View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17552_low_16 (Length: 257)

Name: NF17552_low_16
Description: NF17552
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17552_low_16
NF17552_low_16
[»] chr7 (43 HSPs)
chr7 (28-256)||(20963561-20963789)
chr7 (28-256)||(20419602-20419831)
chr7 (28-256)||(23704744-23704973)
chr7 (28-256)||(38879790-38880019)
chr7 (29-256)||(20458758-20458986)
chr7 (29-256)||(41600025-41600253)
chr7 (31-256)||(12006609-12006835)
chr7 (28-256)||(23383566-23383795)
chr7 (28-256)||(48672345-48672574)
chr7 (28-254)||(44816901-44817128)
chr7 (28-256)||(10409457-10409686)
chr7 (28-256)||(28218245-28218458)
chr7 (48-256)||(31851325-31851534)
chr7 (48-256)||(7658057-7658264)
chr7 (48-224)||(33162651-33162827)
chr7 (56-254)||(1250300-1250499)
chr7 (117-256)||(6465937-6466077)
chr7 (28-187)||(24194944-24195108)
chr7 (28-158)||(25772429-25772559)
chr7 (28-158)||(48648327-48648457)
chr7 (167-257)||(48648434-48648525)
chr7 (155-256)||(25772525-25772626)
chr7 (29-104)||(16995266-16995341)
chr7 (198-257)||(7658053-7658113)
chr7 (118-158)||(24195056-24195096)
chr7 (29-105)||(38879959-38880035)
chr7 (28-105)||(1250441-1250518)
chr7 (29-74)||(20963760-20963805)
chr7 (28-105)||(23383735-23383812)
chr7 (28-104)||(12006776-12006852)
chr7 (118-158)||(23704921-23704961)
chr7 (118-158)||(25772441-25772481)
chr7 (118-158)||(38879802-38879842)
chr7 (28-104)||(41600194-41600270)
chr7 (28-105)||(25772566-25772643)
chr7 (28-77)||(28218426-28218475)
chr7 (48-77)||(44817098-44817127)
chr7 (118-158)||(20419614-20419654)
chr7 (48-80)||(20963651-20963683)
chr7 (118-158)||(28218257-28218297)
chr7 (118-158)||(44816913-44816953)
chr7 (228-256)||(44816998-44817026)
chr7 (28-104)||(48672515-48672591)
[»] chr3 (49 HSPs)
chr3 (28-256)||(21632979-21633208)
chr3 (28-257)||(16722073-16722303)
chr3 (28-256)||(19112831-19113060)
chr3 (28-256)||(45003579-45003808)
chr3 (28-256)||(9267041-9267270)
chr3 (28-256)||(45969998-45970227)
chr3 (29-256)||(30500108-30500336)
chr3 (28-256)||(20853762-20853991)
chr3 (30-255)||(35995746-35995972)
chr3 (28-256)||(14171652-14171881)
chr3 (48-256)||(49986611-49986820)
chr3 (28-256)||(52552758-52552983)
chr3 (28-223)||(15328577-15328772)
chr3 (43-256)||(17465449-17465662)
chr3 (28-256)||(14161954-14162183)
chr3 (28-256)||(33372489-33372716)
chr3 (29-256)||(14262103-14262331)
chr3 (28-256)||(5800688-5800917)
chr3 (29-256)||(43572472-43572702)
chr3 (48-256)||(47575359-47575567)
chr3 (28-252)||(4204774-4204999)
chr3 (29-254)||(38283635-38283861)
chr3 (129-256)||(11003815-11003943)
chr3 (176-256)||(17649224-17649305)
chr3 (28-105)||(14161937-14162014)
chr3 (28-105)||(52552923-52553000)
chr3 (28-105)||(5800671-5800748)
chr3 (28-105)||(14262271-14262348)
chr3 (28-105)||(45969981-45970058)
chr3 (118-155)||(49986788-49986825)
chr3 (122-158)||(5800869-5800905)
chr3 (118-158)||(9267053-9267093)
chr3 (28-100)||(45058731-45058803)
chr3 (43-105)||(21632977-21633039)
chr3 (117-158)||(4204786-4204827)
chr3 (121-158)||(14161949-14161986)
chr3 (118-151)||(20853781-20853814)
chr3 (28-77)||(20853959-20854008)
chr3 (117-158)||(43572650-43572691)
chr3 (118-151)||(45003756-45003789)
chr3 (197-256)||(4204791-4204851)
chr3 (122-158)||(14162135-14162171)
chr3 (122-158)||(16722255-16722291)
chr3 (118-158)||(21633156-21633196)
chr3 (122-158)||(30500119-30500155)
chr3 (29-77)||(30500304-30500352)
chr3 (28-104)||(33372472-33372548)
chr3 (118-158)||(35995756-35995796)
chr3 (29-77)||(43572456-43572504)
[»] chr4 (52 HSPs)
chr4 (28-256)||(9516676-9516905)
chr4 (28-256)||(37012773-37013002)
chr4 (28-256)||(38574034-38574263)
chr4 (32-256)||(7819097-7819322)
chr4 (28-254)||(9396784-9397011)
chr4 (32-256)||(46046494-46046719)
chr4 (28-256)||(9619063-9619291)
chr4 (28-256)||(31090127-31090356)
chr4 (48-257)||(4355963-4356173)
chr4 (31-256)||(31944033-31944259)
chr4 (48-256)||(3018095-3018304)
chr4 (28-256)||(15640798-15641027)
chr4 (43-253)||(18667375-18667586)
chr4 (28-256)||(18713043-18713272)
chr4 (28-256)||(34064048-34064277)
chr4 (48-256)||(13132027-13132236)
chr4 (28-256)||(3273705-3273932)
chr4 (28-256)||(48579932-48580161)
chr4 (28-185)||(48259906-48260063)
chr4 (28-158)||(26252418-26252549)
chr4 (155-256)||(26252351-26252453)
chr4 (28-136)||(35376332-35376440)
chr4 (28-105)||(3018078-3018155)
chr4 (48-105)||(4355967-4356024)
chr4 (155-256)||(35376245-35376344)
chr4 (28-77)||(15640781-15640830)
chr4 (176-256)||(41947070-41947151)
chr4 (118-158)||(9516688-9516728)
chr4 (28-105)||(9619046-9619123)
chr4 (28-77)||(38574231-38574280)
chr4 (118-158)||(9619239-9619279)
chr4 (118-158)||(31090139-31090179)
chr4 (118-158)||(38574046-38574086)
chr4 (31-105)||(26252337-26252411)
chr4 (31-105)||(37012942-37013016)
chr4 (121-158)||(3018090-3018127)
chr4 (32-77)||(3273692-3273737)
chr4 (121-158)||(3273700-3273737)
chr4 (28-105)||(9396765-9396842)
chr4 (28-105)||(13132176-13132253)
chr4 (28-105)||(18713026-18713103)
chr4 (28-73)||(31944016-31944061)
chr4 (228-257)||(31944136-31944165)
chr4 (28-105)||(34064217-34064294)
chr4 (121-158)||(38574231-38574268)
chr4 (28-77)||(48580129-48580178)
chr4 (122-158)||(13132205-13132241)
chr4 (118-158)||(26252497-26252537)
chr4 (118-158)||(31944210-31944250)
chr4 (122-158)||(41947120-41947156)
chr4 (118-158)||(46046502-46046542)
chr4 (28-104)||(46046660-46046736)
[»] chr5 (49 HSPs)
chr5 (31-256)||(993816-994041)
chr5 (28-256)||(7125983-7126212)
chr5 (28-256)||(4919056-4919285)
chr5 (28-256)||(17762365-17762594)
chr5 (28-256)||(14143984-14144213)
chr5 (28-256)||(24837235-24837464)
chr5 (31-254)||(41001422-41001646)
chr5 (28-257)||(20709278-20709508)
chr5 (28-257)||(31799706-31799936)
chr5 (28-256)||(24650766-24650994)
chr5 (48-256)||(6817208-6817416)
chr5 (28-256)||(24074386-24074614)
chr5 (28-256)||(29444889-29445118)
chr5 (28-200)||(23979042-23979213)
chr5 (28-256)||(18336551-18336768)
chr5 (48-223)||(22571163-22571338)
chr5 (29-158)||(14411847-14411977)
chr5 (155-257)||(14411779-14411882)
chr5 (1-133)||(30512326-30512459)
chr5 (1-133)||(30552666-30552799)
chr5 (159-256)||(27159154-27159252)
chr5 (28-158)||(27159056-27159185)
chr5 (28-105)||(7126152-7126229)
chr5 (28-105)||(14143967-14144044)
chr5 (118-158)||(993825-993865)
chr5 (29-105)||(24074370-24074446)
chr5 (118-158)||(24837247-24837287)
chr5 (28-105)||(17762348-17762425)
chr5 (117-158)||(24074561-24074602)
chr5 (118-158)||(4919068-4919108)
chr5 (29-101)||(20959330-20959402)
chr5 (117-153)||(22571160-22571196)
chr5 (227-257)||(20947068-20947098)
chr5 (117-158)||(6817200-6817241)
chr5 (197-257)||(6817204-6817265)
chr5 (121-158)||(7126180-7126217)
chr5 (117-158)||(14143979-14144020)
chr5 (117-158)||(20709290-20709331)
chr5 (117-158)||(23979160-23979201)
chr5 (121-158)||(29444884-29444921)
chr5 (48-105)||(29444892-29444949)
chr5 (29-73)||(6817388-6817432)
chr5 (118-158)||(14411926-14411966)
chr5 (117-153)||(20947061-20947097)
chr5 (29-105)||(27159192-27159268)
chr5 (122-158)||(29445070-29445106)
chr5 (118-162)||(30512361-30512405)
chr5 (118-162)||(30552701-30552745)
chr5 (118-158)||(41001431-41001471)
[»] scaffold0361 (2 HSPs)
scaffold0361 (28-256)||(4646-4875)
scaffold0361 (118-158)||(4823-4863)
[»] chr8 (34 HSPs)
chr8 (28-256)||(10108453-10108682)
chr8 (28-254)||(42113050-42113277)
chr8 (31-256)||(26136768-26136994)
chr8 (56-256)||(17622981-17623182)
chr8 (28-256)||(22494468-22494696)
chr8 (28-256)||(21148003-21148231)
chr8 (28-256)||(30789573-30789802)
chr8 (28-256)||(43851730-43851959)
chr8 (28-223)||(14767573-14767768)
chr8 (28-256)||(7689606-7689835)
chr8 (28-254)||(5554954-5555181)
chr8 (28-256)||(14820377-14820606)
chr8 (28-256)||(42605836-42606065)
chr8 (48-256)||(2583403-2583612)
chr8 (56-256)||(43481408-43481609)
chr8 (28-199)||(26532849-26533020)
chr8 (29-100)||(10171383-10171454)
chr8 (28-105)||(10108436-10108513)
chr8 (28-105)||(14820360-14820437)
chr8 (31-105)||(21148171-21148245)
chr8 (48-105)||(5554955-5555012)
chr8 (121-158)||(7689601-7689638)
chr8 (121-158)||(10108448-10108485)
chr8 (121-158)||(14820372-14820409)
chr8 (28-105)||(17623122-17623199)
chr8 (121-158)||(21148199-21148236)
chr8 (122-158)||(5555133-5555169)
chr8 (122-158)||(10108634-10108670)
chr8 (122-158)||(14820558-14820594)
chr8 (118-158)||(22494644-22494684)
chr8 (118-158)||(26136945-26136985)
chr8 (197-256)||(30789590-30789650)
chr8 (117-153)||(30789590-30789626)
chr8 (28-104)||(30789743-30789819)
[»] chr6 (38 HSPs)
chr6 (28-256)||(24732021-24732250)
chr6 (91-254)||(3229992-3230155)
chr6 (28-253)||(26385344-26385566)
chr6 (28-211)||(33714553-33714736)
chr6 (36-256)||(2299385-2299604)
chr6 (28-256)||(9481265-9481494)
chr6 (29-256)||(30618045-30618272)
chr6 (48-256)||(30458987-30459196)
chr6 (43-256)||(10321811-10322026)
chr6 (28-167)||(18500380-18500520)
chr6 (48-206)||(14680968-14681126)
chr6 (43-158)||(33637709-33637825)
chr6 (48-153)||(32017622-32017727)
chr6 (122-254)||(17142798-17142930)
chr6 (122-255)||(18500506-18500641)
chr6 (155-256)||(33637642-33637744)
chr6 (155-256)||(32017698-32017799)
chr6 (29-109)||(9854118-9854198)
chr6 (117-158)||(9854146-9854187)
chr6 (118-158)||(33714565-33714605)
chr6 (28-105)||(9481248-9481325)
chr6 (28-77)||(32017767-32017816)
chr6 (118-158)||(18500392-18500432)
chr6 (118-158)||(24732198-24732238)
chr6 (29-105)||(30618029-30618105)
chr6 (43-105)||(10321966-10322028)
chr6 (117-154)||(14680964-14681001)
chr6 (28-77)||(19284195-19284244)
chr6 (208-256)||(19284212-19284261)
chr6 (28-73)||(26385541-26385586)
chr6 (121-158)||(32017767-32017804)
chr6 (122-158)||(9481446-9481482)
chr6 (197-256)||(9854122-9854182)
chr6 (228-256)||(17142801-17142829)
chr6 (118-158)||(26385356-26385396)
chr6 (228-256)||(26385441-26385469)
chr6 (114-158)||(30618040-30618084)
chr6 (228-256)||(33714650-33714678)
[»] chr2 (39 HSPs)
chr2 (28-256)||(22263257-22263486)
chr2 (28-254)||(26560620-26560847)
chr2 (43-256)||(39878185-39878399)
chr2 (28-256)||(23806035-23806264)
chr2 (28-256)||(17463174-17463403)
chr2 (28-256)||(17850652-17850881)
chr2 (28-256)||(26135900-26136129)
chr2 (29-256)||(15106150-15106378)
chr2 (31-256)||(42670788-42671014)
chr2 (43-256)||(13284489-13284703)
chr2 (48-256)||(19251553-19251762)
chr2 (28-252)||(20498832-20499057)
chr2 (94-256)||(23854798-23854961)
chr2 (48-256)||(33290132-33290341)
chr2 (28-158)||(26236277-26236407)
chr2 (31-158)||(30390528-30390655)
chr2 (155-256)||(26236210-26236311)
chr2 (43-144)||(13254632-13254733)
chr2 (117-158)||(13284667-13284708)
chr2 (204-256)||(13254580-13254633)
chr2 (28-77)||(19251536-19251585)
chr2 (117-158)||(19251729-19251770)
chr2 (28-105)||(22263426-22263503)
chr2 (28-105)||(26236193-26236270)
chr2 (117-158)||(33290127-33290168)
chr2 (28-105)||(42670954-42671031)
chr2 (118-158)||(23806212-23806252)
chr2 (29-105)||(23854901-23854977)
chr2 (118-158)||(30390537-30390577)
chr2 (122-158)||(42670797-42670833)
chr2 (117-156)||(33290308-33290347)
chr2 (30-104)||(17850822-17850896)
chr2 (117-158)||(13284486-13284527)
chr2 (121-158)||(19251548-19251585)
chr2 (121-158)||(22263454-22263491)
chr2 (28-105)||(26135883-26135960)
chr2 (48-105)||(26560789-26560846)
chr2 (117-153)||(13254695-13254731)
chr2 (122-158)||(22263269-22263305)
[»] chr1 (49 HSPs)
chr1 (28-256)||(30299314-30299543)
chr1 (48-256)||(13229815-13230023)
chr1 (28-256)||(39711155-39711384)
chr1 (28-256)||(39826116-39826341)
chr1 (28-256)||(4907028-4907257)
chr1 (28-256)||(17606391-17606620)
chr1 (28-256)||(33628756-33628985)
chr1 (43-256)||(52058092-52058303)
chr1 (28-256)||(20995752-20995980)
chr1 (28-256)||(24467711-24467939)
chr1 (29-256)||(48072044-48072272)
chr1 (28-253)||(8292890-8293119)
chr1 (29-223)||(42510081-42510275)
chr1 (48-240)||(43539446-43539639)
chr1 (31-255)||(29696648-29696867)
chr1 (28-256)||(18462368-18462596)
chr1 (28-256)||(39970712-39970940)
chr1 (28-153)||(34749203-34749328)
chr1 (48-172)||(7473878-7474002)
chr1 (155-256)||(34749299-34749400)
chr1 (94-217)||(215044-215167)
chr1 (28-101)||(17606374-17606447)
chr1 (48-98)||(18342261-18342311)
chr1 (28-105)||(8292870-8292947)
chr1 (117-158)||(16294206-16294247)
chr1 (168-253)||(30780270-30780356)
chr1 (28-105)||(4907197-4907274)
chr1 (36-105)||(20995743-20995812)
chr1 (28-105)||(39711138-39711215)
chr1 (121-158)||(39711150-39711187)
chr1 (28-105)||(43539413-43539490)
chr1 (118-158)||(4907040-4907080)
chr1 (117-153)||(7473875-7473911)
chr1 (118-158)||(8293067-8293107)
chr1 (29-105)||(16294182-16294258)
chr1 (28-88)||(30252150-30252210)
chr1 (197-255)||(18462519-18462578)
chr1 (118-152)||(34749221-34749255)
chr1 (118-152)||(39711332-39711366)
chr1 (118-155)||(18342279-18342316)
chr1 (28-77)||(24467694-24467743)
chr1 (117-158)||(24467886-24467927)
chr1 (28-73)||(30299297-30299342)
chr1 (197-257)||(39970728-39970789)
chr1 (117-158)||(42510092-42510133)
chr1 (117-158)||(52058089-52058130)
chr1 (122-158)||(17606572-17606608)
chr1 (118-158)||(29696818-29696858)
chr1 (228-256)||(42510177-42510205)
[»] scaffold0141 (1 HSPs)
scaffold0141 (28-249)||(8413-8634)
[»] scaffold0809 (3 HSPs)
scaffold0809 (48-256)||(1493-1702)
scaffold0809 (120-158)||(1672-1710)
scaffold0809 (28-105)||(1476-1553)
[»] scaffold0185 (2 HSPs)
scaffold0185 (28-256)||(3935-4164)
scaffold0185 (48-105)||(4104-4161)
[»] scaffold0881 (1 HSPs)
scaffold0881 (48-255)||(306-513)
[»] scaffold0477 (1 HSPs)
scaffold0477 (29-163)||(4924-5059)
[»] scaffold0449 (3 HSPs)
scaffold0449 (155-256)||(7392-7494)
scaffold0449 (28-157)||(7292-7426)
scaffold0449 (118-158)||(7304-7344)
[»] scaffold0176 (2 HSPs)
scaffold0176 (129-256)||(15800-15927)
scaffold0176 (33-105)||(15867-15939)
[»] scaffold0117 (2 HSPs)
scaffold0117 (197-256)||(12217-12277)
scaffold0117 (28-106)||(12216-12294)
[»] scaffold0352 (2 HSPs)
scaffold0352 (122-158)||(4745-4781)
scaffold0352 (228-256)||(4750-4778)


Alignment Details
Target: chr7 (Bit Score: 157; Significance: 1e-83; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 20963561 - 20963789
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    |||||||||||||| |||| ||||| | |||||| |||||||||||||||||||| |||  |||||||||||||||||||||  || |||||||||||||    
T  20963561 gatttagatttagtccctgtaattttagattcttccacttttggtccctcattccgccacataagcagaatctgcatacatggcacgtaaaatgagggac 20963660  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaaggat 227  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||     
T  20963661 caaaagtggaagaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacagggacgtaatttatgcaaattatgttgacgtgatgaaaggag 20963760  T
Q  228 gaccaaaagtggaggaatctgaaattaca 256  Q
    ||||||||||| | |||||||||||||||    
T  20963761 gaccaaaagtgaaagaatctgaaattaca 20963789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 20419602 - 20419831
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| |||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||  || |||||||||||||    
T  20419602 gatttagattttgtccctgtaatttcatattcttccatttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggac 20419701  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| | |||||||||||| ||||||||||||| |||||||||||     
T  20419702 caaaagtggaggaatatgaaattacagggaccaaaagtgggaggaatctgaaattacaaggacgtaatttatgaagattttgttgacttgatgaaaggag 20419801  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     |||||||||| || |||||||||||||||    
T  20419802 ggaccaaaagtagaagaatctgaaattaca 20419831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 23704973 - 23704744
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||  || |||||||||||||    
T  23704973 gatttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggac 23704874  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||| | |||||||||||||||| | ||||| |||||||||||     
T  23704873 caaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggaagtaatttatgcagattctattgacttgatgaaaggag 23704774  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||||| |||||||||||||||    
T  23704773 ggaccaaaagtggaagaatctgaaattaca 23704744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 38879790 - 38880019
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||    
T  38879790 gatttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacataaaatgagggac 38879889  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||  ||||||||| |||||||| |  |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| || ||||||||     
T  38879890 caaatttggaggaatctgaaattatagagaccaaaagtgggaggaatatgaaattacagggacgtaatttatgcagattctgttgacttggtgaaaggag 38879989  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||||| |||||||||||||||    
T  38879990 ggaccaaaagtggaagaatctgaaattaca 38880019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 29 - 256
Target Start/End: Original strand, 20458758 - 20458986
Alignment:
Q  29 atttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggacc 128  Q
    |||||||||| ||  ||| ||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||  || ||||||||||||||    
T  20458758 atttagattttgtcgctgtaatttcagattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggacc 20458857  T
Q  129 aaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-t 227  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||| ||| ||||||| |||| ||||||      
T  20458858 aaaagtggaggaatctgaaattacaaggaccaaaagcgggaggaatctgaaattacagggacgtaatttatgcaaattctgttgacttgatcaaaggagg 20458957  T
Q  228 gaccaaaagtggaggaatctgaaattaca 256  Q
    ||||||||||||| |||||||||||||||    
T  20458958 gaccaaaagtggaagaatctgaaattaca 20458986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 29 - 256
Target Start/End: Original strand, 41600025 - 41600253
Alignment:
Q  29 atttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggacc 128  Q
    |||||||||| || |||| ||||||| |||||| ||| |||| ||||||||||||||| || |||||||||||||||||||  || |||||||||||| |    
T  41600025 atttagattttgtccctgtaatttcagattcttccacatttgatccctcattccaccacgttagcagaatctgcatacatggcacgtaaaatgagggatc 41600124  T
Q  129 aaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-t 227  Q
    |||||||||||||| |||||||||| |||||||||||||||||||| |||||||||| | |||||||| |||||||||||| ||||||||||||||||      
T  41600125 aaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacaaggacgtaattgatgcagattttgctgacgtgatgaaaggagg 41600224  T
Q  228 gaccaaaagtggaggaatctgaaattaca 256  Q
    ||||||||||||| |||||||||||||||    
T  41600225 gaccaaaagtggaagaatctgaaattaca 41600253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 31 - 256
Target Start/End: Original strand, 12006609 - 12006835
Alignment:
Q  31 ttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaa 130  Q
    |||||||| || |||| ||||||| |||||| |||||||| ||||||||||||||| || |||||||||||||||||||  || |||||||||||| |||    
T  12006609 ttagattttgtccctgtaatttcagattcttccacttttgatccctcattccaccacgttagcagaatctgcatacatggcacgtaaaatgagggatcaa 12006708  T
Q  131 aagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tga 229  Q
    |||||||||||| ||||||||||  ||||||||||||||||||| |||||||||| | |||||||| |||||||||||| ||||||||||||||||  ||    
T  12006709 aagtggaggaatctgaaattacagtgaccaaaagtgggaggaatctgaaattacaaggacgtaattgatgcagattttgctgacgtgatgaaaggaggga 12006808  T
Q  230 ccaaaagtggaggaatctgaaattaca 256  Q
    ||||||||||| |||||||||||||||    
T  12006809 ccaaaagtggaagaatctgaaattaca 12006835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 23383566 - 23383795
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||  |||||||||||||| || |||| |||||||||||||||| ||||||||||||||||||||||| || |||||||||||||    
T  23383566 gatttagattttgtccctataatttcatattcttccattttttgtccctcattccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggac 23383665  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||| | |||||||| | ||||| |||||||||||| ||||||| |||||||||||     
T  23383666 caaaagtgaaggaatttgaaattacaaggaccaaaagtgggaggaatctaaaattacaaggacgtagtttatgcagattctgttgacttgatgaaaggag 23383765  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||| ||||| |||| ||||||||||    
T  23383766 ggaccaaaggtggaagaatatgaaattaca 23383795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 48672345 - 48672574
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| ||  ||| ||||||| |||||| |||||||| ||||||||||||||| || |||||||||||||||||||  |  ||||||||||||     
T  48672345 gatttagatttcgtctctgtaatttcagattcttccacttttgatccctcattccaccacgtcagcagaatctgcatacatggcatgtaaaatgagggat 48672444  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| | |||||||| |||||||||||| | ||||||||||||||     
T  48672445 caaaagtggaggaatctgaaattacaaggaccaaaagtgggaggaatttgaaattacaaggacgtaattgatgcagattttgctaacgtgatgaaaggag 48672544  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||||| |||||||||||||||    
T  48672545 ggaccaaaagtggaagaatctgaaattaca 48672574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 28 - 254
Target Start/End: Original strand, 44816901 - 44817128
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||| ||||| || |||| ||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||  || |||||||||||||    
T  44816901 gattttgattttgtccctgtaatttcagattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggac 44817000  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||| ||||| |||| | |||||||||||||||||| | ||||| |||||||| ||     
T  44817001 caaaagtggaggaatctgaaattacaaggaccaaaagtggaaggaatttgaaactacatgtacgtaatttatgcagattctattgacttgatgaaaagag 44817100  T
Q  227 tgaccaaaagtggaggaatctgaaatta 254  Q
     ||||||||||| | |||| ||||||||    
T  44817101 ggaccaaaagtgaaagaatatgaaatta 44817128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 10409686 - 10409457
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| ||  ||| ||||| | |||||| |||||||| ||||||||||||||| || |||||||||||||||||||  |  ||||||||||||     
T  10409686 gatttagattttgtctctgtaattttagattcttccacttttgatccctcattccaccacgttagcagaatctgcatacatggcatgtaaaatgagggat 10409587  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||| | |||||||| |||||||||||| ||| |||||||||| |     
T  10409586 caaaagtggaggaatctgaaattacaaggaccaaaagtaggaggaatctgaaattacaaggacgtaattgatgcagattttgctgaagtgatgaaagaag 10409487  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||| |||||| || |||||||||||||||    
T  10409486 ggactaaaagtagaagaatctgaaattaca 10409457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 28218245 - 28218458
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| ||||||| |||||| |||||||||||||||||||||||| || ||||||||||||||                |||||||    
T  28218245 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcattccaccacgtcagcagaatctgcat----------------gagggac 28218328  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||| ||| |||||||||| |||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||     
T  28218329 caaaagtggagtaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggacgtaattgatgcagattttgttgacgtgatgaaaggag 28218428  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||||| |||||||||||||||    
T  28218429 ggaccaaaagtggaagaatctgaaattaca 28218458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 48 - 256
Target Start/End: Original strand, 31851325 - 31851534
Alignment:
Q  48 aatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaa 147  Q
    ||||||||||| || |||||||| || ||| || ||||| || |||||||||||||||||||  || |||||||||||||||||||||||| ||||||||    
T  31851325 aatttcatatttttccacttttgatctctcttttcaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggagaaatatgaa 31851424  T
Q  148 attacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggaggaatc 246  Q
    |||||| ||| ||||| || ||||||| |||||||||||| |||||||||||||| ||| || ||| ||||||||||||  ||||||||||||| ||||     
T  31851425 attacagggatcaaaattgagaggaatctgaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagagaccaaaagtggaagaata 31851524  T
Q  247 tgaaattaca 256  Q
    ||||||||||    
T  31851525 tgaaattaca 31851534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 48 - 256
Target Start/End: Original strand, 7658057 - 7658264
Alignment:
Q  48 aatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaa 147  Q
    ||||||| |||||| |||||||||||| || || || || || |||| ||||||||| ||||  || ||||||||||||| |||||| || |||| ||||    
T  7658057 aatttcaaattcttacacttttggtccatcctttcatcacgtcagcaaaatctgcat-catgtcacgtaaaatgagggactaaaagtagatgaatctgaa 7658155  T
Q  148 attacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggaggaatc 246  Q
    |||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||  ||||||||||||| |||||    
T  7658156 atta-aaggaccaaaagtgggaggaatatgaaattacagggacataatttatgcagattttgctgacgtgatgaaaggagagaccaaaagtggaagaatc 7658254  T
Q  247 tgaaattaca 256  Q
    | ||||||||    
T  7658255 ttaaattaca 7658264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 33162827 - 33162651
Alignment:
Q  48 aatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaa 147  Q
    ||||||| |||||| ||||||| |||  ||||| ||||| || |||||||||||||||||||  |||||||||||||||||||||||| || ||| ||||    
T  33162827 aatttcaaattcttccacttttagtctttcatttcaccacgtcagcagaatctgcatacatggcacataaaatgagggaccaaaagtgaagtaatctgaa 33162728  T
Q  148 attacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaag 224  Q
    |||||| ||||||||||||| |||||| |||||||||| ||||||||||||| |||||| |  ||||||||||||||    
T  33162727 attacacggaccaaaagtggaaggaatttgaaattacaagaacgtaatttatacagattctactgacgtgatgaaag 33162651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 56 - 254
Target Start/End: Original strand, 1250300 - 1250499
Alignment:
Q  56 attctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaaattacaag 155  Q
    |||||| ||||||||||| |||||||||||| || ||| |||||||||||||||  |  |||||||| |||  ||||||||||||||||| |||||||      
T  1250300 attcttccacttttggtctctcattccaccacgtcagctgaatctgcatacatgtcatgtaaaatgaaggattaaaagtggaggaatatggaattacagt 1250399  T
Q  156 gaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggaggaatctgaaatta 254  Q
    |||||||| | |||||||| |||||||||||| |||||||||||||||||| |  ||||||||||||||||  ||||||||||||| |||| ||||||||    
T  1250400 gaccaaaaataggaggaatttgaaattacagggacgtaatttatgcagattcttctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaatta 1250499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 6466077 - 6465937
Alignment:
Q  117 aaatgagggaccaaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgt 216  Q
    |||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||| |||||||||||| || ||||||||||||||| |  ||||||    
T  6466077 aaatgagggaccaaaagtggagtaatatgaaattacagggatcaaaagtgggaggaatttgaaattacagggacataatttatgcagattcttctgacgt 6465978  T
Q  217 gatgaaagga-tgaccaaaagtggaggaatctgaaattaca 256  Q
    ||||||||||  ||||||||||||| |||||||||||||||    
T  6465977 gatgaaaggagggaccaaaagtggaagaatctgaaattaca 6465937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 28 - 187
Target Start/End: Complemental strand, 24195108 - 24194944
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatga-----aacataaaatga 122  Q
    ||||||||||| || | || |||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||     || || ||||||    
T  24195108 gatttagattttgtccttgtaatttcatattcttccacttttggtccctcattccatcacgtaagcagaatctgcatacatgatacgtaaaatgaaatga 24195009  T
Q  123 gggaccaaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacagg 187  Q
    |||||||||||||||||||| |||||||| | |||||||||||| ||||||| ||||||||||||    
T  24195008 gggaccaaaagtggaggaatctgaaattatagggaccaaaagtgagaggaatctgaaattacagg 24194944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 28 - 158
Target Start/End: Original strand, 25772429 - 25772559
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || | || |||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||  || |||||||||||||    
T  25772429 gatttagattttgtccttgtaatttcatattcttccacttttgttccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggac 25772528  T
Q  128 caaaagtggaggaatatgaaattacaaggac 158  Q
    ||||||||||||||| |||||||||||||||    
T  25772529 caaaagtggaggaatctgaaattacaaggac 25772559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 28 - 158
Target Start/End: Original strand, 48648327 - 48648457
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| ||||||| ||| ||||| ||||||||||||||||||||| ||||| ||||||||||||||||  || ||||| |||||||    
T  48648327 gatttagattttgtccctgtaatttcagattttttcatttttggtccctcattccaccacgtaagtagaatctgcatacatggcacgtaaaaggagggac 48648426  T
Q  128 caaaagtggaggaatatgaaattacaaggac 158  Q
    ||||| ||||||||| |||||||||| ||||    
T  48648427 caaaattggaggaatctgaaattacagggac 48648457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 48648434 - 48648525
Alignment:
Q  167 ggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggaggaatctgaaattacat 257  Q
    |||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||  ||||| ||||||| |||||| |||||||||    
T  48648434 ggaggaatctgaaattacagggacgtaatttatgcagattctgttgacgtgatgaaaggagggaccagaagtggaagaatctaaaattacat 48648525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 256
Target Start/End: Original strand, 25772525 - 25772626
Alignment:
Q  155 ggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggaggaatctgaaatt 253  Q
    ||||||||||||| |||||| |||||||||| | |||||||||||||||||| ||||||| |||||||||||  |||||||||| || ||||||||||||    
T  25772525 ggaccaaaagtgg-aggaatctgaaattacaaggacgtaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaatt 25772623  T
Q  254 aca 256  Q
    |||    
T  25772624 aca 25772626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 104
Target Start/End: Original strand, 16995266 - 16995341
Alignment:
Q  29 atttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcat 104  Q
    |||||||||| || |||| ||||||| |||||| ||||||||||||| |||||||||| || ||||||||||||||    
T  16995266 atttagattttgtccctgtaatttcagattcttccacttttggtcccacattccaccacgtcagcagaatctgcat 16995341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 257
Target Start/End: Complemental strand, 7658113 - 7658053
Alignment:
Q  198 atgcagattttgttgacgtgatgaaaggat-gaccaaaagtggaggaatctgaaattacat 257  Q
    |||||||||||| ||||||||||||||||| ||||||||||| | |||| |||||||||||    
T  7658113 atgcagattttgctgacgtgatgaaaggatggaccaaaagtgtaagaatttgaaattacat 7658053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 24195056 - 24195096
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  24195056 aatgagggaccaaaagtggaagaatatgaaattacaaggac 24195096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 38880035 - 38879959
Alignment:
Q  29 atttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    |||||||||| || |||| ||||||| |||||| ||||||||||||||| || ||||| || | |||||||||||||    
T  38880035 atttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcaccaagtcaacagaatctgcata 38879959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 1250518 - 1250441
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    ||||||||||| || |||  |||||||||||||| ||||||||||||||| || || || || || ||||||||||||    
T  1250518 gatttagattttgtccctttaatttcatattcttccacttttggtccctcctttcatcacgtcagaagaatctgcata 1250441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 20963805 - 20963760
Alignment:
Q  29 atttagatttagtacctgcaatttcatattctttcacttttggtcc 74  Q
    ||||||||||||| |||| ||||||| |||||||||||||||||||    
T  20963805 atttagatttagtccctgtaatttcagattctttcacttttggtcc 20963760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 23383812 - 23383735
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    ||||||||||| || |||| |||||||||||||| ||| ||||||||||| || || || || | |||||||||||||    
T  23383812 gatttagattttgtccctgtaatttcatattcttccacctttggtccctcctttcatcaagtcaacagaatctgcata 23383735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 12006852 - 12006776
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcat 104  Q
    ||||||||||| || |||| ||||||| |||||| ||||||||||||||| || || || || |||| |||||||||    
T  12006852 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcacgtcagcaaaatctgcat 12006776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 23704921 - 23704961
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  23704921 aatgagggaccaaaagtggaagaatatgaaattacagggac 23704961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 25772481 - 25772441
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  25772481 aatgagggaacaaaagtggaagaatatgaaattacaaggac 25772441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 38879842 - 38879802
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  38879842 aatgagggaccaaaagtggaagaatatgaaattacagggac 38879802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 41600270 - 41600194
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcat 104  Q
    ||||||||||| || |||| ||||||| |||||| ||||||||||||||| || || || || |||| |||||||||    
T  41600270 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcacgtcagcaaaatctgcat 41600194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 25772643 - 25772566
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    ||||||||||| || |||| ||||||| ||||||  |||||||||||||| || || || || | |||||||||||||    
T  25772643 gatttagattttgtccctgtaatttcagattcttctacttttggtccctcctttcatcaagtcaacagaatctgcata 25772566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 28218475 - 28218426
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctc 77  Q
    ||||||||||| || |||| ||||||| |||||| |||||||||||||||    
T  28218475 gatttagattttgtccctgtaatttcagattcttccacttttggtccctc 28218426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 77
Target Start/End: Complemental strand, 44817127 - 44817098
Alignment:
Q  48 aatttcatattctttcacttttggtccctc 77  Q
    ||||||||||||||||||||||||||||||    
T  44817127 aatttcatattctttcacttttggtccctc 44817098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 20419654 - 20419614
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    ||||||||||||||| |||| ||||||||||||||| ||||    
T  20419654 aatgagggaccaaaaatggaagaatatgaaattacagggac 20419614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 80
Target Start/End: Complemental strand, 20963683 - 20963651
Alignment:
Q  48 aatttcatattctttcacttttggtccctcatt 80  Q
    |||||||||||||| ||||||||||||||||||    
T  20963683 aatttcatattcttccacttttggtccctcatt 20963651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 28218297 - 28218257
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  28218297 aatgagggaccaaaagtggaagaatctgaaattacagggac 28218257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 44816953 - 44816913
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  44816953 aatgagggaccaaaagtggaagaatctgaaattacagggac 44816913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 228 - 256
Target Start/End: Original strand, 44816998 - 44817026
Alignment:
Q  228 gaccaaaagtggaggaatctgaaattaca 256  Q
    |||||||||||||||||||||||||||||    
T  44816998 gaccaaaagtggaggaatctgaaattaca 44817026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 48672591 - 48672515
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcat 104  Q
    |||||||||||  | |||| ||||||| |||||| ||||||||||||||| || || || || |||| |||||||||    
T  48672591 gatttagattttatccctgtaatttcagattcttccacttttggtccctcctttcatcacgttagcaaaatctgcat 48672515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 154; Significance: 9e-82; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 21633208 - 21632979
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| ||||||| |||||| |||||||||||||||||||||||| ||||| ||||||||||||||||  ||||||||||||||||    
T  21633208 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcattccaccacgtaagaagaatctgcatacatggcacataaaatgagggac 21633109  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||| |||||||||||     
T  21633108 caaaagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgttgacttgatgaaaggag 21633009  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||| | |||||||||||||||    
T  21633008 ggaccaaaagtgaaagaatctgaaattaca 21632979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 28 - 257
Target Start/End: Complemental strand, 16722303 - 16722073
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||    
T  16722303 gatttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggac 16722204  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| |||||||||| |||||| ||||||||||||| |||||||||||  || ||||||||||||||| ||||||| ||||||||| |     
T  16722203 caaaagtggaggaatctgaaattacagggaccagaagtgggaggaatctgaaattacagtgacataatttatgcagattctgttgacttgatgaaagaag 16722104  T
Q  227 tgaccaaaagtggaggaatctgaaattacat 257  Q
     ||||||||||||| ||||||||||||||||    
T  16722103 ggaccaaaagtggaagaatctgaaattacat 16722073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 19112831 - 19113060
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| |||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||  || |||||||||||||    
T  19112831 gatttagattttgtccctggaatttcatattcttccacttttggtcccttattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggac 19112930  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||| ||| |||||||||| |||||||||||||||||||| |||||||||| | |||||||||||||||||| ||||||| |||||||||||     
T  19112931 caaaagtggagaaatctgaaattacagggaccaaaagtgggaggaatctgaaattacaaggacgtaatttatgcagattctgttgacttgatgaaaggag 19113030  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     |||||||||| || |||||||||||||||    
T  19113031 ggaccaaaagtagaagaatctgaaattaca 19113060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 45003808 - 45003579
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    |||||||||||||| |||  |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||  |  ||||||||||||     
T  45003808 gatttagatttagtccctataatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcatgtaaaatgagggat 45003709  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||| | ||||||||||| |||||| |||||||||||||||||||     
T  45003708 caaaagtggaggaatatgaaattacagggaacaaaagtgggaggaatctgaaattacaaggacgtaatttatacagattctgttgacgtgatgaaaggag 45003609  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||| ||||||||| |||||||||||||||    
T  45003608 ggacaaaaagtggaagaatctgaaattaca 45003579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 9267041 - 9267270
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| |||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||   || |||||||||||||    
T  9267041 gatttagattttgtccctgtaatttcatattcttccacttttggtccctcattccagcacgtaagcagaatctgcatacattgtacgtaaaatgagggac 9267140  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| | || ||||||||||||||| ||||||| |||||||||||     
T  9267141 caaaagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacaaggacttaatttatgcagattctgttgacttgatgaaaggag 9267240  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     |||||||||| || |||||||| ||||||    
T  9267241 ggaccaaaagtagaagaatctgatattaca 9267270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 45970227 - 45969998
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    |||||| |||| || |||| ||||||| |||||| |||||||||| || |||||||||| |||||||||||| |||||||||| || |||||||||||||    
T  45970227 gatttaaattttgtccctgtaatttcagattcttccacttttggttccccattccaccacgtaagcagaatccgcatacatgacacgtaaaatgagggac 45970128  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||| ||| |||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||| |||||||||||     
T  45970127 caaaagtggagaaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgttgacttgatgaaaggag 45970028  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||| | |||||||||||||||    
T  45970027 agaccaaaagtgaaagaatctgaaattaca 45969998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 29 - 256
Target Start/End: Original strand, 30500108 - 30500336
Alignment:
Q  29 atttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggacc 128  Q
    |||||||||| || |||| |||||||||||||| |||||||||||||| ||||||||| || |||||||||||||||||||  || ||||||||||||||    
T  30500108 atttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggacc 30500207  T
Q  129 aaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-t 227  Q
    ||||||| |||||| |||||||||| |||||||||||||||||||| |||||||||||| | |||||||||| |||||||| ||||||||||||||||      
T  30500208 aaaagtgaaggaatttgaaattacatggaccaaaagtgggaggaatctgaaattacagggatgtaatttatgtagattttgctgacgtgatgaaaggagg 30500307  T
Q  228 gaccaaaagtggaggaatctgaaattaca 256  Q
    |||||||||||||  ||| ||||||||||    
T  30500308 gaccaaaagtggaacaatatgaaattaca 30500336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 20853762 - 20853991
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||  |||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||  || |||||||||||||    
T  20853762 gatttagattttgtccctataatttcatattcttccacttttggtccctcattccaccacgtaagtagaatctgcatacatggcacgtaaaatgagggac 20853861  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| | ||||||||  ||||| ||||||||||||| |||||||||||  || ||||||||||||||| ||||||| |||||||||||     
T  20853862 caaaagtggaggaatctaaaattacagagaccagaagtgggaggaatctgaaattacagtgacataatttatgcagattatgttgacttgatgaaaggag 20853961  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||||| |||||||||||||||    
T  20853962 ggaccaaaagtggaagaatctgaaattaca 20853991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 30 - 255
Target Start/End: Original strand, 35995746 - 35995972
Alignment:
Q  30 tttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggacca 129  Q
    ||||||||| || |||| ||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||    
T  35995746 tttagattttgtccctgtaatttcagattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggacca 35995845  T
Q  130 aaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tg 228  Q
    |||||||||||| ||||||||||| |||| ||||||||||||||| | ||  |||| | |||||||||||||||||| ||  ||||||||||||| |  |    
T  35995846 aaagtggaggaacatgaaattacagggacaaaaagtgggaggaatctaaatatacaaggacgtaatttatgcagattctgcggacgtgatgaaagaaggg 35995945  T
Q  229 accaaaagtggaggaatctgaaattac 255  Q
    |||||||||||| ||||||||||||||    
T  35995946 accaaaagtggaagaatctgaaattac 35995972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 14171652 - 14171881
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| ||||||| |||||| |||||||| ||||||||||||||| || |||||||||||||||||||  || ||||||||||||     
T  14171652 gatttagattttgtccctgtaatttcaaattcttccacttttgatccctcattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggat 14171751  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagg-a 226  Q
    ||||| ||||||||| |||||||||| |||||||||||||||||||| |||||||||| |  ||||||| |||||||||||| ||||||||||||||| |    
T  14171752 caaaaatggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacaaggtcgtaattgatgcagattttgctgacgtgatgaaaggaa 14171851  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||||| ||||| |||||||||    
T  14171852 ggaccaaaagtggaagaatcagaaattaca 14171881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 48 - 256
Target Start/End: Complemental strand, 49986820 - 49986611
Alignment:
Q  48 aatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaa 147  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||  || |||||||||||||||||||||||||||| ||||    
T  49986820 aatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaa 49986721  T
Q  148 attacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggaggaatc 246  Q
    |||||| |||||||||||| ||||||| |||||||||| | |||||||||||||||||| | || |  |||||||||||  |||||||||| || |||||    
T  49986720 attacagggaccaaaagtgagaggaatctgaaattacaaggacgtaatttatgcagattctattaaattgatgaaaggagagaccaaaagtagaagaatc 49986621  T
Q  247 tgaaattaca 256  Q
    ||||||||||    
T  49986620 tgaaattaca 49986611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 52552758 - 52552983
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| ||||||| |||||| |||||||| ||||| |||||||||||| |||||||||||||||||||| || |||||||||||||    
T  52552758 gatttagattttgtccctgtaatttcagattcttccacttttgatcccttattccaccatgtcagcagaatctgcatacatgacacgtaaaatgagggac 52552857  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    |||||||| |||||| |||||||||| |||||||    ||||||||| |||||||||||| |||||||||||||||||| || ||||||||||||||||     
T  52552858 caaaagtgaaggaatttgaaattacagggaccaa----gggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggag 52552953  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||||| |||| ||||||||||    
T  52552954 ggaccaaaagtggaagaatatgaaattaca 52552983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 28 - 223
Target Start/End: Complemental strand, 15328772 - 15328577
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| ||||||| ||| || |||||||||||||| ||||||||| || ||||||||||||||| |||| || ||||||||| |||    
T  15328772 gatttagattttgtccctgtaatttcagatttttccacttttggtcccttattccaccacgtcagcagaatctgcatatatgacacgtaaaatgagagac 15328673  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaa 223  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||    
T  15328672 caaaagtggaggaatttgaaattacagggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgttgacgtgatgaaa 15328577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 43 - 256
Target Start/End: Original strand, 17465449 - 17465662
Alignment:
Q  43 cctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaat 142  Q
    |||| ||||||| |||||| || ||||| || |||||||||||| ||||||||||||||||||||||  || ||||||||||||||||||||||||||||    
T  17465449 cctgtaatttcagattcttccatttttgatctctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaat 17465548  T
Q  143 atgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggag 241  Q
    |||||||||| ||||||||||||||||||||| |||||||||||  |||||||||||| | |||||||||||||||||||||||  ||||||||||| |     
T  17465549 atgaaattac-aggaccaaaagtgggaggaatctgaaattacagagacgtaatttatgtaaattttgttgacgtgatgaaaggagggaccaaaagtgaaa 17465647  T
Q  242 gaatctgaaattaca 256  Q
    |||||| || |||||    
T  17465648 gaatctaaagttaca 17465662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 14162183 - 14161954
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || | || ||||||| |||||| |||||||||||||| ||||||||| || |||| ||| ||||||||||  || |||||||||||||    
T  14162183 gatttagattttgtccttgtaatttcagattcttccacttttggtcccttattccaccacgtcagcaaaatttgcatacatggcacgtaaaatgagggac 14162084  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||| ||||||||| |||||||||| ||||||||| | |||||||| |||||||||||| |||||||||||||||||| || ||||||||||||||||     
T  14162083 caaaaatggaggaatttgaaattacagggaccaaaattaggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggag 14161984  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||||| |||| ||||||||||    
T  14161983 ggaccaaaagtggaagaatatgaaattaca 14161954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 33372716 - 33372489
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| ||||||| |||||| |||||||| |||| |||||||||| || |||||||||||||||| ||| || ||||||||||||     
T  33372716 gatttagattttgtccctgtaatttcagattcttccacttttgatccc-cattccaccacgtcagcagaatctgcatac-tgacacgtaaaatgagggat 33372619  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||| | || ||||| |||||||||||| ||||||||||||||||     
T  33372618 caaaagtggaggaatatgaaattacagagaccaaaagtgggaggaatctgaaattacaaggacttaattgatgcagattttgctgacgtgatgaaaggag 33372519  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     |||||||||||||  ||||||||||||||    
T  33372518 ggaccaaaagtggaataatctgaaattaca 33372489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 29 - 256
Target Start/End: Original strand, 14262103 - 14262331
Alignment:
Q  29 atttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggacc 128  Q
    |||||||||| || |||| ||||||| |||||| |||||||||||||| |||||||||  | |||||||||||||||||||  || ||||||||||||||    
T  14262103 atttagattttgtccctgtaatttcagattcttccacttttggtcccttattccaccacatcagcagaatctgcatacatggcacgtaaaatgagggacc 14262202  T
Q  129 aaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-t 227  Q
    |||||||||||||| |||||||||| ||| ||||||||| |||||| | |||||||||| |||||||||||||||||| || ||||||||||||||||      
T  14262203 aaaagtggaggaatttgaaattacagggatcaaaagtggaaggaatctaaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagg 14262302  T
Q  228 gaccaaaagtggaggaatctgaaattaca 256  Q
    ||| |||||||||  ||| ||||||||||    
T  14262303 gactaaaagtggaacaatatgaaattaca 14262331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 5800917 - 5800688
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || | || |||||||||||||| |||||||||||||| |||||||||  | |||| ||| ||||||||||  |  |||||||||||||    
T  5800917 gatttagattttgtccttgtaatttcatattcttccacttttggtcccttattccaccacttcagcaaaatttgcatacatggcatgtaaaatgagggac 5800818  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||| ||||||||| |||||||||| ||||||||| | |||||||| |||||||||||| |||||||||||||||||| || ||||||||||||||||     
T  5800817 caaaaatggaggaatttgaaattacagggaccaaaactaggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggag 5800718  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     |||||||| |||| |||| ||||||||||    
T  5800717 ggaccaaaaatggaagaatatgaaattaca 5800688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 29 - 256
Target Start/End: Complemental strand, 43572702 - 43572472
Alignment:
Q  29 atttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggacc 128  Q
    |||||||||  || |||| ||||||| |||||| |||||||||||||||||| ||||| || |||||||||||| || |||| || ||||||||||||||    
T  43572702 atttagattctgtccctgtaatttcagattcttccacttttggtccctcatttcaccacgtcagcagaatctgcgtaaatgacacgtaaaatgagggacc 43572603  T
Q  129 aaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgac---gtgatgaaagg 225  Q
    |||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||| |||||| || |||||||| || ||||    ||||||||||    
T  43572602 aaaagtggagtaatttgaaattacagggaccaaaagtgggaggaatatgaaattacagggacgtaa-ttgtgcagattctgctgacttgatgatgaaagg 43572504  T
Q  226 a-tgaccaaaagtggaggaatctgaaattaca 256  Q
    |  ||||||||||||| |||||||||||||||    
T  43572503 agggaccaaaagtggaagaatctgaaattaca 43572472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 48 - 256
Target Start/End: Original strand, 47575359 - 47575567
Alignment:
Q  48 aatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaa 147  Q
    ||||| ||||||||||||||||||||||| ||||||||| |  |||||||||||||||||||  || |||||||||||| ||||||||||||||| ||||    
T  47575359 aattttatattctttcacttttggtccct-attccaccacggcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatttgaa 47575457  T
Q  148 attacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggaggaatc 246  Q
    |||||| |||| |||| |||||||||| |||||||||||| |  ||||||||||||||| || ||||||||||||||||  |||||||||| ||  ||||    
T  47575458 attacagggacaaaaaatgggaggaatttgaaattacagggatataatttatgcagattctgctgacgtgatgaaaggagagaccaaaagttgaaaaatc 47575557  T
Q  247 tgaaattaca 256  Q
    ||||||||||    
T  47575558 tgaaattaca 47575567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 28 - 252
Target Start/End: Original strand, 4204774 - 4204999
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||  || |||| ||||||| |||||| |||||||||||||||||| ||||| || |||||||||||||||||||  || |||||||||||||    
T  4204774 gatttagattatgtccctgtaatttcagattcttccacttttggtccctcatttcaccacgtcagcagaatctgcatacatggcacgtaaaatgagggac 4204873  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||| ||||||||||||||  |||||| |||||||||||| |||||||| | | | |||||||||||||||| |  ||||||||| ||| ||     
T  4204874 caaaagtggagtaatatgaaattacagagaccaatagtgggaggaatctgaaattatatggatgtaatttatgcagattctactgacgtgataaaaagag 4204973  T
Q  227 tgaccaaaagtggaggaatctgaaat 252  Q
     || |||||||||| |||||||||||    
T  4204974 ggatcaaaagtggaagaatctgaaat 4204999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 29 - 254
Target Start/End: Complemental strand, 38283861 - 38283635
Alignment:
Q  29 atttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggacc 128  Q
    |||||||||| || |||  ||||||| |||||| |||||||| ||||| ||| || || || |||||||||||||||||||  || ||||||||||||||    
T  38283861 atttagattttgtccctataatttcagattcttccacttttgatcccttatttcatcacgtcagcagaatctgcatacatggcacgtaaaatgagggacc 38283762  T
Q  129 aaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-t 227  Q
    |||||||||||||| |||||||||| |||| ||||||||||||||| | |||||||||| |||||| ||||| ||||| || ||||||||||||||||      
T  38283761 aaaagtggaggaatttgaaattacacggacaaaaagtgggaggaatcttaaattacagggacgtaacttatgtagattctgctgacgtgatgaaaggagg 38283662  T
Q  228 gaccaaaagtggaggaatctgaaatta 254  Q
    || ||||||||||  ||| ||||||||    
T  38283661 gatcaaaagtggaacaatatgaaatta 38283635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 11003943 - 11003815
Alignment:
Q  129 aaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaaggat- 227  Q
    |||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||| |||||||| ||||| ||||||||||| ||||||||||||     
T  11003943 aaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggacgtaattgatgcatattttgttgacttgatgaaaggatg 11003844  T
Q  228 gaccaaaagtggaggaatctgaaattaca 256  Q
    ||||||||||||| |||||||||||||||    
T  11003843 gaccaaaagtggaagaatctgaaattaca 11003815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 256
Target Start/End: Original strand, 17649224 - 17649305
Alignment:
Q  176 tgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggaggaatctgaaattaca 256  Q
    |||||||||||| |||||||||||||||||| ||||||| |||| ||||||  ||||||| |||||  ||||||||||||||    
T  17649224 tgaaattacagggacgtaatttatgcagattctgttgacttgataaaaggagagaccaaatgtggaataatctgaaattaca 17649305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 14161937 - 14162014
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    ||||||||||  || |||| |||||||||||||| ||||||||||||||| || || || || |||||||||||||||    
T  14161937 gatttagattatgtccctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcata 14162014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 52553000 - 52552923
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    ||||||||||| ||  ||| |||||||||||||| ||||||||||||||| || || || || |||||||||||||||    
T  52553000 gatttagattttgtctctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcata 52552923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 5800671 - 5800748
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    ||||||||||  || |||| |||||||||||||| || |||||||||||| || || || || |||||||||||||||    
T  5800671 gatttagattatgtccctgtaatttcatattcttccatttttggtccctcctttcatcacgtcagcagaatctgcata 5800748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 14262348 - 14262271
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    ||||||||||| || |||| ||||||||||| || ||||||| ||||||| || || || || |||||||||||||||    
T  14262348 gatttagattttgtccctgtaatttcatattgttccacttttagtccctcctttcatcacgtcagcagaatctgcata 14262271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 45969981 - 45970058
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    ||||||||||| || |||| ||||||| |||||||||||||||||| ||| || || || || | |||||||||||||    
T  45969981 gatttagattttgtccctgtaatttcagattctttcacttttggtctctcctttcatcaagtcaacagaatctgcata 45970058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 155
Target Start/End: Original strand, 49986788 - 49986825
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaag 155  Q
    |||||||||||||||||||| |||||||||||||||||    
T  49986788 aatgagggaccaaaagtggaagaatatgaaattacaag 49986825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 158
Target Start/End: Original strand, 5800869 - 5800905
Alignment:
Q  122 agggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||| ||||||||||||||||||||    
T  5800869 agggaccaaaagtggaagaatatgaaattacaaggac 5800905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 9267093 - 9267053
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  9267093 aatgagggaccaaaagtggaagaatatgaaattacagggac 9267053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 45058803 - 45058731
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatct 100  Q
    ||||||||||| ||  ||| ||||||| |||||| || ||||| ||||| |||||||||||||||| ||||||    
T  45058803 gatttagattttgtctctgtaatttcagattcttccatttttgatcccttattccaccatgtaagccgaatct 45058731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 21632977 - 21633039
Alignment:
Q  43 cctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    |||| ||||||| |||||||||||||||||||||| || || || || | |||||||||||||    
T  21632977 cctgtaatttcagattctttcacttttggtccctcctttcatcaagtcaacagaatctgcata 21633039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 4204827 - 4204786
Alignment:
Q  117 aaatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    ||||||||||||||||||||| |||| |||||||||| ||||    
T  4204827 aaatgagggaccaaaagtggaagaatctgaaattacagggac 4204786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 158
Target Start/End: Complemental strand, 14161986 - 14161949
Alignment:
Q  121 gagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  14161986 gagggaccaaaagtggaagaatatgaaattacagggac 14161949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 118 - 151
Target Start/End: Complemental strand, 20853814 - 20853781
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaatta 151  Q
    |||||||||||||||||||| |||||||||||||    
T  20853814 aatgagggaccaaaagtggaagaatatgaaatta 20853781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 20854008 - 20853959
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctc 77  Q
    ||||||||||| || |||| ||||||| |||||| |||||||||||||||    
T  20854008 gatttagattttgtccctgtaatttcagattcttccacttttggtccctc 20853959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 43572650 - 43572691
Alignment:
Q  117 aaatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    ||||||||||||||||||||| |||| |||||||||| ||||    
T  43572650 aaatgagggaccaaaagtggaagaatctgaaattacagggac 43572691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 118 - 151
Target Start/End: Original strand, 45003756 - 45003789
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaatta 151  Q
    |||||||||||||||||||| |||||||||||||    
T  45003756 aatgagggaccaaaagtggaagaatatgaaatta 45003789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 256
Target Start/End: Complemental strand, 4204851 - 4204791
Alignment:
Q  197 tatgcagattttgttgacgtgatgaaaggatg-accaaaagtggaggaatctgaaattaca 256  Q
    |||||||||| || ||||||| ||||| || | |||||||||||| |||||||||||||||    
T  4204851 tatgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattaca 4204791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Original strand, 14162135 - 14162171
Alignment:
Q  122 agggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||| |||| |||||||||||||||    
T  14162135 agggaccaaaagtggaagaatctgaaattacaaggac 14162171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Original strand, 16722255 - 16722291
Alignment:
Q  122 agggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  16722255 agggaccaaaagtggaagaatatgaaattacagggac 16722291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 21633156 - 21633196
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  21633156 aatgagggaccaaaagtggaagaatctgaaattacagggac 21633196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Complemental strand, 30500155 - 30500119
Alignment:
Q  122 agggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  30500155 agggaccaaaagtggaagaatatgaaattacagggac 30500119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 30500352 - 30500304
Alignment:
Q  29 atttagatttagtacctgcaatttcatattctttcacttttggtccctc 77  Q
    |||||||||| || |||| ||||||||||| || |||||||||||||||    
T  30500352 atttagattttgtccctgtaatttcatattgttccacttttggtccctc 30500304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 33372472 - 33372548
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcat 104  Q
    ||||||||||| || |||| ||||||| ||| || ||||||||||||||| || || || || |||| |||||||||    
T  33372472 gatttagattttgtccctgtaatttcagattattccacttttggtccctcctttcatcacgtcagcaaaatctgcat 33372548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 35995796 - 35995756
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  35995796 aatgagggaccaaaagtggaagaatctgaaattacagggac 35995756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 43572456 - 43572504
Alignment:
Q  29 atttagatttagtacctgcaatttcatattctttcacttttggtccctc 77  Q
    |||||||||| || |||| ||||||| |||||| |||||||||||||||    
T  43572456 atttagattttgtccctgtaatttcagattcttccacttttggtccctc 43572504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 150; Significance: 2e-79; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 9516676 - 9516905
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || | || |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||    
T  9516676 gatttagattttgtccttgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatgatacgtaaaatgagggac 9516775  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||| | |||||||||||| ||||||||||||| |||||||||||     
T  9516776 caaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacaaggacgtaatttatgtagattttgttgacttgatgaaaggag 9516875  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     |||||||||| || |||||||||||||||    
T  9516876 ggaccaaaagtagaagaatctgaaattaca 9516905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 37012773 - 37013002
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| ||||||| |||||| |||||||||||||| ||||||||| || |||||||||||||||||||  || |||||||||||||    
T  37012773 gatttagattttgtccctgtaatttcagattcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggac 37012872  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||     
T  37012873 caaaagtggaggaatttgaaattacaaggaccaaaagtaggaagaatatgaaattacagggacgtaatttatgcagattttgctgacgtgatgaaaggag 37012972  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
    |||||||||||||| |||| ||||||||||    
T  37012973 tgaccaaaagtggaagaatatgaaattaca 37013002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 38574034 - 38574263
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| |||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||  |  |||||||||||||    
T  38574034 gatttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtcagcagaatctgcatacatggcatgtaaaatgagggac 38574133  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||| ||| |||| |||||||||||||||||||||||||||||     
T  38574134 caaaagtggaggaatatgaaattacagagaccaaaagtgggaggaatctgaaattacagggacgcaattgatgcagattttgttgacgtgatgaaaggag 38574233  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||||| |||| ||||||||||    
T  38574234 ggaccaaaagtggaagaatatgaaattaca 38574263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 32 - 256
Target Start/End: Complemental strand, 7819322 - 7819097
Alignment:
Q  32 tagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaa 131  Q
    ||||||| || |||| ||| ||| |||||| |||||||||||||||||||||||| || |||||||||||||||||||  || |||||||||||||||||    
T  7819322 tagattttgtccctgtaatgtcagattcttccacttttggtccctcattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaa 7819223  T
Q  132 agtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaaggatg-ac 230  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||| | |||||||| |||||||||||  | |||||||||||||| | ||    
T  7819222 agtggaggaatatgaaattacatggaccaaaagtgggaggaatctgaaattacatggacgtaattgatgcagattttactaacgtgatgaaaggaggaac 7819123  T
Q  231 caaaagtggaggaatctgaaattaca 256  Q
    |||||||||| |||||||||||||||    
T  7819122 caaaagtggaagaatctgaaattaca 7819097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 28 - 254
Target Start/End: Complemental strand, 9397011 - 9396784
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| ||||||| |||||| ||||||||| || |||||||| || || |||||||||||||||||||| || |||||||||||||    
T  9397011 gatttagattttgtccctgtaatttcagattcttccacttttggaccatcattccaacacgtcagcagaatctgcatacatgacacgtaaaatgagggac 9396912  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||| |||||||||||||||||| || ||||||||||||||||     
T  9396911 caaaagtggaggaatatgaaattacagggatcaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggag 9396812  T
Q  227 tgaccaaaagtggaggaatctgaaatta 254  Q
     |||||||||||||  ||| ||||||||    
T  9396811 ggaccaaaagtggaaaaatttgaaatta 9396784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 32 - 256
Target Start/End: Original strand, 46046494 - 46046719
Alignment:
Q  32 tagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaa 131  Q
    ||||||| || |||| |||||||||||||| |||||||| ||||||||||||||| || || ||||||||||||||||  || |||||||||||| ||||    
T  46046494 tagattttgtccctgtaatttcatattcttccacttttgatccctcattccaccacgttagtagaatctgcatacatggcacgtaaaatgagggatcaaa 46046593  T
Q  132 agtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgac 230  Q
    ||||||||||| |||||||||| |||||||||||||||||||| |||||||||| | |||||||| |||||||||||| ||||||||||||||||  ||     
T  46046594 agtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacaaggacgtaattgatgcagattttgctgacgtgatgaaaggagggat 46046693  T
Q  231 caaaagtggaggaatctgaaattaca 256  Q
    |||||||||| |||||||||||||||    
T  46046694 caaaagtggaagaatctgaaattaca 46046719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 9619291 - 9619063
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || | || |||||||||||||| |||||||||||| ||||||||||| |||||||||||||| |||| ||  || ||||| ||||||     
T  9619291 gatttagattttgtccttgtaatttcatattcttccacttttggtccttcattccaccacgtaagcagaatctgtatacctggcacgtaaaaagagggag 9619192  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||| |||| ||||||||||||| ||||||| |||||||||||     
T  9619191 caaaagtggaggaatctgaaattacagggaccaaaaatgggaggaatatgaaattacagggacgt-atttatgcagattctgttgacttgatgaaaggag 9619093  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||||| |||||||||||||||    
T  9619092 ggaccaaaagtggaagaatctgaaattaca 9619063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 31090127 - 31090356
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||  || |||||||| ||||    
T  31090127 gatttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatttgcatacatggtacgtaaaatgaaggac 31090226  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| |||||||||  |||||||||||||||| ||| |||||||||| | |||||||||||| ||||| | ||||| |||||||||||     
T  31090227 caaaagtggaggaatctgaaattacggggaccaaaagtgggagaaatctgaaattacaaggacgtaatttatgtagattctattgacttgatgaaaggag 31090326  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     |||||||||| || |||||||||||||||    
T  31090327 ggaccaaaagtagaagaatctgaaattaca 31090356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 48 - 257
Target Start/End: Complemental strand, 4356173 - 4355963
Alignment:
Q  48 aatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaa 147  Q
    ||||||| |||||| |||||||||||||| ||||||||| || |||||||||||||||||||| || |||||||||||||||||||||||||||| ||||    
T  4356173 aatttcaaattcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatttgaa 4356074  T
Q  148 attacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggaggaatc 246  Q
    |||||||||||||||||| |||||||| |||||||||| | |||||||||||||||||| || | ||||||||||| ||  ||||||||||| | ||||     
T  4356073 attacaaggaccaaaagtaggaggaatctgaaattacaaggacgtaatttatgcagattctgctaacgtgatgaaatgagggaccaaaagtgaaagaata 4355974  T
Q  247 tgaaattacat 257  Q
    |||||||||||    
T  4355973 tgaaattacat 4355963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 31 - 256
Target Start/End: Complemental strand, 31944259 - 31944033
Alignment:
Q  31 ttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaa 130  Q
    |||||||| || | || |||||||||||||| ||||||| |||||||||||||||| || | |||||||||||||| ||  || ||||||||||||||||    
T  31944259 ttagattttgtccatgtaatttcatattcttccactttttgtccctcattccaccacgtcaacagaatctgcatacttggcacgtaaaatgagggaccaa 31944160  T
Q  131 aagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tga 229  Q
    |||||||||||| |||||||||| |||||||||||||||||||| |||||||||| | || ||||| |||||| ||||||||||||||||||||||  ||    
T  31944159 aagtggaggaatctgaaattacatggaccaaaagtgggaggaatctgaaattacatggacataattgatgcaggttttgttgacgtgatgaaaggagaga 31944060  T
Q  230 ccaaaagtggaggaatctgaaattaca 256  Q
    ||||||||||| |||| ||||||||||    
T  31944059 ccaaaagtggaagaatatgaaattaca 31944033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 48 - 256
Target Start/End: Complemental strand, 3018304 - 3018095
Alignment:
Q  48 aatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaa 147  Q
    ||||||| |||||  |||||||||||||| ||||||||| || |||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||    
T  3018304 aatttcagattctaccacttttggtcccttattccaccacgtcagcataatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatttgaa 3018205  T
Q  148 attacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggaggaatc 246  Q
    |||| | |||||||||||||||||||| |||||||||| |  ||||||||||||||||| || ||||||||||||||||  ||||||||||||| ||||     
T  3018204 attatagggaccaaaagtgggaggaatgtgaaattacaaggccgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaata 3018105  T
Q  247 tgaaattaca 256  Q
    ||||||||||    
T  3018104 tgaaattaca 3018095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 15641027 - 15640798
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||  || |||| ||||||| |||||| |||||||||| ||||||| ||||| || |||||||| ||||||||||| || |||||||| ||||    
T  15641027 gatttagattatgtccctgtaatttcagattcttccacttttggttcctcatttcaccacgtcagcagaatatgcatacatgacacgtaaaatgatggac 15640928  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||| ||| || ||| ||||||||||||     
T  15640927 caaaagtggaggaatctgaaattacaaggatcaaaagtgggaggaatctgaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggag 15640828  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||| | |||| ||||||||||    
T  15640827 ggaccaaaagtgaaagaatatgaaattaca 15640798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 43 - 253
Target Start/End: Complemental strand, 18667586 - 18667375
Alignment:
Q  43 cctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaat 142  Q
    |||| ||||||| |||||| || |||| |||||| ||||||||| || || ||||||||||||||||  || ||||||||||||||||||||||||||||    
T  18667586 cctgtaatttcagattcttccagtttttgtcccttattccaccacgtcagtagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaat 18667487  T
Q  143 atgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggag 241  Q
     | |||||||| ||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||     
T  18667486 ttaaaattacagggaccaaaagttggaggaatctgaaattacagggacgtaatttatgcagattttgttgacgtgatgaaaggagggaccaaaagtggaa 18667387  T
Q  242 gaatctgaaatt 253  Q
     ||| |||||||    
T  18667386 caatatgaaatt 18667375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 18713272 - 18713043
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| ||  ||| ||||||| |||||| || ||||||||||| ||||||||| || |||||||||| |||||||  ||| |||| ||||||||    
T  18713272 gatttagattttgtctctgtaatttcagattcttccagttttggtcccttattccaccacgtcagcagaatctacatacattgaacgtaaactgagggac 18713173  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||| ||||||| |||||||||| |||||||||| ||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||     
T  18713172 caaaagttgaggaatttgaaattacatggaccaaaagagggaggaatctgaaattacagggacgtaatttatgcagattttgctgacgtgatgaaaggag 18713073  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     |||||||| ||||  ||| ||||||||||    
T  18713072 ggaccaaaattggaacaatatgaaattaca 18713043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 34064048 - 34064277
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| ||  ||| ||||||| |||||| ||||||||||||||||||||||||  | ||| |||||| ||||||||  |  |||||||||||||    
T  34064048 gatttagattttgtctctgtaatttcagattcttccacttttggtccctcattccaccacatcagccgaatctacatacatggcatgtaaaatgagggac 34064147  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
     |||||||||||||| |||||||||| ||||||||||| |||||||| |||||||||| | |||||||||||||||||| || |||||||||||||| |     
T  34064148 taaaagtggaggaatctgaaattacagggaccaaaagtaggaggaatctgaaattacaaggacgtaatttatgcagattctgctgacgtgatgaaagaag 34064247  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||||| |||||||||||||||    
T  34064248 ggaccaaaagtggaagaatctgaaattaca 34064277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 48 - 256
Target Start/End: Original strand, 13132027 - 13132236
Alignment:
Q  48 aatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaa 147  Q
    ||||||| |||||| |||||||| ||||||||| ||||| || |||||||||||||||||||| || ||||||||||| | |||||||||| ||| ||||    
T  13132027 aatttcagattcttccacttttgatccctcatttcaccacgtcagcagaatctgcatacatgacacgtaaaatgaggggctaaaagtggagtaatctgaa 13132126  T
Q  148 attacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggaggaatc 246  Q
    |||||| |||||||||||||||| |||||||||||||| | |||||||||||||||||| || |||  ||||||||| |  ||||||||||||| ||||     
T  13132127 attacatggaccaaaagtgggagaaatatgaaattacaaggacgtaatttatgcagattctgctgatttgatgaaagaagggaccaaaagtggaagaata 13132226  T
Q  247 tgaaattaca 256  Q
    ||||||||||    
T  13132227 tgaaattaca 13132236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 3273932 - 3273705
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    |||||||||||  | |||| ||||||| |||||| |||||||| ||||||||| ||||| || || ||||||||||||||||  || |||||||||| ||    
T  3273932 gatttagattttatccctgtaatttcagattcttccacttttgatccctcatttcaccacgtcagtagaatctgcatacatggcacgtaaaatgagg-ac 3273834  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    |||| |||||| ||| |||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||| |  |||| |||||||||||     
T  3273833 caaacgtggagtaatctgaaattaca-ggaccaaaagtgggaggaatatgaaattacaaggacgtaatttatgcagattctaatgacttgatgaaaggag 3273735  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||||| |||| ||||||||||    
T  3273734 ggaccaaaagtggaagaatatgaaattaca 3273705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 48579932 - 48580161
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| ||  ||| ||||||| ||||||||| ||||||||||| ||||||||| || |||||||||| ||||||||  || ||||||||||||     
T  48579932 gatttagattttgtctctgtaatttcagattctttcaattttggtcccttattccaccacgtcagcagaatctacatacatggcacgtaaaatgagggag 48580031  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| |||||||| |  ||||||||||||||||||| |||||||||| | |||||||||||||| ||| || | | ||||||||||||     
T  48580032 caaaagtggaggaatttgaaattagagagaccaaaagtgggaggaatttgaaattacaaggacgtaatttatgcatattctgctaaggtgatgaaaggag 48580131  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     |||||||||||||  ||| ||||||||||    
T  48580132 ggaccaaaagtggaacaatatgaaattaca 48580161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 48260063 - 48259906
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| ||||||| |||||| |||||||| || ||||||||| || || |||| ||||||||||||||  || ||||||||||||     
T  48260063 gatttagattttgtccctgtaatttcaaattcttccacttttgatcgctcattccatcacgtcagcataatctgcatacatggcacgtaaaatgagggat 48259964  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattaca 185  Q
    ||||||||||||||| |||||| ||| ||||||||||| |||||||| ||||||||||    
T  48259963 caaaagtggaggaatctgaaataacagggaccaaaagtaggaggaatctgaaattaca 48259906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 28 - 158
Target Start/End: Complemental strand, 26252549 - 26252418
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| |||||||||||||| ||||||||||||| |||||||| | ||||||||||||||||||||||  || |||||||||||||    
T  26252549 gatttagattttgtccctgtaatttcatattcttccacttttggtcccccattccactacgtaagcagaatctgcatacatggcacgtaaaatgagggac 26252450  T
Q  128 caaaagt-ggaggaatatgaaattacaaggac 158  Q
    ||||||| |||||||| |||||||||| ||||    
T  26252449 caaaagtgggaggaatctgaaattacagggac 26252418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 155 - 256
Target Start/End: Complemental strand, 26252453 - 26252351
Alignment:
Q  155 ggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggaggaatctgaaatt 253  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||| |||||||||||  ||||||||||||| ||||||||||||    
T  26252453 ggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtggaagaatctgaaatt 26252354  T
Q  254 aca 256  Q
    |||    
T  26252353 aca 26252351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 35376440 - 35376332
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    |||||| |||| || |||| ||||||| | |||| |||||||||||||||||||||||| || |||| |||||| |||||||| || |||||||||||||    
T  35376440 gatttaaattttgtccctgtaatttcagaatcttccacttttggtccctcattccaccacgtcagcaaaatctgtatacatgacacgtaaaatgagggac 35376341  T
Q  128 caaaagtgg 136  Q
    |||||||||    
T  35376340 caaaagtgg 35376332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 3018078 - 3018155
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    ||||||||||| || |||| |||||||||||||| ||||||||||||||| || || || || |||||||||||||||    
T  3018078 gatttagattttgtccctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcata 3018155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 4355967 - 4356024
Alignment:
Q  48 aatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    ||||||||||||||||||||||||||||||||| || || || |||||||||||||||    
T  4355967 aatttcatattctttcacttttggtccctcatttcatcacgttagcagaatctgcata 4356024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 256
Target Start/End: Complemental strand, 35376344 - 35376245
Alignment:
Q  155 ggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggaggaatctgaaatt 253  Q
    |||||||||||||||||||| ||   ||||| | || |||||||||| |||| || ||||||||||||||||  ||||||||||||| |||||| |||||    
T  35376344 ggaccaaaagtgggaggaatctg---ttacatggacttaatttatgcggattctgctgacgtgatgaaaggagagaccaaaagtggaagaatctaaaatt 35376248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 15640781 - 15640830
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctc 77  Q
    ||||||||||| || |||| ||||||||||||||||||||||||||||||    
T  15640781 gatttagattttgtccctgtaatttcatattctttcacttttggtccctc 15640830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 256
Target Start/End: Original strand, 41947070 - 41947151
Alignment:
Q  176 tgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggaggaatctgaaattaca 256  Q
    |||||||||||| |||||||||||||||||| ||||||| | ||||||| |  |||||||||||||  ||| ||||||||||    
T  41947070 tgaaattacagggacgtaatttatgcagattctgttgactttatgaaagcagggaccaaaagtggaaaaatatgaaattaca 41947151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 9516728 - 9516688
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  9516728 aatgagggaccaaaagtggaagaatatgaaattacaaggac 9516688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 9619046 - 9619123
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    ||||||||||| || |||| ||||||| |||||| ||||||||||||||| || || || || | |||||||||||||    
T  9619046 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcaagtcaacagaatctgcata 9619123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 38574280 - 38574231
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctc 77  Q
    ||||||||||| || |||| |||||||||||||| |||||||||||||||    
T  38574280 gatttagattttgtccctgtaatttcatattcttccacttttggtccctc 38574231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 9619239 - 9619279
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  9619239 aatgaaggaccaaaagtggaagaatatgaaattacaaggac 9619279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 31090179 - 31090139
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  31090179 aatgagggaccaaaagtggaagaatatgaaattacagggac 31090139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 38574086 - 38574046
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  38574086 aatgagggaccaaaagtggaagaatatgaaattacagggac 38574046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 26252337 - 26252411
Alignment:
Q  31 ttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    |||||||| || |||| ||||||| |||||| ||||||||||||||| || || || || | |||||||||||||    
T  26252337 ttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcaagtcaacagaatctgcata 26252411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 37013016 - 37012942
Alignment:
Q  31 ttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    |||||||| || |||| |||||||||||||| ||||||||||| ||| || || || || |||| ||||||||||    
T  37013016 ttagattttgtccctgtaatttcatattcttccacttttggtcactcctttcatcacgtcagcaaaatctgcata 37012942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 158
Target Start/End: Complemental strand, 3018127 - 3018090
Alignment:
Q  121 gagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  3018127 gagggaccaaaagtggaagaatatgaaattacagggac 3018090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 3273692 - 3273737
Alignment:
Q  32 tagatttagtacctgcaatttcatattctttcacttttggtccctc 77  Q
    ||||||| || |||| |||||||||||||| |||||||||||||||    
T  3273692 tagattttgtccctgtaatttcatattcttccacttttggtccctc 3273737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 158
Target Start/End: Complemental strand, 3273737 - 3273700
Alignment:
Q  121 gagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  3273737 gagggaccaaaagtggaagaatatgaaattacagggac 3273700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 9396765 - 9396842
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    ||||||||||| || |||  ||||||| ||| || ||||||||||||||| || || || || |||||||||||||||    
T  9396765 gatttagattttgtccctataatttcaaatttttccacttttggtccctcctttcatcacgtcagcagaatctgcata 9396842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 13132253 - 13132176
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    ||||||||||  || |||| |||||||||||||| ||||||||||||||  || || ||  | |||||||||||||||    
T  13132253 gatttagattctgtccctgtaatttcatattcttccacttttggtcccttctttcatcaaatcagcagaatctgcata 13132176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 18713026 - 18713103
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    ||||||||||| || |||| ||||||||||| || || |||||||||||| || || || || |||| ||||||||||    
T  18713026 gatttagattttgtccctgtaatttcatattgttccaattttggtccctcctttcatcacgtcagcaaaatctgcata 18713103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 31944016 - 31944061
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtc 73  Q
    ||||||||||| || |||| |||||||||||||| |||||||||||    
T  31944016 gatttagattttgtccctgtaatttcatattcttccacttttggtc 31944061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 228 - 257
Target Start/End: Complemental strand, 31944165 - 31944136
Alignment:
Q  228 gaccaaaagtggaggaatctgaaattacat 257  Q
    ||||||||||||||||||||||||||||||    
T  31944165 gaccaaaagtggaggaatctgaaattacat 31944136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 34064294 - 34064217
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    ||||||||||| ||  ||| ||||||| |||||| ||||||||||||||  || || || || |||||||||||||||    
T  34064294 gatttagattttgtctctgtaatttcagattcttccacttttggtcccttctttcatcacgtcagcagaatctgcata 34064217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 158
Target Start/End: Original strand, 38574231 - 38574268
Alignment:
Q  121 gagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  38574231 gagggaccaaaagtggaagaatatgaaattacagggac 38574268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 48580178 - 48580129
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctc 77  Q
    ||||||||||| || |||| ||||||||||| || |||||||||||||||    
T  48580178 gatttagattttgtccctgtaatttcatattgttccacttttggtccctc 48580129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Original strand, 13132205 - 13132241
Alignment:
Q  122 agggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  13132205 agggaccaaaagtggaagaatatgaaattacagggac 13132241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 26252497 - 26252537
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||| ||||||||||||||| ||||||||||||||| ||||    
T  26252497 aatgggggaccaaaagtggaagaatatgaaattacagggac 26252537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 31944210 - 31944250
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||| ||||||||| ||||||||||||||| ||||    
T  31944210 aatgagggacaaaaagtggaagaatatgaaattacatggac 31944250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Original strand, 41947120 - 41947156
Alignment:
Q  122 agggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    ||||||||||||||||  |||||||||||||||||||    
T  41947120 agggaccaaaagtggaaaaatatgaaattacaaggac 41947156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 46046542 - 46046502
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    ||||||||| |||||||||| ||||||||||||||| ||||    
T  46046542 aatgagggatcaaaagtggaagaatatgaaattacagggac 46046502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 46046736 - 46046660
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcat 104  Q
    ||||||||||| || |||| ||||||| |||||| |||||||| |||||| || || || || |||| |||||||||    
T  46046736 gatttagattttgtccctgtaatttcagattcttccacttttgatccctcctttcatcacgtcagcaaaatctgcat 46046660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 143; Significance: 3e-75; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 31 - 256
Target Start/End: Original strand, 993816 - 994041
Alignment:
Q  31 ttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaa 130  Q
    ||||||||||| | || |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||    
T  993816 ttagatttagtccttgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaa 993915  T
Q  131 aagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tga 229  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||| ||||||||||| |||||| ||||||| |||| ||||||  ||    
T  993916 aagtggaggaatatg-aattacagggaccaaaagtgggaggaatctgaaattacagggacgtaatttatacagattctgttgacatgataaaaggaggga 994014  T
Q  230 ccaaaagtggaggaatctgaaattaca 256  Q
    ||||||||||| ||||||| |||||||    
T  994015 ccaaaagtggaagaatctgcaattaca 994041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 7125983 - 7126212
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||  ||||||| |||||| |||||||||||||| ||||||||| || |||||||||||||||||||  || |||||||||||||    
T  7125983 gatttagattttgtccctataatttcagattcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggac 7126082  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||     
T  7126083 caaaagtggaggaatttgaaattacagggaccaaaagtgggaggaatatgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggag 7126182  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||||| |||| ||||||||||    
T  7126183 ggaccaaaagtggaagaatatgaaattaca 7126212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 4919056 - 4919285
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||  || |||||||||||||    
T  4919056 gatttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatttgcatacatggtacgtaaaatgagggac 4919155  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||||| | |||||||||||||| ||| ||||||| |||||||||||     
T  4919156 caaaagtggaggaatttgaaattacagtgaccaaaagttggaggaatatgaaattacaaggacgtaatttatgcatattctgttgacttgatgaaaggag 4919255  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     || ||||||| || |||||||||||||||    
T  4919256 ggatcaaaagtagaagaatctgaaattaca 4919285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 17762594 - 17762365
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || ||   ||||||| |||||| |||||||||||||||||||||||| ||||||||||| ||||||||||  ||||||||||||||||    
T  17762594 gatttagattttgtccccataatttcagattcttccacttttggtccctcattccaccacgtaagcagaatttgcatacatgggacataaaatgagggac 17762495  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| | |||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||| || | ||||||| ||||||     
T  17762494 caaaagtggaggaatctaaaattacagggaccaaaagcgggaggaatatgaaattacagggacgtaatttatgcagattctgcttacgtgattaaaggag 17762395  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||||| |||||||||||||||    
T  17762394 ggaccaaaagtggaagaatctgaaattaca 17762365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 14144213 - 14143984
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| ||||||| |||||| |||||||||||||| ||||||||| || | |||||||||||||||||  || |||||||||||||    
T  14144213 gatttagattttgtccctgtaatttcaaattcttccacttttggtcccttattccaccacgtcaccagaatctgcatacatggcacgtaaaatgagggac 14144114  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaaggat 227  Q
    ||||||||||||||| |||||||||| ||||||||||||| |||||| |||||||||||| |||||||||||||||||| |  ||||||||||||| ||     
T  14144113 caaaagtggaggaatttgaaattacatggaccaaaagtggaaggaatctgaaattacagggacgtaatttatgcagattctactgacgtgatgaaatgag 14144014  T
Q  228 g-accaaaagtggaggaatctgaaattaca 256  Q
    | |||||||||||| |||| ||||||||||    
T  14144013 gtaccaaaagtggaagaatatgaaattaca 14143984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 24837235 - 24837464
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || | || |||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||  || ||||||||||||     
T  24837235 gatttagattttgtccttgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgtatacatggtacgtaaaatgagggat 24837334  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| |||||||||| |||||||||||| ||||||| |||||||||| | |||||||||||||||||| ||||||| |||||||||||     
T  24837335 caaaagtggaggaatctgaaattacagggaccaaaagtgagaggaatctgaaattacaaggacgtaatttatgcagattctgttgacttgatgaaaggag 24837434  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     || ||||||| || |||| ||||||||||    
T  24837435 ggagcaaaagtagaagaatttgaaattaca 24837464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 31 - 254
Target Start/End: Original strand, 41001422 - 41001646
Alignment:
Q  31 ttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaa 130  Q
    |||||||| || |||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||  || ||||||||||||| ||    
T  41001422 ttagattttgtccctgtaatttcatattcttccacttttggtccttcattccaccatgtaagcagaatctgcatacatggcacgtaaaatgagggactaa 41001521  T
Q  131 aagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tga 229  Q
    || ||||||||| |||||||||| |||||| |||||||||||| ||||||||||||  || ||||||||| || || ||||||| |||||||||||  ||    
T  41001522 aaatggaggaatctgaaattacagggaccagaagtgggaggaagatgaaattacagtgacataatttatgtaggttctgttgacttgatgaaaggaggga 41001621  T
Q  230 ccaaaagtggaggaatctgaaatta 254  Q
    ||||||||||| |||||||||||||    
T  41001622 ccaaaagtggaagaatctgaaatta 41001646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 28 - 257
Target Start/End: Original strand, 20709278 - 20709508
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||  || |||| ||||||| |||||| |||||||||||||||||| ||||| || |||||||||||||||||||  || |||||||||||||    
T  20709278 gatttagattctgtccctgtaatttcaaattcttccacttttggtccctcatttcaccacgtcagcagaatctgcatacatggcacgtaaaatgagggac 20709377  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagg-a 226  Q
     ||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||| | |||||||||||| ||| || ||| ||||||||||| |    
T  20709378 aaaaagtggaggaatatgaaattacagggatcaaaagtgggaggaatctgaaattacagggatgtaatttatgcatattctgctgatgtgatgaaaggaa 20709477  T
Q  227 tgaccaaaagtggaggaatctgaaattacat 257  Q
     ||| ||||||||| |||| |||||||||||    
T  20709478 ggacaaaaagtggaagaatatgaaattacat 20709508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 28 - 257
Target Start/End: Original strand, 31799706 - 31799936
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| ||||||| |||||| |||||||||||||| ||||||||| ||||||||||| || |||||||  |  |||||||||||||    
T  31799706 gatttagattttgtccctgtaatttcagattcttccacttttggtcccttattccaccacgtaagcagaatttgtatacatggcatgtaaaatgagggac 31799805  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||| | |||||||||| |||||||||||||||||||| |||||||| ||| |||||||||||||| ||| || ||||||||||||||||     
T  31799806 caaaagtggaggattttgaaattacagggaccaaaagtgggaggaatctgaaattaaagggacgtaatttatgcaaattctgctgacgtgatgaaaggag 31799905  T
Q  227 tgaccaaaagtggaggaatctgaaattacat 257  Q
     || |||||| ||| ||||||||||||||||    
T  31799906 ggatcaaaagaggaagaatctgaaattacat 31799936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 24650766 - 24650994
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| |||||||||||||| ||||||||||  |||||||||||| || |||| ||||||||||||||  || |||||||||||||    
T  24650766 gatttagattttgttcctgtaatttcatattcttccacttttggtagctcattccaccacgtcagcaaaatctgcatacatggcacgtaaaatgagggac 24650865  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||| ||||||||| |||||||||| ||||| |||||||||| |||||||||||||||| | ||||||||||| |||| || ||||||||||||||||     
T  24650866 caaaaatggaggaatctgaaattacagggacc-aaagtgggagaaatatgaaattacagggatgtaatttatgcggattctgctgacgtgatgaaaggag 24650964  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     || |||||||||| |||||| ||||||||    
T  24650965 ggatcaaaagtggaagaatctaaaattaca 24650994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 48 - 256
Target Start/End: Original strand, 6817208 - 6817416
Alignment:
Q  48 aatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaa 147  Q
    ||||||| |||||| |||||||||||||||||| ||||| || |||||||||||||||||||  || |||||| ||||||||||| ||||||||| ||||    
T  6817208 aatttcagattcttccacttttggtccctcatttcaccacgtcagcagaatctgcatacatggcacgtaaaataagggaccaaaaatggaggaatctgaa 6817307  T
Q  148 attacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggaggaatc 246  Q
    ||||| || | |||||||||||||||| |||||||||||| |||||||||||||| ||| || ||| |||||||||||| |||||||||||||| ||||     
T  6817308 attac-agaatcaaaagtgggaggaatttgaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagtgaccaaaagtggaagaata 6817406  T
Q  247 tgaaattaca 256  Q
    ||||||||||    
T  6817407 tgaaattaca 6817416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 24074614 - 24074386
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || | || |||||||||||||| |||||||||||||| |||  |||| || ||||||||||||||| |||  || |||||||||||||    
T  24074614 gatttagattttgtccttgtaatttcatattcttccacttttggtcccttatttaaccacgtcagcagaatctgcatatatggcacgtaaaatgagggac 24074515  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||| ||| ||||||||| |||| ||||||||||| |||| ||||||||  || |||||||||||||||||| || ||||||||||||||||     
T  24074514 caaaagtggagaaatttgaaattac-aggatcaaaagtgggatgaatctgaaattatggggacgtaatttatgcagattctgctgacgtgatgaaaggag 24074416  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||||| |||| ||||||||||    
T  24074415 ggaccaaaagtggaagaatatgaaattaca 24074386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 29445118 - 29444889
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || | || ||||||| |||||| |||||||||||||| ||||||||| || || | ||| ||||||||||| || |||||||||||||    
T  29445118 gatttagattttgtccttgtaatttcagattcttccacttttggtcccttattccaccacgtcagtaaaatttgcatacatgacacgtaaaatgagggac 29445019  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
     |||| || |||||| |||||||||| ||||||||| | |||||||| |||||||||||| |||||||||||||||||| || ||||||||||||||||     
T  29445018 aaaaaatgtaggaatttgaaattacagggaccaaaactaggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggag 29444919  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     |||||||||| || |||| ||||||||||    
T  29444918 ggaccaaaagtagaagaatatgaaattaca 29444889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 28 - 200
Target Start/End: Complemental strand, 23979213 - 23979042
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| ||||||| |||||| |||||||||||||||||| ||||| || |||||||||||||||||||| || |||||||| ||||    
T  23979213 gatttagattttgtccctgtaatttcaaattcttccacttttggtccctcatttcaccacgtcagcagaatctgcatacatgacacgtaaaatga-ggac 23979115  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatg 200  Q
    |||| |||||| ||| |||||||| | |||||||||||||||| |||||||||||||| | ||||||||||||    
T  23979114 caaacgtggagtaatctgaaattaaagggaccaaaagtgggagaaatatgaaattacaaggacgtaatttatg 23979042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 18336768 - 18336551
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| ||||||| |||||| |||||||| ||||| ||| ||||||||||||||||| || |||||||  || |||||||||||||    
T  18336768 gatttagattttgtccctgtaatttcagattcttccacttttgatcccttattacaccatgtaagcagaatttgtatacatgtcacgtaaaatgagggac 18336669  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| ||||||||||            |||| |||| |||||||||||| |||||||||||||| ||| || ||| ||||||||||||     
T  18336668 caaaagtggaggaatctgaaattaca------------gggacgaatctgaaattacagggacgtaatttatgcaaattctgctgatgtgatgaaaggag 18336581  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     || |||||| ||| |||||||||||||||    
T  18336580 ggatcaaaagcggaagaatctgaaattaca 18336551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 48 - 223
Target Start/End: Original strand, 22571163 - 22571338
Alignment:
Q  48 aatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaa 147  Q
    |||||||||||||| |||||||||||||||||| ||||| || |  ||||| ||  | | ||| || | ||||||||||||||||| ||| |||||||||    
T  22571163 aatttcatattcttccacttttggtccctcatttcaccacgtcaaaagaatatgtgtgcgtgatacgtgaaatgagggaccaaaagcggatgaatatgaa 22571262  T
Q  148 attacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaa 223  Q
    |||| | |||||||| || |||||||  |||||||||||| ||||||||||||||||||||||||||||| |||||    
T  22571263 attagagggaccaaatgtaggaggaacctgaaattacagggacgtaatttatgcagattttgttgacgtggtgaaa 22571338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 158
Target Start/End: Complemental strand, 14411977 - 14411847
Alignment:
Q  29 atttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggacc 128  Q
    |||||||||| || | || ||||||| |||||| ||| |||||||||||||||||||| ||||||||||||| ||||||||| || ||||||||||||||    
T  14411977 atttagattttgtccttgtaatttcagattcttccacgtttggtccctcattccaccacgtaagcagaatctacatacatgacacgtaaaatgagggacc 14411878  T
Q  129 aaaagt-ggaggaatatgaaattacaaggac 158  Q
    |||||| |||||||| |||||||||| ||||    
T  14411877 aaaagtgggaggaatctgaaattacagggac 14411847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 155 - 257
Target Start/End: Complemental strand, 14411882 - 14411779
Alignment:
Q  155 ggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggaggaatctgaaatt 253  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||| ||| || ||||||||||||||||  ||||||||||||| ||||||||||||    
T  14411882 ggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcaaattctgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaatt 14411783  T
Q  254 acat 257  Q
    ||||    
T  14411782 acat 14411779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 30512326 - 30512459
Alignment:
Q  1 ttttggttttagtccctgtnnnnnnnngatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatct 100  Q
    |||||||||||||||||||        ||||||||||| || |||| ||||||| ||| || |||||||||||||||||||||||| |||||||||||||    
T  30512326 ttttggttttagtccctgtaaaaaaaggatttagatttggtccctgtaatttcagatttttccacttttggtccctcattccaccacgtaagcagaatct 30512425  T
Q  101 gcatacatgaaacat-aaaatgagggaccaaaag 133  Q
    |||||||||  || | |||||||||||| |||||    
T  30512426 gcatacatggcacgtaaaaatgagggacgaaaag 30512459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 30552666 - 30552799
Alignment:
Q  1 ttttggttttagtccctgtnnnnnnnngatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatct 100  Q
    |||||||||||||||||||        ||||||||||| || |||| ||||||| ||| || |||||||||||||||||||||||| |||||||||||||    
T  30552666 ttttggttttagtccctgtaaaaaaaggatttagatttggtccctgtaatttcagatttttccacttttggtccctcattccaccacgtaagcagaatct 30552765  T
Q  101 gcatacatgaaacat-aaaatgagggaccaaaag 133  Q
    |||||||||  || | |||||||||||| |||||    
T  30552766 gcatacatggcacgtaaaaatgagggacgaaaag 30552799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 256
Target Start/End: Original strand, 27159154 - 27159252
Alignment:
Q  159 caaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggaggaatctgaaattaca 256  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||| || |||||||||||||| |  |||||||| |||| |||| | ||||||||    
T  27159154 caaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaagaagggaccaaaaatggaagaatataaaattaca 27159252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 158
Target Start/End: Original strand, 27159056 - 27159185
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    |||||| |||| || |||| ||||||| |||||| |||||||||||||| ||||||||| || |||| ||||| |||||  |  || ||||||||||||     
T  27159056 gatttaaattttgtccctgtaatttcagattcttccacttttggtcccttattccaccacgtcagcaaaatctacatac--ggcacgtaaaatgagggat 27159153  T
Q  128 caaaagt-ggaggaatatgaaattacaaggac 158  Q
    ||||||| |||||||| |||||||||| ||||    
T  27159154 caaaagtgggaggaatctgaaattacagggac 27159185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 7126229 - 7126152
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    ||||||||||| || |||| |||||||||||||| ||||||||||||||| || || || || |||||||||||||||    
T  7126229 gatttagattttgtccctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcata 7126152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 14143967 - 14144044
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    ||||||||||| || |||| |||||||||||||| |||||||||| ||||||| || || || || ||||||||||||    
T  14143967 gatttagattttgtccctgtaatttcatattcttccacttttggtacctcatttcatcacgtcagtagaatctgcata 14144044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 993865 - 993825
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  993865 aatgagggaccaaaagtggaagaatatgaaattacaaggac 993825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 24074370 - 24074446
Alignment:
Q  29 atttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    |||||||||| ||  ||| |||||||||||||| ||||||||||||||| || || || || |||||||||||||||    
T  24074370 atttagattttgtctctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcata 24074446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 24837287 - 24837247
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  24837287 aatgagggaccaaaagtggaagaatatgaaattacaaggac 24837247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 17762348 - 17762425
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    |||||| |||| || |||| ||||||| |||||| ||||||||||||||| ||  | || ||||||||||||||||||    
T  17762348 gatttatattttgttcctgtaatttcagattcttccacttttggtccctcctttaatcacgtaagcagaatctgcata 17762425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 24074561 - 24074602
Alignment:
Q  117 aaatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||| |||||||||||||||| ||||||||||||||||||||    
T  24074561 aaataagggaccaaaagtggaagaatatgaaattacaaggac 24074602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 4919108 - 4919068
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  4919108 aatgagggaccaaaagtggaagaatatgaaattacagggac 4919068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 20959402 - 20959330
Alignment:
Q  29 atttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctg 101  Q
    |||||||||| || |||||||||||| |||| | |||||||||||  |||||  ||||||| |||||||||||    
T  20959402 atttagattttgtccctgcaatttcagattcctccacttttggtcgttcatttaaccatgttagcagaatctg 20959330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 22571196 - 22571160
Alignment:
Q  117 aaatgagggaccaaaagtggaggaatatgaaattaca 153  Q
    ||||||||||||||||||||| |||||||||||||||    
T  22571196 aaatgagggaccaaaagtggaagaatatgaaattaca 22571160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 257
Target Start/End: Original strand, 20947068 - 20947098
Alignment:
Q  227 tgaccaaaagtggaggaatctgaaattacat 257  Q
    |||||||||||||||||||||||||||||||    
T  20947068 tgaccaaaagtggaggaatctgaaattacat 20947098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 6817241 - 6817200
Alignment:
Q  117 aaatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    ||||||||||||||||||||| |||| |||||||||| ||||    
T  6817241 aaatgagggaccaaaagtggaagaatctgaaattacatggac 6817200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 257
Target Start/End: Complemental strand, 6817265 - 6817204
Alignment:
Q  197 tatgcagattttgttgacgtgatgaaaggatg-accaaaagtggaggaatctgaaattacat 257  Q
    |||||||||| || ||||||| ||||| || | |||||||||||| ||||||||||||||||    
T  6817265 tatgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacat 6817204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 158
Target Start/End: Original strand, 7126180 - 7126217
Alignment:
Q  121 gagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  7126180 gagggaccaaaagtggaagaatatgaaattacagggac 7126217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 14144020 - 14143979
Alignment:
Q  117 aaatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||| |||||||||||| ||||||||||||||| ||||    
T  14144020 aaatgaggtaccaaaagtggaagaatatgaaattacagggac 14143979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 20709331 - 20709290
Alignment:
Q  117 aaatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    ||||||||||||||||||||| |||| |||||||||| ||||    
T  20709331 aaatgagggaccaaaagtggaagaatttgaaattacagggac 20709290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 23979160 - 23979201
Alignment:
Q  117 aaatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    ||||||||||||||||||||| |||| |||||||||| ||||    
T  23979160 aaatgagggaccaaaagtggaagaatttgaaattacagggac 23979201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 158
Target Start/End: Complemental strand, 29444921 - 29444884
Alignment:
Q  121 gagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||| || ||||||||||||||||||||    
T  29444921 gagggaccaaaagtagaagaatatgaaattacaaggac 29444884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 29444892 - 29444949
Alignment:
Q  48 aatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    ||||||||||||||  |||||||||||||| || || || || |||||||||||||||    
T  29444892 aatttcatattcttctacttttggtccctcctttcatcacgtcagcagaatctgcata 29444949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 6817432 - 6817388
Alignment:
Q  29 atttagatttagtacctgcaatttcatattctttcacttttggtc 73  Q
    |||||||||| || |||| |||||||||||||| |||||||||||    
T  6817432 atttagattttgtccctgtaatttcatattcttccacttttggtc 6817388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 14411926 - 14411966
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||| ||||| |||| |||||||||||||||    
T  14411926 aatgagggaccaaacgtggaagaatctgaaattacaaggac 14411966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 20947061 - 20947097
Alignment:
Q  117 aaatgagggaccaaaagtggaggaatatgaaattaca 153  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  20947061 aaatgagtgaccaaaagtggaggaatctgaaattaca 20947097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 27159268 - 27159192
Alignment:
Q  29 atttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    |||||||||| || |||| ||||| |||||||| || |||||||||||  || || || || |||||||||||||||    
T  27159268 atttagattttgtccctgtaattttatattcttccatttttggtcccttctttcatcacgtcagcagaatctgcata 27159192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Original strand, 29445070 - 29445106
Alignment:
Q  122 agggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||| |||| |||||||||||||||    
T  29445070 agggaccaaaagtggaagaatctgaaattacaaggac 29445106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 162
Target Start/End: Complemental strand, 30512405 - 30512361
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggaccaaa 162  Q
    ||||||||||||||||||||  ||| |||||||||| ||||||||    
T  30512405 aatgagggaccaaaagtggaaaaatctgaaattacagggaccaaa 30512361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 162
Target Start/End: Complemental strand, 30552745 - 30552701
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggaccaaa 162  Q
    ||||||||||||||||||||  ||| |||||||||| ||||||||    
T  30552745 aatgagggaccaaaagtggaaaaatctgaaattacagggaccaaa 30552701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 41001471 - 41001431
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    ||||| |||||||||||||| ||||||||||||||| ||||    
T  41001471 aatgaaggaccaaaagtggaagaatatgaaattacagggac 41001431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 138; Significance: 3e-72; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 4875 - 4646
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || | || |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||  || |||||||||||||    
T  4875 gatttagattttgtccttgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggac 4776  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||| | |||||||||||||||||| ||||||| |||| ||||||     
T  4775 caaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacacggacgtaatttatgcagattctgttgacttgataaaaggag 4676  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     |||||||||| || |||||| ||||||||    
T  4675 ggaccaaaagtagaagaatctcaaattaca 4646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 4823 - 4863
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  4823 aatgagggaccaaaagtggaagaatatgaaattacaaggac 4863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 3e-72; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 10108682 - 10108453
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| |||||||||||||| |||||||||||||| ||||||||| || |||||||||||||||||||  || |||||||||||||    
T  10108682 gatttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggac 10108583  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| |||||||||| ||||||||||||||| |||| |||||||||| | |||||||||||||||||| || ||||||||||||||||     
T  10108582 caaaagtggaggaatttgaaattacagggaccaaaagtgggacgaatctgaaattacaaggacgtaatttatgcagattctgctgacgtgatgaaaggag 10108483  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||||| |||| ||||||||||    
T  10108482 ggaccaaaagtggaagaatatgaaattaca 10108453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 28 - 254
Target Start/End: Original strand, 42113050 - 42113277
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||  || |||| ||||| | ||||||||||||||||||||||||| ||||| || |||||||||||||||||||| ||||||||||||||||    
T  42113050 gatttagattatgtccctgtaatttaagattctttcacttttggtccctcatttcaccacgtcagcagaatctgcatacatgacacataaaatgagggac 42113149  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||| || ||||||||||||| |||| |||| |||||||||||     
T  42113150 caaaagtggagtaatatgaaattatagggaccaaaagtgggaggaatatgaaattacagggacataatttatgcagaatttgctgacatgatgaaaggag 42113249  T
Q  227 tgaccaaaagtggaggaatctgaaatta 254  Q
     || |||||||||| |||| ||||||||    
T  42113250 ggatcaaaagtggaagaatttgaaatta 42113277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 31 - 256
Target Start/End: Complemental strand, 26136994 - 26136768
Alignment:
Q  31 ttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaa 130  Q
    |||||||| || |||| ||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||  || ||||||||||||||||    
T  26136994 ttagattttgtccctgtaatttcagattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaa 26136895  T
Q  131 aagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaaggatg-a 229  Q
    || ||||||||| ||||| ||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||| || |||| ||||||||||| | |    
T  26136894 aaatggaggaatctgaaagtacaaggaccaaaagtgggagaaatctgaaattacagggacgtaatttatgcagattatgctgacttgatgaaaggaggaa 26136795  T
Q  230 ccaaaagtggaggaatctgaaattaca 256  Q
     ||||| |||| |||||||||||||||    
T  26136794 tcaaaattggaagaatctgaaattaca 26136768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 56 - 256
Target Start/End: Original strand, 17622981 - 17623182
Alignment:
Q  56 attctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaaattacaag 155  Q
    |||||| |||||||||||||||||||||||| || |||||||||||| ||||||  || |||||||||||||||||||||||||||| |||||||||| |    
T  17622981 attcttccacttttggtccctcattccaccacgtcagcagaatctgcgtacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagg 17623080  T
Q  156 gaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggaggaatctgaaatta 254  Q
    ||||||||||||||||||| |||||||||||| || ||||||||||||||| || |||||||||||||||| |||||||||||||| |||| ||||||||    
T  17623081 gaccaaaagtgggaggaatttgaaattacagggacataatttatgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatttgaaatta 17623180  T
Q  255 ca 256  Q
    ||    
T  17623181 ca 17623182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 22494696 - 22494468
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    |||||||| || || |||| ||||||| |||||| |||||||||||||||||||||||| ||||||||||| ||||||||||| || |||||||||||||    
T  22494696 gatttagaatttgtccctgtaatttcaaattcttccacttttggtccctcattccaccacgtaagcagaatttgcatacatgacacgtaaaatgagggac 22494597  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaaggat 227  Q
    ||||||||||||||| |||||||||  ||||||||||| |||||||| | |||||||||| |||||||||||||||||| || ||||||||| |||| |     
T  22494596 caaaagtggaggaatctgaaattactgggaccaaaagtaggaggaatctaaaattacagggacgtaatttatgcagattctgctgacgtgattaaagaag 22494497  T
Q  228 gaccaaaagtggaggaatctgaaattaca 256  Q
    |||||||| |||| |||| ||||||||||    
T  22494496 gaccaaaaatggaagaatatgaaattaca 22494468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 21148003 - 21148231
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| ||||||| |||||| |||||||||||||| ||||||||| || ||||||||||||||| |||| || |||||||||||||    
T  21148003 gatttagattttgtccctgtaatttcagattcttccacttttggtcccttattccaccacgtcagcagaatctgcatatatgacacgtaaaatgagggac 21148102  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| ||||||||  ||||||||||||||||||||| |||||||||||| |||||||||||||||||| || |||| |||||||||||     
T  21148103 caaaagtggaggaatttgaaatta-taggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgctgacatgatgaaaggag 21148201  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||| ||||||||| |||| ||||||||||    
T  21148202 ggactaaaagtggaagaatatgaaattaca 21148231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 30789573 - 30789802
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| ||  ||| ||||||| |||| | |||||||| ||||||||| ||||| || |||| ||||||||||||||  || ||| ||||||||     
T  30789573 gatttagattttgtctctgtaatttcagattcctccacttttgatccctcatttcaccacgttagcaaaatctgcatacatggcacgtaagatgagggat 30789672  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaaggat 227  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||| ||||||||||||| |||    
T  30789673 caaaagtggaggaatctgaaattacaaggaccaaaagtgggaggaatatgaaattacaaggacgtaattgatgcagattttgctgacgtgatgaaacgat 30789772  T
Q  228 -gaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||||| |||||||||||||||    
T  30789773 ggaccaaaagtggaagaatctgaaattaca 30789802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 43851730 - 43851959
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| ||||||| |||||| |||||||| |||||||||||||||  | |||||||||||||||||||| || ||||||||||||     
T  43851730 gatttagattttgtccctgtaatttcagattcttccacttttgatccctcattccaccacatcagcagaatctgcatacatgacacgtaaaatgagggat 43851829  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| | |||||||| ||||| |||||| ||||||||||||||||     
T  43851830 caaaagtggaggaatatgaaattacagggaccaaaagtgggaggaatctgaaattacaaggacgtaattgatgcaaattttgctgacgtgatgaaaggag 43851929  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||| ||||||||| ||||||  |||||||    
T  43851930 ggacaaaaagtggaagaatcttgaattaca 43851959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 28 - 223
Target Start/End: Original strand, 14767573 - 14767768
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| ||||||| ||| || |||||||||||||| ||||||||| || ||||||||||||||| |||| || ||||||||| |||    
T  14767573 gatttagattttgtccctgtaatttcagatttttccacttttggtcccttattccaccacgtcagcagaatctgcatatatgacacgtaaaatgagagac 14767672  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaa 223  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||    
T  14767673 caaaagtggaggaatttgaaattacagggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgttgacgtgatgaaa 14767768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 7689835 - 7689606
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    |||||| |||| || |||| ||||||| |||||| |||||||| ||||||||||||||| || |||||||||||||||||||  || ||||||||||||     
T  7689835 gatttaaattttgtccctgtaatttcagattcttccacttttgatccctcattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggat 7689736  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| |||||||||| |||| ||||||||||||||| |||||||||| | |||||||| ||||||||||||  || ||||||||| ||     
T  7689735 caaaagtggaggaatctgaaattacagggactaaaagtgggaggaatctgaaattacaaggacgtaattgatgcagattttgccgatgtgatgaaaagag 7689636  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||||| |||||||||||||||    
T  7689635 ggaccaaaagtggaagaatctgaaattaca 7689606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 28 - 254
Target Start/End: Complemental strand, 5555181 - 5554954
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| |||||||||||||| |||||||||||||| |||||||||||| |||| |||||||||| |||  || |||||||||||||    
T  5555181 gatttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccatgtcagcaaaatctgcataaatggcacgtaaaatgagggac 5555082  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    |||||||| ||||||  ||||||||| ||||||||| | |||||||| ||||||| |||| |||||||||||||||||| || |||||||||||||| |     
T  5555081 caaaagtgaaggaattcgaaattacagggaccaaaactaggaggaatctgaaattccagggacgtaatttatgcagattctgctgacgtgatgaaagaag 5554982  T
Q  227 tgaccaaaagtggaggaatctgaaatta 254  Q
     ||||||||||||| |||| ||||||||    
T  5554981 ggaccaaaagtggaagaatatgaaatta 5554954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 14820606 - 14820377
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| |||||||||||||| |||||||||||||| ||||||||| || ||||||||||||||||||||  | |||||||||||||    
T  14820606 gatttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatgactcgtaaaatgagggac 14820507  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||| ||||||| ||| |||||  ||| ||||| | |||| ||| |||||||||||| |||||||||||||||||| || ||| ||||||||||||     
T  14820506 caaaagtagaggaatttgagattacggggagcaaaactaggagaaatctgaaattacagggacgtaatttatgcagattctgctgatgtgatgaaaggag 14820407  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||||| |||| ||||||||||    
T  14820406 ggaccaaaagtggaagaatatgaaattaca 14820377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 42606065 - 42605836
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || || | ||||||| |||||| |||||||||||| | ||||||||| ||||||||||| ||||| ||||  || |||||||||||||    
T  42606065 gatttagattttgtccccgtaatttcaaattcttccacttttggtccattattccaccacgtaagcagaatttgcattcatggcacgtaaaatgagggac 42605966  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| ||||||||||  ||||||||| ||||||||| |||||||||||| |||||||||||||| ||| |  ||||||||| ||||||     
T  42605965 caaaagtggaggaatctgaaattacagcgaccaaaagcgggaggaatttgaaattacagggacgtaatttatgcatattctactgacgtgattaaaggag 42605866  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||||| |||| ||||||||||    
T  42605865 ggaccaaaagtggaagaatatgaaattaca 42605836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 48 - 256
Target Start/End: Complemental strand, 2583612 - 2583403
Alignment:
Q  48 aatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaa 147  Q
    ||||||| |||||| |||||||||| |||||||||||||  | ||| |||||||||||||||  |  ||||||||||||| |||||||||||||| ||||    
T  2583612 aatttcagattcttccacttttggttcctcattccaccacatcagccgaatctgcatacatggcatgtaaaatgagggactaaaagtggaggaatttgaa 2583513  T
Q  148 attacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggaggaatc 246  Q
    |||||| ||||||||||| |||||||| |||||||||||| |||||||||||||||||| || ||||||||||||||||  || ||||||| || |||||    
T  2583512 attacagggaccaaaagtaggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggatcaaaagtagaagaatc 2583413  T
Q  247 tgaaattaca 256  Q
     |||||||||    
T  2583412 cgaaattaca 2583403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 56 - 256
Target Start/End: Original strand, 43481408 - 43481609
Alignment:
Q  56 attctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaaattacaag 155  Q
    |||||| ||||||||||| |||||||||||| | ||| ||||| ||||||||||  || ||||| |||||| ||||||||||||||| | |||||||||     
T  43481408 attcttccacttttggtctctcattccaccacgcaagtagaatttgcatacatggcacgtaaaacgagggatcaaaagtggaggaatctaaaattacaaa 43481507  T
Q  156 gaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagg-atgaccaaaagtggaggaatctgaaatta 254  Q
    |||||| ||  |||||||| |||||||||| | |||||||||||||||||| || ||||||||| ||||| | |||||| |||||| |||| ||||||||    
T  43481508 gaccaagagcaggaggaatctgaaattacaaggacgtaatttatgcagattgtgctgacgtgattaaaggaaagaccaagagtggaagaatttgaaatta 43481607  T
Q  255 ca 256  Q
    ||    
T  43481608 ca 43481609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 28 - 199
Target Start/End: Original strand, 26532849 - 26533020
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| ||||||| ||| || |||||||| ||||||||||||||| || |||||||||||||||||||| || ||||||||||||     
T  26532849 gatttagattttgtccctgtaatttcaaatttttccacttttgatccctcattccaccacgtcagcagaatctgcatacatgacacgtaaaatgagggat 26532948  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttat 199  Q
     |||||||||||||| |||||||| | | |||||||||| ||||| | |||||||||| | | |||||||||    
T  26532949 taaaagtggaggaatctgaaattataggaaccaaaagtgtgaggagtttgaaattacaaggatgtaatttat 26533020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 10171454 - 10171383
Alignment:
Q  29 atttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatct 100  Q
    |||||||||| || |||| ||||| | |||||||||||||||||||||||||||| ||||| ||||||||||    
T  10171454 atttagattttgtccctgtaattttagattctttcacttttggtccctcattccatcatgtcagcagaatct 10171383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 10108436 - 10108513
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    ||||||||||| || |||| |||||||||||||| ||||||||||||||| || || || || |||||||||||||||    
T  10108436 gatttagattttgtccctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcata 10108513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 14820360 - 14820437
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    ||||||||||| || |||| |||||||||||||| ||||||||||||||| || || ||  | |||||||||||||||    
T  14820360 gatttagattttgtccctgtaatttcatattcttccacttttggtccctcctttcatcacatcagcagaatctgcata 14820437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 21148245 - 21148171
Alignment:
Q  31 ttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    |||||||| || | || |||||||||||||| ||||||| ||||||| || || ||||| |||||||||||||||    
T  21148245 ttagattttgtccttgtaatttcatattcttccacttttagtccctcctttcatcatgtcagcagaatctgcata 21148171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 5554955 - 5555012
Alignment:
Q  48 aatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    |||||||||||||| ||||||||||||||  || || || || |||||||||||||||    
T  5554955 aatttcatattcttccacttttggtcccttctttcatcacgtcagcagaatctgcata 5555012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 158
Target Start/End: Complemental strand, 7689638 - 7689601
Alignment:
Q  121 gagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  7689638 gagggaccaaaagtggaagaatctgaaattacaaggac 7689601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 158
Target Start/End: Complemental strand, 10108485 - 10108448
Alignment:
Q  121 gagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  10108485 gagggaccaaaagtggaagaatatgaaattacagggac 10108448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 158
Target Start/End: Complemental strand, 14820409 - 14820372
Alignment:
Q  121 gagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  14820409 gagggaccaaaagtggaagaatatgaaattacagggac 14820372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 17623199 - 17623122
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    ||||||||||| || | || ||||||| |||||| ||||||||||| ||| || || || || |||||||||||||||    
T  17623199 gatttagattttgtccttgtaatttcaaattcttccacttttggtcactcctttcatcacgtcagcagaatctgcata 17623122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 158
Target Start/End: Original strand, 21148199 - 21148236
Alignment:
Q  121 gagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  21148199 gagggactaaaagtggaagaatatgaaattacaaggac 21148236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Original strand, 5555133 - 5555169
Alignment:
Q  122 agggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  5555133 agggaccaaaagtggaagaatatgaaattacagggac 5555169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Original strand, 10108634 - 10108670
Alignment:
Q  122 agggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  10108634 agggaccaaaagtggaagaatatgaaattacagggac 10108670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Original strand, 14820558 - 14820594
Alignment:
Q  122 agggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  14820558 agggaccaaaagtggaagaatatgaaattacagggac 14820594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 22494644 - 22494684
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  22494644 aatgagggaccaaaagtggaagaatttgaaattacagggac 22494684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 26136945 - 26136985
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  26136945 aatgagggaccaaaagtggaagaatctgaaattacagggac 26136985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 256
Target Start/End: Complemental strand, 30789650 - 30789590
Alignment:
Q  197 tatgcagattttgttgacgtgatgaaaggatg-accaaaagtggaggaatctgaaattaca 256  Q
    ||||||||||||| | ||||| ||||| || | | ||||||||||||||||||||||||||    
T  30789650 tatgcagattttgctaacgtggtgaaatgagggatcaaaagtggaggaatctgaaattaca 30789590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 30789626 - 30789590
Alignment:
Q  117 aaatgagggaccaaaagtggaggaatatgaaattaca 153  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  30789626 aaatgagggatcaaaagtggaggaatctgaaattaca 30789590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 30789819 - 30789743
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcat 104  Q
    ||||||||||| || |||| ||||||| |||||| |||||||||||| || || || || || |||| |||||||||    
T  30789819 gatttagattttgtccctgtaatttcagattcttccacttttggtccatcgtttcatcacgtcagcaaaatctgcat 30789743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 138; Significance: 3e-72; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 24732250 - 24732021
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || | || |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||  || |||||||||||||    
T  24732250 gatttagattttgtccatgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggac 24732151  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| |||||||| | |||||||||||||||||||| |||||||||| | |||||||||||| ||||| ||||||| |||||||||||     
T  24732150 caaaagtggaggaatctgaaattatagggaccaaaagtgggaggaatctgaaattacaaggacgtaatttatgtagattatgttgacttgatgaaaggag 24732051  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     |||||||||| || |||||||||||||||    
T  24732050 ggaccaaaagtagaagaatctgaaattaca 24732021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 91 - 254
Target Start/End: Original strand, 3229992 - 3230155
Alignment:
Q  91 agcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaac 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  3229992 agcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacagggac 3230091  T
Q  191 gtaatttatgcagattttgttgacgtgatgaaaggatgaccaaaagtggaggaatctgaaatta 254  Q
    || ||||||||||||| |||||||||||||||| |||||||||||||| | |||| ||||||||    
T  3230092 gtgatttatgcagattctgttgacgtgatgaaaagatgaccaaaagtgaaagaatatgaaatta 3230155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 28 - 253
Target Start/End: Original strand, 26385344 - 26385566
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| ||||| |||||||| |||||||||||||||||||||||| |||||||||||||| |||||||  || |||||||||||||    
T  26385344 gatttagattttgtccctgtaattttatattcttccacttttggtccctcattccaccacgtaagcagaatctgtatacatggcacgtaaaatgagggac 26385443  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||| |||| ||||||||| |||    |||| |||||||||||     
T  26385444 caaaagtggaggaatctgaaattacagggaccaaaactgggaggaatatgaaattacagggacgt-atttatgcatatt---atgacttgatgaaaggag 26385539  T
Q  227 tgaccaaaagtggaggaatctgaaatt 253  Q
     ||||||||||||| |||| |||||||    
T  26385540 agaccaaaagtggaagaatatgaaatt 26385566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 28 - 211
Target Start/End: Original strand, 33714553 - 33714736
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || | || |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||  || |||||||||||||    
T  33714553 gatttagattttgtccttgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggac 33714652  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgtt 211  Q
    ||||||||||||||| ||||||||||  ||||||||||| ||||||| |||||||||| | |||||||||||||||||| ||||    
T  33714653 caaaagtggaggaatctgaaattacagagaccaaaagtgagaggaatctgaaattacaaggacgtaatttatgcagattctgtt 33714736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 36 - 256
Target Start/End: Original strand, 2299385 - 2299604
Alignment:
Q  36 tttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagtg 135  Q
    |||||| |||| ||||||| |||||| ||||||| |||||||||||||||| ||||||||||| || |||||||  || |||||||||||||||||||||    
T  2299385 tttagtccctgtaatttca-attcttccacttttagtccctcattccaccacgtaagcagaatatgtatacatggcacgtaaaatgagggaccaaaagtg 2299483  T
Q  136 gaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaa 234  Q
    | ||||| | ||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||| ||||||| |||||||||||  ||  |||    
T  2299484 gcggaatctaaaattacaaggaccaaaagtgggaggaatctgaaa-tacagggacgtaatttatgcagattctgttgacttgatgaaaggagggataaaa 2299582  T
Q  235 agtggaggaatctgaaattaca 256  Q
    |||||| |||||||||||||||    
T  2299583 agtggaagaatctgaaattaca 2299604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 9481494 - 9481265
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || | || ||||||| |||||| |||||||||||||| ||||||||| || |||| ||| ||||||||||  ||  ||||||||||||    
T  9481494 gatttagattttgtccttgtaatttcagattcttccacttttggtcccttattccaccacgtcagcaaaatttgcatacatggcacgcaaaatgagggac 9481395  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
     |||| ||||||||| |||||||||| ||||||||| | |||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||     
T  9481394 aaaaaatggaggaatttgaaattacagggaccaaaactaggaggaatctgaaattacaggaacgtaatttatgcagattctgctgacgtgatgaaaggag 9481295  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     |||||||| |||| |||| ||||||||||    
T  9481294 ggaccaaaattggaagaatatgaaattaca 9481265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 29 - 256
Target Start/End: Complemental strand, 30618272 - 30618045
Alignment:
Q  29 atttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggacc 128  Q
    |||||||||| || |||| ||||| | |||||| ||||||| ||| || ||||||||| || |||||||||| ||||||||  || ||||||||||||||    
T  30618272 atttagattttgtccctgtaattttagattcttccactttttgtctcttattccaccacgtcagcagaatctacatacatggcacgtaaaatgagggacc 30618173  T
Q  129 aaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-t 227  Q
    |||||||||||||| ||||||||||  || ||||||||||| |||| |||||||||||| |||||||||||||||||| || ||||||||| ||||||      
T  30618172 aaaagtggaggaatttgaaattacagtgatcaaaagtggga-gaatctgaaattacagggacgtaatttatgcagattctgctgacgtgataaaaggagg 30618074  T
Q  228 gaccaaaagtggaggaatctgaaattaca 256  Q
    |||||||||||||  ||| ||||||||||    
T  30618073 gaccaaaagtggaacaatatgaaattaca 30618045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 48 - 256
Target Start/End: Original strand, 30458987 - 30459196
Alignment:
Q  48 aatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaa 147  Q
    ||||||| ||||||  |||||| ||| |||||| ||||| || |||||||||||||||||||| || ||||||||| || |||||||| |  ||| ||||    
T  30458987 aatttcagattcttcaacttttagtctctcatttcaccacgtcagcagaatctgcatacatgacacgtaaaatgagagatcaaaagtgaaataatctgaa 30459086  T
Q  148 attacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggaggaatc 246  Q
    ||||||||||||||||||||||||||| |||||||| ||| |||||||||||| ||||| || | ||||||||||||||  ||||||||||| | |||||    
T  30459087 attacaaggaccaaaagtgggaggaatttgaaattatagggacgtaatttatggagattatgctaacgtgatgaaaggagagaccaaaagtgaaagaatc 30459186  T
Q  247 tgaaattaca 256  Q
    ||||||||||    
T  30459187 tgaaattaca 30459196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 43 - 256
Target Start/End: Original strand, 10321811 - 10322026
Alignment:
Q  43 cctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagt-ggaggaa 141  Q
    |||| |||||||||||||| |||||||| ||||||||| ||||| || ||||| |||||||||||||  || |||||| |||| | |||| | |||| ||    
T  10321811 cctgtaatttcatattcttacacttttgctccctcatttcaccacgtcagcagtatctgcatacatggcacgtaaaataaggggctaaaaattggagtaa 10321910  T
Q  142 tatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagg-atgaccaaaagtgga 240  Q
    | |||||||||| | |||||||||||||||||| |||||||||| | |||||||||||||||||| || ||||||||||||||| | ||||||||||| |    
T  10321911 tctgaaattacatgaaccaaaagtgggaggaatctgaaattacaaggacgtaatttatgcagattctgctgacgtgatgaaaggaaggaccaaaagtgaa 10322010  T
Q  241 ggaatctgaaattaca 256  Q
     |||||||||||||||    
T  10322011 agaatctgaaattaca 10322026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 28 - 167
Target Start/End: Original strand, 18500380 - 18500520
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||    
T  18500380 gatttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggac 18500479  T
Q  128 caaaagtggaggaatat-gaaattacaaggaccaaaagtgg 167  Q
    ||||||||||||||| |  |||||||| |||||||||||||    
T  18500480 caaaagtggaggaatctaaaaattacagggaccaaaagtgg 18500520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 48 - 206
Target Start/End: Original strand, 14680968 - 14681126
Alignment:
Q  48 aatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaa 147  Q
    |||||||||||||| |||||||||||| ||||| ||||| || |||||||||||||||||||| || | ||| ||| |||||||||||||| ||| ||||    
T  14680968 aatttcatattcttccacttttggtccttcatttcaccacgtcagcagaatctgcatacatgacacgtgaaaagagagaccaaaagtggagaaatctgaa 14681067  T
Q  148 attacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagatt 206  Q
    |||| | |||||||||||| ||| ||| |||||||||||| ||||||| | ||||||||    
T  14681068 attatatggaccaaaagtgagagtaatctgaaattacagggacgtaatatgtgcagatt 14681126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 43 - 158
Target Start/End: Complemental strand, 33637825 - 33637709
Alignment:
Q  43 cctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagt-ggaggaa 141  Q
    |||| ||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||| | || |||||||||||||||||||| |||||||    
T  33637825 cctgtaatttcatattctttcacttttgatccctcattccaccacgtcagcagaatctgcatacataacacgtaaaatgagggaccaaaagtgggaggaa 33637726  T
Q  142 tatgaaattacaaggac 158  Q
    | |||||||||| ||||    
T  33637725 tctgaaattacagggac 33637709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 32017622 - 32017727
Alignment:
Q  48 aatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaa 147  Q
    ||||||| |||||| |||||||||||| | ||||||||| || |||||||||||||||||||| || |||||||||||||||||||||||||||| ||||    
T  32017622 aatttcagattcttccacttttggtcctttattccaccacgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatttgaa 32017721  T
Q  148 attaca 153  Q
    ||||||    
T  32017722 attaca 32017727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 17142798 - 17142930
Alignment:
Q  122 agggaccaaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatga 221  Q
    ||||||||||||||||||||| |||||||||| |||||||||||| ||||||| |||||||||||| || |||||||| |||| | | |||||||| | |    
T  17142798 agggaccaaaagtggaggaatctgaaattacagggaccaaaagtgagaggaatctgaaattacagggacctaatttatacagaatctattgacgtggtta 17142897  T
Q  222 aaggatgaccaaaagtggaggaatctgaaatta 254  Q
    ||  | |||||||||||||| ||| ||||||||    
T  17142898 aaaaaggaccaaaagtggagaaatatgaaatta 17142930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 122 - 255
Target Start/End: Original strand, 18500506 - 18500641
Alignment:
Q  122 agggaccaaaagtggaggaatatgaaa-ttacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatg 220  Q
    ||||||||||||||||||||| | ||| ||||| ||||||||||||| | | || |||||||||||| || ||||||||||||||| ||||| | |||||    
T  18500506 agggaccaaaagtggaggaatctaaaaattacagggaccaaaagtggaaaggatctgaaattacagggacataatttatgcagattctgttgccttgatg 18500605  T
Q  221 aaagga-tgaccaaaagtggaggaatctgaaattac 255  Q
    ||||||  ||||||||||||| |||||| |||||||    
T  18500606 aaaggagggaccaaaagtggaagaatctaaaattac 18500641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 256
Target Start/End: Complemental strand, 33637744 - 33637642
Alignment:
Q  155 ggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggaggaatctgaaatt 253  Q
    |||||||||||||||||||| |||||||||||| ||||||| |||||||||| || |||||| |||||||||  ||||||||||||| |||||| |||||    
T  33637744 ggaccaaaagtgggaggaatctgaaattacagggacgtaatctatgcagattctgctgacgtaatgaaaggagggaccaaaagtggaagaatctaaaatt 33637645  T
Q  254 aca 256  Q
    |||    
T  33637644 aca 33637642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 256
Target Start/End: Original strand, 32017698 - 32017799
Alignment:
Q  155 ggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggaggaatctgaaatt 253  Q
    ||||||||||||| |||||| |||||||||||| | |||||||||||| |||  | ||||||||||||||||  ||||||||||||| |||| |||||||    
T  32017698 ggaccaaaagtgg-aggaatttgaaattacagggatgtaatttatgcatattccgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaatt 32017796  T
Q  254 aca 256  Q
    |||    
T  32017797 aca 32017799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 9854198 - 9854118
Alignment:
Q  29 atttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatg 109  Q
    |||||||||| || | || |||||||||||||| |||||||||||||||||| ||||| || |||| ||||||||||||||    
T  9854198 atttagattttgtccttgtaatttcatattcttccacttttggtccctcatttcaccacgtcagcaaaatctgcatacatg 9854118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 9854146 - 9854187
Alignment:
Q  117 aaatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  9854146 aaatgagggaccaaaagtggaagaatatgaaattacaaggac 9854187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 33714605 - 33714565
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  33714605 aatgagggaccaaaagtggaagaatatgaaattacaaggac 33714565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 9481248 - 9481325
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    ||||||||||  || |||| |||||||||||||| || |||||||||||| || || || || |||||||||||||||    
T  9481248 gatttagattatgtccctgtaatttcatattcttccaattttggtccctcctttcatcacgtcagcagaatctgcata 9481325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 32017816 - 32017767
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctc 77  Q
    ||||||||||| || |||| |||||||||||||| |||||||||||||||    
T  32017816 gatttagattttgtccctgtaatttcatattcttccacttttggtccctc 32017767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 18500432 - 18500392
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  18500432 aatgagggaccaaaagtggaagaatatgaaattacagggac 18500392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 24732198 - 24732238
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  24732198 aatgagggaccaaaagtggaagaatatgaaattacatggac 24732238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 30618029 - 30618105
Alignment:
Q  29 atttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    |||||||||| || |||| ||||||||||| || ||||||||||||||| ||  | || || |||||||||||||||    
T  30618029 atttagattttgtccctgtaatttcatattgttccacttttggtccctccttttatcacgtcagcagaatctgcata 30618105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 10322028 - 10321966
Alignment:
Q  43 cctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    |||| ||||||| ||||||||||||||||||| || || || || || |||||||||||||||    
T  10322028 cctgtaatttcagattctttcacttttggtccttcctttcatcacgtcagcagaatctgcata 10321966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 154
Target Start/End: Complemental strand, 14681001 - 14680964
Alignment:
Q  117 aaatgagggaccaaaagtggaggaatatgaaattacaa 154  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  14681001 aaatgaaggaccaaaagtggaagaatatgaaattacaa 14680964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 19284195 - 19284244
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctc 77  Q
    ||||||||||| || |||| ||||||| |||||| |||||||||||||||    
T  19284195 gatttagattttgtccctgtaatttcagattcttccacttttggtccctc 19284244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 19284261 - 19284212
Alignment:
Q  208 tgttgacgtgatgaaaggatg-accaaaagtggaggaatctgaaattaca 256  Q
    ||||||| ||||||||||| | |||||||||||| |||||||||||||||    
T  19284261 tgttgacatgatgaaaggagggaccaaaagtggaagaatctgaaattaca 19284212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 26385586 - 26385541
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtc 73  Q
    ||||||||| | || ||||||||||||||||||| |||||||||||    
T  26385586 gatttagatgttgttcctgcaatttcatattcttccacttttggtc 26385541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 158
Target Start/End: Original strand, 32017767 - 32017804
Alignment:
Q  121 gagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  32017767 gagggaccaaaagtggaagaatatgaaattacagggac 32017804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Original strand, 9481446 - 9481482
Alignment:
Q  122 agggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||| |||| |||||||||||||||    
T  9481446 agggaccaaaagtggaagaatctgaaattacaaggac 9481482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 256
Target Start/End: Original strand, 9854122 - 9854182
Alignment:
Q  197 tatgcagattttgttgacgtgatgaaaggatg-accaaaagtggaggaatctgaaattaca 256  Q
    ||||||||||||| ||||||| ||||| || | |||||||||||| |||| ||||||||||    
T  9854122 tatgcagattttgctgacgtggtgaaatgagggaccaaaagtggaagaatatgaaattaca 9854182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 228 - 256
Target Start/End: Original strand, 17142801 - 17142829
Alignment:
Q  228 gaccaaaagtggaggaatctgaaattaca 256  Q
    |||||||||||||||||||||||||||||    
T  17142801 gaccaaaagtggaggaatctgaaattaca 17142829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 26385396 - 26385356
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||||||| |||||| |||||||| ||||    
T  26385396 aatgagggaccaaaagtggaagaatataaaattacagggac 26385356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 228 - 256
Target Start/End: Original strand, 26385441 - 26385469
Alignment:
Q  228 gaccaaaagtggaggaatctgaaattaca 256  Q
    |||||||||||||||||||||||||||||    
T  26385441 gaccaaaagtggaggaatctgaaattaca 26385469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 30618084 - 30618040
Alignment:
Q  114 ataaaatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||| |||||||||||||||||  |||||||||||||| ||||    
T  30618084 ataaaaggagggaccaaaagtggaacaatatgaaattacagggac 30618040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 228 - 256
Target Start/End: Original strand, 33714650 - 33714678
Alignment:
Q  228 gaccaaaagtggaggaatctgaaattaca 256  Q
    |||||||||||||||||||||||||||||    
T  33714650 gaccaaaagtggaggaatctgaaattaca 33714678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 3e-72; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 22263257 - 22263486
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| |||||||||||||| |||||||||||||| ||||||||| || |||||||||||||||||||  || |||||||||||||    
T  22263257 gatttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggac 22263356  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| |||||||||| ||||||||| | |||||||| |||||||||||| |||||||||||||||||| || ||||||||||||||||     
T  22263357 caaaagtggaggaatttgaaattacagggaccaaaactaggaggaatctgaaattacagggacgtaatttatgcagattatgctgacgtgatgaaaggag 22263456  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||||| |||| ||||||||||    
T  22263457 ggaccaaaagtggaagaatatgaaattaca 22263486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 28 - 254
Target Start/End: Original strand, 26560620 - 26560847
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    |||||||||||||| |||| ||||||| |||||| |||||||||||||| ||||||||| || |||||||||||||||||||  || ||||||||||||     
T  26560620 gatttagatttagtccctgtaatttcagattcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggat 26560719  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| |||||||||| ||| |||||||||||||||| |||||||||||| |||||||||||||||||| || ||||||||||||||||     
T  26560720 caaaagtggaggaatttgaaattacagggatcaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggag 26560819  T
Q  227 tgaccaaaagtggaggaatctgaaatta 254  Q
     ||||||||||||| |||| ||||||||    
T  26560820 agaccaaaagtggaagaatatgaaatta 26560847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 43 - 256
Target Start/End: Complemental strand, 39878399 - 39878185
Alignment:
Q  43 cctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaat 142  Q
    |||| ||||||| ||| ||||||||||||||||||||| ||||| |  ||||||||||||||| |||| || |||||||||||||||||||||||| |||    
T  39878399 cctgtaatttcagattttttcacttttggtccctcatttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaat 39878300  T
Q  143 atgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggag 241  Q
     |||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||| ||||||||||||||     
T  39878299 ctgaaattagagggaccaaaagtgggaggaatatgaaattacagggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaa 39878200  T
Q  242 gaatctgaaattaca 256  Q
    |||||||||||||||    
T  39878199 gaatctgaaattaca 39878185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 23806264 - 23806035
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| |||||||||||||| |||||||||||||||||||||||| || |||| ||| ||||||||||  || |||||||||||||    
T  23806264 gatttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtcagcaaaatttgcatacatggcacgtaaaatgagggac 23806165  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| |||||||| | |||||||||||||||||||| |||||||||||| ||||||||||||| |||| || ||||||||||||||||     
T  23806164 caaaagtggaggaatctgaaattatagggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcggattctgctgacgtgatgaaaggag 23806065  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||||| |||||| ||||||||    
T  23806064 ggaccaaaagtggaagaatctaaaattaca 23806035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 17463403 - 17463174
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| |||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||  |  |||||||||||||    
T  17463403 gatttagattttgtccctgtaattgcatattcttccacttttgatccctcattccaccatgtaagcagaatctgcatacatggcatgtaaaatgagggac 17463304  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||| | ||||||| | |||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||| |||||||| ||     
T  17463303 caaaattagaggaatctaaaattacagggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgttgacttgatgaaatgag 17463204  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||||  ||| |||||||||||    
T  17463203 ggaccaaaagtgggagaacctgaaattaca 17463174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 17850652 - 17850881
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| ||  ||| ||||| | |||||| |||||||| ||||||||||||||| || |||||||||||||||||||  || ||||||||||||     
T  17850652 gatttagattttgtctctgtaatttaagattcttccacttttgatccctcattccaccacgtcagcagaatctgcatacatggtacctaaaatgagggat 17850751  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| |||||||| | | |||||||||||||||||| |||||||||| | |||||||| |||||||||||| ||||||||||||| ||     
T  17850752 caaaagtggaggaatctgaaattaaaggaaccaaaagtgggaggaatctgaaattacaaggacgtaattgatgcagattttgctgacgtgatgaaaagag 17850851  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||||| |||||||||||||||    
T  17850852 ggaccaaaagtggaagaatctgaaattaca 17850881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 26136129 - 26135900
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| ||   || |||||||||||||| |||||||| || ||| ||||| || ||||||||||||||||||||||  || |||||| ||||||    
T  26136129 gatttagattttgtcattgtaatttcatattcttccacttttgatctctcgttccatcacgtaagcagaatctgcatacatggtacgtaaaataagggac 26136030  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| | ||||||||||||||||||||| ||||||| |||||||||| | |||||||||||||||||| ||||||| |||||||||||     
T  26136029 caaaagtggaggaatctaaaattacaaggaccaaaagtgagaggaatctgaaattacaaggacgtaatttatgcagattctgttgacttgatgaaaggag 26135930  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     |||||||||| || |||||||||||||||    
T  26135929 ggaccaaaagtagaagaatctgaaattaca 26135900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 29 - 256
Target Start/End: Complemental strand, 15106378 - 15106150
Alignment:
Q  29 atttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggacc 128  Q
    |||||||||| || |||| ||||||| |||||| |||||||| ||||||||||||||| || |||| ||||||||||||||  || |||||||||||| |    
T  15106378 atttagattttgtccctgtaatttcagattcttccacttttgatccctcattccaccacgtcagcaaaatctgcatacatggcacgtaaaatgagggatc 15106279  T
Q  129 aaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-t 227  Q
    |||||||||||||| |||||||||| |||||||||||||||||||| |||||||||| | || ||||| |||||||||| | ||||||||||||||||      
T  15106278 aaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacaaggacttaattgatgcagatttagctgacgtgatgaaaggagg 15106179  T
Q  228 gaccaaaagtggaggaatctgaaattaca 256  Q
    |||||||||||||  ||||| ||||||||    
T  15106178 gaccaaaagtggaataatctaaaattaca 15106150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 31 - 256
Target Start/End: Original strand, 42670788 - 42671014
Alignment:
Q  31 ttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaa 130  Q
    |||||||| || | || |||||||||||||| |||||||||||||| ||||||||| || |||| ||| ||| ||||||  || ||||||||||||||||    
T  42670788 ttagattttgtccttgtaatttcatattcttccacttttggtcccttattccaccacgtcagcaaaatttgcttacatggcacgtaaaatgagggaccaa 42670887  T
Q  131 aagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tga 229  Q
    || ||||||||| |||||||||| ||||||||| | |||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||  ||    
T  42670888 aaatggaggaatttgaaattacagggaccaaaactaggaggaatctgaaattacaggaacgtaatttatgcagattctgctgacgtgatgaaaggaggga 42670987  T
Q  230 ccaaaagtggaggaatctgaaattaca 256  Q
    |||||||||||  ||| ||||||||||    
T  42670988 ccaaaagtggaaaaatatgaaattaca 42671014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 43 - 256
Target Start/End: Original strand, 13284489 - 13284703
Alignment:
Q  43 cctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaat 142  Q
    |||| |||||||||||||| ||||||| |||||||||| ||||| |  | |||||||||||||||||| || | ||||||||||||||||||| || |||    
T  13284489 cctgtaatttcatattcttccacttttagtccctcatttcaccacgacaacagaatctgcatacatgacacgtgaaatgagggaccaaaagtgaagaaat 13284588  T
Q  143 atgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggag 241  Q
    ||||||||||| |||||||||||||||||||| | |||||||| | |||||||||||| ||||| |||||||||| | ||| ||  ||||||||||||||    
T  13284589 atgaaattacagggaccaaaagtgggaggaatcttaaattacaaggacgtaatttatgtagattctgttgacgtggttaaatgagggaccaaaagtggag 13284688  T
Q  242 gaatctgaaattaca 256  Q
    |||||||||||||||    
T  13284689 gaatctgaaattaca 13284703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 48 - 256
Target Start/End: Complemental strand, 19251762 - 19251553
Alignment:
Q  48 aatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaa 147  Q
    |||||||||||||| |||||| ||||||||||| ||||| || |||||||||||||||||||  || |||||||| ||||||||||||||||||||||||    
T  19251762 aatttcatattcttccactttcggtccctcatttcaccacgtcagcagaatctgcatacatggcacgtaaaatgatggaccaaaagtggaggaatatgaa 19251663  T
Q  148 attacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggaggaatc 246  Q
    |||||| ||| ||||||| |||||||| |||||||||| |||| ||||||||| | ||| || ||| ||||||||||||  ||||||||||||| ||||     
T  19251662 attacagggatcaaaagttggaggaatttgaaattacaagaacataatttatgtatattctgctgatgtgatgaaaggagggaccaaaagtggaagaata 19251563  T
Q  247 tgaaattaca 256  Q
    ||||||||||    
T  19251562 tgaaattaca 19251553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 28 - 252
Target Start/End: Complemental strand, 20499057 - 20498832
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| ||||||| ||||||||||||||||||| ||||| |||||  | ||||||||||||||||||   || ||||||||||||     
T  20499057 gatttagattttgtccctgtaatttcagattctttcacttttggtccttcatttcaccacatcagcagaatctgcatacatagcacgtaaaatgagggat 20498958  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    |||||||||||  || |||||||||| ||||||||||||||||||||||||||||| |   |||||||||||||||||| |  ||||||||| ||||||     
T  20498957 caaaagtggagtgatctgaaattacagggaccaaaagtgggaggaatatgaaattatattgacgtaatttatgcagattctactgacgtgataaaaggag 20498858  T
Q  227 tgaccaaaagtggaggaatctgaaat 252  Q
     ||||||||||||| |||||||||||    
T  20498857 ggaccaaaagtggaagaatctgaaat 20498832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 94 - 256
Target Start/End: Original strand, 23854798 - 23854961
Alignment:
Q  94 agaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgta 193  Q
    ||||||||||||||||  || |||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||| |||||||||||| |||||    
T  23854798 agaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggatcaaaagtgggaggaatctgaaattacagggacgta 23854897  T
Q  194 atttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggaggaatctgaaattaca 256  Q
    ||||||||||||| || ||||||||||||||||  ||||||||||||| |||| | ||||||||    
T  23854898 atttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatataaaattaca 23854961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 48 - 256
Target Start/End: Complemental strand, 33290341 - 33290132
Alignment:
Q  48 aatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaa 147  Q
    |||||||||||||| |||||||||||||| ||| ||||| || |  | ||||||||||||||   ||| ||||||||||||||||||||||| || ||||    
T  33290341 aatttcatattcttccacttttggtccctaatttcaccacgtcaaaaaaatctgcatacatggctcatgaaatgagggaccaaaagtggaggtatctgaa 33290242  T
Q  148 attacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggaggaatc 246  Q
    |||||| |||||||||| ||||||||| |||||||||||| ||| |||||||||||||| || ||||||| | |||  |  |||||||||||||||| |     
T  33290241 attacagggaccaaaagggggaggaatctgaaattacagggacgaaatttatgcagattctgctgacgtggttaaataagggaccaaaagtggaggagta 33290142  T
Q  247 tgaaattaca 256  Q
    ||||||||||    
T  33290141 tgaaattaca 33290132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 28 - 158
Target Start/End: Complemental strand, 26236407 - 26236277
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| ||||||| |||||| || ||||||||||||||||||||| ||||||||||||||||||||||  || |||||||||||||    
T  26236407 gatttagattttgtccctgtaatttcagattcttccatttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggac 26236308  T
Q  128 caaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||||||||||||| ||||    
T  26236307 caaaagtggaggaatatgaaattacagggac 26236277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 30390528 - 30390655
Alignment:
Q  31 ttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaa 130  Q
    |||||||| || |||| |||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||   || ||||||||||||||||    
T  30390528 ttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtaagcaaaatctgcatacatagcacgtaaaatgagggaccaa 30390627  T
Q  131 aagtggaggaatatgaaattacaaggac 158  Q
    || || |||||| |||||||||| ||||    
T  30390628 aaatgaaggaatctgaaattacagggac 30390655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 256
Target Start/End: Complemental strand, 26236311 - 26236210
Alignment:
Q  155 ggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggaggaatctgaaatt 253  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||| ||| || ||||||||||||||||  ||||||||||| | ||||||||||||    
T  26236311 ggaccaaaagtgg-aggaatatgaaattacagggacgtaatttatgcaaattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatctgaaatt 26236213  T
Q  254 aca 256  Q
    |||    
T  26236212 aca 26236210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 144
Target Start/End: Complemental strand, 13254733 - 13254632
Alignment:
Q  43 cctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaat 142  Q
    |||| ||||||| |||||| |||||||||||||||||| |||||  ||||||||||| | |||||||| || |||||||||||||||||||||||| |||    
T  13254733 cctgtaatttcagattcttccacttttggtccctcatttcaccacataagcagaatcagtatacatgacacgtaaaatgagggaccaaaagtggagaaat 13254634  T
Q  143 at 144  Q
    ||    
T  13254633 at 13254632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 13284667 - 13284708
Alignment:
Q  117 aaatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  13284667 aaatgagggaccaaaagtggaggaatctgaaattacaaggac 13284708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 13254633 - 13254580
Alignment:
Q  204 attttgttgacgtgatgaaaggatg-accaaaagtggaggaatctgaaattaca 256  Q
    ||||||||||||||||||||||| | |||||||||| | |||||||||||||||    
T  13254633 attttgttgacgtgatgaaaggaggaaccaaaagtgaaagaatctgaaattaca 13254580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 19251536 - 19251585
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctc 77  Q
    ||||||||||| || |||| |||||||||||||| |||||||||||||||    
T  19251536 gatttagattttgtccctgtaatttcatattcttccacttttggtccctc 19251585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 19251729 - 19251770
Alignment:
Q  117 aaatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  19251729 aaatgagggaccgaaagtggaagaatatgaaattacaaggac 19251770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 22263503 - 22263426
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    |||| |||||| || |||| |||||||||||||| ||||||||||||||| || || || || |||| ||||||||||    
T  22263503 gattcagattttgtccctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcataatctgcata 22263426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 26236193 - 26236270
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    |||||| |||| || |||| ||||||| |||||||||||||||||||||| || || || || |||||||| ||||||    
T  26236193 gatttatattttgtccctgtaatttcagattctttcacttttggtccctcctttcatcacgtcagcagaatttgcata 26236270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 33290168 - 33290127
Alignment:
Q  117 aaatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||| ||||||||||||||||||| |||||||||||||||||    
T  33290168 aaataagggaccaaaagtggaggagtatgaaattacaaggac 33290127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 42671031 - 42670954
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    ||||||||||  || |||| ||||||||||| || ||||||||||||||| || || || || |||||||||||||||    
T  42671031 gatttagattatgtccctgtaatttcatatttttccacttttggtccctcctttcatcacgtcagcagaatctgcata 42670954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 23806212 - 23806252
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  23806212 aatgagggaccaaaagtggaagaatatgaaattacagggac 23806252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 23854977 - 23854901
Alignment:
Q  29 atttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    |||||||||| ||  ||| ||||| |||||||| ||||||||||||||| || || || || |||||||||||||||    
T  23854977 atttagattttgtctctgtaattttatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcata 23854901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 30390577 - 30390537
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  30390577 aatgagggaccaaaagtggaagaatatgaaattacagggac 30390537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 158
Target Start/End: Complemental strand, 42670833 - 42670797
Alignment:
Q  122 agggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||| ||||||||||||||||||||    
T  42670833 agggaccaaaagtggaagaatatgaaattacaaggac 42670797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 156
Target Start/End: Original strand, 33290308 - 33290347
Alignment:
Q  117 aaatgagggaccaaaagtggaggaatatgaaattacaagg 156  Q
    |||| |||||||||||||||| ||||||||||||||||||    
T  33290308 aaattagggaccaaaagtggaagaatatgaaattacaagg 33290347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 17850896 - 17850822
Alignment:
Q  30 tttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcat 104  Q
    ||||||||| || |||| ||||||| |||||| ||||||||||||||| || || || || |||| |||||||||    
T  17850896 tttagattttgtccctgtaatttcagattcttccacttttggtccctcttttcatcacgtcagcaaaatctgcat 17850822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 13284527 - 13284486
Alignment:
Q  117 aaatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    ||||||||||| ||||||||| ||||||||||||||| ||||    
T  13284527 aaatgagggactaaaagtggaagaatatgaaattacagggac 13284486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 158
Target Start/End: Complemental strand, 19251585 - 19251548
Alignment:
Q  121 gagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  19251585 gagggaccaaaagtggaagaatatgaaattacagggac 19251548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 158
Target Start/End: Original strand, 22263454 - 22263491
Alignment:
Q  121 gagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  22263454 gagggaccaaaagtggaagaatatgaaattacagggac 22263491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 26135883 - 26135960
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    ||||||||||| || |||| ||||||| ||||||  |||||||||||||| || || || || | |||||||||||||    
T  26135883 gatttagattttgtccctgtaatttcagattcttctacttttggtccctcctttcatcaagtcaacagaatctgcata 26135960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 26560846 - 26560789
Alignment:
Q  48 aatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    |||||||||||||| ||||||||||| ||| || || || || |||||||||||||||    
T  26560846 aatttcatattcttccacttttggtctctcctttcatcacgtcagcagaatctgcata 26560789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 13254695 - 13254731
Alignment:
Q  117 aaatgagggaccaaaagtggaggaatatgaaattaca 153  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  13254695 aaatgagggaccaaaagtggaagaatctgaaattaca 13254731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Complemental strand, 22263305 - 22263269
Alignment:
Q  122 agggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  22263305 agggaccaaaagtggaagaatatgaaattacagggac 22263269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 138; Significance: 3e-72; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 30299543 - 30299314
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| ||||| | |||||| |||||||||||||||||||||||| ||||| ||||||||||||||||  ||||||||||||||||    
T  30299543 gatttagattttgtccctgtaattttagattcttccacttttggtccctcattccaccacgtaagaagaatctgcatacatggcacataaaatgagggac 30299444  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| |||||||||||| || ||||||||||||||| |||||||||||| |||||||||||| ||||| ||||||| |||||||||||     
T  30299443 caaaagtggaggaatctgaaattacaagaactaaaagtgggaggaatctgaaattacagggacgtaatttatggagattctgttgacttgatgaaaggag 30299344  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||||| |||| ||||||||||    
T  30299343 agaccaaaagtggaagaatatgaaattaca 30299314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 48 - 256
Target Start/End: Complemental strand, 13230023 - 13229815
Alignment:
Q  48 aatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaa 147  Q
    |||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| ||||    
T  13230023 aatttcatcttcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatgacacgcaaaatgagggaccaaaagtggaggaatctgaa 13229924  T
Q  148 attacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggaggaatc 246  Q
    ||||| ||||||||||||| ||||||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||| ||| |||||||||| ||||     
T  13229923 attac-aggaccaaaagtgagaggaatctgaaattacagggacgtaatttatgcagattatgttgacttgatgaaaggagtgatcaaaagtggaagaata 13229825  T
Q  247 tgaaattaca 256  Q
    ||||||||||    
T  13229824 tgaaattaca 13229815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 39711384 - 39711155
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || || | |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||  || |||||||||||||    
T  39711384 gatttagattttgtccccgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatttgcatacatggcacgtaaaatgagggac 39711285  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    |||||||||||||||  ||||||||| |||||||||| |||||||||||||||||||| | |||||||||||||||||| || ||||||||| ||||||     
T  39711284 caaaagtggaggaatccgaaattacagggaccaaaagcgggaggaatatgaaattacaaggacgtaatttatgcagattctgctgacgtgattaaaggag 39711185  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||||| |||| ||||||||||    
T  39711184 ggaccaaaagtggaagaatatgaaattaca 39711155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 39826116 - 39826341
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| ||||||| |||||| |||||||| ||||||||||||||| || |||||||||||||||||||  || ||||||||||||     
T  39826116 gatttagattttgtccctgtaatttcagattcttccacttttgatccctcattccaccacgttagcagaatctgcatacatggcacgtaaaatgagggat 39826215  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaaggat 227  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||| | |||||||| | |||||||| |||||||||||| ||||||||||||||       
T  39826216 caaaagtggaggaatatgaaattacagggatcaaaagtgggaggaatctaaaattacaaggacgtaattgatgcagattttgctgacgtgatgaaag--- 39826312  T
Q  228 gaccaaaagtggaggaatctgaaattaca 256  Q
    ||||||||||||| |||||||||||||||    
T  39826313 gaccaaaagtggaagaatctgaaattaca 39826341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 4907028 - 4907257
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| |||||||||||||| |||||||||||||||||||||||| || ||| |||||||||||||||  |  |||||||||||||    
T  4907028 gatttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtcagccgaatctgcatacatggcatgtaaaatgagggac 4907127  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
     ||||||||| |||| |||||||||| ||||||||||| |||||||| |||||||||||| |||||||||||||||||| |  ||||||||||||||||     
T  4907128 taaaagtggatgaatctgaaattacagggaccaaaagtaggaggaatctgaaattacagggacgtaatttatgcagattctactgacgtgatgaaaggag 4907227  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||||| |||||||||||||||    
T  4907228 ggaccaaaagtggaagaatctgaaattaca 4907257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 17606620 - 17606391
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || | || ||||||| |||||| |||||||||||||| ||||||||| || |||| ||| ||||||||||  || |||||||||||||    
T  17606620 gatttagattttgtccttgtaatttcagattcttccacttttggtcccttattccaccacgtcagcaaaatttgcatacatggcacgtaaaatgagggac 17606521  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||| || ||||||||||||| ||     
T  17606520 caaaagtggaggaatttgaaattacagggaccaaaagtgggaggaatatgaaattacagggacgtaatttatacagattctgctgacgtgatgaaatgag 17606421  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||||| |||| ||||||||||    
T  17606420 ggaccaaaagtggaagaatatgaaattaca 17606391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 33628756 - 33628985
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || || | ||||||| |||||||||||||||||||||||||||||||  |||||||||| ||||||||||  || |||||||||||||    
T  33628756 gatttagattttgtccccgtaatttcagattctttcacttttggtccctcattccaccacataagcagaatttgcatacatggcacgtaaaatgagggac 33628855  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||| ||||||| |||||||||| |||||||||| ||||||||| |||||||||||| || ||||||||| ||||| || ||||||||| ||||||     
T  33628856 caaaagtagaggaatctgaaattacagggaccaaaagcgggaggaatttgaaattacagggacataatttatgtagattctgctgacgtgattaaaggag 33628955  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||||| |||||||||||||||    
T  33628956 ggaccaaaagtggaagaatctgaaattaca 33628985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 43 - 256
Target Start/End: Original strand, 52058092 - 52058303
Alignment:
Q  43 cctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaat 142  Q
    |||| ||||||| |||||| |||||||||||||||||| |||||  | |||||||||||||||||||| || |||||||||||||||||||||||| |||    
T  52058092 cctgtaatttcagattcttccacttttggtccctcatttcaccacatcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggagtaat 52058191  T
Q  143 atgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggag 241  Q
    |||||||||||||||||||||||||||||||| |||||| | ||| ||||||||||||||||||    ||||||||||||||||  |||||||||||||     
T  52058192 atgaaattacaaggaccaaaagtgggaggaatctgaaatcatagggacgtaatttatgcagatt---ctgacgtgatgaaaggagggaccaaaagtggaa 52058288  T
Q  242 gaatctgaaattaca 256  Q
    |||||||||||||||    
T  52058289 gaatctgaaattaca 52058303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 20995980 - 20995752
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| ||  ||| |||||||||||||| |||||||||||||| ||||||||| || |||||||||||||||||||  || |||| ||||||||    
T  20995980 gatttagattttgtctctgtaatttcatattcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaa-tgagggac 20995882  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||| ||| |||||||||| |||| ||||||||||||||| |||||||||||| |||||||||||||||||| || |||||||||||||| |     
T  20995881 caaaagtggagaaatttgaaattacagggacgaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaagaag 20995782  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||| | |||| | ||||||||    
T  20995781 ggaccaaaagtgaaagaatataaaattaca 20995752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 24467939 - 24467711
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| ||||||| |||||| |||||||||||||||||| ||||| || || ||||||||||||||||  || |||||||||| ||    
T  24467939 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcaccacgtcagtagaatctgcatacatggcacgtaaaatgagg-ac 24467841  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    |||| |||||| ||| |||||||||| |||||||||||||||||||||||||||||||   |||||||||||||||||| |  |||| |||||||||||     
T  24467840 caaatgtggagtaatctgaaattacagggaccaaaagtgggaggaatatgaaattacaatgacgtaatttatgcagattctaatgacttgatgaaaggag 24467741  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||||| |||||||||||||||    
T  24467740 ggaccaaaagtggaagaatctgaaattaca 24467711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 29 - 256
Target Start/End: Complemental strand, 48072272 - 48072044
Alignment:
Q  29 atttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggacc 128  Q
    |||||||||  || |||| |||||||||||||| |||||||||  ||||||| ||||| || |||||||||||||||||||  || ||||||||||||||    
T  48072272 atttagattatgtccctgtaatttcatattcttccacttttgggtcctcatttcaccacgtcagcagaatctgcatacatgtcacgtaaaatgagggacc 48072173  T
Q  129 aaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-t 227  Q
    |||||||||||||| |||||||||| ||| |||||||||||||||| |||||||||||| |||||||||||||| ||| || ||| ||||||||||||      
T  48072172 aaaagtggaggaatctgaaattacagggatcaaaagtgggaggaatttgaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagg 48072073  T
Q  228 gaccaaaagtggaggaatctgaaattaca 256  Q
    || ||||||||||  ||| ||||||||||    
T  48072072 gagcaaaagtggaataatatgaaattaca 48072044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 28 - 253
Target Start/End: Complemental strand, 8293119 - 8292890
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| |||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||  |   ||||||||||||    
T  8293119 gatttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccatgtcagccgaatctgcatacatggcatgaaaaatgagggac 8293020  T
Q  128 caa---aagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaag 224  Q
     ||   |||||||||||| | |||||||| ||||||||||| |||||||| |||||||||||| |||||||||||||||||| || |||||||||||||     
T  8293019 taattaaagtggaggaatctaaaattacatggaccaaaagtaggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaa 8292920  T
Q  225 gatg-accaaaagtggaggaatctgaaatt 253  Q
    || | |||||||||||| |||| |||||||    
T  8292919 gaggaaccaaaagtggaagaatatgaaatt 8292890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 42510081 - 42510275
Alignment:
Q  29 atttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggacc 128  Q
    |||||||||| || |||| |||||||||||||| ||||||| |||||||||| |||||  | |||||||||||||||||||  || | ||||||||||||    
T  42510081 atttagattttgtccctgtaatttcatattcttccacttttagtccctcatttcaccacatcagcagaatctgcatacatggcacgtgaaatgagggacc 42510180  T
Q  129 aaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaa 223  Q
    |||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||   |||||||||||||||| || |||||||||||||    
T  42510181 aaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacaggggtgtaatttatgcagattctgctgacgtgatgaaa 42510275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 48 - 240
Target Start/End: Complemental strand, 43539639 - 43539446
Alignment:
Q  48 aatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaa 147  Q
    ||||||| |||||| || ||||||||||| ||||||||| || ||| |||||||||||||||| || |||||||||| ||||||||||||||||| ||||    
T  43539639 aatttcaaattcttccagttttggtcccttattccaccacgtcagccgaatctgcatacatgacacgtaaaatgaggtaccaaaagtggaggaatttgaa 43539540  T
Q  148 attacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtgga 240  Q
    |||||| ||| |||||||||||||||| | |||||||||| |||||||||||||||||| || ||||||||||||||||  |||||||||||||    
T  43539539 attacagggagcaaaagtgggaggaatctaaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtgga 43539446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 31 - 255
Target Start/End: Complemental strand, 29696867 - 29696648
Alignment:
Q  31 ttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaa 130  Q
    |||||||| || | || ||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||| || |     ||||||||||||||||    
T  29696867 ttagattttgtccatgtaatttcagattcttccacttttggtccctcattccaccacgtaagcagaatctgcatgcacg-----taaaatgagggaccaa 29696773  T
Q  131 aagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tga 229  Q
    |||||||||||| ||||| |||| |||||||| |||||||||||||||||||| ||| || ||||||||||||||| ||  || |||||||||||| |||    
T  29696772 aagtggaggaatctgaaaatacagggaccaaa-gtgggaggaatatgaaattatagggacataatttatgcagattctgccgatgtgatgaaaggagtga 29696674  T
Q  230 ccaaaagtggaggaatctgaaattac 255  Q
    | ||||||||| |||| |||||||||    
T  29696673 caaaaagtggaagaatatgaaattac 29696648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 18462596 - 18462368
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || || | ||||||| |||||| ||||||||||| |||||| ||||| || | |||||||||||||||||  ||  ||||||||| ||    
T  18462596 gatttagattttgtccccgtaatttcagattcttccacttttggtctctcatttcaccacgtcaacagaatctgcatacatggcacgcaaaatgagg-ac 18462498  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    |||| |||||| |||||||||||| | |||||||||||||||||||||||||||||||   |||||||||||||||||| |  |||| |||||||||||     
T  18462497 caaacgtggagtaatatgaaattatagggaccaaaagtgggaggaatatgaaattacaatgacgtaatttatgcagattctaatgacttgatgaaaggag 18462398  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     |||||||| |||| |||||||||||||||    
T  18462397 ggaccaaaaatggaagaatctgaaattaca 18462368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 39970712 - 39970940
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| ||   || ||||||| |||||| |||||||||||||||||||||||| || |||| ||||||||||||||  || |||||||||||||    
T  39970712 gatttagattttgtctatgtaatttcagattcttccacttttggtccctcattccaccacgtcagcaaaatctgcatacatggcacgtaaaatgagggac 39970811  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    |||||||||| |||| ||||||||| | ||||||||||||||||||| | ||||| |||| ||  ||||||||| |||| || |||||||||||||| |     
T  39970812 caaaagtggatgaatctgaaattac-atgaccaaaagtgggaggaatctaaaatttcagggacacaatttatgcggattctgctgacgtgatgaaagaag 39970910  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||||| | |||| ||||||||    
T  39970911 ggaccaaaagtggaaggatctaaaattaca 39970940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 28 - 153
Target Start/End: Original strand, 34749203 - 34749328
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || || | |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||  |  |||||||||||||    
T  34749203 gatttagattttgtccccgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatttgcatacatggcatgtaaaatgagggac 34749302  T
Q  128 caaaagtggaggaatatgaaattaca 153  Q
    ||||||||||||||| ||||||||||    
T  34749303 caaaagtggaggaatctgaaattaca 34749328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 48 - 172
Target Start/End: Original strand, 7473878 - 7474002
Alignment:
Q  48 aatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaa 147  Q
    |||||||||||||| |||||||||||||||||| ||||| || |  ||||||||||||||||  || | |||||| ||| ||||||||||||||| ||||    
T  7473878 aatttcatattcttccacttttggtccctcatttcaccacgtcaaaagaatctgcatacatggcacgtgaaatgatggatcaaaagtggaggaatctgaa 7473977  T
Q  148 attacaaggaccaaaagtgggagga 172  Q
    |||||||||||||||||||||||||    
T  7473978 attacaaggaccaaaagtgggagga 7474002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 256
Target Start/End: Original strand, 34749299 - 34749400
Alignment:
Q  155 ggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaaggatg-accaaaagtggaggaatctgaaatt 253  Q
    ||||||||||||| |||||| |||||||||||| | |||||||||||||||| || ||||||||| |||||| | |||||||||||| ||||||||||||    
T  34749299 ggaccaaaagtgg-aggaatctgaaattacagggatgtaatttatgcagattctgctgacgtgattaaaggaggtaccaaaagtggaagaatctgaaatt 34749397  T
Q  254 aca 256  Q
    |||    
T  34749398 aca 34749400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 215044 - 215167
Alignment:
Q  94 agaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgta 193  Q
    |||||||||||| |||| || | ||||||  |||||||||||||||||| | |||||||| ||||| |||||| ||| ||| ||||||||||   |||||    
T  215044 agaatctgcatatatgacacgtgaaatgaatgaccaaaagtggaggaatcttaaattacacggaccgaaagtgagagaaatctgaaattacaatgacgta 215143  T
Q  194 atttatgcagattttgttgacgtg 217  Q
    |||||| || ||||||| ||||||    
T  215144 atttatacaaattttgtcgacgtg 215167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 17606374 - 17606447
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctg 101  Q
    ||||||||||| || |||| |||||||||||||| |||||||||||||||||| || || || |||||||||||    
T  17606374 gatttagattttgttcctgtaatttcatattcttccacttttggtccctcatttcatcacgtcagcagaatctg 17606447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 18342311 - 18342261
Alignment:
Q  48 aatttcatattctttcacttttggtccctcattccaccatgtaagcagaat 98  Q
    |||||||||||||| ||||||| |||||||||||||||| |||||||||||    
T  18342311 aatttcatattcttccacttttagtccctcattccaccacgtaagcagaat 18342261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 8292870 - 8292947
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    ||||||||||| || |||| |||||||||||||| |||||||||| |||| || || || || |||||||||||||||    
T  8292870 gatttagattttgtccctgaaatttcatattcttccacttttggttcctcttttcatcacgtcagcagaatctgcata 8292947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 16294206 - 16294247
Alignment:
Q  117 aaatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  16294206 aaataagggaccaaaagtggaggaatatgaaattacaaggac 16294247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 253
Target Start/End: Original strand, 30780270 - 30780356
Alignment:
Q  168 gaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtga-tgaaaggatgaccaaaagtggaggaatctgaaatt 253  Q
    ||||||||||||||||||   ||||||||||| |||||| || |||||||| |||| | | || ||||||||||||||| |||||||    
T  30780270 gaggaatatgaaattacaatgacgtaatttatacagattctgctgacgtgattgaatgaaggatcaaaagtggaggaatatgaaatt 30780356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 4907274 - 4907197
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    ||||||||||| || |||| ||||||| |||||| ||||||||||||||| || || || || || ||||||||||||    
T  4907274 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcacgtcagtagaatctgcata 4907197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 105
Target Start/End: Original strand, 20995743 - 20995812
Alignment:
Q  36 tttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    |||||| |||| ||||| |||||||||||||||||||||||  || || || || |||||||||||||||    
T  20995743 tttagtccctgtaattttatattctttcacttttggtcccttctttcatcacgtcagcagaatctgcata 20995812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 39711138 - 39711215
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    ||||||||||| || | || |||||||||||||| ||||||||||||||| ||  | || || |||||||||||||||    
T  39711138 gatttagattttgtccttgtaatttcatattcttccacttttggtccctcctttaatcacgtcagcagaatctgcata 39711215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 158
Target Start/End: Complemental strand, 39711187 - 39711150
Alignment:
Q  121 gagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  39711187 gagggaccaaaagtggaagaatatgaaattacaaggac 39711150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 43539413 - 43539490
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    ||||||||||| || |||| ||||| ||||| || ||||||||||||||| || || || || |||||||||||||||    
T  43539413 gatttagattttgtccctgtaattttatattgttccacttttggtccctcctttcatcacgtcagcagaatctgcata 43539490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 4907080 - 4907040
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  4907080 aatgagggaccaaaagtggaagaatatgaaattacagggac 4907040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 7473911 - 7473875
Alignment:
Q  117 aaatgagggaccaaaagtggaggaatatgaaattaca 153  Q
    ||||||||||||||||||||| |||||||||||||||    
T  7473911 aaatgagggaccaaaagtggaagaatatgaaattaca 7473875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 8293067 - 8293107
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  8293067 aatgagggaccaaaagtggaagaatatgaaattacagggac 8293107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 16294258 - 16294182
Alignment:
Q  29 atttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    |||||||||| || | || |||||||||||| | |||||||||||||| |||  ||||||| |||||||||| ||||    
T  16294258 atttagattttgtccttgtaatttcatattcctccacttttggtcccttatttaaccatgtcagcagaatctacata 16294182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 30252210 - 30252150
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatg 88  Q
    ||||||||||| || || | |||||||||||||| || ||||| |||||||||||||||||    
T  30252210 gatttagattttgtccccgtaatttcatattcttccatttttgatccctcattccaccatg 30252150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 18462519 - 18462578
Alignment:
Q  197 tatgcagattttgttgacgtgatgaaaggat-gaccaaaagtggaggaatctgaaattac 255  Q
    |||||||||| |||||||||| ||||| ||  ||||||||||||| ||||||||||||||    
T  18462519 tatgcagattctgttgacgtggtgaaatgagagaccaaaagtggaagaatctgaaattac 18462578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 152
Target Start/End: Complemental strand, 34749255 - 34749221
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattac 152  Q
    |||||||||||||||||||| ||||||||||||||    
T  34749255 aatgagggaccaaaagtggaagaatatgaaattac 34749221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 152
Target Start/End: Original strand, 39711332 - 39711366
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattac 152  Q
    |||||||||||||||||||| ||||||||||||||    
T  39711332 aatgagggaccaaaagtggaagaatatgaaattac 39711366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 118 - 155
Target Start/End: Original strand, 18342279 - 18342316
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaag 155  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  18342279 aatgagggactaaaagtggaagaatatgaaattacaag 18342316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 24467694 - 24467743
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctc 77  Q
    ||||||||||| || |||| ||||||| |||||| |||||||||||||||    
T  24467694 gatttagattttgtccctgtaatttcagattcttccacttttggtccctc 24467743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 24467886 - 24467927
Alignment:
Q  117 aaatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    ||||||||||||||||||||| |||| |||||||||| ||||    
T  24467886 aaatgagggaccaaaagtggaagaatctgaaattacagggac 24467927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 30299297 - 30299342
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtc 73  Q
    ||||||||||| || |||| |||||||||||||| |||||||||||    
T  30299297 gatttagattttgtccctgtaatttcatattcttccacttttggtc 30299342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 257
Target Start/End: Complemental strand, 39970789 - 39970728
Alignment:
Q  197 tatgcagattttgttgacgtgatgaaaggatg-accaaaagtggaggaatctgaaattacat 257  Q
    ||||||||||||| ||||||| || || || | |||||||||||| ||||||||||||||||    
T  39970789 tatgcagattttgctgacgtggtggaatgagggaccaaaagtggaagaatctgaaattacat 39970728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 42510133 - 42510092
Alignment:
Q  117 aaatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    ||||||||||| ||||||||| ||||||||||||||| ||||    
T  42510133 aaatgagggactaaaagtggaagaatatgaaattacagggac 42510092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 52058130 - 52058089
Alignment:
Q  117 aaatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    ||||||||||||||||||||| |||| |||||||||| ||||    
T  52058130 aaatgagggaccaaaagtggaagaatctgaaattacagggac 52058089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Original strand, 17606572 - 17606608
Alignment:
Q  122 agggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||| |||| |||||||||||||||    
T  17606572 agggaccaaaagtggaagaatctgaaattacaaggac 17606608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 29696818 - 29696858
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  29696818 aatgagggaccaaaagtggaagaatctgaaattacatggac 29696858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 228 - 256
Target Start/End: Original strand, 42510177 - 42510205
Alignment:
Q  228 gaccaaaagtggaggaatctgaaattaca 256  Q
    |||||||||||||||||||||||||||||    
T  42510177 gaccaaaagtggaggaatctgaaattaca 42510205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 28 - 249
Target Start/End: Complemental strand, 8634 - 8413
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||| || |||| ||||| | |||||| |||||||||||||||||||||||| || |||||||||||||||||||| || |||||||||| ||    
T  8634 gatttagattttgtccctgtaattttagattcttccacttttggtccctcattccaccacgtcagcagaatctgcatacatgacacgtaaaatgagg-ac 8536  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||     
T  8535 caaaaatggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaattgatgcagattttgttgacgtgatgaaaggag 8436  T
Q  227 tgaccaaaagtggaggaatctga 249  Q
     ||||||||||| | ||||||||    
T  8435 agaccaaaagtgaaagaatctga 8413  T

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Target: scaffold0809 (Bit Score: 118; Significance: 3e-60; HSPs: 3)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 48 - 256
Target Start/End: Complemental strand, 1702 - 1493
Alignment:
Q  48 aatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaa 147  Q
    ||||||| |||||| ||||||||||||||||   |||||  | |||||||||||||||||||  || |||||||||||||||||||||||| ||| ||||    
T  1702 aatttcagattcttccacttttggtccctcacatcaccacatcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggagtaatctgaa 1603  T
Q  148 attacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggaggaatc 246  Q
    ||||||||||||||||||||||||||| |||||||| ||| |||||||||||| ||||| || ||||||||||||||||  ||||||||||||| |||||    
T  1602 attacaaggaccaaaagtgggaggaatctgaaattatagggacgtaatttatgtagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatc 1503  T
Q  247 tgaaattaca 256  Q
    ||||||||||    
T  1502 tgaaattaca 1493  T

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Target: scaffold0809; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 158
Target Start/End: Original strand, 1672 - 1710
Alignment:
Q  120 tgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  1672 tgagggaccaaaagtggaagaatctgaaattacaaggac 1710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 1476 - 1553
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    ||||||||||  || |||| ||||||| |||||| ||||||||||||||| || || || || |||||||||| ||||    
T  1476 gatttagattatgtccctgtaatttcagattcttccacttttggtccctcctttcatcacgtcagcagaatctacata 1553  T

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Target: scaffold0185 (Bit Score: 114; Significance: 7e-58; HSPs: 2)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 3935 - 4164
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggac 127  Q
    ||||||||||  || |||| ||||||| |||||| |||| |||||| |||||| |||||||| ||||||||||||| |||||  |  |||||||||||||    
T  3935 gatttagattatgtccctgtaatttcaaattcttccactgttggtcgctcatttcaccatgtcagcagaatctgcacacatggcaagtaaaatgagggac 4034  T
Q  128 caaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||  || ||||||||||||||| || ||||||||||||||||     
T  4035 caaaagtggaggaatatgaaattacagtgaccaaaagtgggaggaatctgaaattacagagacataatttatgcagattctgctgacgtgatgaaaggag 4134  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     |||||||| || | |||||||||||||||    
T  4135 ggaccaaaaatgaaagaatctgaaattaca 4164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 4161 - 4104
Alignment:
Q  48 aatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    ||||||| ||||||||| |||||||||||| || || || || |||||||||||||||    
T  4161 aatttcagattctttcatttttggtccctcctttcatcacgtcagcagaatctgcata 4104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 48 - 255
Target Start/End: Original strand, 306 - 513
Alignment:
Q  48 aatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaa 147  Q
    ||||||| |||||| ||||||||||||||||||||||||  |||||||||| ||||||||||  || |||||||||||||||||||| ||||||| ||||    
T  306 aatttcagattcttccacttttggtccctcattccaccacataagcagaatttgcatacatggtacgtaaaatgagggaccaaaagtagaggaatctgaa 405  T
Q  148 attacaaggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaagga-tgaccaaaagtggaggaatc 246  Q
    |||||| |||||||||  ||||||||| |||||||||| | |||||||||||||||||| || ||| ||||| ||||||   ||||||||||||  ||||    
T  406 attacagggaccaaaatcgggaggaatctgaaattacaag-acgtaatttatgcagattctgctgatgtgattaaaggagataccaaaagtggaataatc 504  T
Q  247 tgaaattac 255  Q
    |||||||||    
T  505 tgaaattac 513  T

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Target: scaffold0477 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 29 - 163
Target Start/End: Complemental strand, 5059 - 4924
Alignment:
Q  29 atttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatacatgaaacataaaatgagggacc 128  Q
    ||||||||||||| |||| ||||| | |||||| |||||||||||||||||||||||| ||||||||||||| ||||||||  || ||||||||||||||    
T  5059 atttagatttagtccctgtaattttagattcttccacttttggtccctcattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggacc 4960  T
Q  129 aaaagt-ggaggaatatgaaattacaaggaccaaaa 163  Q
    |||||| |||| |||||||||||||| |||| ||||    
T  4959 aaaagtgggagaaatatgaaattacatggactaaaa 4924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 256
Target Start/End: Original strand, 7392 - 7494
Alignment:
Q  155 ggaccaaaagtgggaggaatatgaaattacaggaacgtaatttatgcagattttgttgacgtgatgaaaggat-gaccaaaagtggaggaatctgaaatt 253  Q
    ||||||||||||| |||||| |||||||||| | | |||||||||||||||||||||||| |||||||||||| |||||||||| || ||||||||||||    
T  7392 ggaccaaaagtggtaggaatctgaaattacaaggatgtaatttatgcagattttgttgacttgatgaaaggatagaccaaaagtagaagaatctgaaatt 7491  T
Q  254 aca 256  Q
    |||    
T  7492 aca 7494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 28 - 157
Target Start/End: Original strand, 7292 - 7426
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaat----ctgcatacatgaaacataaaatgag 123  Q
    ||||||||||| || |||| |||||||||||||| |||||| ||||||||||||||||| | ||||| |||    |||||||||||  || |||||||||    
T  7292 gatttagattttgtccctgtaatttcatattcttccactttcggtccctcattccaccacggaagcaaaatctgactgcatacatggtacgtaaaatgag 7391  T
Q  124 ggaccaaaagtgg-aggaatatgaaattacaagga 157  Q
    ||||||||||||| |||||| ||||||||||||||    
T  7392 ggaccaaaagtggtaggaatctgaaattacaagga 7426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 7344 - 7304
Alignment:
Q  118 aatgagggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    ||||||||||| |||||||| ||||||||||||||| ||||    
T  7344 aatgagggaccgaaagtggaagaatatgaaattacagggac 7304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 15800 - 15927
Alignment:
Q  129 aaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacag-gaacgtaatttatgcagattttgttgacgtgatgaaagga- 226  Q
    |||||| ||||||| ||||||||||  ||||||||||||||||||| ||||||||||| | |  ||||||||||||||| || ||||||||||||||||     
T  15800 aaaagttgaggaatttgaaattacagagaccaaaagtgggaggaatctgaaattacagcgta--taatttatgcagattctgctgacgtgatgaaaggag 15897  T
Q  227 tgaccaaaagtggaggaatctgaaattaca 256  Q
     ||||||||||| | |||| ||||||||||    
T  15898 agaccaaaagtgaaagaatatgaaattaca 15927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 105
Target Start/End: Complemental strand, 15939 - 15867
Alignment:
Q  33 agatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcata 105  Q
    |||||| || |||| |||||||||||||||||||||||||| ||| || || || || |||||||||||||||    
T  15939 agattttgtccctgtaatttcatattctttcacttttggtctctcctttcatcacgtcagcagaatctgcata 15867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 197 - 256
Target Start/End: Original strand, 12217 - 12277
Alignment:
Q  197 tatgcagattttgttgacgtgatgaaaggatg-accaaaagtggaggaatctgaaattaca 256  Q
    |||||||||| || |||||||||||||||||| |||||||||||| |||||||||||||||    
T  12217 tatgcagattctgctgacgtgatgaaaggatggaccaaaagtggaagaatctgaaattaca 12277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 12294 - 12216
Alignment:
Q  28 gatttagatttagtacctgcaatttcatattctttcacttttggtccctcattccaccatgtaagcagaatctgcatac 106  Q
    ||||||||||| || |||| ||||||| |||||| |||||||||||| || || || || || ||||||||||||||||    
T  12294 gatttagattttgtccctgtaatttcagattcttccacttttggtccatcctttcatcacgtcagcagaatctgcatac 12216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Complemental strand, 4781 - 4745
Alignment:
Q  122 agggaccaaaagtggaggaatatgaaattacaaggac 158  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  4781 agggaccaaaagtggaggaatctgaaattacagggac 4745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 228 - 256
Target Start/End: Complemental strand, 4778 - 4750
Alignment:
Q  228 gaccaaaagtggaggaatctgaaattaca 256  Q
    |||||||||||||||||||||||||||||    
T  4778 gaccaaaagtggaggaatctgaaattaca 4750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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