr3 (150-290)||(27079314-27079453)
chr3 (150-290)||(27085111-27085250)
chr3 (125-290)||(34627292-34627453)
chr3 (228-323)||(26308553-26308648)
chr3 (151-228)||(27365008-27365085)
chr3 (225-321)||(3823750-3823845)
chr3 (225-321)||(22432428-22432524)
chr3 (224-323)||(18733572-18733670)
chr3 (224-323)||(27335307-27335406)
chr3 (180-287)||(41571797-41571904)
chr3 (140-202)||(11501309-11501371)
chr3 (228-321)||(19280298-19280391)
chr3 (151-228)||(27326047-27326124)
chr3 (151-228)||(27332284-27332361)
chr3 (247-314)||(5341996-5342063)
chr3 (141-216)||(39126189-39126263)
chr3 (225-321)||(3786060-3786153)
chr3 (228-305)||(27040683-27040760)
chr3 (225-274)||(34164326-34164375)
chr3 (238-305)||(11501244-11501310)
chr3 (160-210)||(23163787-23163837)
chr3 (225-291)||(39126263-39126329)
chr3 (224-297)||(33488333-33488406)
chr3 (247-303)||(13358996-13359052)
chr3 (148-186)||(11509989-11510027)
chr3 (277-343)||(31545424-31545490)
chr3 (264-313)||(1705593-1705642)
chr3 (22-97)||(3823797-3823869)
chr3 (225-289)||(18733430-18733495)
[»] chr2 (13 HSPs)
chr2 (127-343)||(43900426-43900642)
chr2 (132-344)||(30906051-30906263)
chr2 (140-321)||(45305887-45306067)
chr2 (24-260)||(1400667-1400901)
chr2 (125-255)||(28527316-28527445)
chr2 (52-228)||(33667328-33667506)
chr2 (225-321)||(1400689-1400785)
chr2 (125-308)||(7378463-7378643)
chr2 (225-315)||(28527244-28527334)
chr2 (225-321)||(33667413-33667509)
chr2 (247-321)||(41212426-41212500)
chr2 (227-321)||(30905966-30906060)
chr2 (151-205)||(34175155-34175209)
[»] chr4 (30 HSPs)
chr4 (153-321)||(9808994-9809162)
chr4 (128-321)||(17633337-17633530)
chr4 (141-321)||(9810680-9810860)
chr4 (125-341)||(16583496-16583712)
chr4 (150-321)||(55666844-55667013)
chr4 (132-341)||(19596680-19596891)
chr4 (150-344)||(8740809-8741003)
chr4 (125-260)||(1966826-1966961)
chr4 (132-301)||(33179759-33179928)
chr4 (150-291)||(35544438-35544578)
chr4 (141-303)||(2433654-2433811)
chr4 (132-245)||(33249616-33249729)
chr4 (134-290)||(42908520-42908675)
chr4 (224-315)||(24669270-24669361)
chr4 (125-305)||(14351000-14351178)
chr4 (151-290)||(24669123-24669274)
chr4 (228-313)||(1966758-1966841)
chr4 (194-260)||(20874814-20874880)
chr4 (225-323)||(42908666-42908763)
chr4 (225-305)||(14351160-14351240)
chr4 (247-323)||(17633255-17633331)
chr4 (249-343)||(19746939-19747033)
chr4 (249-343)||(19792773-19792867)
chr4 (231-305)||(9810866-9810941)
chr4 (255-342)||(25007625-25007711)
chr4 (212-250)||(1966978-1967016)
chr4 (227-321)||(19596882-19596977)
chr4 (228-310)||(8740715-8740796)
chr4 (247-305)||(9809196-9809254)
chr4 (252-320)||(33249554-33249622)
[»] chr6 (45 HSPs)
chr6 (125-321)||(22608281-22608476)
chr6 (141-321)||(33815025-33815198)
chr6 (127-302)||(10304695-10304870)
chr6 (142-341)||(3222332-3222530)
chr6 (132-340)||(23595055-23595253)
chr6 (125-237)||(138708-138820)
chr6 (125-237)||(146729-146841)
chr6 (133-343)||(3620761-3620970)
chr6 (152-313)||(9474562-9474718)
chr6 (225-321)||(9068503-9068599)
chr6 (125-236)||(9068411-9068521)
chr6 (225-342)||(7706758-7706876)
chr6 (125-189)||(2430600-2430664)
chr6 (134-229)||(2834974-2835069)
chr6 (230-321)||(7915696-7915787)
chr6 (247-326)||(23595261-23595340)
chr6 (225-323)||(30056039-30056138)
chr6 (229-310)||(10304627-10304707)
chr6 (225-301)||(138650-138726)
chr6 (225-301)||(146671-146747)
chr6 (203-291)||(11108147-11108235)
chr6 (225-281)||(2430650-2430706)
chr6 (247-304)||(11108102-11108159)
chr6 (252-321)||(18980401-18980470)
chr6 (228-321)||(24386312-24386405)
chr6 (225-305)||(2835060-2835140)
chr6 (231-286)||(2365649-2365704)
chr6 (238-321)||(9068314-9068395)
chr6 (225-291)||(2430553-2430618)
chr6 (230-291)||(7706935-7706996)
chr6 (264-343)||(7915595-7915675)
chr6 (22-94)||(2430498-2430568)
chr6 (28-97)||(11108067-11108133)
chr6 (225-276)||(14524091-14524142)
chr6 (228-322)||(22608461-22608558)
chr6 (21-97)||(2835108-2835181)
chr6 (227-305)||(3222532-3222610)
chr6 (252-306)||(20084729-20084783)
chr6 (225-274)||(15341435-15341484)
chr6 (225-274)||(15341858-15341907)
chr6 (228-321)||(20084596-20084689)
chr6 (132-189)||(20084678-20084735)
chr6 (252-321)||(24386203-24386272)
chr6 (125-189)||(7706862-7706926)
chr6 (149-189)||(24386283-24386323)
[»] chr8 (29 HSPs)
chr8 (132-343)||(38606828-38607039)
chr8 (125-315)||(5321955-5322145)
chr8 (125-343)||(1251470-1251687)
chr8 (125-321)||(31273555-31273751)
chr8 (142-315)||(5573706-5573879)
chr8 (153-321)||(29367076-29367243)
chr8 (125-284)||(15714688-15714847)
chr8 (142-305)||(26493347-26493507)
chr8 (141-343)||(31596693-31596894)
chr8 (132-273)||(1240901-1241041)
chr8 (195-343)||(33286115-33286263)
chr8 (225-332)||(15714599-15714706)
chr8 (151-344)||(15233115-15233318)
chr8 (225-323)||(5573877-5573976)
chr8 (227-310)||(38606754-38606837)
chr8 (166-345)||(32959456-32959635)
chr8 (252-342)||(24576180-24576270)
chr8 (132-257)||(24575907-24576023)
chr8 (141-232)||(6809804-6809895)
chr8 (247-323)||(28700058-28700133)
chr8 (225-291)||(5321907-5321973)
chr8 (224-305)||(15233314-15233395)
chr8 (225-274)||(40502175-40502224)
chr8 (225-276)||(24919659-24919710)
chr8 (225-279)||(24919871-24919925)
chr8 (231-321)||(26493252-26493342)
chr8 (132-229)||(24537982-24538078)
chr8 (225-274)||(40502387-40502436)
chr8 (225-297)||(26914631-26914702)
[»] chr7 (31 HSPs)
chr7 (125-344)||(31303350-31303569)
chr7 (141-297)||(20556710-20556866)
chr7 (125-343)||(18312725-18312942)
chr7 (125-345)||(21548349-21548568)
chr7 (125-323)||(4290745-4290942)
chr7 (125-274)||(21589590-21589739)
chr7 (132-303)||(15958313-15958485)
chr7 (132-323)||(5083792-5083982)
chr7 (127-290)||(22740654-22740817)
chr7 (132-237)||(28804990-28805094)
chr7 (224-323)||(32964848-32964947)
chr7 (151-343)||(32964651-32964852)
chr7 (247-321)||(28804902-28804976)
chr7 (225-343)||(28805116-28805234)
chr7 (225-321)||(21589721-21589817)
chr7 (151-228)||(46943761-46943839)
chr7 (227-336)||(31303553-31303661)
chr7 (225-305)||(22033158-22033238)
chr7 (225-304)||(21548550-21548629)
chr7 (225-291)||(5083738-5083803)
chr7 (132-197)||(5174910-5174975)
chr7 (225-305)||(18312924-18313004)
chr7 (225-321)||(20556867-20556963)
chr7 (141-228)||(27523496-27523583)
chr7 (193-235)||(2887188-2887230)
chr7 (225-291)||(15958258-15958324)
chr7 (247-305)||(22032996-22033054)
chr7 (228-305)||(4290927-4291004)
chr7 (247-321)||(22740076-22740150)
chr7 (26-97)||(28804882-28804950)
chr7 (172-228)||(22033095-22033151)
[»] chr5 (29 HSPs)
chr5 (125-342)||(13312498-13312714)
chr5 (125-255)||(35922718-35922848)
chr5 (125-321)||(22169377-22169573)
chr5 (148-280)||(38521984-38522115)
chr5 (140-290)||(43461709-43461858)
chr5 (128-301)||(33958976-33959148)
chr5 (140-315)||(19621481-19621655)
chr5 (147-343)||(31189474-31189671)
chr5 (125-260)||(42034739-42034872)
chr5 (193-343)||(36169394-36169543)
chr5 (154-321)||(43262708-43262889)
chr5 (225-323)||(15221662-15221760)
chr5 (225-307)||(13312696-13312778)
chr5 (151-228)||(30704398-30704476)
chr5 (151-323)||(7155998-7156182)
chr5 (149-204)||(30045885-30045940)
chr5 (224-317)||(30704309-30704402)
chr5 (225-321)||(22169555-22169650)
chr5 (228-323)||(42034857-42034952)
chr5 (247-321)||(35922628-35922702)
chr5 (125-193)||(2477302-2477370)
chr5 (225-305)||(33958911-33958991)
chr5 (225-321)||(35922830-35922926)
chr5 (264-315)||(31189710-31189761)
chr5 (231-305)||(36169337-36169410)
chr5 (132-187)||(15221618-15221673)
chr5 (55-97)||(19621613-19621655)
chr5 (252-305)||(15221572-15221625)
chr5 (224-272)||(7156178-7156226)
[»] scaffold1126 (2 HSPs)
scaffold1126 (125-305)||(202-382)
scaffold1126 (228-323)||(121-217)
[»] chr1 (34 HSPs)
chr1 (125-321)||(29677078-29677263)
chr1 (140-346)||(34364128-34364332)
chr1 (125-290)||(34490140-34490304)
chr1 (142-282)||(25238436-25238575)
chr1 (125-344)||(5831430-5831648)
chr1 (125-254)||(29167803-29167931)
chr1 (125-305)||(38951840-38952023)
chr1 (140-260)||(42604199-42604319)
chr1 (141-305)||(517421-517585)
chr1 (224-320)||(5855201-5855297)
chr1 (228-321)||(34490289-34490382)
chr1 (188-306)||(9929834-9929951)
chr1 (152-228)||(2996025-2996101)
chr1 (151-286)||(9468064-9468199)
chr1 (225-321)||(13350903-13350999)
chr1 (228-315)||(5831633-5831720)
chr1 (250-323)||(13351008-13351081)
chr1 (227-289)||(38244801-38244863)
chr1 (125-189)||(2569960-2570024)
chr1 (225-305)||(38952005-38952085)
chr1 (228-291)||(29167756-29167818)
chr1 (151-291)||(5855056-5855205)
chr1 (225-323)||(29676999-29677096)
chr1 (247-304)||(25238596-25238653)
chr1 (225-321)||(2570006-2570101)
chr1 (225-321)||(2569876-2569974)
chr1 (225-274)||(24708074-24708123)
chr1 (263-324)||(28499662-28499723)
chr1 (225-282)||(38245012-38245069)
chr1 (226-274)||(17227500-17227548)
chr1 (140-179)||(9929739-9929778)
chr1 (22-97)||(5855250-5855322)
chr1 (232-305)||(9929662-9929735)
chr1 (239-315)||(2995928-2996003)
[»] scaffold0251 (1 HSPs)
scaffold0251 (140-321)||(10623-10804)
[»] scaffold0123 (1 HSPs)
scaffold0123 (132-305)||(24021-24195)
[»] scaffold0126 (2 HSPs)
scaffold0126 (201-343)||(21549-21689)
scaffold0126 (225-322)||(21432-21529)
[»] scaffold0043 (2 HSPs)
scaffold0043 (151-228)||(87035-87112)
scaffold0043 (225-321)||(86895-86991)
[»] scaffold0024 (1 HSPs)
scaffold0024 (151-228)||(112158-112235)
[»] scaffold0291 (1 HSPs)
scaffold0291 (151-228)||(5870-5947)
[»] scaffold0213 (2 HSPs)
scaffold0213 (231-291)||(24738-24798)
scaffold0213 (226-289)||(24932-24995)


Alignment Details
Target: chr3 (Bit Score: 282; Significance: 1e-158; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 65 - 483
Target Start/End: Original strand, 4169039 - 4169445
Alignment:
Q  65 tttgtactattctgaaaaatttcagttaaccaatatggtatgcatgacctcannnnnnncagttgcatgaccaccattttttcagaatttatttggttaa 164  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||       |||||||||||| || |||||||||||||||||||||||||    
T  4169039 tttgtactactctgaaaaatttcagttaaccaatatggtatgcgtgacctcatttttt-cagttgcatgactactattttttcagaatttatttggttaa 4169137  T
Q  165 ctaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgataaaatgtggtcacaaaga 264  Q
    ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||         |||| ||||| |||    
T  4169138 ctaaatggaaaaatagtggtcacgcacattttagttgcgttaccacatttttcagcttctaaatagtggtcacgcaa---------tgtgatcacataga 4169228  T
Q  265 ccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatcaatctttattcaaatacaaatgcggtggttct 364  Q
    |||||||||||||||||||||||||| ||||  |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4169229 ccatatatttagttaactgaaattttcgagataggtacaaaagggt--acatattaaagttgactatcaatctttattcaaatacaaatgcagtggttct 4169326  T
Q  365 gagtcgatacttactttaatatggtggtaacgtgcagaaattggattggaaaaggtgtaatacttgcaatagagatggtgtaaacccagtgaaatcgttt 464  Q
    ||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4169327 gaggcgatacctactttaatatggtggtaacgtgcaggaattggattggaaaaggtgtaatacttgcaatagagatggtgtaaacccagtgaaatcgttt 4169426  T
Q  465 gggatactatgatagtttc 483  Q
    ||||||| |||||||||||    
T  4169427 gggataccatgatagtttc 4169445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 132 - 297
Target Start/End: Original strand, 42637956 - 42638121
Alignment:
Q  132 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 231  Q
    ||||||| ||||||||||||||||||||||||||||| |  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42637956 tgaccactattttttcagaatttatttggttaactaagttgaaaaatagtggttacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 42638055  T
Q  232 ggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagt 297  Q
    |||||||||||||| |||||||||||| | | ||||||||||||||||||||||||||| ||||||    
T  42638056 ggtcacgcaactgaaaaaatgtggtcatatataccatatatttagttaactgaaattttcgagagt 42638121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 125 - 343
Target Start/End: Complemental strand, 3786078 - 3785860
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacattttt-cagcttc 223  Q
    |||||| ||||||| |||||| || ||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||| |||||| ||||||     
T  3786078 agttgcgtgaccactatttttccataatttatttggttaactaagtggaaaaa-agtggtcacgcgcattttagttgcgtgaccatattttttcagctta 3785980  T
Q  224 taaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 323  Q
    ||||||||||||||| ||| || |||||||||||||| |||||||| | || ||||||||||||||| |||||||||||||| ||||||||| ||||| |    
T  3785979 taaatagtggtcacgtaacagaaaaaatgtggtcacacagaccataaaattggttaactgaaattttcgagagtggtacaaaggggtgtacacattaagg 3785880  T
Q  324 ttgactatcaatctttattc 343  Q
     || ||| ||||||||||||    
T  3785879 gtgtctaccaatctttattc 3785860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 125 - 343
Target Start/End: Complemental strand, 3823768 - 3823549
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacattttt--cagctt 222  Q
    |||||| ||||||| |||||| || ||||||||||||||||||| || ||||| ||||||||| ||||||||||||||||||||| ||||||  ||||||    
T  3823768 agttgcgtgaccactatttttccataatttatttggttaactaagtggaaaaa-agtggtcacacgcattttagttgcgtgaccatatttttttcagctt 3823670  T
Q  223 ctaaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaa 322  Q
     ||||||||||||||||||| || |||||||||||||| |||||||||| || ||||||||||||||| |||||||||||||| ||||||||| |||||     
T  3823669 ataaatagtggtcacgcaacagaaaaaatgtggtcacacagaccatataattggttaactgaaattttcgagagtggtacaaaggggtgtacacattaag 3823570  T
Q  323 gttgactatcaatctttattc 343  Q
    | || |||  |||||||||||    
T  3823569 ggtgtctactaatctttattc 3823549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 146 - 343
Target Start/End: Original strand, 9710738 - 9710929
Alignment:
Q  146 tcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactga 245  Q
    ||||||||||||||||||||||| || |||||||||||||| | | |||| ||||||||||||||| |||||||||||||| ||||||||||||||| ||    
T  9710738 tcagaatttatttggttaactaagtggaaaaatagtggtcaagtgtattt-agttgcgtgaccacagttttcagcttctaagtagtggtcacgcaaccga 9710836  T
Q  246 taaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatcaatctttattc 343  Q
     ||||| ||||||     ||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||| | |  ||| ||||||||||||    
T  9710837 aaaaatatggtca-----accatatatttggttaactgaaatttttcagagtggtacaaaggggtgtacatattaagggtttctaccaatctttattc 9710929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 132 - 348
Target Start/End: Complemental strand, 19280306 - 19280093
Alignment:
Q  132 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 231  Q
    ||||||| | ||||||| ||||||||||||||||||| || |||| ||||||||||||| ||||||||||||||||||||||||||| |||||||| |||    
T  19280306 tgaccactaatttttcaaaatttatttggttaactaagtggaaaa-tagtggtcacgcgaattttagttgcgtgaccacatttttcaacttctaaacagt 19280208  T
Q  232 ggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactat 331  Q
    ||||||||| |||| |||||||||||||  ||||||||||||| ||||||| |||| |||   ||||||||||| |||||||||  |||| | || |||     
T  19280207 ggtcacgcatctgaaaaaatgtggtcactcagaccatatatttggttaactaaaatattt--tagtggtacaaaggggtgtacactttaagggtgtctac 19280110  T
Q  332 caatctttattcaaata 348  Q
    | |||||||||| ||||    
T  19280109 cgatctttattccaata 19280093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 125 - 321
Target Start/End: Original strand, 1705663 - 1705857
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 224  Q
    ||||| |||||||| | |||| ||||| ||||||||||||||||  | |||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  1705663 agttgtatgaccactagttttccagaaattatttggttaactaaggggaaaaatagtggtcacgcgcattttagttgcatgaccatatttttcagcttct 1705762  T
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    |||||||||||||||||||   ||||| || ||||| | | ||| ||||| |||||||||||||||| | | || |||| |||| |||||| |||||    
T  1705763 aaatagtggtcacgcaact--aaaaatatgatcacacatatcatgtatttggttaactgaaattttttacaatgatacacaaggatgtacacattaa 1705857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 175 - 340
Target Start/End: Complemental strand, 11509969 - 11509804
Alignment:
Q  175 aaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatattt 274  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||| |||||||||||||| | | |  ||||||    
T  11509969 aaataggggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaataaaggtcacgcaagtgaaaaaatgtggtcacacaaatcgcatattt 11509870  T
Q  275 agttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatcaatcttta 340  Q
     ||||  |||||||||| ||||||||||||| ||||||||| |||||   || |||||||||||||    
T  11509869 ggttatttgaaatttttaagagtggtacaaaggggtgtacacattaagtgtgtctatcaatcttta 11509804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 133 - 305
Target Start/End: Complemental strand, 44080364 - 44080192
Alignment:
Q  133 gaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtg 232  Q
    |||||| |||||| || ||||| ||||||||||||| || ||||||||||| ||||| ||||||||||  |||||||||||||||| |||||||||||||    
T  44080364 gaccactatttttccaaaatttttttggttaactaagtggaaaaatagtgggcacgcacattttagttt-gtgaccacatttttcaacttctaaatagtg 44080266  T
Q  233 gtcacgcaactg-ataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 305  Q
    |||||||||||| | ||||| |||||||| |||  |||||||| ||||||||||||| || |||||||||||||    
T  44080265 gtcacgcaactgcaaaaaatatggtcacacagattatatatttggttaactgaaattgttcagagtggtacaaa 44080192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 132 - 315
Target Start/End: Original strand, 26308640 - 26308823
Alignment:
Q  132 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 231  Q
    ||||||| | |||| |||||||||||||||||| ||| || ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  26308640 tgaccactaattttccagaatttatttggttaagtaagtggaaaaatagtggtcacgcgcattttaattgcgtgaccacattattcagcttctaaatagt 26308739  T
Q  232 ggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtaca 315  Q
    |||| |  || ||  ||||||||| |||| | |||||||||||  |||||||||| |||| |||||  ||||||  ||||||||    
T  26308740 ggtcccagaattggaaaaatgtggccacacaaaccatatatttgattaactgaaaattttcagagttatacaaagaggtgtaca 26308823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 143 - 284
Target Start/End: Complemental strand, 5341974 - 5341833
Alignment:
Q  143 ttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaac 242  Q
    |||||||||||||||||||||||||| || ||||||||||||||   | ||||||||||  ||||||||||||||| ||||||||||||||||||||| |    
T  5341974 ttttcagaatttatttggttaactaagtggaaaaatagtggtcatatgtattttagttgtatgaccacatttttcaacttctaaatagtggtcacgcagc 5341875  T
Q  243 tgataaaatgtggtcacaaagaccatatatttagttaactga 284  Q
    | | ||||| |||||||| | |||||||||||| ||||||||    
T  5341874 taaaaaaatatggtcacacaaaccatatatttaattaactga 5341833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 22432446 - 22432315
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 224  Q
    |||||||||||||| ||||||||| |||||||||||| |||||  || ||||||||||| ||| |||||||||||||  ||||||||||||||||||| |    
T  22432446 agttgcatgaccactattttttcataatttatttggtcaactatgtggaaaaatagtggacacacgcattttagttgattgaccacatttttcagctttt 22432347  T
Q  225 aaatagtggtcacgcaactgataaaatgtggt 256  Q
    ||||||||| ||||||||||| ||||| ||||    
T  22432346 aaatagtggacacgcaactgaaaaaatatggt 22432315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 132 - 254
Target Start/End: Complemental strand, 31545725 - 31545603
Alignment:
Q  132 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 231  Q
    ||||||| |||||| |||||||||||| ||||||||| |  |||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||    
T  31545725 tgaccactatttttccagaatttattttgttaactaagtagaaaaatagtggtcatgcacattttagttgtgtgaccacatttttcagcttctaaatagt 31545626  T
Q  232 ggtcacgcaactgataaaatgtg 254  Q
    ||| || ||||||| ||||||||    
T  31545625 ggttactcaactgaaaaaatgtg 31545603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 132 - 291
Target Start/End: Complemental strand, 19624414 - 19624256
Alignment:
Q  132 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 231  Q
    ||||||| |||||| |||||||||| ||||||||||| || |||||||||||||||| |||||||||||| ||| |||||| ||| ||||| |||||| |    
T  19624414 tgaccacaatttttccagaatttatgtggttaactaagtggaaaaatagtggtcacgtgcattttagttgggtggccacatattttagcttataaata-t 19624316  T
Q  232 ggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaattttt 291  Q
    |||||| |||||||  |||| || ||||  |||| ||||||||  |||||||||||||||    
T  19624315 ggtcacacaactgaagaaatatgatcacttagactatatatttgattaactgaaattttt 19624256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 126 - 344
Target Start/End: Complemental strand, 27707788 - 27707571
Alignment:
Q  126 gttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttcta 225  Q
    |||||||| |||| |||||| ||||||||||||||||||  || ||||||||||||||||| || ||||||||||| | |||||||||||| || ||| |    
T  27707788 gttgcatgtccactatttttccagaatttatttggttaatcaagtgaaaaaatagtggtcatgcacattttagttgtgcgaccacattttttagtttcaa 27707689  T
Q  226 aatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagtt 325  Q
    ||| |||||||| ||| ||| ||||||||| |||| | |||||||||||  |||| |||| ||||| | | || || |||  ||| |||| ||||||| |    
T  27707688 aat-gtggtcacacaattgaaaaaatgtgggcacacaaaccatatatttgattaattgaatttttttaaaatgatataaagaggtatacaaattaaaggt 27707590  T
Q  326 gactatcaatctttattca 344  Q
    | | ||| |||||||||||    
T  27707589 gtcaatctatctttattca 27707571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 125 - 241
Target Start/End: Complemental strand, 42481416 - 42481300
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 224  Q
    |||| ||||||||  ||||||||||||||||||||||||||||| |  ||||||| ||||||||  ||||||||||| ||||||| ||||||||| || |    
T  42481416 agttacatgaccattattttttcagaatttatttggttaactaagtagaaaaataatggtcacgtacattttagttgtgtgaccatatttttcagttttt 42481317  T
Q  225 aaatagtggtcacgcaa 241  Q
    |||||||||||||||||    
T  42481316 aaatagtggtcacgcaa 42481300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 170 - 305
Target Start/End: Complemental strand, 23163400 - 23163264
Alignment:
Q  170 tgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgat--aaaatgtggtcacaaagacca 267  Q
    |||||||||| || ||||| |||||||||||| ||||||| |||||||||| |||| |||||||||| |||||||||  ||||||| |||||| ||||||    
T  23163400 tgaaaaaataatgatcacgtgcattttagttgtgtgaccatatttttcagc-tctacatagtggtcatgcaactgataaaaaatgtagtcacatagacca 23163302  T
Q  268 tatatttagttaactgaaatttttgagagtggtacaaa 305  Q
    ||||||   |||||||| ||||| ||||||||||||||    
T  23163301 tatattagattaactgatattttcgagagtggtacaaa 23163264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 151 - 228
Target Start/End: Original strand, 27335402 - 27335479
Alignment:
Q  151 atttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaat 228  Q
    |||||||||||||||||| || |||||||||||||||| | |||||||||| ||||||||||||||||||||||||||    
T  27335402 atttatttggttaactaagtggaaaaatagtggtcacgtgtattttagttgtgtgaccacatttttcagcttctaaat 27335479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 13358101 - 13358189
Alignment:
Q  141 ttttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaata 229  Q
    |||||||| ||||||||||||||||||  || |||||||||||| |||||||||||| ||| ||||||| |||||||||||||||||||    
T  13358101 ttttttcaaaatttatttggttaactatgtggaaaaatagtggtaacgcgcattttaattgtgtgaccatatttttcagcttctaaata 13358189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 225 - 322
Target Start/End: Original strand, 31545714 - 31545811
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaa 322  Q
    ||||||||||||| ||||| | |||||||||||||| ||||||||||||  |||| ||||||||||| |||||| ||||||| | |||||||||||||    
T  31545714 aaatagtggtcacacaactaaaaaaatgtggtcacatagaccatatattaggttacctgaaatttttcagagtgatacaaaaagatgtacatattaaa 31545811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 150 - 290
Target Start/End: Original strand, 27079314 - 27079453
Alignment:
Q  150 aatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagctt--ctaaatagtggtcacgcaactgata 247  Q
    |||||||||| |||||||| || ||||||  |||||||||||||||||| | |||||||||||||||    ||    |||| ||||||| |||||||| |    
T  27079314 aatttatttgattaactaagtggaaaaatgatggtcacgcgcattttagctacgtgaccacattttt---tttgaaaaaattgtggtcatgcaactgaaa 27079410  T
Q  248 aaatgtggtcacaaagaccatatatttagttaactgaaatttt 290  Q
    || |||||||||| ||||||||||||| |||||| ||||||||    
T  27079411 aattgtggtcacacagaccatatatttggttaaccgaaatttt 27079453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 150 - 290
Target Start/End: Original strand, 27085111 - 27085250
Alignment:
Q  150 aatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagctt--ctaaatagtggtcacgcaactgata 247  Q
    |||||||||| |||||||| || ||||||  |||||||||||||||||| | |||||||||||||||    ||    |||| ||||||| |||||||| |    
T  27085111 aatttatttgattaactaagtggaaaaatgatggtcacgcgcattttagctacgtgaccacattttt---tttgaaaaaattgtggtcatgcaactgaaa 27085207  T
Q  248 aaatgtggtcacaaagaccatatatttagttaactgaaatttt 290  Q
    || |||||||||| ||||||||||||| |||||| ||||||||    
T  27085208 aattgtggtcacacagaccatatatttggttaaccgaaatttt 27085250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 125 - 290
Target Start/End: Original strand, 34627292 - 34627453
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacattttt-cagcttc 223  Q
    |||||| |||| || |||||||  ||||||||||||||||||||||| ||||||| |||| ||  | ||||||||||||||||||||||||| | | ||     
T  34627292 agttgcgtgactactatttttttcgaatttatttggttaactaaatggaaaaataatggttacatgtattttagttgcgtgaccacatttttccgggttt 34627391  T
Q  224 taaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttt 290  Q
    |||||||||  |  |||||||| ||||||| |||||| ||| ||||    |||||||||||||||||    
T  34627392 taaatagtgtccttgcaactgaaaaaatgt-gtcacacagatcata----tagttaactgaaatttt 34627453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 228 - 323
Target Start/End: Complemental strand, 26308648 - 26308553
Alignment:
Q  228 tagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 323  Q
    |||||||||| ||||| | | |||||||||||| | ||||||||||||||||||||| |||||| | |||| |||||||  |||||||||||||||    
T  26308648 tagtggtcacacaactaaaacaatgtggtcacacaaaccatatatttagttaactgatatttttcaaagtgatacaaaaaagtgtacatattaaag 26308553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 151 - 228
Target Start/End: Original strand, 27365008 - 27365085
Alignment:
Q  151 atttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaat 228  Q
    |||||||||||||| ||| || ||||||||||||||| || ||||||| |||||||| ||||||||||| ||||||||    
T  27365008 atttatttggttaattaagtggaaaaatagtggtcacacgtattttagctgcgtgactacatttttcagtttctaaat 27365085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 225 - 321
Target Start/End: Original strand, 3823750 - 3823845
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    ||||||||||||||||||| | |||| ||||||||| |||| |||||||| |||||||| |||||||  |||| ||||||| ||||| |||||||||    
T  3823750 aaatagtggtcacgcaact-aaaaaacgtggtcacacagacaatatatttggttaactggaatttttctgagtagtacaaacgggtgaacatattaa 3823845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 225 - 321
Target Start/End: Original strand, 22432428 - 22432524
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    |||||||||||| |||||| | ||||||| |||||| |||||||||||||  || ||| |||||||| | |||| |||||||||||||||| |||||    
T  22432428 aaatagtggtcatgcaactaaaaaaatgtagtcacacagaccatatatttgatttactcaaatttttcaaagtgctacaaaagggtgtacacattaa 22432524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 224 - 323
Target Start/End: Original strand, 18733572 - 18733670
Alignment:
Q  224 taaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 323  Q
    |||||||| ||||||||||| | ||| |||||||||  | ||||||||||||||||||| |||||||| ||| ||||| ||| ||||||||| |||||||    
T  18733572 taaatagttgtcacgcaactaagaaa-tgtggtcacccataccatatatttagttaacttaaatttttcagaatggtataaaggggtgtacacattaaag 18733670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 224 - 323
Target Start/End: Complemental strand, 27335406 - 27335307
Alignment:
Q  224 taaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 323  Q
    |||||||| ||||||||||| | |||||||||||||| | |||||||  || ||||||| ||| |||| ||| ||||||||| ||||||||| |||||||    
T  27335406 taaatagttgtcacgcaactaaaaaaatgtggtcacacataccatattattggttaactcaaaattttcagaatggtacaaaggggtgtacacattaaag 27335307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 41571904 - 41571797
Alignment:
Q  180 gtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagtta 279  Q
    |||||||||  |||||||  || |||| ||||||||||| ||| ||||||||||||||| |||||| |||||||||| ||| | |||||||||||  ||     
T  41571904 gtggtcacgtacattttaactgtgtgatcacatttttcaacttttaaatagtggtcacgtaactgaaaaaatgtggttacatataccatatatttgattg 41571805  T
Q  280 actgaaat 287  Q
    ||||||||    
T  41571804 actgaaat 41571797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 11501371 - 11501309
Alignment:
Q  140 attttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgc 202  Q
    ||||||| | ||||||||||||||||||| || ||||||||||||||||| ||||||||||||    
T  11501371 atttttttaaaatttatttggttaactaattggaaaaatagtggtcacgcacattttagttgc 11501309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 228 - 321
Target Start/End: Original strand, 19280298 - 19280391
Alignment:
Q  228 tagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    |||||||||| | ||| | ||||||| |||||| |||||||||||||  |||||| ||| |||| ||||||||||||| ||||||||| |||||    
T  19280298 tagtggtcacaccacttaaaaaatgttgtcacacagaccatatatttgattaactaaaaattttcagagtggtacaaacgggtgtacacattaa 19280391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 151 - 228
Target Start/End: Original strand, 27326047 - 27326124
Alignment:
Q  151 atttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaat 228  Q
    |||||||| |||||| || || |||||||||||||||  | ||||||||||||||||||||||||| || ||||||||    
T  27326047 atttatttagttaaccaactggaaaaatagtggtcacatgtattttagttgcgtgaccacattttttagtttctaaat 27326124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 151 - 228
Target Start/End: Original strand, 27332284 - 27332361
Alignment:
Q  151 atttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaat 228  Q
    |||||||| |||||| || || |||||||||||||||  | ||||||||||||||||||||||||| || ||||||||    
T  27332284 atttatttagttaaccaactggaaaaatagtggtcacatgtattttagttgcgtgaccacattttttagtttctaaat 27332361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 314
Target Start/End: Original strand, 5341996 - 5342063
Alignment:
Q  247 aaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtac 314  Q
    |||||||||||||| ||||||||||||   ||||||||||||||| ||||| ||||||| ||||||||    
T  5341996 aaaatgtggtcacacagaccatatattcgattaactgaaatttttcagagtcgtacaaaggggtgtac 5342063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 39126263 - 39126189
Alignment:
Q  141 ttttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacattttt 216  Q
    |||||| | ||||||||||||||||||| || |||||||||| || ||||| |||||||||||| |||||||||||    
T  39126263 tttttttaaaatttatttggttaactaagtggaaaaatagtgatcgcgcgc-ttttagttgcgtaaccacattttt 39126189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 225 - 321
Target Start/End: Original strand, 3786060 - 3786153
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    ||||||||||||||||||| | |||| ||||||||| |||| |||||||| |||||||| |||||||  |||||||  ||| ||||| |||||||||    
T  3786060 aaatagtggtcacgcaact-aaaaaacgtggtcacacagacaatatatttggttaactggaatttttctgagtggt--aaacgggtgaacatattaa 3786153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 228 - 305
Target Start/End: Original strand, 27040683 - 27040760
Alignment:
Q  228 tagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 305  Q
    |||||||||||||||||| ||| |||| ||||| ||| ||||||||| |||||| ||||||||  ||||| |||||||    
T  27040683 tagtggtcacgcaactgaaaaattgtgatcacacagatcatatatttggttaaccgaaattttctagagtagtacaaa 27040760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 225 - 274
Target Start/End: Complemental strand, 34164375 - 34164326
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatattt 274  Q
    |||||||||||||||| || |||||||||||||||| |||||||||||||    
T  34164375 aaatagtggtcacgcaccttataaaatgtggtcacacagaccatatattt 34164326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 238 - 305
Target Start/End: Complemental strand, 11501310 - 11501244
Alignment:
Q  238 gcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 305  Q
    |||||||| |||||||||||||| ||||||||||||| ||||  ||||| |||| |||||||||||||    
T  11501310 gcaactga-aaaatgtggtcacacagaccatatatttggttatttgaaaattttcagagtggtacaaa 11501244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 23163837 - 23163787
Alignment:
Q  160 gttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccac 210  Q
    ||||||||| |||| ||||||||||||||  ||||||||||||||||||||    
T  23163837 gttaactaagtgaagaaatagtggtcacgtacattttagttgcgtgaccac 23163787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 39126263 - 39126329
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaattttt 291  Q
    ||||||| ||||||||||| | ||||||| |||||| ||| ||||||||| ||||||| ||||||||    
T  39126263 aaatagtagtcacgcaactaaaaaaatgttgtcacacagatcatatatttggttaacttaaattttt 39126329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 33488333 - 33488406
Alignment:
Q  224 taaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagt 297  Q
    |||||||||||| ||||||| | || ||| ||||| | | ||||||||||||||||||| |||||||| |||||    
T  33488333 taaatagtggtcgcgcaactaaaaatatgcggtcatacataccatatatttagttaacttaaatttttcagagt 33488406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 303
Target Start/End: Original strand, 13358996 - 13359052
Alignment:
Q  247 aaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtaca 303  Q
    ||||| || ||||| |||||||||||||| ||||||||||||||  |||||||||||    
T  13358996 aaaatatgatcacacagaccatatatttaattaactgaaattttccagagtggtaca 13359052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 186
Target Start/End: Complemental strand, 11510027 - 11509989
Alignment:
Q  148 agaatttatttggttaactaaatgaaaaaatagtggtca 186  Q
    ||||||||||| ||||||||| |||||||||||||||||    
T  11510027 agaatttatttagttaactaattgaaaaaatagtggtca 11509989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 343
Target Start/End: Complemental strand, 31545490 - 31545424
Alignment:
Q  277 ttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatcaatctttattc 343  Q
    |||||||||||||| |||||| ||||||| || | |||| ||||||| || ||| ||||||||||||    
T  31545490 ttaactgaaattttcgagagtagtacaaagggatatacacattaaaggtgtctaccaatctttattc 31545424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 313
Target Start/End: Complemental strand, 1705642 - 1705593
Alignment:
Q  264 accatatatttagttaactgaaatttttgagagtggtacaaaagggtgta 313  Q
    |||||||||||||| |||| |||||||| ||||||||| ||| |||||||    
T  1705642 accatatatttagtaaacttaaatttttcagagtggtagaaaggggtgta 1705593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 3823869 - 3823797
Alignment:
Q  22 aagagcaatgataggtaggcacccttaatgatatgtacattcatttgtactattctgaaaaatttcagttaaccaa 97  Q
    |||||||||||||||||| ||||||||||   |||| ||  | ||||||||| || |||||||| |||||||||||    
T  3823869 aagagcaatgataggtagacacccttaat---atgttcacccgtttgtactactcagaaaaattccagttaaccaa 3823797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 18733495 - 18733430
Alignment:
Q  225 aaatagtggtcacgcaactga-taaaatgtggtcacaaagaccatatatttagttaactgaaattt 289  Q
    ||||||| |||||||||| || ||||||||||| ||| | ||||||||||| ||||| ||||||||    
T  18733495 aaatagtagtcacgcaaccgaataaaatgtggtaacacaaaccatatatttggttaattgaaattt 18733430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 141; Significance: 1e-73; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 127 - 343
Target Start/End: Complemental strand, 43900642 - 43900426
Alignment:
Q  127 ttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaa 226  Q
    |||| ||||| | |||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  43900642 ttgcgtgacccctattttttcagaatttatttggttaactaaatagaaaaatagtggtcacgtgcattttagttgcgtgaccacatttttcagcttctaa 43900543  T
Q  227 atagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttg 326  Q
    ||||||||||| ||||||| |||||||| ||||| |||||||||||||||||| |||||||||| ||||||||||||||| | | |||| ||||||  ||    
T  43900542 atagtggtcacacaactgaaaaaatgtgatcacacagaccatatatttagttacctgaaattttcgagagtggtacaaaatgatctacacattaaaagtg 43900443  T
Q  327 actatcaatctttattc 343  Q
     ||||||||||||||||    
T  43900442 tctatcaatctttattc 43900426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 132 - 344
Target Start/End: Original strand, 30906051 - 30906263
Alignment:
Q  132 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 231  Q
    ||||||| || ||| || |||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  30906051 tgaccactatgtttccataatttatttgcttaactaagtggaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcatttaaatagt 30906150  T
Q  232 ggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactat 331  Q
    ||||||| |||||| |||  ||||||||  ||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||| ||  ||     
T  30906151 ggtcacgaaactgaaaaatggtggtcacgcagaccatatatttggttaactgaaatttttcagagtggtacaaaagggtgtacacattaaaggtgtgtac 30906250  T
Q  332 caatctttattca 344  Q
    | |||||||||||    
T  30906251 ccatctttattca 30906263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 140 - 321
Target Start/End: Complemental strand, 45306067 - 45305887
Alignment:
Q  140 attttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgc 239  Q
    ||||||| |||||||||| |||||||||| || ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||    
T  45306067 atttttttagaatttattcggttaactaagtggaaaaatagtggtcacgcacattttagttgcgtggccacatttttcagcttttaaat-gtggtcacgc 45305969  T
Q  240 aactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    |||||| ||||| |||||| | |||| ||||||||  ||||||||||||||| ||||||||||||| | |||||||||||||    
T  45305968 aactgaaaaaatatggtcatacagactatatatttgattaactgaaattttttagagtggtacaaaggagtgtacatattaa 45305887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 24 - 260
Target Start/End: Original strand, 1400667 - 1400901
Alignment:
Q  24 gagcaatgataggtaggcacccttaatgatatgtacattcatttgtactattctgaaaaatttcagttaaccaa---tatggtatgcatgacctcannnn 120  Q
    ||||||| |||||||| |||||||||||   ||||||  | ||||||| | |||||||||||||||||||||||   |||||||||  ||||| ||        
T  1400667 gagcaataataggtagacacccttaatg---tgtacacccttttgtaccaatctgaaaaatttcagttaaccaaatatatggtatgtgtgaccacatttt 1400763  T
Q  121 nnncagttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagc 220  Q
        |||||| ||||||| |||||| || ||||||||||||||||||| || |||||||||| ||||||||||||| |||| ||||||||||||||||||    
T  1400764 tta-agttgcgtgaccactatttttccataatttatttggttaactaagtggaaaaatagtgatcacgcgcatttttgttgtgtgaccacatttttcagc 1400862  T
Q  221 ttctaaatagtggtcacgcaactgataaaatgtggtcaca 260  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  1400863 ttctaaatagtggtcacgcaactga-aaaatgtggtcaca 1400901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 125 - 255
Target Start/End: Original strand, 28527316 - 28527445
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 224  Q
    |||||| ||||||| |||||| |||||||||||||||||||||| || ||||||||||||||| ||||| |||||| |||||| ||||||| ||||||||    
T  28527316 agttgcgtgaccactatttttccagaatttatttggttaactaattggaaaaatagtggtcacacgcatgttagtt-cgtgacaacattttccagcttct 28527414  T
Q  225 aaatagtggtcacgcaactgataaaatgtgg 255  Q
    ||||  ||||||||||||| | |||||||||    
T  28527415 aaattatggtcacgcaactaaaaaaatgtgg 28527445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 52 - 228
Target Start/End: Complemental strand, 33667506 - 33667328
Alignment:
Q  52 atatgtacattcatttgtactattctgaaaaatttcagttaaccaa---tatggtatgcatgacctcannnnnnncagttgcatgaccaccattttttca 148  Q
    ||||||||| || ||||||| | |||||||||||| ||||||||||   ||||||||| |||| | ||        |||||| ||||||| |||||||||    
T  33667506 atatgtacactcttttgtaccactctgaaaaattttagttaaccaaatatatggtatgtatgaacacatttttta-agttgcgtgaccactattttttca 33667408  T
Q  149 gaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaat 228  Q
    |||| ||||||||||||||| || |||||||||||| |||| ||||||| |||||||||||||||||||| |||||||||    
T  33667407 gaatatatttggttaactaagtggaaaaatagtggttacgcacattttaattgcgtgaccacatttttcaacttctaaat 33667328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 225 - 321
Target Start/End: Complemental strand, 1400785 - 1400689
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    ||||||||||||||||||| | |||||||||||||| | ||||||||||| |||||||||||||||| ||| ||||||||||||||||||| |||||    
T  1400785 aaatagtggtcacgcaacttaaaaaatgtggtcacacataccatatatttggttaactgaaatttttcagattggtacaaaagggtgtacacattaa 1400689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 125 - 308
Target Start/End: Original strand, 7378463 - 7378643
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 224  Q
    |||||| |||| || ||||||| | |||||| | |||||| ||| || || |||||||||||| | |||||||||||||| |||| |||||| |||||||    
T  7378463 agttgcgtgactactatttttttaaaatttaat-ggttaattaagtggaataatagtggtcacacacattttagttgcgtcaccatattttt-agcttct 7378560  T
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagg 308  Q
    |||| ||||| |||||||||| ||||| |||||||| | ||||||||||| ||||||||||||||||  || |||| |||||||    
T  7378561 aaat-gtggttacgcaactgaaaaaatatggtcacacaaaccatatattttgttaactgaaatttttctgaatggtgcaaaagg 7378643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 225 - 315
Target Start/End: Complemental strand, 28527334 - 28527244
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtaca 315  Q
    ||||||||||||||||||| | |||||||||||||| ||||||||||||| |||| ||||||||||| | ||||||||||| |||||||||    
T  28527334 aaatagtggtcacgcaactaaaaaaatgtggtcacacagaccatatatttggttagctgaaatttttcaaagtggtacaaaggggtgtaca 28527244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 225 - 321
Target Start/End: Original strand, 33667413 - 33667509
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    ||||||||||||||||||| | |||||||| ||| | | ||||||||||| ||||||| |||||||| ||||||||||||||| |||||||||||||    
T  33667413 aaatagtggtcacgcaacttaaaaaatgtgttcatacataccatatatttggttaactaaaatttttcagagtggtacaaaagagtgtacatattaa 33667509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 247 - 321
Target Start/End: Original strand, 41212426 - 41212500
Alignment:
Q  247 aaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    |||||||||||||| ||||||||||||| ||||||| |||||||| ||||||||||||| |||| ||||||||||    
T  41212426 aaaatgtggtcacacagaccatatatttggttaacttaaatttttcagagtggtacaaaggggtatacatattaa 41212500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 321
Target Start/End: Complemental strand, 30906060 - 30905966
Alignment:
Q  227 atagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    ||||||||||| ||||| |  ||||||||||||| |||| |||||| | ||||||| ||| |||| ||| || |||||| || |||||| |||||    
T  30906060 atagtggtcacacaactaaataaatgtggtcacacagacaatatatctggttaactaaaaattttcagaatgttacaaagggatgtacacattaa 30905966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 34175209 - 34175155
Alignment:
Q  151 atttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtg 205  Q
    |||||||||||||||||| || ||||||||  ||||| | |||||||||||||||    
T  34175209 atttatttggttaactaagtggaaaaatagcagtcacacacattttagttgcgtg 34175155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 129; Significance: 1e-66; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 153 - 321
Target Start/End: Complemental strand, 9809162 - 9808994
Alignment:
Q  153 ttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgataaaatg 252  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  9809162 ttatttggttaactaaatggaaaaatagtggtcacgcgcatttgagttgcgtgactacatttttcagcttctaaatagtggtcacgcaactgaaaaaatg 9809063  T
Q  253 tggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    |||||||  |||||||||||||||||||||||| ||||| | || ||||||||||||||||||||||||    
T  9809062 tggtcacgcagaccatatatttagttaactgaattttttcatagcggtacaaaagggtgtacatattaa 9808994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 128 - 321
Target Start/End: Original strand, 17633337 - 17633530
Alignment:
Q  128 tgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcag-cttctaa 226  Q
    ||||||||||| |||| | || ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||  ||||||     
T  17633337 tgcatgaccacaatttgtccaaaatttatttggttaactaagttaaaaaatagtggtcacgcgcattttagttgcgtgaccatatttttcaaacttctag 17633436  T
Q  227 atagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    || |||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||| | ||||||||||| |||||||||||||||    
T  17633437 at-gtggtcacgcaactgaaaaaatgtggtcacacagaccatatatttggttaactgaaatttttcaaagtggtacaaaggggtgtacatattaa 17633530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 141 - 321
Target Start/End: Complemental strand, 9810860 - 9810680
Alignment:
Q  141 ttttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgca 240  Q
    |||||||| || ||||||||||||||||||| |||||||| |||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  9810860 ttttttcataaattatttggttaactaaatggaaaaatagaggtcacgcacatttgagttgcgtgactacattttttagcttctaaatagtggtcacgca 9810761  T
Q  241 actgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    ||||| |||||||||| ||  | |||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||    
T  9810760 actgaaaaaatgtggtaacgcaaaccatatatttaattaactgaaatttttcatagtggtacaaaagggtgtacatattaa 9810680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 125 - 341
Target Start/End: Complemental strand, 16583712 - 16583496
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 224  Q
    |||||| |||| || |||||  || ||||||||||||||| ||| || |||||||||||||||||||||||||||||| ||| || ||||||||||||||    
T  16583712 agttgcgtgactactattttaccataatttatttggttaattaagtggaaaaatagtggtcacgcgcattttagttgcatgatcatatttttcagcttct 16583613  T
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagt 324  Q
    ||||||||||||||||||||| ||||||||||||||   ||||||||||| ||||||||||||||| |||||||||||||| || |||||  ||||| |     
T  16583612 aaatagtggtcacgcaactgaaaaaatgtggtcacatcaaccatatatttggttaactgaaattttcgagagtggtacaaagggatgtacgcattaaggg 16583513  T
Q  325 tgactatcaatctttat 341  Q
    || ||| ||||||||||    
T  16583512 tgtctaccaatctttat 16583496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 150 - 321
Target Start/End: Original strand, 55666844 - 55667013
Alignment:
Q  150 aatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgataaa 249  Q
    |||||||||| |||||||| || ||||||||||||||||  |||||||||| ||||||||| ||||||||||| |||||| ||||||||||||||| |||    
T  55666844 aatttatttgcttaactaagtggaaaaatagtggtcacgaacattttagtt-cgtgaccacgtttttcagcttataaataatggtcacgcaactga-aaa 55666941  T
Q  250 atgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    ||||||||||| ||||||||||||||||||||||||||||| || ||||||||||| | |||||||||||||    
T  55666942 atgtggtcacacagaccatatatttagttaactgaaattttcgaaagtggtacaaaggagtgtacatattaa 55667013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 132 - 341
Target Start/End: Complemental strand, 19596891 - 19596680
Alignment:
Q  132 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 231  Q
    ||||||| || |||||||||||||||||||||||||| ||   ||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |    
T  19596891 tgaccactatgttttcagaatttatttggttaactaagtgggtaaatagtagtcatgcgcattttagttgcgtgaccacatttttcagcttctaaataat 19596792  T
Q  232 ggtcacgcaactg--ataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgact 329  Q
    ||| || || |||  | |||||||||||||   |||||||||||| || ||| || |||||| ||||||||||||| ||||||||| ||||||| || ||    
T  19596791 ggttacacagctgaaaaaaaatgtggtcacgctgaccatatatttggtcaacagagatttttcagagtggtacaaaggggtgtacacattaaagatgtct 19596692  T
Q  330 atcaatctttat 341  Q
    ||||||||||||    
T  19596691 atcaatctttat 19596680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 150 - 344
Target Start/End: Original strand, 8740809 - 8741003
Alignment:
Q  150 aatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactg-ataa 248  Q
    ||||||||| ||||||||| |  |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||| | ||    
T  8740809 aatttatttagttaactaagtagaaaaatagtggtcacgcgcattttagta-cgtgaccacatttttcagcttctaaatagtgatcacgcaactgaaaaa 8740907  T
Q  249 aatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatcaatctttattca 344  Q
    ||| |||||||| ||| |||| ||||  |||||||||| ||||||||||| ||||||||  |||||| ||| ||| || ||| | |||||||||||    
T  8740908 aatatggtcacacagatcatacatttgattaactgaaaattttgagagtgatacaaaagaatgtacacattgaagatgtctaccgatctttattca 8741003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 125 - 260
Target Start/End: Original strand, 1966826 - 1966961
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 224  Q
    |||||| ||||||| | |||| |||||||||||||||||| ||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1966826 agttgcgtgaccactagttttccagaatttatttggttaattaagtggaaaaatagtggtcacgcgcattt-agttgcgtgaccacatttttcagcttct 1966924  T
Q  225 aaatagtggtcacgcaact-gataaaatgtggtcaca 260  Q
    |||||||||||||||||||  | ||||||||||||||    
T  1966925 aaatagtggtcacgcaactaaaaaaaatgtggtcaca 1966961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 132 - 301
Target Start/End: Original strand, 33179759 - 33179928
Alignment:
Q  132 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 231  Q
    ||||||| | ||||| |||||||||||| |||||||| || ||||||||||||||| ||||||||||||| ||| ||||||||||||  |||||||||||    
T  33179759 tgaccactacttttttagaatttatttgattaactaagtggaaaaatagtggtcacacgcattttagttgtgtggccacatttttcactttctaaatagt 33179858  T
Q  232 ggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggta 301  Q
    ||||||||| |||| || || |||| ||| | ||||||||||||||||| | ||||||| || |||||||    
T  33179859 ggtcacgcagctgaaaagatatggtaacacataccatatatttagttaattaaaattttcgatagtggta 33179928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 150 - 291
Target Start/End: Original strand, 35544438 - 35544578
Alignment:
Q  150 aatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgataaa 249  Q
    ||||||||| ||||| ||| || |||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||  |||| || |||    
T  35544438 aatttatttagttaattaagtggaaaaatagtgatcacacgcattt-agttgcgtgaccacatttttcagcttctaaatagtggtcatacaacggaaaaa 35544536  T
Q  250 atgtggtcacaaagaccatatatttagttaactgaaattttt 291  Q
    ||||| ||||| | |||||||||||  |||||||||||||||    
T  35544537 atgtgatcacacataccatatatttgattaactgaaattttt 35544578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 141 - 303
Target Start/End: Complemental strand, 2433811 - 2433654
Alignment:
Q  141 ttttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgca 240  Q
    |||||||| |||||||||||||||| || ||||||||||||||||||| |||||||  || | |||||||||||||||||||||||||||||||||  ||    
T  2433811 ttttttcataatttatttggttaacaaagtgaaaaaatagtggtcacgtgcatttttttt-catgaccacatttttcagcttctaaatagtggtcaaaca 2433713  T
Q  241 actgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtaca 303  Q
    ||||| |||||||| ||||    | |||||||||  |||| |||||||||| | |||||||||    
T  2433712 actgaaaaaatgtgatcac----atcatatatttgattaattgaaatttttcaaagtggtaca 2433654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 132 - 245
Target Start/End: Original strand, 33249616 - 33249729
Alignment:
Q  132 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 231  Q
    ||||||| | ||||||| |||||||||| |||||||  || ||||||||||||||| |||||||||  ||||||||||||||||||| ||||||||||||    
T  33249616 tgaccactactttttcaaaatttatttgattaactaggtggaaaaatagtggtcacacgcattttatgtgcgtgaccacatttttcaccttctaaatagt 33249715  T
Q  232 ggtcacgcaactga 245  Q
    ||||||||||||||    
T  33249716 ggtcacgcaactga 33249729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 134 - 290
Target Start/End: Complemental strand, 42908675 - 42908520
Alignment:
Q  134 accaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccaca-tttttcagcttctaaatagtg 232  Q
    ||||| |||||| ||||||||||||||||||||||  | ||| |||||||||||||||||||||||||||||| |||| ||||||| ||| ||||| |||    
T  42908675 accactatttttccagaatttatttggttaactaagaggaaacatagtggtcacgcgcattttagttgcgtgatcacattttttcaacttttaaat-gtg 42908577  T
Q  233 gtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttt 290  Q
    ||||| ||||||| ||||| |||||| | ||||||||||||| ||| ||| |||||||    
T  42908576 gtcacacaactga-aaaatatggtcaaacagaccatatatttggttcactaaaatttt 42908520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 224 - 315
Target Start/End: Original strand, 24669270 - 24669361
Alignment:
Q  224 taaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtaca 315  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||  |||||| |||||||| ||||||||||||| |||||||||    
T  24669270 taaatagtggtcacgcaactgaaaaaatgtggtcacacagaccatatatttgattaacttaaatttttcagagtggtacaaaggggtgtaca 24669361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 125 - 305
Target Start/End: Complemental strand, 14351178 - 14351000
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 224  Q
    |||||| ||||||| |||||  || ||||||||||||||||||| || |||||||||||||| |  |||||||||||||||| ||||| ||| ||||||     
T  14351178 agttgcgtgaccactattttgacaaaatttatttggttaactaagtggaaaaatagtggtcatggacattttagttgcgtgatcacatcttttagcttca 14351079  T
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 305  Q
    |||||||||| | |||| ||  ||||||||  || | | |   ||||||| ||||||||||||||| ||||||||| ||||    
T  14351078 aaatagtggttatgcaattg--aaaatgtgaccatacaaattgtatatttggttaactgaaattttcgagagtggtgcaaa 14351000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 151 - 290
Target Start/End: Complemental strand, 24669274 - 24669123
Alignment:
Q  151 atttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct-----------aaatagtggtcacgc 239  Q
    |||||||||||||||||| |||||||||||||||||| || |||||||||||||||||| |||||| || ||||           |||||||||||||||    
T  24669274 atttatttggttaactaagtgaaaaaatagtggtcacacgaattttagttgcgtgaccatatttttgagtttctaaatgctgaaaaaatagtggtcacgc 24669175  T
Q  240 aactgataaaatgtggtcacaaagaccat-atatttagttaactgaaatttt 290  Q
    |||||| |||||||||||||| | ||||| |||||| | ||||| |||||||    
T  24669174 aactgaaaaaatgtggtcacacataccataatatttggctaacttaaatttt 24669123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 228 - 313
Target Start/End: Complemental strand, 1966841 - 1966758
Alignment:
Q  228 tagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgta 313  Q
    |||||||||||||||| | |||||||||||||| ||||||||||||| ||||||||||| |||| |||||||||||||||||||||    
T  1966841 tagtggtcacgcaactaa-aaaatgtggtcacacagaccatatatttggttaactgaaa-ttttcagagtggtacaaaagggtgta 1966758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 194 - 260
Target Start/End: Complemental strand, 20874880 - 20874814
Alignment:
Q  194 tttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgataaaatgtggtcaca 260  Q
    ||||||||||| |||||||||||||||||||||| |||| |||||||||||| ||||| ||||||||    
T  20874880 tttagttgcgttaccacatttttcagcttctaaaaagtgatcacgcaactgaaaaaatatggtcaca 20874814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 225 - 323
Target Start/End: Original strand, 42908666 - 42908763
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 323  Q
    |||||||||| || ||||| | |||||||||||||| | ||||||||||| ||||||| |||||||| ||||||||||||| | ||| |||||||||||    
T  42908666 aaatagtggtgactcaactaa-aaaatgtggtcacacataccatatatttggttaacttaaatttttcagagtggtacaaatgagtgcacatattaaag 42908763  T

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Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 225 - 305
Target Start/End: Original strand, 14351160 - 14351240
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 305  Q
    |||||||||||||||||||   ||||| |||||||| | ||||||||||| ||||||| || |||||||||||||||||||    
T  14351160 aaatagtggtcacgcaactagaaaaatatggtcacacaaaccatatatttggttaactaaattttttgagagtggtacaaa 14351240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 247 - 323
Target Start/End: Complemental strand, 17633331 - 17633255
Alignment:
Q  247 aaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 323  Q
    |||||||||||||| ||||||||||||| ||||||| ||||||||  |||||||||||| | ||||||| |||||||    
T  17633331 aaaatgtggtcacacagaccatatatttggttaactaaaatttttcggagtggtacaaatgagtgtacacattaaag 17633255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 249 - 343
Target Start/End: Original strand, 19746939 - 19747033
Alignment:
Q  249 aatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatcaatctttattc 343  Q
    |||||||||| | ||||||| ||||||||||||||||||||| |||| || |||||| ||||||||| ||||||  || |||  |||||||||||    
T  19746939 aatgtggtcaaacagaccatgtatttagttaactgaaattttcgagaatgatacaaaggggtgtacacattaaaagtgtctactaatctttattc 19747033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 249 - 343
Target Start/End: Complemental strand, 19792867 - 19792773
Alignment:
Q  249 aatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatcaatctttattc 343  Q
    |||||||||| | ||||||| ||||||||||||||||||||| |||| || |||||| ||||||||| ||||||  || |||  |||||||||||    
T  19792867 aatgtggtcaaacagaccatgtatttagttaactgaaattttcgagaatgatacaaaggggtgtacacattaaaagtgtctactaatctttattc 19792773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 231 - 305
Target Start/End: Original strand, 9810866 - 9810941
Alignment:
Q  231 tggtcacgcaactgataaaa-tgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 305  Q
    ||||||||||||| | |||| |||||||||| ||||||||||||| ||||||| ||| |||  |||||||||||||    
T  9810866 tggtcacgcaactaaaaaaaatgtggtcacacagaccatatatttggttaacttaaaatttctagagtggtacaaa 9810941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 255 - 342
Target Start/End: Original strand, 25007625 - 25007711
Alignment:
Q  255 gtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatcaatctttatt 342  Q
    |||||| ||||||||||||| ||||||||||||||| |||| |||||| |||||||||| | |||||   || ||| |||||||||||    
T  25007625 gtcacatagaccatatatttggttaactgaaattttcgagaatggtac-aaagggtgtatacattaagagtgtctaccaatctttatt 25007711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 250
Target Start/End: Original strand, 1966978 - 1967016
Alignment:
Q  212 tttttcagcttctaaatagtggtcacgcaactgataaaa 250  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  1966978 tttttcagcttctaaatagtggtcacgcaactgaaaaaa 1967016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 321
Target Start/End: Original strand, 19596882 - 19596977
Alignment:
Q  227 atagtggtcacgcaactgataaaa-tgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    |||||||||||||| || | |||| ||||||||||   ||||||||||| |||||||||||||||  | |  ||||||||||| |||||| |||||    
T  19596882 atagtggtcacgcagctaaaaaaaatgtggtcacacgtaccatatatttggttaactgaaattttccaaaagggtacaaaaggatgtacacattaa 19596977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 310
Target Start/End: Complemental strand, 8740796 - 8740715
Alignment:
Q  228 tagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggt 310  Q
    |||||||||| ||||| | |||||||||||||| | |||||||||||  ||||||  ||||||| |||||||| |||| ||||    
T  8740796 tagtggtcac-caactaaaaaaatgtggtcacataaaccatatatttgattaacttgaatttttcagagtggtgcaaaggggt 8740715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 247 - 305
Target Start/End: Original strand, 9809196 - 9809254
Alignment:
Q  247 aaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 305  Q
    |||||||||||||| |||||||||| || ||||||| ||| |||  |||||||||||||    
T  9809196 aaaatgtggtcacacagaccatatacttggttaacttaaaatttctagagtggtacaaa 9809254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 320
Target Start/End: Complemental strand, 33249622 - 33249554
Alignment:
Q  252 gtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatatta 320  Q
    ||||||||| | |||| ||||||  ||||||| ||||||| ||| ||||| |||| |||||||||||||    
T  33249622 gtggtcacacataccacatatttgattaactggaattttttagaatggtataaaaaggtgtacatatta 33249554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 125; Significance: 4e-64; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 125 - 321
Target Start/End: Complemental strand, 22608476 - 22608281
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 224  Q
    |||||| ||||||| | |||||||||| ||||||| |||||||| | ||||||||||||||| || |||||||||||| |||||||||||||||||||||    
T  22608476 agttgcgtgaccactaatttttcagaaattatttgattaactaattcaaaaaatagtggtcatgcacattttagttgcatgaccacatttttcagcttct 22608377  T
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    ||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||| |||||||||||||||||||||| ||||||||| |||||    
T  22608376 aaatagtggtcacgcaactga-aaaatgtagtcacacagaccatatatttggttaactaaaatttttgagagtggtacaaaggggtgtacacattaa 22608281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 141 - 321
Target Start/End: Original strand, 33815025 - 33815198
Alignment:
Q  141 ttttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgca 240  Q
    |||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33815025 ttttttcagaatttatttggttaactaagtggaaaaatggtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgca 33815124  T
Q  241 actgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    ||||| |||||||||||||| |||| |||||||||||||| |||| |||       ||||||||||||||||||| |||||    
T  33815125 actgaaaaaatgtggtcacacagactatatatttagttaattgaagttt-------tggtacaaaagggtgtacacattaa 33815198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 127 - 302
Target Start/End: Original strand, 10304695 - 10304870
Alignment:
Q  127 ttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaa 226  Q
    |||| |||||||  ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  10304695 ttgcgtgaccactttttttccagaatttatttggttaactaagtgaaaaaatagtggtcacgcgcattttagttgcgtgaccgtatttttctgcttctaa 10304794  T
Q  227 atagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtac 302  Q
    |||||| |||||||||||| |||||||||||||| ||||||||||||||||| ||| ||||||| |||||| ||||    
T  10304795 atagtgatcacgcaactgaaaaaatgtggtcacacagaccatatatttagttcactaaaattttcgagagtagtac 10304870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 142 - 341
Target Start/End: Complemental strand, 3222530 - 3222332
Alignment:
Q  142 tttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaa 241  Q
    |||| |||||||||||||||||||||| || ||||||||||||||||  |||||||||||||||||| ||||||||||| | ||||||||||||||||||    
T  3222530 ttttccagaatttatttggttaactaagtggaaaaatagtggtcacgtacattttagttgcgtgaccgcatttttcagcatttaaatagtggtcacgcaa 3222431  T
Q  242 ctgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatcaatctttat 341  Q
    |||| |||||||||||||| | ||||||||||| ||||  |||||||||| |||||  ||| |||||||||||| ||||| | || ||||||||||||||    
T  3222430 ctgaaaaaatgtggtcacagacaccatatatttggttatttgaaatttttaagagtaatac-aaagggtgtacacattaagggtgtctatcaatctttat 3222332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 132 - 340
Target Start/End: Complemental strand, 23595253 - 23595055
Alignment:
Q  132 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 231  Q
    ||||||| | ||||||||||||||||| ||||||||| || ||||||||||| ||||||        |||  ||||||||||||||||||||||||||||    
T  23595253 tgaccactaatttttcagaatttattttgttaactaagtggaaaaatagtggccacgcg--------ttg--tgaccacatttttcagcttctaaatagt 23595164  T
Q  232 ggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactat 331  Q
     ||||| ||||| | ||||| |||||||| ||||||||||||||||||||| ||||||| ||||||| |||||||||||||||| ||||||| || ||      
T  23595163 tgtcacacaactaaaaaaatatggtcacacagaccatatatttagttaacttaaattttcgagagtgatacaaaagggtgtacacattaaaggtgtctcc 23595064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 138708 - 138820
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 224  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||| || ||||||||||||| ||| || |||||||||||||||||||||||||||||||    
T  138708 agttgcgtgaccactattttttcagaatttatttggttgactaagtggaaaaatagtggtcgcgcacaatttagttgcgtgaccacatttttcagcttct 138807  T
Q  225 aaatagtggtcac 237  Q
    |||||||||||||    
T  138808 aaatagtggtcac 138820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 146729 - 146841
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 224  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||| || ||||||||||||| ||| || |||||||||||||||||||||||||||||||    
T  146729 agttgcgtgaccactattttttcagaatttatttggttgactaagtggaaaaatagtggtcgcgcacaatttagttgcgtgaccacatttttcagcttct 146828  T
Q  225 aaatagtggtcac 237  Q
    |||||||||||||    
T  146829 aaatagtggtcac 146841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 133 - 343
Target Start/End: Original strand, 3620761 - 3620970
Alignment:
Q  133 gaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtg 232  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    |||||||||| |||| ||||||||||| |||||||||||||    
T  3620761 gaccactattttttcagaatttatttggttaactaagtgaaaaaatagtggtcacatatattttagttgtgtgatcacatttttcaacttctaaatagtg 3620860  T
Q  233 gtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatc 332  Q
     |||||| | ||| ||| |||  || || |||||| ||||||  |||||||||||||| || | | |||||||  | |||||| ||||| |  |||||||    
T  3620861 atcacgcgattga-aaattgtattcgcacagaccacatatttgattaactgaaattttcgaaaatagtacaaagcgatgtacacattaaggccgactatc 3620959  T
Q  333 aatctttattc 343  Q
    |||||||||||    
T  3620960 aatctttattc 3620970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 152 - 313
Target Start/End: Complemental strand, 9474718 - 9474562
Alignment:
Q  152 tttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgataaaat 251  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||| || ||||||||||||||| ||||||||       ||||||||||||| |||||    
T  9474718 tttatttggttaactaagtgaaaaaatagtggtcacacgcatttta-tttcgtgaccacattttttagcttcta-------gtcacgcaactgaaaaaat 9474627  T
Q  252 gtg--gtcacaaagaccatatatttagttaactgaaattttt-gagagtggtacaaaagggtgta 313  Q
    |||  |||| | ||| |||||| |||| ||||||||||||||  |||||||||||||||| ||||    
T  9474626 gtggtgtcatatagatcatatagttagctaactgaaatttttcaagagtggtacaaaaggatgta 9474562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 225 - 321
Target Start/End: Original strand, 9068503 - 9068599
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    ||||||||||||||||||| | |||||||||||||| | |||||||||||  |||||| |||||||| ||||||||||||||||||||||| |||||    
T  9068503 aaatagtggtcacgcaactaaaaaaatgtggtcacacataccatatatttgattaactaaaatttttcagagtggtacaaaagggtgtacacattaa 9068599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 125 - 236
Target Start/End: Complemental strand, 9068521 - 9068411
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 224  Q
    |||||| ||||||| |||||| ||||| ||||||| ||| |||| || |||||||||  ||||||||||||||| || |||||||||||||||||||| |    
T  9068521 agttgcgtgaccactatttttccagaacttatttgttta-ctaagtggaaaaatagtaatcacgcgcattttagatgtgtgaccacatttttcagctttt 9068423  T
Q  225 aaatagtggtca 236  Q
    ||||||||||||    
T  9068422 aaatagtggtca 9068411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 225 - 342
Target Start/End: Complemental strand, 7706876 - 7706758
Alignment:
Q  225 aaatagtggtcacgcaactgataaaa-tgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 323  Q
    ||||||||||||||||||||| |||| |||||||||| | ||||||||||   |||||| |||||||| ||| |||||||||||| |||||| |||||||    
T  7706876 aaatagtggtcacgcaactgaaaaaaatgtggtcacacaaaccatatattatattaactaaaatttttcagaatggtacaaaaggatgtacacattaaag 7706777  T
Q  324 ttgactatcaatctttatt 342  Q
     ||  ||||||||||||||    
T  7706776 gtgtttatcaatctttatt 7706758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 125 - 189
Target Start/End: Original strand, 2430600 - 2430664
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgc 189  Q
    |||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||    
T  2430600 agttgcatgaccactattttttcagaatttatttggttaactaagtggaaaaatagtggtcacgc 2430664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 134 - 229
Target Start/End: Complemental strand, 2835069 - 2834974
Alignment:
Q  134 accaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaata 229  Q
    ||||| |||||| || ||||||||| |||| |||| || ||||||| |||||||||| ||||||||||| |||||| |||||||||||| ||||||    
T  2835069 accactatttttccataatttatttagttagctaagtggaaaaataatggtcacgcgtattttagttgcatgaccatatttttcagcttttaaata 2834974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 230 - 321
Target Start/End: Original strand, 7915696 - 7915787
Alignment:
Q  230 gtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    |||||||||||||| | ||| |||||||||| |||| ||||||||  ||||||||||||||| ||||||||| || |||||||||| |||||    
T  7915696 gtggtcacgcaactaaaaaattgtggtcacacagacgatatatttgattaactgaaatttttcagagtggtaaaagagggtgtacacattaa 7915787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 247 - 326
Target Start/End: Original strand, 23595261 - 23595340
Alignment:
Q  247 aaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttg 326  Q
    |||||||||||||| |||| |||||||| ||||| |||||||||| |||||  |||||||||||||||||||||| ||||    
T  23595261 aaaatgtggtcacacagactatatatttggttaattgaaattttttagagtaatacaaaagggtgtacatattaaggttg 23595340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 225 - 323
Target Start/End: Complemental strand, 30056138 - 30056039
Alignment:
Q  225 aaatagtggtcacgcaactgataaaa-tgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 323  Q
    ||||||||||||||||||  | |||| |||||||||| ||||||||||||| |||||||||||||||| ||||| ||||||| ||| ||| | |||||||    
T  30056138 aaatagtggtcacgcaacaaaaaaaaatgtggtcacatagaccatatatttggttaactgaaattttttagagttgtacaaaggggagtatacattaaag 30056039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 229 - 310
Target Start/End: Complemental strand, 10304707 - 10304627
Alignment:
Q  229 agtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggt 310  Q
    ||||||||||||| | | ||| |||||||||| ||||||||||||| |||||||||||||||| ||||||||||||| ||||    
T  10304707 agtggtcacgcaattaa-aaagtgtggtcacacagaccatatatttggttaactgaaattttttagagtggtacaaaggggt 10304627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 138726 - 138650
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggta 301  Q
    ||||||||||||||||||| | ||||||||| |||| ||||||||||||| ||||||| || ||||| |||||||||    
T  138726 aaatagtggtcacgcaactaagaaaatgtggccacacagaccatatatttggttaactaaatttttttagagtggta 138650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 146747 - 146671
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggta 301  Q
    ||||||||||||||||||| | ||||||||| |||| ||||||||||||| ||||||| || ||||| |||||||||    
T  146747 aaatagtggtcacgcaactaagaaaatgtggccacacagaccatatatttggttaactaaatttttttagagtggta 146671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 203 - 291
Target Start/End: Original strand, 11108147 - 11108235
Alignment:
Q  203 gtgaccacatttttcagcttctaaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaattttt 291  Q
    |||||||||||||||||||| |  | ||||||||||||||||| |||||||||||||| | | ||||||||| ||||| |||| |||||    
T  11108147 gtgaccacatttttcagcttattgacagtggtcacgcaactgaaaaaatgtggtcacacaaatcatatatttggttaattgaatttttt 11108235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 2430650 - 2430706
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaac 281  Q
    ||||||||||||||||||||| |||||||||||||| | ||||||||||| ||||||    
T  2430650 aaatagtggtcacgcaactgaaaaaatgtggtcacacaaaccatatatttggttaac 2430706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 247 - 304
Target Start/End: Complemental strand, 11108159 - 11108102
Alignment:
Q  247 aaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaa 304  Q
    |||||||||||||| ||||||||||||| ||||| |||||||||| ||||| ||||||    
T  11108159 aaaatgtggtcacacagaccatatatttggttaattgaaatttttcagagtagtacaa 11108102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 252 - 321
Target Start/End: Original strand, 18980401 - 18980470
Alignment:
Q  252 gtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    ||||||||| ||||||||||||||||||||| | |||||  |||||||||||||| ||||| || |||||    
T  18980401 gtggtcacatagaccatatatttagttaacttagattttgcagagtggtacaaaaaggtgtgcacattaa 18980470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 228 - 321
Target Start/End: Original strand, 24386312 - 24386405
Alignment:
Q  228 tagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    ||||| |||||||||  | || ||||||||||| ||||||||||||| ||||||| |||||||| || |||||| ||| || |||||| |||||    
T  24386312 tagtgatcacgcaacaaaaaatatgtggtcacacagaccatatatttggttaacttaaatttttcagcgtggtataaagggatgtacacattaa 24386405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 305
Target Start/End: Original strand, 2835060 - 2835140
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 305  Q
    |||||||||| || ||||| | |||||||||||||| |||   ||||||| ||||||| |||||||| |||||||||||||    
T  2835060 aaatagtggttacacaactaaaaaaatgtggtcacacagatggtatatttggttaacttaaatttttcagagtggtacaaa 2835140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 231 - 286
Target Start/End: Original strand, 2365649 - 2365704
Alignment:
Q  231 tggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaa 286  Q
    ||||||||||||||| |||||||||||||  | ||||||||||| |||||||||||    
T  2365649 tggtcacgcaactgaaaaaatgtggtcacgcataccatatatttggttaactgaaa 2365704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 238 - 321
Target Start/End: Complemental strand, 9068395 - 9068314
Alignment:
Q  238 gcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    |||||||| |||||||||||| | |||||||||| || ||||||||| ||||| ||||||||||  |||||||||| |||||||    
T  9068395 gcaactga-aaaatgtggtcatacagaccatatacttggttaactgatattttcgagagtggta-taaagggtgtatatattaa 9068314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 2430618 - 2430553
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaattttt 291  Q
    |||||||||||| |||||| | ||||  |||||||| ||| ||||||||||||||||||||||||||    
T  2430618 aaatagtggtcatgcaactaaaaaaaa-tggtcacacagatcatatatttagttaactgaaattttt 2430553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 230 - 291
Target Start/End: Original strand, 7706935 - 7706996
Alignment:
Q  230 gtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaattttt 291  Q
    |||||| ||||||| | ||||||| || ||| |||| |||||||||||||||||||||||||    
T  7706935 gtggtctcgcaactaaaaaaatgtagttacacagactatatatttagttaactgaaattttt 7706996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 343
Target Start/End: Complemental strand, 7915675 - 7915595
Alignment:
Q  264 accatatatttagttaactgaaatttttg-agagtggtacaaaagggtgtacatattaaagttgactatcaatctttattc 343  Q
    |||| ||||||  |||||||||||||||  |||||| |||||||||||||||| ||||||| || ||| | ||||||||||    
T  7915675 accacatatttgattaactgaaattttttcagagtgatacaaaagggtgtacacattaaaggtgtctaccgatctttattc 7915595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 2430498 - 2430568
Alignment:
Q  22 aagagcaatgataggtaggcacccttaatgatatgtacattcatttgtactattctg-aaaaatttcagttaac 94  Q
    ||||| || ||||||||| |||||||||||   ||||||||| ||||||| |||||| ||||||||||||||||    
T  2430498 aagagtaacgataggtagacacccttaatg---tgtacattcctttgtaccattctgaaaaaatttcagttaac 2430568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 11108067 - 11108133
Alignment:
Q  28 aatgataggtaggcacccttaatgatatgtacattcatttgtactattctgaaaaatttcagttaaccaa 97  Q
    |||| ||||||| ||| |||||||   |||||||||| |||||||| |||||||||||||| ||||||||    
T  11108067 aatggtaggtagacactcttaatg---tgtacattcacttgtactactctgaaaaatttcaattaaccaa 11108133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 276
Target Start/End: Complemental strand, 14524142 - 14524091
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttag 276  Q
    |||||||||||||||| || | | |||||||||||| |||||||||||||||    
T  14524142 aaatagtggtcacgcaccttaaacaatgtggtcacacagaccatatatttag 14524091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 22608461 - 22608558
Alignment:
Q  228 tagtggtcacgcaactgataaaatgtggtcacaaagaccatata---tttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaa 322  Q
    |||||||||||||||| | | ||| |||||||| ||| ||||||   ||| ||||||||||| |||| | | || |||||| ||||||||||||||||    
T  22608461 tagtggtcacgcaactaaaacaatatggtcacacagatcatataatatttggttaactgaaaattttcaaaatgatacaaaggggtgtacatattaaa 22608558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 2835181 - 2835108
Alignment:
Q  21 aaagagcaatgataggtaggcacccttaatgatatgtacattcatttgtactattctgaaaaatttcagttaaccaa 97  Q
    ||||||||||||||||||| || ||||||||   |||| ||  |||||||| | |||||||||||| ||||||||||    
T  2835181 aaagagcaatgataggtagacagccttaatg---tgtatatcaatttgtaccactctgaaaaatttaagttaaccaa 2835108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 305
Target Start/End: Original strand, 3222532 - 3222610
Alignment:
Q  227 atagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 305  Q
    |||||||||||| ||||   |||||||||||||| |||||||||||||  |||||| |  ||||| |||||| ||||||    
T  3222532 atagtggtcacgtaactagaaaaatgtggtcacacagaccatatatttgattaactaatcttttttagagtgatacaaa 3222610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 306
Target Start/End: Original strand, 20084729 - 20084783
Alignment:
Q  252 gtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaa 306  Q
    ||||||||| ||||||||||||||||||||| | |||||  ||| ||||||||||    
T  20084729 gtggtcacatagaccatatatttagttaacttagattttgcagaatggtacaaaa 20084783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 274
Target Start/End: Original strand, 15341435 - 15341484
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatattt 274  Q
    |||||||||||||||| || | |||||||| ||||| |||||||||||||    
T  15341435 aaatagtggtcacgcatcttaaaaaatgtgttcacacagaccatatattt 15341484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 274
Target Start/End: Original strand, 15341858 - 15341907
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatattt 274  Q
    ||||||||||||| || || | |||||||||||||| |||||||||||||    
T  15341858 aaatagtggtcacacaccttaaaaaatgtggtcacacagaccatatattt 15341907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 321
Target Start/End: Complemental strand, 20084689 - 20084596
Alignment:
Q  228 tagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    ||||| |||||||||  | || ||||||||||| | ||||||||||| ||||||| |||||||| ||  ||||| ||| || |||||| |||||    
T  20084689 tagtgatcacgcaacataaaatatgtggtcacacataccatatatttggttaacttaaatttttcagcatggtataaagggatgtacacattaa 20084596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 20084735 - 20084678
Alignment:
Q  132 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgc 189  Q
    ||||||| ||| |||  |||||||||||||||||||| ||||||| ||||| ||||||    
T  20084735 tgaccactattatttttgaatttatttggttaactaagtgaaaaagtagtgatcacgc 20084678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 321
Target Start/End: Complemental strand, 24386272 - 24386203
Alignment:
Q  252 gtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    ||||||||| |||||||||||||||||||||   ||||   ||||||||| |||| |||||||| |||||    
T  24386272 gtggtcacatagaccatatatttagttaacttggatttggcagagtggtataaaaaggtgtacacattaa 24386203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 125 - 189
Target Start/End: Complemental strand, 7706926 - 7706862
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgc 189  Q
    |||||| |||| || |||||| ||||| |||||||||||  ||| || |||||||||||||||||    
T  7706926 agttgcgtgacaactatttttccagaacttatttggttacttaagtggaaaaatagtggtcacgc 7706862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 24386283 - 24386323
Alignment:
Q  149 gaatttatttggttaactaaatgaaaaaatagtggtcacgc 189  Q
    |||||||||||||||||||| ||||||| ||||| ||||||    
T  24386283 gaatttatttggttaactaagtgaaaaagtagtgatcacgc 24386323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 1e-63; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 132 - 343
Target Start/End: Original strand, 38606828 - 38607039
Alignment:
Q  132 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 231  Q
    ||||||| || ||| |||||||||||||||||||||| || ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  38606828 tgaccactatgtttccagaatttatttggttaactaagtggaaaaatagtggtcacacgcattttcgttgcgtgaccacatttttcagcttctaaatagt 38606927  T
Q  232 ggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactat 331  Q
    ||| |||||||||| |||||||||||||  | ||||||||| ||||||||||||||||| |||||| ||||||| ||||||||| ||||| | || |||     
T  38606928 ggtaacgcaactgaaaaaatgtggtcacgcaaaccatatatgtagttaactgaaattttggagagttgtacaaaggggtgtacacattaaggatgtctac 38607027  T
Q  332 caatctttattc 343  Q
    |||| |||||||    
T  38607028 caatatttattc 38607039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 125 - 315
Target Start/End: Original strand, 5321955 - 5322145
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 224  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  5321955 agttgcgtgaccactatttttttagaatttatttggttaactaagtggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttct 5322054  T
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtaca 315  Q
    ||||| || |||||||| ||| |||||||| ||||| ||||||||||||| ||||| ||||||||||||||||| |||||| | |||||||    
T  5322055 aaataatgatcacgcaattgaaaaaatgtgatcacacagaccatatatttggttaattgaaatttttgagagtgatacaaaggagtgtaca 5322145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 125 - 343
Target Start/End: Original strand, 1251470 - 1251687
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 224  Q
    |||||| ||||||| |||||| || ||||||||||||||||||| ||  |||||||||||| ||| |||||||||| | ||| |||||||||||| || |    
T  1251470 agttgcgtgaccactatttttccataatttatttggttaactaagtgggaaaatagtggtcgcgcacattttagtt-catgatcacatttttcaggtttt 1251568  T
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagt 324  Q
    ||||||||||||||||||||| ||||||||||| || | | ||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| |     
T  1251569 aaatagtggtcacgcaactgaaaaaatgtggtctcacaaatcatatatttagttaactgaaattttcgagagtggtacaaatgggtgtacacattaagga 1251668  T
Q  325 tgactatcaatctttattc 343  Q
    || ||| ||||||||||||    
T  1251669 tgtctaccaatctttattc 1251687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 125 - 321
Target Start/End: Original strand, 31273555 - 31273751
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 224  Q
    |||||| ||| ||||||||||| ||||||||||||||||||| | ||||||||||| | ||||| ||||||||| ||| |||||| ||||||||||||||    
T  31273555 agttgcgtgatcaccattttttaagaatttatttggttaacttagtgaaaaaatagcgttcacgtgcattttagctgcatgaccatatttttcagcttct 31273654  T
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    |||||| |||||||||||||| || |||||| |||| |||||||||||||  |||| ||||||||| ||||||||||||||| ||| |||| |||||    
T  31273655 aaataggggtcacgcaactgaaaacatgtggccacatagaccatatatttgattaattgaaattttcgagagtggtacaaaaaggtatacacattaa 31273751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 142 - 315
Target Start/End: Complemental strand, 5573879 - 5573706
Alignment:
Q  142 tttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaa 241  Q
    ||||||| ||||||||||||||||||| || |||||||||||||||| ||||||||||| | ||||||||||||||| ||||||||||||||||||||||    
T  5573879 tttttcaaaatttatttggttaactaagtggaaaaatagtggtcacgtgcattttagttccatgaccacatttttcaacttctaaatagtggtcacgcaa 5573780  T
Q  242 ctgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtaca 315  Q
     ||| ||||||| |||||| | | ||||||||| |||||||||||| || |||| || ||||||||||||||||    
T  5573779 ttgaaaaaatgtagtcacatatatcatatatttggttaactgaaatgttcgagaatgatacaaaagggtgtaca 5573706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 153 - 321
Target Start/End: Original strand, 29367076 - 29367243
Alignment:
Q  153 ttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgataaaatg 252  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||| |||||     
T  29367076 ttatttggttaactaagtggaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttcaaaatagtggtcacacaattgaaaaaata 29367175  T
Q  253 tggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    |||| ||| ||||||||||||||||||| | |||||||  |||||| ||| || ||||||||| |||||    
T  29367176 tggttacatagaccatatatttagttaattaaaattttcaagagtgatac-aaggggtgtacacattaa 29367243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 125 - 284
Target Start/End: Original strand, 15714688 - 15714847
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 224  Q
    |||||| ||||||| ||||||||  ||||||||||||||||||| || ||||||||||||||||  |||||||||| |||||||| |||||||||||| |    
T  15714688 agttgcgtgaccactattttttcgaaatttatttggttaactaagtggaaaaatagtggtcacggacattttagttacgtgaccatatttttcagctttt 15714787  T
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactga 284  Q
    ||||||| ||||| || |||| |||||||||| ||| |||||||||||||||||||||||    
T  15714788 aaatagtagtcacacagctgaaaaaatgtggttacacagaccatatatttagttaactga 15714847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 142 - 305
Target Start/End: Original strand, 26493347 - 26493507
Alignment:
Q  142 tttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaa 241  Q
    |||||||||||||||||| ||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| || || |||    
T  26493347 tttttcagaatttatttgattaactaaatggaaaaatagttgtcacgcgcattt-agttgcgtgaccacatttttcagcttctaaatagtagttacacaa 26493445  T
Q  242 ctgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 305  Q
    |||| |||||||| ||||| | |  |||||||| ||||| |||||||||| | |||||||||||    
T  26493446 ctgaaaaaatgtgatcacacaaa--atatatttggttaattgaaatttttaaaagtggtacaaa 26493507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 141 - 343
Target Start/End: Complemental strand, 31596894 - 31596693
Alignment:
Q  141 ttttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgca 240  Q
    ||||| || ||||||||||||||| ||| || |||||||||| | || ||||||| |||||  ||||||||||||||| ||||||||||||||| |||||    
T  31596894 tttttccataatttatttggttaattaagtggaaaaatagtgattacacgcattt-agttgtctgaccacatttttcatcttctaaatagtggtaacgca 31596796  T
Q  241 actgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatcaatcttta 340  Q
    ||||| |||||||||||||| | |||||||||||  ||||||| ||||||| | |||||||||||  ||||||||||||||   || ||| |||||||||    
T  31596795 actgaaaaaatgtggtcacacataccatatatttgattaactgtaatttttcaaagtggtacaaagaggtgtacatattaagagtgtctaccaatcttta 31596696  T
Q  341 ttc 343  Q
    |||    
T  31596695 ttc 31596693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 132 - 273
Target Start/End: Original strand, 1240901 - 1241041
Alignment:
Q  132 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 231  Q
    ||||||| |||||| || ||||||||||||||||||| ||  |||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||    
T  1240901 tgaccactatttttccataatttatttggttaactaagtgggaaaatagtggtcacgcacattttagtt-catgaccacatttttcagcttctaaatagt 1240999  T
Q  232 ggtcacgcaactgataaaatgtggtcacaaagaccatatatt 273  Q
    |||||| ||||||| ||||| ||||| || | ||||||||||    
T  1241000 ggtcacacaactgaaaaaatatggtctcacacaccatatatt 1241041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 195 - 343
Target Start/End: Complemental strand, 33286263 - 33286115
Alignment:
Q  195 ttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgag 294  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||  ||||||||||||| ||||| | || ||||| ||    
T  33286263 ttagttgcgtgaccacatttttcagcttctaaaaagtggtcacgcaattgaaaaaatgtggtcacgcagaccatatatttggttaattaaatttttttag 33286164  T
Q  295 agtggtacaaaagggtgtacatattaaagttgactatcaatctttattc 343  Q
    || |||||||| ||||||||| ||||| | || | | ||||||||||||    
T  33286163 aggggtacaaatgggtgtacacattaagggtgtccaccaatctttattc 33286115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 225 - 332
Target Start/End: Complemental strand, 15714706 - 15714599
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagt 324  Q
    ||||||||||||||||||| | |||||||||||||| | | ||||||||||| |||||||||||||| ||||||||||||||  |||||||||||||||     
T  15714706 aaatagtggtcacgcaactaacaaaatgtggtcacataaatcatatatttagctaactgaaatttttcagagtggtacaaaaatgtgtacatattaaagg 15714607  T
Q  325 tgactatc 332  Q
    || |||||    
T  15714606 tgtctatc 15714599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 151 - 344
Target Start/End: Complemental strand, 15233318 - 15233115
Alignment:
Q  151 atttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct-----------aaatagtggtcacgc 239  Q
    |||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||| ||||||| ||| |           ||||||||||||||     
T  15233318 atttatttggttaattaagtgaaaaaatagtggtcatgcgcattttagttgcgtgaccacgtttttcaacttttaaatgctggaaaaatagtggtcacgt 15233219  T
Q  240 aactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatcaatcttt 339  Q
    |||||| |||||||| || || |||||||||||||  ||||||||||||||| ||| |||||| ||  | |||||| ||||||| |  | ||| ||||||    
T  15233218 aactga-aaaatgtgatcgcagagaccatatatttgattaactgaaatttttcagattggtacgaagagatgtacacattaaaggtatccatccatcttt 15233120  T
Q  340 attca 344  Q
    |||||    
T  15233119 attca 15233115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 225 - 323
Target Start/End: Original strand, 5573877 - 5573976
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagacc-atatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 323  Q
    ||||||||||||||||| | | |||||||||||||||||||  ||||||||||||||||||||| ||| ||||||||||||||| ||||||| |||||||    
T  5573877 aaatagtggtcacgcaattaaaaaaatgtggtcacaaagacatatatatttagttaactgaaatcttttagagtggtacaaaagagtgtacacattaaag 5573976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 227 - 310
Target Start/End: Complemental strand, 38606837 - 38606754
Alignment:
Q  227 atagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggt 310  Q
    |||||||||||||| || | ||||| |||||||| | |||||||||||||||||||||||||||| ||||||||||||| ||||    
T  38606837 atagtggtcacgcagctaaaaaaatatggtcacacataccatatatttagttaactgaaatttttcagagtggtacaaaggggt 38606754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 166 - 345
Target Start/End: Complemental strand, 32959635 - 32959456
Alignment:
Q  166 taaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgataaaatgtggtcacaaagac 265  Q
    |||||| ||||||||||||||| | ||||||||||| ||||||| |||||| ||||||| ||| ||||||||| || ||| |||||||| ||||| | |     
T  32959635 taaatggaaaaatagtggtcacacacattttagttgtgtgaccatattttttagcttcttaatggtggtcacgtaattgaaaaaatgtgatcacacaaat 32959536  T
Q  266 catatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatcaatctttattcaa 345  Q
    ||| ||||| |||||  |||| |||  | | | |||||||  |||||| | || |||| || ||| ||||||||||||||    
T  32959535 catgtatttggttaatcgaaaatttccataattgtacaaagtggtgtagacataaaaggtgtctaccaatctttattcaa 32959456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 342
Target Start/End: Original strand, 24576180 - 24576270
Alignment:
Q  252 gtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatcaatctttatt 342  Q
    ||||||||| ||||||||||||| ||||| ||||||||| |||||||||||||| ||||||||| ||||  | || ||| |||||||||||    
T  24576180 gtggtcacacagaccatatatttggttaattgaaattttcgagagtggtacaaaggggtgtacacattacgggtgtctaccaatctttatt 24576270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 132 - 257
Target Start/End: Original strand, 24575907 - 24576023
Alignment:
Q  132 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 231  Q
    ||||||| |||||| |||||||||||||||||| ||| ||||||||||||||||||  ||         | |||  ||||||||||||||||||||||||    
T  24575907 tgaccactatttttccagaatttatttggttaaataagtgaaaaaatagtggtcacttgc---------gtgtggtcacatttttcagcttctaaatagt 24575997  T
Q  232 ggtcacgcaactgataaaatgtggtc 257  Q
    ||| ||| |||| | |||||||||||    
T  24575998 ggtaacgaaactcaaaaaatgtggtc 24576023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 6809895 - 6809804
Alignment:
Q  141 ttttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtg 232  Q
    |||| ||| ||||||||||||||| |||||| |||||||||||||||  | |||||||| | || ||||||||||| | ||| |||||||||    
T  6809895 ttttctcataatttatttggttaattaaatggaaaaatagtggtcacatgtattttagtcgagtaaccacattttttatcttttaaatagtg 6809804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 323
Target Start/End: Complemental strand, 28700133 - 28700058
Alignment:
Q  247 aaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 323  Q
    ||||| |||||||| | |||||||||||||||||||||||||||| ||| || ||||||| | |||||| |||||||    
T  28700133 aaaatatggtcacata-accatatatttagttaactgaaattttttagaatgatacaaaatgatgtacacattaaag 28700058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 5321973 - 5321907
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaattttt 291  Q
    ||||||||||||||||||| | |||||||||||||| |  ||||||||||| |||||| ||| ||||    
T  5321973 aaatagtggtcacgcaactaaaaaaatgtggtcacacatgccatatatttaattaactcaaaatttt 5321907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 15233314 - 15233395
Alignment:
Q  224 taaatagtggtcacgcaact-gataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 305  Q
    ||||||||||||| ||| || |||||| |||||||||| | || ||||||||| |||||| |||||||| |||||||||||||    
T  15233314 taaatagtggtcaagcacctagataaa-tgtggtcacacaaactatatatttaattaactaaaatttttcagagtggtacaaa 15233395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 225 - 274
Target Start/End: Original strand, 40502175 - 40502224
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatattt 274  Q
    |||||||||||||||| || | |||||||||||||| |||||||||||||    
T  40502175 aaatagtggtcacgcaccttaaaaaatgtggtcacacagaccatatattt 40502224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 276
Target Start/End: Original strand, 24919659 - 24919710
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttag 276  Q
    |||||||||||||||| || | |||||||||||||| ||| |||||||||||    
T  24919659 aaatagtggtcacgcaccttaaaaaatgtggtcacagagaacatatatttag 24919710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 279
Target Start/End: Original strand, 24919871 - 24919925
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagtta 279  Q
    |||||||||||||||| || | |||||||||||||| ||| ||||||||| ||||    
T  24919871 aaatagtggtcacgcaccttaaaaaatgtggtcacacagaacatatatttggtta 24919925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 321
Target Start/End: Complemental strand, 26493342 - 26493252
Alignment:
Q  231 tggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    ||||| ||||||| | | |||||||||||| |||||||||||||  |||| | |||||||| | ||||||| ||||  ||||||| |||||    
T  26493342 tggtcgcgcaactaaaacaatgtggtcacatagaccatatatttgattaagtaaaattttttaaagtggtataaaaaagtgtacacattaa 26493252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 229
Target Start/End: Original strand, 24537982 - 24538078
Alignment:
Q  132 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaata 229  Q
    ||||||| | |||| || |||||||||||||||| | ||| |||||||||||| || ||| ||  |||| | |||||| |||||| ||||||||||||    
T  24537982 tgaccactaattttccaaaatttatttggttaaccatatggaaaaatagtggtaacacgcgttgcagttacatgaccatattttt-agcttctaaata 24538078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 274
Target Start/End: Original strand, 40502387 - 40502436
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatattt 274  Q
    ||||||||||||| || || | |||||||||||||| |||||||||||||    
T  40502387 aaatagtggtcacacaccttaaaaaatgtggtcacacagaccatatattt 40502436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 297
Target Start/End: Complemental strand, 26914702 - 26914631
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagt 297  Q
    |||||||||||||| |||| | |||||||| ||||| | | |||||||||||||| || |||||||| |||||    
T  26914702 aaatagtggtcacgtaactaa-aaaatgtgatcacacaaatcatatatttagttagcttaaatttttcagagt 26914631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 1e-63; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 125 - 344
Target Start/End: Complemental strand, 31303569 - 31303350
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 224  Q
    |||||| ||||||| || ||| |||||||||||||||||||||| || ||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  31303569 agttgcgtgaccactatgtttccagaatttatttggttaactaagtggaaaaatagtggtcacgcacattttagttgcatgaccacatttttcagcttct 31303470  T
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagt 324  Q
    ||||||||||||||||| ||| |||||||||||||  ||||||| ||||| ||| |||||||||||| |||||| |||||| || |||||| ||||| |     
T  31303469 aaatagtggtcacgcaattgaaaaaatgtggtcacgcagaccatgtatttggttgactgaaatttttcagagtgatacaaatggatgtacacattaaggg 31303370  T
Q  325 tgactatcaatctttattca 344  Q
    || ||| |||||||||||||    
T  31303369 tgtctaccaatctttattca 31303350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 141 - 297
Target Start/End: Complemental strand, 20556866 - 20556710
Alignment:
Q  141 ttttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgca 240  Q
    |||||||||||||||||||||||||||| || ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  20556866 ttttttcagaatttatttggttaactaagtggaaaaatattggtcacgcgtattttagttgcgtgaccacatttttcagcttctaaatagtggtcacaca 20556767  T
Q  241 actgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagt 297  Q
    ||||| ||||| ||||||||  |||||||||||| ||||||||||||||| ||||||    
T  20556766 actgaaaaaatatggtcacaccgaccatatatttggttaactgaaattttcgagagt 20556710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 125 - 343
Target Start/End: Complemental strand, 18312942 - 18312725
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 224  Q
    |||||| ||||||| ||||||  |||||||||| |||||||||| || |||||||||||||||  ||||||||||||||||| |||||||| ||||||||    
T  18312942 agttgcgtgaccactatttttcaagaatttattaggttaactaagtggaaaaatagtggtcacatgcattttagttgcgtgagcacatttt-cagcttct 18312844  T
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagt 324  Q
    ||||||| || |||||||||| || ||||||||||| |||||||||||||  |||| ||||||||| |||||||||||||| |||| ||||  |||| |     
T  18312843 aaatagtagtgacgcaactgaaaatatgtggtcacagagaccatatatttgattaattgaaattttcgagagtggtacaaaggggtatacacgttaaggg 18312744  T
Q  325 tgactatcaatctttattc 343  Q
    || ||| ||||||||||||    
T  18312743 tgtctaccaatctttattc 18312725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 125 - 345
Target Start/End: Complemental strand, 21548568 - 21548349
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 224  Q
    |||||| ||||||| |||||| |||||||||||||||||||||| || ||||| |||||| |||||||||  |||||||||||||||||||||||||| |    
T  21548568 agttgcgtgaccactatttttccagaatttatttggttaactaagtggaaaaacagtggttacgcgcattcgagttgcgtgaccacatttttcagctttt 21548469  T
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagt 324  Q
    ||||| ||||||| ||||||| ||||| |||||||| | ||||||| |||  ||||||||||||||  |||||||||||||   ||||| |||||||||     
T  21548468 aaatattggtcacacaactgaaaaaatatggtcacacataccatat-tttgattaactgaaattttcaagagtggtacaaagaagtgtatatattaaagg 21548370  T
Q  325 tgactatcaatctttattcaa 345  Q
    || ||| | ||||||||||||    
T  21548369 tgtctaccgatctttattcaa 21548349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 125 - 323
Target Start/End: Complemental strand, 4290942 - 4290745
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 224  Q
    |||||| ||||||| | ||||||||||||||||||||||||||| || ||||||||||||||||| || || |||||||||||||||||||||| |||||    
T  4290942 agttgcgtgaccactagtttttcagaatttatttggttaactaagtggaaaaatagtggtcacgcacactt-agttgcgtgaccacatttttcaacttct 4290844  T
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 323  Q
    ||||||||||||| ||||||| |||||||||||| | | ||||||||| ||||||| | || || || |||||||||||||  ||||| || |||||||    
T  4290843 aaatagtggtcactcaactgaaaaaatgtggtcagataaaccatatatctagttaattaaatttgtttagagtggtacaaacaggtgtgcacattaaag 4290745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 125 - 274
Target Start/End: Complemental strand, 21589739 - 21589590
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 224  Q
    |||||||||||||| |||||| ||||| ||||||| |||| ||| || ||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  21589739 agttgcatgaccactatttttccagaacttatttgattaattaagtggaaaaatagtggtcacacgcattttagttgcatgaccacatttttcagcttct 21589640  T
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatattt 274  Q
    |||||||| |||| ||||||| ||||| |||||||| |||| ||||||||    
T  21589639 aaatagtgatcacacaactgaaaaaatatggtcacatagacaatatattt 21589590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 132 - 303
Target Start/End: Original strand, 15958313 - 15958485
Alignment:
Q  132 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaata----gtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaa 227  Q
    ||||||| ||||||||||||||||||||||||| ||| | |||||| |    ||| |||||| ||||| | |||||||||||||||||||||||||||||    
T  15958313 tgaccactattttttcagaatttatttggttaaataagtaaaaaaaaaaattgtgatcacgcacatttaa-ttgcgtgaccacatttttcagcttctaaa 15958411  T
Q  228 tagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtaca 303  Q
    ||||| ||| |||||| | |||||||||||||| |||||||||||||||||||||||||||||  |||||||||||    
T  15958412 tagtg-tcatgcaactta-aaaatgtggtcacacagaccatatatttagttaactgaaattttacagagtggtaca 15958485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 132 - 323
Target Start/End: Original strand, 5083792 - 5083982
Alignment:
Q  132 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 231  Q
    ||||||| ||||||  ||||||||||| |||||| || |  ||||||||||||||| ||||||| ||||||||||||| |||||||| ||||||||||||    
T  5083792 tgaccactatttttctagaatttatttcgttaacaaagttgaaaaatagtggtcacccgcattt-agttgcgtgaccatatttttcaacttctaaatagt 5083890  T
Q  232 ggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 323  Q
    |||||||||| ||| |||||||||||||| | |||||||||||  | || ||||||||| |||| |  |||||| ||||||| | |||||||    
T  5083891 ggtcacgcaattgaaaaaatgtggtcacacataccatatatttgatgaattgaaattttcgagaataatacaaaggggtgtatacattaaag 5083982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 127 - 290
Target Start/End: Original strand, 22740654 - 22740817
Alignment:
Q  127 ttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaa 226  Q
    |||| |||| || ||||||||||||||||||||||||||||| || ||||||| || ||||||  |||||||||||||||||| |||||||||||| |||    
T  22740654 ttgcgtgactactattttttcagaatttatttggttaactaagtggaaaaataatgatcacgcatattttagttgcgtgaccatatttttcagcttttaa 22740753  T
Q  227 atagtggtcacgcaactg-ataaaatgtggtcacaaagaccatatatttagttaactgaaatttt 290  Q
    ||| ||||||| |||||| | |||||||||| ||| | || |||||||||||||| |||||||||    
T  22740754 ata-tggtcacacaactgaaaaaaatgtggttacacaaactatatatttagttaattgaaatttt 22740817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 28804990 - 28805094
Alignment:
Q  132 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 231  Q
    ||||||| || ||| || ||||||||||||||||||| || ||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||    
T  28804990 tgaccactatatttccataatttatttggttaactaagtggaaaaatagtggtc-cgcgcattttggttgtgtgaccacatttttcagcttctaaatagt 28805088  T
Q  232 ggtcac 237  Q
    | ||||    
T  28805089 gatcac 28805094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 224 - 323
Target Start/End: Original strand, 32964848 - 32964947
Alignment:
Q  224 taaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 323  Q
    |||||||||||||||||||| | || ||||||||||| ||||||||||| ||||||||| |||||||| |||||| |||||||||||||| | |||||||    
T  32964848 taaatagtggtcacgcaactaaaaatatgtggtcacacagaccatatatatagttaacttaaattttttagagtgatacaaaagggtgtatacattaaag 32964947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 151 - 343
Target Start/End: Complemental strand, 32964852 - 32964651
Alignment:
Q  151 atttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct----------aaatagtggtcacgca 240  Q
    ||||||| |||||| ||| || |||||||||||||||| ||||||||||| | |||||| ||||||||||||||          ||||||||||||| ||    
T  32964852 atttattaggttaattaagtggaaaaatagtggtcacgtgcattttagttacatgaccatatttttcagcttctaaatgctggaaaatagtggtcacaca 32964753  T
Q  241 actgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatcaatcttta 340  Q
    | ||| ||||| |||||||| | ||||||||||||||||||| ||||| || ||||||||  ||| |  |||||| ||||| | || ||| |||||||||    
T  32964752 attga-aaaatatggtcacacataccatatatttagttaacttaaattctttagagtggtgtaaatgaatgtacacattaaggatgtctaccaatcttta 32964654  T
Q  341 ttc 343  Q
    |||    
T  32964653 ttc 32964651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 247 - 321
Target Start/End: Complemental strand, 28804976 - 28804902
Alignment:
Q  247 aaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    |||||||||||||| ||||||||||||| |||||||||||||||  ||| |||||||||||||||||||||||||    
T  28804976 aaaatgtggtcacatagaccatatatttggttaactgaaattttctagaatggtacaaaagggtgtacatattaa 28804902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 225 - 343
Target Start/End: Original strand, 28805116 - 28805234
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagt 324  Q
    |||| ||| |||||||||||| |||||||||||||| | ||||||||||| ||||||| |||||||| |||||| |||||| |||| |||| ||||| |     
T  28805116 aaatcgtgatcacgcaactgaaaaaatgtggtcacacataccatatatttggttaacttaaatttttcagagtgatacaaaggggtatacacattaaggg 28805215  T
Q  325 tgactatcaatctttattc 343  Q
    || ||| ||||||||||||    
T  28805216 tgtctaccaatctttattc 28805234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 225 - 321
Target Start/End: Original strand, 21589721 - 21589817
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    |||||||||||| |||||| | |||||||||||||| ||||||||||||| | |||||||||||||| ||||||||| ||| || |||||| |||||    
T  21589721 aaatagtggtcatgcaactaaaaaaatgtggtcacacagaccatatatttggataactgaaattttttagagtggtataaacggatgtacacattaa 21589817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 151 - 228
Target Start/End: Original strand, 46943761 - 46943839
Alignment:
Q  151 atttatttggttaactaaatgaaaa--aatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaat 228  Q
    |||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  46943761 atttatttggttaactaagtgaaaaaaaatagtggtcacgcgcattttagttgcgtgatcaca-ttttcagcttctaaat 46943839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 227 - 336
Target Start/End: Original strand, 31303553 - 31303661
Alignment:
Q  227 atagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttg 326  Q
    ||||||||||||||||| | |||||||||||||| | ||||||||||| ||||||||||||||||  |||||||| |||||| |||| | ||||||| ||    
T  31303553 atagtggtcacgcaactaa-aaaatgtggtcacacataccatatattttgttaactgaaatttttttgagtggtataaaaggatgtagacattaaaggtg 31303651  T
Q  327 actatcaatc 336  Q
     ||| |||||    
T  31303652 tctaccaatc 31303661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 225 - 305
Target Start/End: Original strand, 22033158 - 22033238
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 305  Q
    ||||||||||||||||||| | ||||| |||||||| ||||||||||||| ||||||| |||||||| ||| |||||||||    
T  22033158 aaatagtggtcacgcaactcaaaaaatatggtcacacagaccatatatttggttaactaaaatttttcagaatggtacaaa 22033238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 225 - 304
Target Start/End: Original strand, 21548550 - 21548629
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaa 304  Q
    ||||||||||||||||||| |  |||| || ||||| |||||||||||||||||||||||||||||| ||| ||||||||    
T  21548550 aaatagtggtcacgcaactaaacaaatatgatcacacagaccatatatttagttaactgaaattttttagaatggtacaa 21548629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 5083803 - 5083738
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaattttt 291  Q
    |||||||||||||| |||| | ||||||||||||||||||||||||||||  |||||||||||||||    
T  5083803 aaatagtggtcacgtaactaa-aaaatgtggtcacaaagaccatatatttgattaactgaaattttt 5083738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 5174975 - 5174910
Alignment:
Q  132 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcatttta 197  Q
    ||||||| | |||||||||||||||||| |||||||| || ||||||||||||||||| |||||||    
T  5174975 tgaccactaatttttcagaatttatttgattaactaagtgtaaaaatagtggtcacgcacatttta 5174910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 225 - 305
Target Start/End: Original strand, 18312924 - 18313004
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 305  Q
    ||||||||||||||||||| | ||||| | | |||| | ||||||||||| |||| ||||||||||| |||||||||||||    
T  18312924 aaatagtggtcacgcaactaaaaaaatttagccacacaaaccatatatttggttagctgaaatttttcagagtggtacaaa 18313004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 225 - 321
Target Start/End: Original strand, 20556867 - 20556963
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    ||||||||||||| ||||  | |||||||||||| | |||| |||||||||||||||||||| |||| | |||| |||||| | |||| ||||||||    
T  20556867 aaatagtggtcactcaaccaaaaaaatgtggtcaaacagactatatatttagttaactgaaaattttcaaagtgatacaaaggagtgtgcatattaa 20556963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 228
Target Start/End: Original strand, 27523496 - 27523583
Alignment:
Q  141 ttttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaat 228  Q
    |||||||||||||||||||||||| ||| || ||||||||| |||| || ||||||| |||  ||||||  |||||||| ||||||||    
T  27523496 ttttttcagaatttatttggttaattaagtggaaaaatagtagtcaagcacattttaattgtatgaccatgtttttcagtttctaaat 27523583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 2887188 - 2887230
Alignment:
Q  193 ttttagttgcgtgaccacatttttcagcttctaaatagtggtc 235  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  2887188 ttttagttgcgtaaccacatttttcagcttctaaatagtggtc 2887230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 15958324 - 15958258
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaattttt 291  Q
    ||||||||||||| ||||| | ||||||||||||||  |||||||||||| ||||||| ||||||||    
T  15958324 aaatagtggtcacacaactaaaaaaatgtggtcacactgaccatatatttggttaacttaaattttt 15958258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 305
Target Start/End: Complemental strand, 22033054 - 22032996
Alignment:
Q  247 aaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 305  Q
    |||||||||||||| | ||||||||||| ||||||| |||||||  |||||||||||||    
T  22033054 aaaatgtggtcacacataccatatatttggttaacttaaattttaaagagtggtacaaa 22032996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 228 - 305
Target Start/End: Original strand, 4290927 - 4291004
Alignment:
Q  228 tagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 305  Q
    |||||||||||||||| | |||| ||||||| | ||| ||| ||||| |||||||||||||||| | ||| |||||||    
T  4290927 tagtggtcacgcaactaaaaaaacgtggtcatacagatcatttatttggttaactgaaatttttcaaagtagtacaaa 4291004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 247 - 321
Target Start/End: Complemental strand, 22740150 - 22740076
Alignment:
Q  247 aaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    |||||||||||||| |||||||||||||  |||||| |||| ||| |||||| |||| |  |||||||| |||||    
T  22740150 aaaatgtggtcacacagaccatatatttgattaacttaaatatttcagagtgatacatagaggtgtacacattaa 22740076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 28804882 - 28804950
Alignment:
Q  26 gcaatgataggtaggcacccttaatgatatgtacattcatttgtactattctgaaaaatttcagttaaccaa 97  Q
    |||||||||||||| ||||||||||   |||||||  | ||||||| |||||  ||||||||||||||||||    
T  28804882 gcaatgataggtagacacccttaat---atgtacacccttttgtaccattctagaaaatttcagttaaccaa 28804950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 22033095 - 22033151
Alignment:
Q  172 aaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaat 228  Q
    |||||||||||||| ||| ||||||||||| ||| ||  ||||||||| ||||||||    
T  22033095 aaaaaatagtggtcccgcacattttagttgtgtgcccgtatttttcagtttctaaat 22033151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 118; Significance: 5e-60; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 125 - 342
Target Start/End: Complemental strand, 13312714 - 13312498
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 224  Q
    |||||| ||||||| |||||| || ||||||||||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  13312714 agttgcgtgaccactatttttccataatttatttggttaactaagtggaaaaatagttgccacgcgcattttagttgcgtgaccacatttttcagcttct 13312615  T
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagt 324  Q
    |||||| |||||| ||||||| |||||||| ||||| ||||||||||||| ||||| ||||||||| || | | ||||||||||||||||| |||||||     
T  13312614 aaatagcggtcacccaactga-aaaatgtgttcacatagaccatatatttggttaattgaaattttcgaaaatagtacaaaagggtgtacacattaaagg 13312516  T
Q  325 tgactatcaatctttatt 342  Q
    |  ||| |||||||||||    
T  13312515 tatctaccaatctttatt 13312498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 125 - 255
Target Start/End: Complemental strand, 35922848 - 35922718
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 224  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  35922848 agttgcatgaccactattttttcagaatttatttggttaactaaatggaaaaatagtggtcatacgcattttagttgcgtgaccacatttttcagcttct 35922749  T
Q  225 aaatagtggtcacgcaactgataaaatgtgg 255  Q
    ||||||||||||||||||||| |||||||||    
T  35922748 aaatagtggtcacgcaactgaaaaaatgtgg 35922718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 125 - 321
Target Start/End: Complemental strand, 22169573 - 22169377
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 224  Q
    |||||| ||||||  ||||||||| ||||||||||||||||||  |  |||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  22169573 agttgcgtgaccattattttttcaaaatttatttggttaactacgttgaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcaacttat 22169474  T
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    ||||||||||||||||||||| |||||||| ||||| |  ||||||||||||||||||||||||||  | | || ||||| |||||||||| |||||    
T  22169473 aaatagtggtcacgcaactgaaaaaatgtgatcacatattccatatatttagttaactgaaattttcaaaaatgatacaatagggtgtacacattaa 22169377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 148 - 280
Target Start/End: Original strand, 38521984 - 38522115
Alignment:
Q  148 agaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgata 247  Q
    ||||||||||| ||||||||| || ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||| ||| |    
T  38521984 agaatttatttagttaactaagtgtaaaaatagtggtcacgcgcatttta-tcgcgtgaccacatttttcagcttctaaatagtggtcatgcaattgaaa 38522082  T
Q  248 aaatgtggtcacaaagaccatatatttagttaa 280  Q
    ||||||||||||| ||||||||||||| |||||    
T  38522083 aaatgtggtcacatagaccatatatttggttaa 38522115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 140 - 290
Target Start/End: Original strand, 43461709 - 43461858
Alignment:
Q  140 attttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgc 239  Q
    ||||||||||||||||||||||| ||||| || |||||||||||| ||| | |||||||||||||||||  |||||||| |||||||||||||||||| |    
T  43461709 attttttcagaatttatttggtttactaagtggaaaaatagtggttacgtgaattttagttgcgtgaccgtatttttcaacttctaaatagtggtcacac 43461808  T
Q  240 aactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttt 290  Q
    |||||| ||||| ||||| ||||||||||||||||  ||||||||||||||    
T  43461809 aactgaaaaaatatggtc-caaagaccatatatttgattaactgaaatttt 43461858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 128 - 301
Target Start/End: Original strand, 33958976 - 33959148
Alignment:
Q  128 tgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaa 227  Q
    ||||||||||| |||||| ||||||||||||||| |||||| || |||||||||||| || || |||||||||||||||||| ||||||||| |||||||    
T  33958976 tgcatgaccacaatttttccagaatttatttggtcaactaagtggaaaaatagtggttactcggattttagttgcgtgaccatatttttcagtttctaaa 33959075  T
Q  228 tagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggta 301  Q
    ||||||||||||| |||| |||||||  ||||| |||  |||||||| |||||||||| |||| |||| |||||    
T  33959076 tagtggtcacgcagctgaaaaaatgtaatcacataga-tatatattttgttaactgaagttttcgagaatggta 33959148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 140 - 315
Target Start/End: Original strand, 19621481 - 19621655
Alignment:
Q  140 attttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct----aaatagtggtc 235  Q
    |||||| |||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||| ||||     ||||    |||||||||||    
T  19621481 atttttccagaatttatttggttaactaagtggaaaaatagtggtcacgcacattttagttgcgtgaccacgtttt-----ttctggaaaaatagtggtc 19621575  T
Q  236 acgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtaca 315  Q
    |||||| ||  |||||||||||||| | ||||||||||| |||||||||||||||| ||| ||||||||| | |||||||    
T  19621576 acgcaaatggaaaaatgtggtcacacataccatatatttggttaactgaaatttttcagaatggtacaaaggagtgtaca 19621655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 147 - 343
Target Start/End: Complemental strand, 31189671 - 31189474
Alignment:
Q  147 cagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactg-- 244  Q
    ||||||||||||| ||||| || || |||| ||||||||||   |||||||||||||||| ||||||||||||||||||||||||  ||| |||| ||      
T  31189671 cagaatttatttgattaaccaagtggaaaa-tagtggtcacaaacattttagttgcgtgatcacatttttcagcttctaaatagtaatcatgcaattgga 31189573  T
Q  245 ataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatcaatctttattc 343  Q
      |||||||||||||| | || |||||||| ||||||||||||||| ||||||||||||||| | |||||||||||||| || ||  ||||||||||||    
T  31189572 caaaaatgtggtcacacatactatatatttggttaactgaaattttcgagagtggtacaaaatgttgtacatattaaaggtgtctgccaatctttattc 31189474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 125 - 260
Target Start/End: Complemental strand, 42034872 - 42034739
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 224  Q
    |||||| ||||||| | |||| || ||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  42034872 agttgcgtgaccactagttttccaaaatttatttggttaactaagtggaaaaatagtggtcacgtgcattttagttgcgtgaccacatttttcagcttct 42034773  T
Q  225 aaatagtggtcacgcaactgataaaatgtggtcaca 260  Q
     |||||  ||||||||||||| ||||||||||||||    
T  42034772 -aataggagtcacgcaactga-aaaatgtggtcaca 42034739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 193 - 343
Target Start/End: Original strand, 36169394 - 36169543
Alignment:
Q  193 ttttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttg 292  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| | |||||||||||  | | ||||||||||||    
T  36169394 ttttagttgcgtgaccatatttttcagcttctaaatagtggtcacgcaactgaaagaatgtggtcacacataccatatatttgatcagctgaaatttttg 36169493  T
Q  293 agagtggtacaaaagggtgtacatattaaagttgactatcaatctttattc 343  Q
    ||||||||  |||| | |||| | ||||||| || ||| ||||||||||||    
T  36169494 agagtggtgtaaaa-gatgtatacattaaagatgtctagcaatctttattc 36169543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 154 - 321
Target Start/End: Original strand, 43262708 - 43262889
Alignment:
Q  154 tatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacattt---ttcagcttct-----------aaatagtggtcacgc 239  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||   |||||||| |           ||||||| |||||      
T  43262708 tatttggttaactaagtggaaaaatagtggtcacgcgcattttagttgtgtgaccacatttttcttcagcttttaaatgttggaaaaatagtagtcacat 43262807  T
Q  240 aactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    |||| |  ||||||||||||| ||||||||||||| |||||||||||||||| | ||| ||||||| ||||||||| |||||    
T  43262808 aactaaacaaatgtggtcacacagaccatatatttggttaactgaaatttttcaaagtagtacaaaggggtgtacacattaa 43262889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 225 - 323
Target Start/End: Original strand, 15221662 - 15221760
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 323  Q
    ||||||||||||| ||| | | |||||||||||||| |||||||||||||||||||||||||||||| ||| || |||||| | ||||||| |||||||    
T  15221662 aaatagtggtcacacaattaaaaaaatgtggtcacacagaccatatatttagttaactgaaatttttcagaatgatacaaaggagtgtacacattaaag 15221760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 225 - 307
Target Start/End: Original strand, 13312696 - 13312778
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaag 307  Q
    ||||||||||||||||||| | |||||||||||||| | | ||||||| | |||||||||||||||| |||||||||||||||    
T  13312696 aaatagtggtcacgcaactaaaaaaatgtggtcacacaaatcatatatatggttaactgaaatttttcagagtggtacaaaag 13312778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 151 - 228
Target Start/End: Original strand, 30704398 - 30704476
Alignment:
Q  151 atttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccaca-tttttcagcttctaaat 228  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||| | ||||||| ||||||||||| |||||    
T  30704398 atttatttggttaactaagtggaaaaatagtggtcacgcgcattttagttgtgcgaccacattttttcagcttttaaat 30704476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 151 - 323
Target Start/End: Complemental strand, 7156182 - 7155998
Alignment:
Q  151 atttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct------------aaatagtggtcacg 238  Q
    |||||||||||||| ||| || ||||||| |||||||||  |||||||||||| || |||||||||||||||||            ||||||||||||      
T  7156182 atttatttggttaattaagtggaaaaataatggtcacgcatattttagttgcgcgatcacatttttcagcttctaaattctgaaaaaaatagtggtcata 7156083  T
Q  239 caactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 323  Q
     |||||| |||||||| ||| | | |||||||||||  ||||||||||||||  | |||||||||||| | |||||| |||||||    
T  7156082 taactgaaaaaatgtgatcatataaaccatatatttgattaactgaaattttctaaagtggtacaaaaagatgtacacattaaag 7155998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 30045940 - 30045885
Alignment:
Q  149 gaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgt 204  Q
    |||||||||||||||| |||||| |||||||||||||||||| |||||||||||||    
T  30045940 gaatttatttggttaattaaatggaaaaatagtggtcacgcgtattttagttgcgt 30045885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 224 - 317
Target Start/End: Complemental strand, 30704402 - 30704309
Alignment:
Q  224 taaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacata 317  Q
    ||||||||| |||||||||| |  ||| || |||||  |||||||||||||  ||||||||||||||  |||||||||||||| ||||||||||    
T  30704402 taaatagtgatcacgcaactaaataaacgtagtcacggagaccatatatttgattaactgaaattttacagagtggtacaaaaaggtgtacata 30704309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 225 - 321
Target Start/End: Original strand, 22169555 - 22169650
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    ||||| ||||||||||||| | |||||||||||||| | | |||| |||| ||||||| ||| |||| |||||||||| |||||||||||| |||||    
T  22169555 aaataatggtcacgcaactaaaaaaatgtggtcacacatatcataaatttggttaactaaaaattttcagagtggtac-aaagggtgtacagattaa 22169650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 323
Target Start/End: Original strand, 42034857 - 42034952
Alignment:
Q  228 tagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 323  Q
    |||||||||||||||| | |||||||| | ||| | |||||||||||  | ||||||||||||| ||||||||||||| || |||||  |||||||    
T  42034857 tagtggtcacgcaactaaaaaaatgtgattacacataccatatatttgatcaactgaaattttttagagtggtacaaagggatgtacgcattaaag 42034952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 247 - 321
Target Start/End: Complemental strand, 35922702 - 35922628
Alignment:
Q  247 aaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    |||||||||||||| | |||||||||||  ||||||||||||||| |||||| |||||| || |||||| |||||    
T  35922702 aaaatgtggtcacacataccatatatttgattaactgaaatttttcagagtgatacaaagggatgtacacattaa 35922628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 193
Target Start/End: Complemental strand, 2477370 - 2477302
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcat 193  Q
    |||||| || |||| |||||| |||||||||||||||||||||| |  ||||||||||| |||||||||    
T  2477370 agttgcgtggccactatttttacagaatttatttggttaactaagtcgaaaaatagtggccacgcgcat 2477302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 305
Target Start/End: Complemental strand, 33958991 - 33958911
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 305  Q
    |||| ||||||| ||| || | |||||||| | ||| ||||||||||||| ||||| |||||||||| |||||||||||||    
T  33958991 aaattgtggtcatgcagctaaaaaaatgtgattacatagaccatatatttggttaagtgaaatttttcagagtggtacaaa 33958911  T

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Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 321
Target Start/End: Original strand, 35922830 - 35922926
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    |||||||||||| |||||| | ||||| ||||| || |||||||| |||| ||||||| |||||||| | |||| ||||||  |||||||| |||||    
T  35922830 aaatagtggtcatgcaacttaaaaaatatggtcccacagaccataaatttggttaacttaaatttttcaaagtgatacaaagcggtgtacacattaa 35922926  T

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Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 264 - 315
Target Start/End: Original strand, 31189710 - 31189761
Alignment:
Q  264 accatatatttagttaactgaaatttttgagagtggtacaaaagggtgtaca 315  Q
    ||||||||||| |||||||||||||||| | ||||||||||| |||||||||    
T  31189710 accatatatttggttaactgaaattttttaaagtggtacaaaggggtgtaca 31189761  T

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Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 305
Target Start/End: Complemental strand, 36169410 - 36169337
Alignment:
Q  231 tggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 305  Q
    ||||||||||||| | ||||||||||||||   ||||||||||| ||||||| |||||||| | |||||||||||    
T  36169410 tggtcacgcaactaa-aaaatgtggtcacacctaccatatatttggttaactaaaatttttcaaagtggtacaaa 36169337  T

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Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 15221673 - 15221618
Alignment:
Q  132 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcac 187  Q
    ||||||| ||||||||||||||||||| ||||| ||| || ||||| |||||||||    
T  15221673 tgaccactattttttcagaatttatttagttaattaagtggaaaaagagtggtcac 15221618  T

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Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 19621655 - 19621613
Alignment:
Q  55 tgtacattcatttgtactattctgaaaaatttcagttaaccaa 97  Q
    |||||| || ||||||| |||||||||||||||||||||||||    
T  19621655 tgtacactcctttgtaccattctgaaaaatttcagttaaccaa 19621613  T

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Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 305
Target Start/End: Complemental strand, 15221625 - 15221572
Alignment:
Q  252 gtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 305  Q
    ||||||||| | ||||||||||| ||||||| ||||||| |||| |||||||||    
T  15221625 gtggtcacacaaaccatatatttggttaactaaaattttcgagaatggtacaaa 15221572  T

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Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 272
Target Start/End: Original strand, 7156178 - 7156226
Alignment:
Q  224 taaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatat 272  Q
    |||||||||||||| ||||| | ||||||||||||||  ||||||||||    
T  7156178 taaatagtggtcacacaactaaaaaaatgtggtcacacggaccatatat 7156226  T

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Target: scaffold1126 (Bit Score: 113; Significance: 5e-57; HSPs: 2)
Name: scaffold1126
Description:

Target: scaffold1126; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 125 - 305
Target Start/End: Original strand, 202 - 382
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 224  Q
    |||||| ||||||| | ||||||| || |||||||| ||| ||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  202 agttgcgtgaccactaatttttcaaaaattatttggataagtaagtggaaaaatagtggtcatgcgcattttagttgcgtgaccacatttttcagcttct 301  T
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 305  Q
    ||||||||||||||||||||| ||| ||||| |||| ||||||||||||| ||||||||||| |||| |||||||||||||    
T  302 aaatagtggtcacgcaactgaaaaagtgtggccacacagaccatatatttggttaactgaaaattttcagagtggtacaaa 382  T

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Target: scaffold1126; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 228 - 323
Target Start/End: Complemental strand, 217 - 121
Alignment:
Q  228 tagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaattttt-gagagtggtacaaaagggtgtacatattaaag 323  Q
    |||||||||||||||| | | |||||| ||||| || |||||||||| ||||||||||||||||  ||||||||||||||   |||||| |||||||    
T  217 tagtggtcacgcaactaaaacaatgtgatcacacagtccatatatttggttaactgaaatttttcaagagtggtacaaaaaaatgtacacattaaag 121  T

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Target: chr1 (Bit Score: 106; Significance: 8e-53; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 125 - 321
Target Start/End: Original strand, 29677078 - 29677263
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 224  Q
    |||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29677078 agttgcatgaccactattttttcagaatttatttggttaactaagtggaaaaatagtggtcacgcacattttagttgcgtgaccacatttttcagcttct 29677177  T
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    ||||||||||||| ||||||| |||       |||    |||||||||||  |||||| ||||||||||||||||||||||  |||||||| |||||    
T  29677178 aaatagtggtcactcaactgaaaaa-------cac----accatatatttgtttaacttaaatttttgagagtggtacaaagaggtgtacacattaa 29677263  T

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Target: chr1; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 140 - 346
Target Start/End: Complemental strand, 34364332 - 34364128
Alignment:
Q  140 attttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgc 239  Q
    |||||| |||||||| ||||||||||||| ||||||||| |||||||||  ||||||||||| |||||||||| |||||||||||||||| ||| |||||    
T  34364332 atttttccagaatttttttggttaactaagtgaaaaaattgtggtcacgttcattttagttgtgtgaccacatgtttcagcttctaaata-tggccacgc 34364234  T
Q  240 aactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatcaatcttt 339  Q
    |||||| ||||| |||||||| ||||||||||||||||||||| |||||||  |||||||||||||  | ||| |||||||| | || | | | ||||||    
T  34364233 aactga-aaaatatggtcacacagaccatatatttagttaacttaaattttccagagtggtacaaatagatgtgcatattaatggtgtcaacctatcttt 34364135  T
Q  340 attcaaa 346  Q
    |||||||    
T  34364134 attcaaa 34364128  T

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Target: chr1; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 125 - 290
Target Start/End: Complemental strand, 34490304 - 34490140
Alignment:
Q  125 agttgcatgaccacca-ttttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttc 223  Q
    |||||| ||||||| | |||||||||||||||||||||||||||| |  |||||||||||||| |||||||||| |||| ||||||||||||| ||||||    
T  34490304 agttgcgtgaccactagttttttcagaatttatttggttaactaactagaaaaatagtggtcatgcgcatttta-ttgcatgaccacattttttagcttc 34490206  T
Q  224 taaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttt 290  Q
    |||||||||||||  ||||||| ||||||| |||||| |||||||||||||||||||||||||||||    
T  34490205 taaatagtggtcatacaactgaaaaaatgt-gtcacacagaccatatatttagttaactgaaatttt 34490140  T

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Target: chr1; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 142 - 282
Target Start/End: Complemental strand, 25238575 - 25238436
Alignment:
Q  142 tttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaa 241  Q
    ||||||||||||||||||||||||||| || |||||||||||| |||| ||||||| || ||||||||||||||| ||||||||||||||||||||||||    
T  25238575 tttttcagaatttatttggttaactaagtggaaaaatagtggttacgcacatttta-ttacgtgaccacattttttagcttctaaatagtggtcacgcaa 25238477  T
Q  242 ctgataaaatgtggtcacaaagaccatatatttagttaact 282  Q
    |||| ||||| || ||| | |||||||||||||||||||||    
T  25238476 ctgaaaaaatttgatcatatagaccatatatttagttaact 25238436  T

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Target: chr1; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 125 - 344
Target Start/End: Complemental strand, 5831648 - 5831430
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 224  Q
    |||||| ||||||| | |||| |||||||||||||||||||||| || |||||| ||||| |  |||||||||||| || ||||| |||||| | |||||    
T  5831648 agttgcgtgaccactaattttccagaatttatttggttaactaagtggaaaaattgtggtaatacgcattttagttacgggaccatattttttaacttct 5831549  T
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagt 324  Q
    |||||||||||| |||||  | ||||| || ||||| | ||||||| ||||||||||| |||||||| ||| || |||||||||||||||  |||||||     
T  5831548 aaatagtggtcatgcaacaaacaaaatatgatcacacataccatatctttagttaactaaaatttttcagaatgttacaaaagggtgtactcattaaag- 5831450  T
Q  325 tgactatcaatctttattca 344  Q
    || ||| |||||||||||||    
T  5831449 tgtctaccaatctttattca 5831430  T

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Target: chr1; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 125 - 254
Target Start/End: Original strand, 29167803 - 29167931
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 224  Q
    |||||| ||||||| | |||||| |||||||||||||||||||| || |||||||||||||| |||||||||| ||||||||||| |||||| |||||||    
T  29167803 agttgcctgaccactagtttttcggaatttatttggttaactaagtggaaaaatagtggtcatgcgcatttta-ttgcgtgaccatattttttagcttct 29167901  T
Q  225 aaatagtggtcacgcaactgataaaatgtg 254  Q
    ||||||||||||||||||||| ||||||||    
T  29167902 aaatagtggtcacgcaactgaaaaaatgtg 29167931  T

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Target: chr1; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 125 - 305
Target Start/End: Complemental strand, 38952023 - 38951840
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccaca--tttttcagctt 222  Q
    |||||| ||||||| |||| | || ||||||||||||||||||| |  ||||||||||||||  ||||||||||||||||||| | |  |||||||| ||    
T  38952023 agttgcttgaccactatttctccaaaatttatttggttaactaagtagaaaaatagtggtcagacgcattttagttgcgtgactatatttttttcagttt 38951924  T
Q  223 ctaaatagtggtcacgcaactg-ataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 305  Q
    |||||||||||||||||| ||| | ||||||||||  || ||||||||||||| ||||||| ||||||| ||||||||||||||    
T  38951923 ctaaatagtggtcacgcagctgaaaaaaatgtggtttcatagaccatatatttggttaacttaaattttcgagagtggtacaaa 38951840  T

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Target: chr1; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 42604319 - 42604199
Alignment:
Q  140 attttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgc 239  Q
    ||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||  |||||| | |||| ||||||||||||||||| | ||    
T  42604319 attttttcagaatttatttcgttaactaagtggaaaaatagtggtcacgcgcattttagttgtatgaccatacttttaagcttctaaatagtggtgatgc 42604220  T
Q  240 aactgataaaatgtggtcaca 260  Q
    |||||| ||||||||||||||    
T  42604219 aactgaaaaaatgtggtcaca 42604199  T

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Target: chr1; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 141 - 305
Target Start/End: Original strand, 517421 - 517585
Alignment:
Q  141 ttttttcagaattt-atttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgc 239  Q
    |||||||||||||| |||||||||||||| | |||||||||| |||| |  |||||||||||||||| || |||||| | ||||||||||||||| ||||    
T  517421 ttttttcagaattttatttggttaactaagttaaaaaatagtagtcatgttcattttagttgcgtgatcatattttttaacttctaaatagtggttacgc 517520  T
Q  240 aactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 305  Q
    || ||| ||||||||||  || | | ||||||||| ||||||| ||||||||||||||| ||||||    
T  517521 aattga-aaaatgtggttgcacatatcatatatttggttaacttaaatttttgagagtgatacaaa 517585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 224 - 320
Target Start/End: Original strand, 5855201 - 5855297
Alignment:
Q  224 taaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatatta 320  Q
    |||||||||||||||||||| |  ||||||||||||| | ||||||||||| ||||||| |||||||| ||||||||||||||| ||||||||||||    
T  5855201 taaatagtggtcacgcaactaactaaatgtggtcacacataccatatatttggttaacttaaatttttcagagtggtacaaaagagtgtacatatta 5855297  T

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Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 228 - 321
Target Start/End: Original strand, 34490289 - 34490382
Alignment:
Q  228 tagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    |||||||||||||||| | |||||||||||||| ||||||||||||| || ||||||||||||| |||||||||||||  |||||||| |||||    
T  34490289 tagtggtcacgcaactaaaaaaatgtggtcacacagaccatatattttgtaaactgaaatttttcagagtggtacaaagtggtgtacacattaa 34490382  T

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Target: chr1; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 188 - 306
Target Start/End: Original strand, 9929834 - 9929951
Alignment:
Q  188 gcgcattttagttgcgtgaccacat-ttttcagcttctaaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaa 286  Q
    ||||||||||||||||||||||||| ||||| |     ||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||| |||||    
T  9929834 gcgcattttagttgcgtgaccacatattttctgaaa--aaatagtggtcacgcaaatgaaaaaatgtggtcacacagaccatatatttagttaattgaaa 9929931  T
Q  287 tttttgagagtggtacaaaa 306  Q
    ||||| | | ||||||||||    
T  9929932 tttttcaaaatggtacaaaa 9929951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 152 - 228
Target Start/End: Complemental strand, 2996101 - 2996025
Alignment:
Q  152 tttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaat 228  Q
    |||||||||||||||||  | |||||||| || ||||||||||||| ||||||||||||||||||||||||||||||    
T  2996101 tttatttggttaactaagcggaaaaatagcggccacgcgcattttatttgcgtgaccacatttttcagcttctaaat 2996025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 151 - 286
Target Start/End: Complemental strand, 9468199 - 9468064
Alignment:
Q  151 atttatttggttaactaaatga-aaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgataaa 249  Q
    |||||||||||||||||| ||  ||||||||| |||||   ||||||||||| |||| |||||||| |||||| |||||| ||||||  ||||||| |||    
T  9468199 atttatttggttaactaagtggcaaaaatagtagtcacatacattttagttgtgtgatcacattttacagcttttaaata-tggtcagacaactgaaaaa 9468101  T
Q  250 atgtggtcacaaagaccatatatttagttaactgaaa 286  Q
    || |||||||| | ||||||||||| |||||||||||    
T  9468100 atatggtcacacataccatatatttggttaactgaaa 9468064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 225 - 321
Target Start/End: Complemental strand, 13350999 - 13350903
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    ||||||| | || |||||||| |||| ||| ||||| | ||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||    
T  13350999 aaatagtagccatgcaactgaaaaaacgtgatcacacataccatatatttggttaactgaaattttcgagagtggtacaaaagggtgtacacattaa 13350903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 228 - 315
Target Start/End: Original strand, 5831633 - 5831720
Alignment:
Q  228 tagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtaca 315  Q
    |||||||||||||||| | ||||| |||||||| ||||||||||||| ||||| |||||||||| |||||| |||||| |||||||||    
T  5831633 tagtggtcacgcaactaaaaaaatatggtcacacagaccatatatttggttaattgaaatttttcagagtgatacaaaggggtgtaca 5831720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 250 - 323
Target Start/End: Original strand, 13351008 - 13351081
Alignment:
Q  250 atgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 323  Q
    ||||||||||||||||||||||||| ||||| | |||||||| ||||||||||||| ||||||||| |||||||    
T  13351008 atgtggtcacaaagaccatatatttggttaagttaaatttttcagagtggtacaaaggggtgtacacattaaag 13351081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 289
Target Start/End: Original strand, 38244801 - 38244863
Alignment:
Q  227 atagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaattt 289  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||| | ||||| ||||||    
T  38244801 atagtggtcacgcaactgaaaaaatgtggtcacacagaccatatatttggctaacttaaattt 38244863  T

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Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 125 - 189
Target Start/End: Complemental strand, 2570024 - 2569960
Alignment:
Q  125 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgc 189  Q
    |||||| ||||||| ||||||  ||||||||||||||||||||| || |||||||||||||||||    
T  2570024 agttgcgtgaccactatttttctagaatttatttggttaactaagtggaaaaatagtggtcacgc 2569960  T

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Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 225 - 305
Target Start/End: Original strand, 38952005 - 38952085
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 305  Q
    |||||||||||| |||||| | ||||| |||||||| | |||||| |||| |||||||||||||||| |||||| ||||||    
T  38952005 aaatagtggtcaagcaactaaaaaaatatggtcacatataccatacattttgttaactgaaatttttcagagtgatacaaa 38952085  T

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Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 291
Target Start/End: Complemental strand, 29167818 - 29167756
Alignment:
Q  228 tagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaattttt 291  Q
    ||||||||| |||||| | |||||||||||||| | ||||||||||||||||||||||||||||    
T  29167818 tagtggtcaggcaactaa-aaaatgtggtcacacaaaccatatatttagttaactgaaattttt 29167756  T

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Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 151 - 291
Target Start/End: Complemental strand, 5855205 - 5855056
Alignment:
Q  151 atttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct-----------aaatagtggtcacgc 239  Q
    |||||||||||||| |||||| ||||||||  ||||  || |||||||||| |||||||||| ||| ||||| |           |||| |||||||| |    
T  5855205 atttatttggttaattaaatggaaaaatagacgtca--cgtattttagttgtgtgaccacatattttagcttttaaatgttggaaaaattgtggtcacac 5855108  T
Q  240 aactgataaaatgtggtcacaaagaccatatatttagttaactgaaattttt 291  Q
    |||||| || ||||||||||| ||||||||||||| |||| |||||||||||    
T  5855107 aactgaaaatatgtggtcacacagaccatatatttggttagctgaaattttt 5855056  T

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Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 225 - 323
Target Start/End: Complemental strand, 29677096 - 29676999
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 323  Q
    |||||||||||| |||||| | |||||||||||||| || |||||||||| ||||||| |||||||| | |||| |||||| ||  ||||| |||||||    
T  29677096 aaatagtggtcatgcaactaa-aaaatgtggtcacacaggccatatatttggttaactaaaatttttcaaagtgctacaaagggacgtacacattaaag 29676999  T

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Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 247 - 304
Target Start/End: Original strand, 25238596 - 25238653
Alignment:
Q  247 aaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaa 304  Q
    |||||||||||||| | |||||||||||  ||||||||||||||| ||||||||||||    
T  25238596 aaaatgtggtcacagaaaccatatatttgattaactgaaatttttcagagtggtacaa 25238653  T

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Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 321
Target Start/End: Original strand, 2570006 - 2570101
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    ||||||||||||||||||| | ||||| |||| ||| | |||||||| || ||||||| |||||||  |||| ||||| |||||||||||| |||||    
T  2570006 aaatagtggtcacgcaactcaaaaaatatggtaacacaaaccatatacttggttaacttaaattttccagagcggtac-aaagggtgtacacattaa 2570101  T

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Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 225 - 321
Target Start/End: Complemental strand, 2569974 - 2569876
Alignment:
Q  225 aaatagtggtcacgcaactgataaaa--tgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    ||||||||||||||||| ||| ||||  ||| |||||| ||||||||||||| |||||| |||| |||| ||| | |||||||   |||||||||||||    
T  2569974 aaatagtggtcacgcaattgaaaaaaaatgtagtcacacagaccatatatttggttaaccgaaaatttttagaatagtacaaagaagtgtacatattaa 2569876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 225 - 274
Target Start/End: Complemental strand, 24708123 - 24708074
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatattt 274  Q
    |||||||||||||||| || | |||||||||||||| |||||||||||||    
T  24708123 aaatagtggtcacgcaccttaaaaaatgtggtcacacagaccatatattt 24708074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 263 - 324
Target Start/End: Original strand, 28499662 - 28499723
Alignment:
Q  263 gaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagt 324  Q
    |||||||||||| |||||||||||||||| ||| |||||||||| | ||||||  |||||||    
T  28499662 gaccatatatttggttaactgaaattttttagaatggtacaaaatgatgtacacgttaaagt 28499723  T

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Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 38245012 - 38245069
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaact 282  Q
    |||||||||||||||| |||| ||||| |||| ||| ||||||||||||||| |||||    
T  38245012 aaatagtggtcacgcagctgaaaaaatctggttacatagaccatatatttagctaact 38245069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 226 - 274
Target Start/End: Complemental strand, 17227548 - 17227500
Alignment:
Q  226 aatagtggtcacgcaactgataaaatgtggtcacaaagaccatatattt 274  Q
    ||||||||||||||| || | |||||||||||||| |||||||||||||    
T  17227548 aatagtggtcacgcaccttaaaaaatgtggtcacacagaccatatattt 17227500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 179
Target Start/End: Original strand, 9929739 - 9929778
Alignment:
Q  140 attttttcagaatttatttggttaactaaatgaaaaaata 179  Q
    ||||||||| |||||||||||||||||||||| |||||||    
T  9929739 attttttcaaaatttatttggttaactaaatggaaaaata 9929778  T

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Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 5855322 - 5855250
Alignment:
Q  22 aagagcaatgataggtaggcacccttaatgatatgtacattcatttgtactattctgaaaaatttcagttaaccaa 97  Q
    |||||||||||||||||| ||||  ||||   ||||||| || ||||||| | |||||||||||| ||||||||||    
T  5855322 aagagcaatgataggtagacaccactaat---atgtacactcttttgtaccactctgaaaaatttaagttaaccaa 5855250  T

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Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 305
Target Start/End: Complemental strand, 9929735 - 9929662
Alignment:
Q  232 ggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 305  Q
    |||| ||||||| | | |||||||||| | | ||||||||||| ||||||| |||||||  |||||||||||||    
T  9929735 ggtcgcgcaactaaaataatgtggtcatacaaaccatatatttggttaacttaaattttcaagagtggtacaaa 9929662  T

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Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 315
Target Start/End: Complemental strand, 2996003 - 2995928
Alignment:
Q  239 caactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtaca 315  Q
    ||||||| |||||||||||||| | |||||||||||  |||| | || ||||| | |||||||||||||| ||||||    
T  2996003 caactgaaaaaatgtggtcacaca-accatatatttgattaattaaattttttcaaagtggtacaaaaggatgtaca 2995928  T

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Target: scaffold0251 (Bit Score: 86; Significance: 7e-41; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 140 - 321
Target Start/End: Original strand, 10623 - 10804
Alignment:
Q  140 attttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgc 239  Q
    ||||||| ||||||||||||||||||||| || ||||||| |||||||| | ||||||||||||||||||||||||| |  || ||||||||||||| ||    
T  10623 attttttgagaatttatttggttaactaagtggaaaaataatggtcacgggtattttagttgcgtgaccacattttttattttttaaatagtggtcatgc 10722  T
Q  240 aactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    |||| | ||||| | |||||  ||||||||||||| ||||| |||||||||  ||||||||||||| |  ||||||||||||    
T  10723 aacttaaaaaatatagtcacctagaccatatatttggttaattgaaattttctagagtggtacaaaggaatgtacatattaa 10804  T

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Target: scaffold0123 (Bit Score: 81; Significance: 6e-38; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 132 - 305
Target Start/End: Original strand, 24021 - 24195
Alignment:
Q  132 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 231  Q
    ||||||| | |||||||||||||||||||| || ||| || |||||||||||||||||||||||||  ||||| ||||||||||| ||||||||||||||    
T  24021 tgaccactagtttttcagaatttatttggtaaaataagtggaaaaatagtggtcacgcgcatttta-atgcgtaaccacattttttagcttctaaatagt 24119  T
Q  232 ggtcacgcaactgataaaatgtggtcacaaagac--catatatttagttaactgaaatttttgagagtggtacaaa 305  Q
    ||||| |||||||| ||||||| |||||| ||||  ||||||||  ||| |||||||||||| ||| || ||||||    
T  24120 ggtcatgcaactgaaaaaatgtagtcacatagacgacatatattcggttcactgaaatttttcagattgatacaaa 24195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 201 - 343
Target Start/End: Original strand, 21549 - 21689
Alignment:
Q  201 gcgtgaccacatttttcagcttctaaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggt 300  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||  ||||||||| |||||  | |||||     
T  21549 gcgtgaccacatttttcagcttctatatagtggtcacgcaactgaaaaaatgtggtcacacagaccatatattcggttaactgagattttctaaagtggc 21648  T
Q  301 acaaaagggtgtacatattaaagttgactatcaatctttattc 343  Q
    |||||   ||||||| ||||||| || ||| ||||||||||||    
T  21649 acaaa--cgtgtacacattaaaggtgtctaccaatctttattc 21689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 322
Target Start/End: Complemental strand, 21529 - 21432
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaa 322  Q
    ||||| ||||||||||||| | || || || | ||| ||||| ||||||| |||||||||||||||| | | ||||| ||| || |||||| ||||||    
T  21529 aaataatggtcacgcaacttaaaatatatgcttacacagaccgtatatttggttaactgaaattttttaaaatggtataaatggatgtacacattaaa 21432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 151 - 228
Target Start/End: Complemental strand, 87112 - 87035
Alignment:
Q  151 atttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaat 228  Q
    |||||||||||||||||| |  |||||||||||||||| | |||||||||||||||||||||||||||| ||||||||    
T  87112 atttatttggttaactaagtagaaaaatagtggtcacgtgtattttagttgcgtgaccacatttttcagtttctaaat 87035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 321
Target Start/End: Complemental strand, 86991 - 86895
Alignment:
Q  225 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 321  Q
    ||||||||||||| |||| || |||||||||||||| | || ||||||||  |||| |||| ||||  ||| ||||| ||| ||||||||| |||||    
T  86991 aaatagtggtcacacaaccgaaaaaatgtggtcacacaaactatatatttgattaattgaagttttctagaatggtagaaaggggtgtacacattaa 86895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 151 - 228
Target Start/End: Complemental strand, 112235 - 112158
Alignment:
Q  151 atttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaat 228  Q
    |||||||| ||||||||| || |||||||||||||||| |||||||| |||||||||||| |||||||||||||||||    
T  112235 atttatttagttaactaagtggaaaaatagtggtcacgtgcattttaattgcgtgaccacgtttttcagcttctaaat 112158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 151 - 228
Target Start/End: Complemental strand, 5947 - 5870
Alignment:
Q  151 atttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaat 228  Q
    |||||||||||||| ||| || |||||||||||||||||| ||||||||||||  |||||| |||||||||| |||||    
T  5947 atttatttggttaattaagtgcaaaaatagtggtcacgcgtattttagttgcgacaccacacttttcagcttttaaat 5870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 24738 - 24798
Alignment:
Q  231 tggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaattttt 291  Q
    ||||||||||||| |||||||||||||||| ||||||||||||| | |||||||| |||||    
T  24738 tggtcacgcaacttataaaatgtggtcacatagaccatatatttggctaactgaatttttt 24798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 226 - 289
Target Start/End: Original strand, 24932 - 24995
Alignment:
Q  226 aatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaattt 289  Q
    |||||||||||| ||||||| || ||||||||||| |||| |||||||| | ||||||||||||    
T  24932 aatagtggtcacacaactgaaaacatgtggtcacacagactatatatttggctaactgaaattt 24995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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