View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17552_low_2 (Length: 494)

Name: NF17552_low_2
Description: NF17552
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17552_low_2
NF17552_low_2
[»] chr5 (28 HSPs)
chr5 (23-488)||(29716619-29717083)
chr5 (186-328)||(37014275-37014417)
chr5 (186-329)||(5651173-5651316)
chr5 (186-329)||(7125151-7125294)
chr5 (186-332)||(4240101-4240247)
chr5 (186-328)||(39852791-39852933)
chr5 (186-296)||(4549929-4550039)
chr5 (186-328)||(13926352-13926494)
chr5 (186-328)||(40013344-40013486)
chr5 (186-323)||(1460790-1460927)
chr5 (186-291)||(34218441-34218546)
chr5 (186-293)||(16548867-16548974)
chr5 (186-296)||(29758678-29758787)
chr5 (218-332)||(33892825-33892939)
chr5 (186-291)||(21489872-21489977)
chr5 (207-326)||(37798109-37798228)
chr5 (186-328)||(5949533-5949674)
chr5 (186-328)||(13999733-13999875)
chr5 (186-291)||(15672705-15672810)
chr5 (218-351)||(21238723-21238856)
chr5 (215-296)||(2675093-2675174)
chr5 (186-326)||(28623156-28623296)
chr5 (215-291)||(25868800-25868876)
chr5 (215-323)||(34909593-34909701)
chr5 (215-296)||(16497755-16497836)
chr5 (215-263)||(15286586-15286634)
chr5 (424-488)||(34218750-34218814)
chr5 (218-342)||(31913502-31913626)
[»] chr3 (42 HSPs)
chr3 (186-357)||(33693228-33693399)
chr3 (186-351)||(4962695-4962860)
chr3 (186-323)||(21386476-21386613)
chr3 (186-331)||(48379569-48379714)
chr3 (215-357)||(49458359-49458501)
chr3 (218-357)||(16155168-16155307)
chr3 (186-332)||(7437554-7437700)
chr3 (186-332)||(20833316-20833462)
chr3 (186-332)||(26107748-26107894)
chr3 (186-332)||(52810777-52810923)
chr3 (186-328)||(50761739-50761881)
chr3 (186-329)||(8598631-8598774)
chr3 (189-332)||(50902944-50903087)
chr3 (186-296)||(7665563-7665673)
chr3 (186-328)||(31645900-31646042)
chr3 (186-332)||(44905490-44905636)
chr3 (186-332)||(54629270-54629416)
chr3 (186-296)||(17946647-17946757)
chr3 (186-328)||(23753028-23753170)
chr3 (186-296)||(37455266-37455376)
chr3 (186-296)||(43172899-43173009)
chr3 (186-296)||(52617643-52617753)
chr3 (215-332)||(9818548-9818664)
chr3 (187-296)||(45602436-45602545)
chr3 (188-328)||(40897552-40897692)
chr3 (186-326)||(49296088-49296228)
chr3 (186-321)||(51737333-51737468)
chr3 (186-296)||(39038509-39038619)
chr3 (186-323)||(18750062-18750199)
chr3 (215-296)||(25049872-25049953)
chr3 (207-326)||(53835955-53836074)
chr3 (186-328)||(36673791-36673933)
chr3 (215-324)||(22489475-22489584)
chr3 (185-276)||(21718452-21718543)
chr3 (186-251)||(45863242-45863307)
chr3 (215-323)||(42736308-42736416)
chr3 (424-486)||(16155467-16155529)
chr3 (242-328)||(34483737-34483823)
chr3 (215-324)||(37832573-37832682)
chr3 (424-488)||(4962428-4962492)
chr3 (215-296)||(49293804-49293885)
chr3 (236-268)||(2118484-2118516)
[»] chr1 (54 HSPs)
chr1 (186-357)||(47371532-47371703)
chr1 (186-357)||(3583513-3583684)
chr1 (186-331)||(5494731-5494876)
chr1 (186-332)||(46328406-46328552)
chr1 (186-328)||(45272987-45273129)
chr1 (186-342)||(48966463-48966619)
chr1 (186-331)||(49453043-49453189)
chr1 (186-329)||(9192017-9192160)
chr1 (186-328)||(8140869-8141011)
chr1 (186-328)||(15834670-15834812)
chr1 (186-342)||(5209340-5209496)
chr1 (186-342)||(28403918-28404074)
chr1 (186-329)||(4005060-4005203)
chr1 (186-332)||(38535778-38535924)
chr1 (186-332)||(38557996-38558142)
chr1 (186-351)||(25253486-25253651)
chr1 (215-342)||(32760071-32760198)
chr1 (186-329)||(51106885-51107028)
chr1 (186-328)||(6312996-6313138)
chr1 (186-328)||(25612512-25612654)
chr1 (186-328)||(29396070-29396212)
chr1 (186-326)||(41353414-41353554)
chr1 (186-328)||(51702015-51702157)
chr1 (186-296)||(52182319-52182429)
chr1 (186-279)||(49971631-49971724)
chr1 (186-322)||(1243298-1243434)
chr1 (186-326)||(8147310-8147450)
chr1 (186-326)||(26757608-26757748)
chr1 (215-322)||(7798522-7798629)
chr1 (235-342)||(42304472-42304579)
chr1 (186-328)||(48177078-48177221)
chr1 (186-328)||(25830885-25831027)
chr1 (186-296)||(27257876-27257986)
chr1 (186-323)||(35177201-35177339)
chr1 (215-296)||(3593268-3593349)
chr1 (186-291)||(9322181-9322286)
chr1 (215-326)||(11579088-11579199)
chr1 (221-332)||(33886843-33886953)
chr1 (221-332)||(33957297-33957407)
chr1 (215-328)||(18798901-18799014)
chr1 (215-296)||(49231456-49231537)
chr1 (186-296)||(49236984-49237094)
chr1 (215-296)||(1108374-1108455)
chr1 (186-342)||(15927292-15927448)
chr1 (215-291)||(18954487-18954563)
chr1 (424-488)||(32759819-32759883)
chr1 (215-294)||(34019141-34019220)
chr1 (426-492)||(49236711-49236777)
chr1 (215-332)||(34751555-34751671)
chr1 (215-283)||(2293407-2293475)
chr1 (428-488)||(35176986-35177046)
chr1 (215-278)||(8122211-8122274)
chr1 (216-250)||(21248539-21248573)
chr1 (422-471)||(48966225-48966274)
[»] chr6 (29 HSPs)
chr6 (186-351)||(16438678-16438843)
chr6 (186-357)||(2606867-2607038)
chr6 (186-323)||(31975643-31975780)
chr6 (186-329)||(1463656-1463799)
chr6 (186-329)||(3000212-3000355)
chr6 (186-329)||(6788072-6788215)
chr6 (186-328)||(30384703-30384845)
chr6 (215-296)||(13461374-13461455)
chr6 (186-296)||(7497518-7497628)
chr6 (186-296)||(14262107-14262217)
chr6 (186-328)||(31896057-31896199)
chr6 (186-323)||(31067852-31067989)
chr6 (215-296)||(31535078-31535159)
chr6 (215-332)||(31996231-31996347)
chr6 (215-289)||(28900863-28900937)
chr6 (216-296)||(21199556-21199636)
chr6 (186-296)||(10113798-10113908)
chr6 (186-323)||(4200095-4200232)
chr6 (215-296)||(8779599-8779680)
chr6 (186-288)||(34758758-34758860)
chr6 (424-471)||(31534818-31534865)
chr6 (226-291)||(33641311-33641376)
chr6 (215-291)||(7835387-7835463)
chr6 (424-491)||(31975355-31975422)
chr6 (254-328)||(34773873-34773947)
chr6 (215-296)||(21010895-21010976)
chr6 (270-342)||(24194469-24194542)
chr6 (432-488)||(2607234-2607290)
chr6 (424-456)||(28900581-28900613)
[»] chr8 (40 HSPs)
chr8 (186-342)||(8029813-8029969)
chr8 (186-338)||(31625729-31625881)
chr8 (186-329)||(26856526-26856669)
chr8 (186-332)||(32497962-32498108)
chr8 (186-323)||(10294982-10295119)
chr8 (186-294)||(12522528-12522636)
chr8 (186-328)||(18305614-18305756)
chr8 (186-328)||(39467156-39467298)
chr8 (186-328)||(42305242-42305384)
chr8 (220-357)||(27878592-27878729)
chr8 (220-357)||(28018773-28018910)
chr8 (186-296)||(9288164-9288274)
chr8 (186-328)||(19717512-19717654)
chr8 (186-326)||(19484187-19484327)
chr8 (186-296)||(7760780-7760890)
chr8 (186-328)||(14781770-14781912)
chr8 (186-296)||(17234686-17234796)
chr8 (186-328)||(18958365-18958507)
chr8 (215-296)||(37131305-37131386)
chr8 (186-329)||(16364127-16364270)
chr8 (218-357)||(27915536-27915675)
chr8 (218-357)||(27961955-27962094)
chr8 (216-323)||(41393958-41394065)
chr8 (186-328)||(43166314-43166456)
chr8 (186-328)||(43308146-43308288)
chr8 (186-328)||(44725429-44725571)
chr8 (215-296)||(24067107-24067188)
chr8 (186-351)||(6388085-6388254)
chr8 (422-488)||(12737801-12737867)
chr8 (259-328)||(12522420-12522489)
chr8 (215-296)||(41252165-41252246)
chr8 (215-331)||(26620329-26620445)
chr8 (281-349)||(42423257-42423325)
chr8 (218-296)||(1527923-1528001)
chr8 (186-291)||(24082184-24082289)
chr8 (216-252)||(12522484-12522520)
chr8 (424-475)||(12522136-12522187)
chr8 (218-333)||(33177830-33177944)
chr8 (210-328)||(7466766-7466884)
chr8 (218-296)||(28317090-28317168)
[»] chr4 (53 HSPs)
chr4 (186-322)||(29510061-29510197)
chr4 (186-338)||(49501161-49501313)
chr4 (186-338)||(49507226-49507378)
chr4 (186-332)||(29855937-29856083)
chr4 (186-296)||(32889868-32889978)
chr4 (186-332)||(49834468-49834614)
chr4 (186-323)||(41725534-41725671)
chr4 (215-332)||(50517194-50517311)
chr4 (215-351)||(26491089-26491225)
chr4 (215-351)||(46286710-46286846)
chr4 (186-296)||(871782-871891)
chr4 (186-332)||(5800385-5800531)
chr4 (189-334)||(32322490-32322636)
chr4 (215-351)||(24966485-24966621)
chr4 (215-291)||(33138801-33138877)
chr4 (186-332)||(28484316-28484463)
chr4 (207-326)||(29469156-29469275)
chr4 (186-328)||(23987618-23987759)
chr4 (186-328)||(30966981-30967123)
chr4 (186-324)||(54853118-54853256)
chr4 (186-296)||(55165497-55165607)
chr4 (215-323)||(6487312-6487420)
chr4 (207-326)||(8084202-8084321)
chr4 (186-329)||(23671362-23671505)
chr4 (186-328)||(5441823-5441965)
chr4 (186-328)||(27768485-27768627)
chr4 (186-328)||(48261499-48261641)
chr4 (186-328)||(50018613-50018755)
chr4 (186-328)||(37828068-37828210)
chr4 (186-328)||(51321277-51321419)
chr4 (215-326)||(42937402-42937513)
chr4 (215-332)||(8563343-8563460)
chr4 (215-296)||(21486516-21486597)
chr4 (186-328)||(32683666-32683807)
chr4 (186-296)||(54341563-54341673)
chr4 (215-296)||(51967278-51967359)
chr4 (215-322)||(9972774-9972881)
chr4 (215-296)||(56423996-56424077)
chr4 (426-488)||(33139115-33139177)
chr4 (215-273)||(40487703-40487761)
chr4 (259-332)||(37916283-37916356)
chr4 (215-332)||(54561220-54561336)
chr4 (215-279)||(14334395-14334459)
chr4 (219-291)||(41470352-41470424)
chr4 (215-291)||(46862941-46863017)
chr4 (422-465)||(46862672-46862715)
chr4 (215-333)||(26448632-26448749)
chr4 (424-462)||(35518238-35518276)
chr4 (215-264)||(3860237-3860286)
chr4 (215-264)||(3868994-3869043)
chr4 (215-296)||(40162790-40162871)
chr4 (218-278)||(2326700-2326760)
chr4 (424-488)||(46287029-46287093)
[»] scaffold0042 (1 HSPs)
scaffold0042 (186-332)||(57699-57845)
[»] chr2 (45 HSPs)
chr2 (186-351)||(31847182-31847348)
chr2 (186-351)||(2308678-2308843)
chr2 (186-328)||(28739933-28740075)
chr2 (186-342)||(40829606-40829764)
chr2 (186-332)||(6224212-6224358)
chr2 (186-332)||(25288584-25288730)
chr2 (186-323)||(34342210-34342347)
chr2 (186-286)||(214938-215038)
chr2 (186-296)||(10657851-10657961)
chr2 (194-332)||(13833054-13833192)
chr2 (186-296)||(15224202-15224312)
chr2 (186-328)||(28845006-28845148)
chr2 (230-351)||(18727611-18727732)
chr2 (227-332)||(38295701-38295806)
chr2 (186-326)||(18899917-18900057)
chr2 (186-296)||(3858441-3858551)
chr2 (186-328)||(7027324-7027466)
chr2 (186-328)||(26789206-26789348)
chr2 (186-332)||(33136039-33136183)
chr2 (186-328)||(3575262-3575404)
chr2 (186-328)||(18177692-18177834)
chr2 (215-332)||(13898477-13898593)
chr2 (215-332)||(14039094-14039210)
chr2 (215-296)||(15926379-15926460)
chr2 (215-323)||(33262854-33262962)
chr2 (218-332)||(24025852-24025966)
chr2 (186-322)||(379351-379487)
chr2 (215-323)||(3991774-3991882)
chr2 (215-323)||(35404311-35404419)
chr2 (215-323)||(38413446-38413554)
chr2 (242-332)||(43078967-43079057)
chr2 (215-288)||(1833733-1833806)
chr2 (218-343)||(11153322-11153447)
chr2 (215-332)||(19948539-19948655)
chr2 (215-296)||(32242225-32242306)
chr2 (215-296)||(32293914-32293994)
chr2 (215-291)||(12877687-12877763)
chr2 (186-293)||(43304994-43305101)
chr2 (242-328)||(43825317-43825403)
chr2 (424-481)||(40829952-40830009)
chr2 (218-322)||(41978841-41978945)
chr2 (217-280)||(30850271-30850334)
chr2 (219-296)||(37810902-37810979)
chr2 (424-488)||(34342562-34342626)
chr2 (242-322)||(45161126-45161206)
[»] scaffold1128 (1 HSPs)
scaffold1128 (186-331)||(888-1033)
[»] chr7 (52 HSPs)
chr7 (191-357)||(21486119-21486285)
chr7 (186-332)||(37328326-37328472)
chr7 (186-332)||(8675750-8675897)
chr7 (186-351)||(42610589-42610754)
chr7 (186-296)||(12740789-12740899)
chr7 (186-279)||(43172126-43172219)
chr7 (186-321)||(44256406-44256541)
chr7 (186-296)||(27148817-27148927)
chr7 (186-332)||(37972517-37972663)
chr7 (186-332)||(44121573-44121719)
chr7 (191-338)||(29585938-29586085)
chr7 (186-332)||(29893391-29893537)
chr7 (186-332)||(41827747-41827893)
chr7 (210-332)||(48136868-48136990)
chr7 (186-291)||(32884190-32884295)
chr7 (186-293)||(33891913-33892020)
chr7 (186-328)||(510065-510207)
chr7 (186-332)||(7993576-7993722)
chr7 (186-296)||(18838829-18838939)
chr7 (186-328)||(23101710-23101852)
chr7 (186-328)||(28034492-28034634)
chr7 (186-328)||(28342730-28342872)
chr7 (186-326)||(14741398-14741538)
chr7 (215-331)||(21024067-21024183)
chr7 (186-328)||(29614439-29614581)
chr7 (186-328)||(39784526-39784668)
chr7 (186-296)||(40460390-40460500)
chr7 (215-296)||(11735208-11735289)
chr7 (186-328)||(3023353-3023495)
chr7 (186-296)||(26201808-26201918)
chr7 (186-276)||(33383093-33383183)
chr7 (186-328)||(39028506-39028648)
chr7 (237-338)||(30823108-30823209)
chr7 (215-296)||(33497111-33497192)
chr7 (186-322)||(4639866-4640002)
chr7 (216-332)||(14732278-14732393)
chr7 (219-323)||(23016997-23017101)
chr7 (256-332)||(21067869-21067945)
chr7 (207-296)||(16709428-16709515)
chr7 (207-296)||(17683664-17683751)
chr7 (215-323)||(35313558-35313666)
chr7 (215-321)||(31174710-31174816)
chr7 (424-480)||(43172384-43172440)
chr7 (215-290)||(37392648-37392723)
chr7 (215-321)||(1254461-1254567)
chr7 (226-296)||(6268513-6268583)
chr7 (424-462)||(16709856-16709894)
chr7 (424-462)||(17684092-17684130)
chr7 (242-328)||(47067185-47067271)
chr7 (218-323)||(38910485-38910590)
chr7 (215-323)||(19594212-19594319)
chr7 (215-279)||(37915931-37915995)
[»] scaffold0110 (1 HSPs)
scaffold0110 (186-332)||(39270-39416)
[»] scaffold0013 (2 HSPs)
scaffold0013 (186-357)||(89252-89414)
scaffold0013 (424-456)||(89602-89634)
[»] scaffold0543 (1 HSPs)
scaffold0543 (186-328)||(10945-11087)
[»] scaffold1504 (1 HSPs)
scaffold1504 (186-296)||(1287-1397)
[»] scaffold0573 (2 HSPs)
scaffold0573 (215-289)||(8857-8931)
scaffold0573 (424-456)||(9181-9213)
[»] scaffold0383 (1 HSPs)
scaffold0383 (242-334)||(16662-16754)
[»] scaffold0152 (2 HSPs)
scaffold0152 (242-334)||(20898-20990)
scaffold0152 (242-334)||(28811-28903)
[»] scaffold0246 (2 HSPs)
scaffold0246 (186-332)||(1339-1485)
scaffold0246 (215-273)||(25642-25700)
[»] scaffold0421 (1 HSPs)
scaffold0421 (242-321)||(1727-1806)
[»] scaffold0457 (1 HSPs)
scaffold0457 (215-260)||(6193-6238)
[»] scaffold0433 (1 HSPs)
scaffold0433 (215-264)||(391-440)
[»] scaffold0347 (1 HSPs)
scaffold0347 (236-296)||(15132-15192)


Alignment Details
Target: chr5 (Bit Score: 394; Significance: 0; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 394; E-Value: 0
Query Start/End: Original strand, 23 - 488
Target Start/End: Complemental strand, 29717083 - 29716619
Alignment:
Q  23 tattcttgttttgagggagacacggtaaattcttaagcattaagaatttccatttattcacaccacgtgtattgagttaattatataaacaaactatgat 122  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29717083 tattcttgttttgagggagacacagtaaattcttaagcattaagaatttccatttattcacaccacgtgtattgagttaattatataaacaaactatgat 29716984  T
Q  123 aagcattcactcacgctctatgttaggggcggtgccacgttcatgtgagggtgtgtgtctgcaaaatcgagtgttaactctccaagtttacggagtttac 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29716983 aagcattcactcacgctctatgttaggggcggtgccacgttcatgtgagggtgtgtgtccgcaaaatcgagtgttaactctccaagtttacggagtttac 29716884  T
Q  223 gtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggtaaactc 322  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29716883 gtttttaggtatcaaaatcgtgttaactcgaaggtaaacttgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggtaaactc 29716784  T
Q  323 gtgtaaactcaatcgagttttacgagtttccatctnnnnnnnntggccctttttttgggcccannnnnnnncaaaacccaattccttttctagaaacccc 422  Q
    |||||||||||||||||||||||||||||||||||        ||||||||||||||||||||        ||||||||||||| |||||||| ||||||    
T  29716783 gtgtaaactcaatcgagttttacgagtttccatctaaaaaaaatggccctttttttgggcccattttttttcaaaacccaattcattttctag-aacccc 29716685  T
Q  423 tagttagggttgcgatttcgacggtggaaattcagttttcgacaccgatgattacgacgtcggtta 488  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29716684 tagttagggttgcgatttcgacggtggaaattcagttttcgacaccgatgattacgacgtcggtta 29716619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 37014275 - 37014417
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| |||||||| ||||||||||  ||||||||||||||||  ||||||| ||| |||||||||||||   ||||    
T  37014275 aaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattgaaagg 37014374  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| || || || |||||| |||||||||||||||    
T  37014375 tttaacgagtttgaccgagttaacactcggtaaactcgtgtaa 37014417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 186 - 329
Target Start/End: Complemental strand, 5651316 - 5651173
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||||||||||| || | ||||||  || ||||||| |||||||| |||||||||||||||||| |||||||||||||||||||| ||||   || |    
T  5651316 aaatcgagtgttaacacttcgagtttatcgattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaattgaaaag 5651217  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaa 329  Q
    ||||||||||| || || || ||||||  |||||||||||||||    
T  5651216 tttgacgagtttgaccgagttaacactcagtaaactcgtgtaaa 5651173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 186 - 329
Target Start/End: Complemental strand, 7125294 - 7125151
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||| |||| |||||  | ||||||| |||||||||| |||||||   |||| |||||||||||| |||||||||||||||||||||||||| ||| |    
T  7125294 aaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcggaaag 7125195  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaa 329  Q
    ||||||||||| || || || ||||||  |||||||||||||||    
T  7125194 tttgacgagtttgaccgagttaacactcagtaaactcgtgtaaa 7125151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 186 - 332
Target Start/End: Complemental strand, 4240247 - 4240101
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||| ||||||||||||||  || |||| ||||||||||||||||||   ||||||||||||||||  ||||||||||  |||||||||||||| |||||    
T  4240247 aaattgagtgttaactctctgagattaccgagtttacgtttttaggtgcaaaaatcgtgttaactctgaggtaaactccgtttctggtaaaatcggaagg 4240148  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
    ||| ||||||| ||    || |||||| |||||||||||||||||||    
T  4240147 tttaacgagtttgacaaagttaacactcggtaaactcgtgtaaactc 4240101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 39852791 - 39852933
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||  |||||||| ||||||||||  ||||||||||||||||  ||||||| ||||||| |||||||||  |||||    
T  39852791 aaatcgagtgttaactctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcgatttttggtaaaattggaagg 39852890  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||||| |||||||||||||||    
T  39852891 tttaacgagtttgacggagttaacactcggtaaactcgtgtaa 39852933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 186 - 296
Target Start/End: Complemental strand, 4550039 - 4549929
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| |||||||||| ||||||||  ||||||||||||||||  ||||||| ||| |||||||||||||  |||||    
T  4550039 aaatcgagtgttaactctccgagattaccgagtttacgtgtttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaagg 4549940  T
Q  286 tttgacgagtt 296  Q
    ||| |||||||    
T  4549939 tttaacgagtt 4549929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 13926352 - 13926494
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||  |||||||||||||||||||  ||||||||||||||||  ||||||| ||| |||||||||||||  |||||    
T  13926352 aaatcgagtgttaactctccgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaagg 13926451  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| | ||||| ||    || |||||| |||||||||||||||    
T  13926452 tttaaggagtttgactaagttaacactcggtaaactcgtgtaa 13926494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 40013486 - 40013344
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| |||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||||||||||||  |||||    
T  40013486 aaatcgagtgttaactctccgagattaccgagtttacatttttaagtataaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaagg 40013387  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| || || | ||  | || |||||| |||||||||||||||    
T  40013386 tttaacaagattgactgagttaacactcggtaaactcgtgtaa 40013344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 186 - 323
Target Start/End: Complemental strand, 1460927 - 1460790
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||||||||||||||   || |||| |||||||||||||||||||  ||||| ||||||||||  ||||||||||| |||||||||||||| |||||    
T  1460927 aaatcgagtgttaactctttgagattaccgagtttacgtttttaggtacaaaaattgtgttaactcagaggtaaactcggtttctggtaaaatcggaagg 1460828  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcg 323  Q
     || ||||||| ||  | || |||||| ||||||||||    
T  1460827 cttaacgagtttgactgagttaacactcggtaaactcg 1460790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 186 - 291
Target Start/End: Original strand, 34218441 - 34218546
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||| |||||||||| |||  |||||||  ||||||||||||||| || |||||||||||||| ||||||||||| ||| |||||| |||||||||||||    
T  34218441 aaattgagtgttaacactctgagtttaccaagtttacgtttttagataccaaaatcgtgttaattcgaaggtaaattcggtttctgctaaaatcagaagg 34218540  T
Q  286 tttgac 291  Q
    ||||||    
T  34218541 tttgac 34218546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 186 - 293
Target Start/End: Complemental strand, 16548974 - 16548867
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||    ||||||  ||||||||||||||||||| ||||||||||| |||||| |||||||||| |||||||||||||||  || |    
T  16548974 aaatcgagtgttaactcattgagtttatcgagtttacgtttttaggtaccaaaatcgtgtcaactcggaggtaaactcaatttctggtaaaatcgaaatg 16548875  T
Q  286 tttgacga 293  Q
    ||||||||    
T  16548874 tttgacga 16548867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 29758678 - 29758787
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||| ||||||||||||   |||||||  |||||||||||||||||||||||||||||||||||||| ||||| | | |||||||||| ||||| ||| |    
T  29758678 aaattgagtgttaactcgttaagtttatcgagtttacgtttttaggtatcaaaatcgtgttaactcggaggtagatttgatttctggt-aaatcggaatg 29758776  T
Q  286 tttgacgagtt 296  Q
    |||||||||||    
T  29758777 tttgacgagtt 29758787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 218 - 332
Target Start/End: Complemental strand, 33892939 - 33892825
Alignment:
Q  218 tttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggta 317  Q
    |||||||||||||||  ||||| |||||||||||| ||||||||||||||| || | ||||| ||| |||||||||||| || || || ||||| || ||    
T  33892939 tttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgatttttgatgaaatcggaaagtttgacgagtttgaccgagttaacacgtgtta 33892840  T
Q  318 aactcgtgtaaactc 332  Q
    |||||||||||||||    
T  33892839 aactcgtgtaaactc 33892825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 186 - 291
Target Start/End: Original strand, 21489872 - 21489977
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||| | ||||||||  || ||||| |||||||||| ||||||||||| || |||||| |||||| |||||||||||||||| ||| |    
T  21489872 aaatcgagtgttaacttttcaagtttattgattttacatttttaggtaccaaaatcgtgtcaattcgaagataaacttgatttctggtaaaatctgaatg 21489971  T
Q  286 tttgac 291  Q
    ||||||    
T  21489972 tttgac 21489977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 207 - 326
Target Start/End: Complemental strand, 37798228 - 37798109
Alignment:
Q  207 agtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtg 306  Q
    ||||||| |||||||||| ||||  | | |||| ||||||||||| ||||||||||| |||||||||||||||  || |||||||||||| || || ||     
T  37798228 agtttaccgagtttacgtgtttatctgttaaaaacgtgttaactcaaaggtaaactcaatttctggtaaaatcgaaaagtttgacgagtttgaccgagtt 37798129  T
Q  307 aacacttggtaaactcgtgt 326  Q
    |||||| |||||||||||||    
T  37798128 aacactcggtaaactcgtgt 37798109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 5949533 - 5949674
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||||| |||||||||| || |||   ||||||||||||||||||  ||||||||||||||||  ||||||| ||| |||||||||||||  |||||    
T  5949533 aaatcgagtattaactctccgagattatc-agtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaagg 5949631  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||||| ||||||| |||||||    
T  5949632 tttaacgagtttgactgagttaacactcggtaaacacgtgtaa 5949674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 13999875 - 13999733
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||| ||||| || ||| |||||| || ||||||||||  |||||||||||||||   || |||| ||| |||||||||||||  |||||    
T  13999875 aaatcgagtgttaaatctccgagattatggagttgacatttttaggtacaaaaatcgtgttaactttgagataaaatcggtttctggtaaaattggaagg 13999776  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||||| |||||||||||||||    
T  13999775 tttaacgagtttgactgagttaacactcggtaaactcgtgtaa 13999733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 186 - 291
Target Start/End: Complemental strand, 15672810 - 15672705
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||| ||||||||||| || ||||||| ||||||| |||||||||||  |||||||||| ||||| ||| |||||| ||||| |||||||||| ||| |    
T  15672810 aaatcaagtgttaactcgccgagtttactgagtttatgtttttaggtactaaaatcgtgtcaactcaaagataaacttgatttatggtaaaatcggaatg 15672711  T
Q  286 tttgac 291  Q
    ||||||    
T  15672710 tttgac 15672705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 351
Target Start/End: Complemental strand, 21238856 - 21238723
Alignment:
Q  218 tttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggta 317  Q
    ||||||||||||| |  ||||| |||||||||||| ||||||||||| ||| |||||||||| ||| |||||||||||| || || || ||||| || ||    
T  21238856 tttacgtttttagatggcaaaaacgtgttaactcggaggtaaactcggtttttggtaaaatcggaaagtttgacgagtttgaccgagttaacacatgtta 21238757  T
Q  318 aactc-gtgtaaactcaatcgagttttacgagttt 351  Q
    ||||| | ||||||||  ||||| |||||||||||    
T  21238756 aactcggagtaaactcgttcgag-tttacgagttt 21238723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 2675174 - 2675093
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagtt 296  Q
    ||||||||||||||||||  ||||| |||||||||||| ||||||||||||||| |||| |||||  || ||||||||||||    
T  2675174 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcgaaaagtttgacgagtt 2675093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 186 - 326
Target Start/End: Complemental strand, 28623296 - 28623156
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||| |||| |||||  | ||||||  |||||||||| |||||||   |||| |||||||||||| || ||||||||||||||||||||||   || |    
T  28623296 aaatcgcgtgtcaactcagcgagtttatcgagtttacgtgtttaggtgctaaaaacgtgttaactcggagataaactcgatttctggtaaaattgcaaag 28623197  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgt 326  Q
    ||||||||||| || || || ||||||  ||||||||||||    
T  28623196 tttgacgagtttgaccgagttaacactcagtaaactcgtgt 28623156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 291
Target Start/End: Original strand, 25868800 - 25868876
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgac 291  Q
    ||||||| ||||||||||  ||||| |||||||||||| ||||||||||| ||| |||| ||||| ||| |||||||    
T  25868800 gagtttatgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgac 25868876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 323
Target Start/End: Original strand, 34909593 - 34909701
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    ||||||||||||||||||  ||||| |||||||| ||| ||||||||||| | | |||| ||||| ||| |||||| ||||| || || |||||| | ||    
T  34909593 gagtttacgtttttaggtggcaaaaacgtgttaattcggaggtaaactcggtctttggtgaaatcggaaagtttgaggagtttgaccgagtgaacgcgtg 34909692  T
Q  315 gtaaactcg 323  Q
     ||||||||    
T  34909693 ttaaactcg 34909701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 16497836 - 16497755
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagtt 296  Q
    ||||||||||||||||||  |||||  ||||||| || ||| |||||||||||| || | ||||| ||| ||||||||||||    
T  16497836 gagtttacgtttttaggtgccaaaaatgtgttaattcaaagataaactcgatttttgctgaaatcggaatgtttgacgagtt 16497755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 15286634 - 15286586
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactc 263  Q
    |||||||||||||||||| |||||||||||| |||||| || |||||||    
T  15286634 gagtttacgtttttaggtgtcaaaatcgtgtaaactcggagataaactc 15286586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 488
Target Start/End: Original strand, 34218750 - 34218814
Alignment:
Q  424 agttagggttgcgatttcgacggtggaaattcagttttcgacaccgatgattacgacgtcggtta 488  Q
    |||||||||||| ||| ||||||||||||||||| ||||||| ||| |||||  |||||| ||||    
T  34218750 agttagggttgcaattccgacggtggaaattcagatttcgacgccggtgattgtgacgtcagtta 34218814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 31913502 - 31913626
Alignment:
Q  218 tttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggta 317  Q
    |||| |||||||| | ||||||  ||||||||| | ||||||||||||||| |||| |||||  || ||| | ||| || ||||| || ||||  || ||    
T  31913502 tttatgtttttagatgtcaaaaatgtgttaacttggaggtaaactcgatttttggtgaaatcgaaatgttcgtcgaatttgatcgagttaacatgtgtta 31913601  T
Q  318 aactcgtgtaaactcaatcgagttt 342  Q
    |||||| |||||||| | |||||||    
T  31913602 aactcgagtaaactcgaccgagttt 31913626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 7e-47; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 186 - 357
Target Start/End: Original strand, 33693228 - 33693399
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||| |||||||||||| ||||||| ||||||| | |||||  || |||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  33693228 aaatcgaatgttaactctccgagtttaccgagtttatgattttacataccaaaatcgtgttaacttggaggtaaactcgatttctggtaaaatcagaagg 33693327  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactcaatcgagttttacgagtttccatct 357  Q
    ||||||||||| || || || |||||| ||||||||||||||||||| | ||||||||||| |||| |||||    
T  33693328 tttgacgagtttgaccgagttaacactcggtaaactcgtgtaaactcgaccgagttttacgtgtttacatct 33693399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 186 - 351
Target Start/End: Complemental strand, 4962860 - 4962695
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||| ||| |||||||||| |||||||  |||||||||||||||||||||||||||||||||||| | ||||||||||||||||  ||||||||  ||||    
T  4962860 aaattgagcgttaactctctaagtttatcgagtttacgtttttaggtatcaaaatcgtgttaacttggaggtaaactcgatttcaagtaaaatcgaaagg 4962761  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactcaatcgagttttacgagttt 351  Q
    ||||||||||| || || || |||||| ||||||||| ||||||||| | |||||||  |||||||    
T  4962760 tttgacgagtttgaccgagttaacactcggtaaactcatgtaaactcgaccgagtttatcgagttt 4962695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 186 - 323
Target Start/End: Complemental strand, 21386613 - 21386476
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||   ||||||||||||||||||||||||||  || |    
T  21386613 aaatcgagtgttaactctccgagtttaccgagtttacatttttaggtatcaaaatcgtgttaacttagaggtaaactcgatttctggtaaaatcgaaaag 21386514  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcg 323  Q
    ||||||||||| || || ||  ||||| ||||||||||    
T  21386513 tttgacgagtttgaccgagttgacactcggtaaactcg 21386476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 186 - 331
Target Start/End: Original strand, 48379569 - 48379714
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| |||||||||||||||||||  ||||||||||||| ||  |||||||||||||||||||||||||| |||||    
T  48379569 aaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaattctgaggtaaactcgatttctggtaaaatcggaagg 48379668  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaact 331  Q
     || ||||||| ||  | || |||||| ||||||||||||||||||    
T  48379669 cttaacgagtttgactgagttaacactcggtaaactcgtgtaaact 48379714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 215 - 357
Target Start/End: Original strand, 49458359 - 49458501
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    |||||||||| ||||||||||||||| ||||||||||  | |||||||||||||||||||||||| |||||||||||||||| || |   | ||||||      
T  49458359 gagtttacgtgtttaggtatcaaaattgtgttaactctgaagtaaactcgatttctggtaaaatcggaaggtttgacgagtttgaccaaattaacactca 49458458  T
Q  315 gtaaactcgtgtaaactcaatcgagttttacgagtttccatct 357  Q
    |||||||||||||||||| | |||||||||||||||| |||||    
T  49458459 gtaaactcgtgtaaactcgaccgagttttacgagtttacatct 49458501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 218 - 357
Target Start/End: Original strand, 16155168 - 16155307
Alignment:
Q  218 tttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggta 317  Q
    |||||||||||||||| |||||||||||||||||  ||||||||||| ||| || ||||||  |||||||||||||||| || || || ||||||  |||    
T  16155168 tttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcggtttttgataaaattggaaggtttgacgagtttgaccgagttaacactcagta 16155267  T
Q  318 aactcgtgtaaactcaatcgagttttacgagtttccatct 357  Q
    ||||||||||||||| | |||||||||||||||| |||||    
T  16155268 aactcgtgtaaactcgaccgagttttacgagtttacatct 16155307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 186 - 332
Target Start/End: Complemental strand, 7437700 - 7437554
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| ||||||| |||||||| | |||||||| ||||||||||||||| || || |||||||| ||| |||||||||| |||||    
T  7437700 aaatcgagtgttaactctccgagtttactgagtttacttgtttaggtaccaaaatcgtgttaacacggagataaactcggtttttggtaaaatcggaagg 7437601  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
    | ||  ||||| || || || |||||| |||||||||||||||||||    
T  7437600 tatggtgagtttgaccgagttaacactcggtaaactcgtgtaaactc 7437554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 186 - 332
Target Start/End: Original strand, 20833316 - 20833462
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||  || |||  |||||||||||||||||||  ||||||||||||||||  ||||||||||  |||||||||||||| |||||    
T  20833316 aaatcgagtgttaactctctgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcagtttctggtaaaatcggaagg 20833415  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
    ||| ||||||| ||  | || |||||| |||||||||||||||||||    
T  20833416 tttaacgagtttgactgagttaacactcggtaaactcgtgtaaactc 20833462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 186 - 332
Target Start/End: Original strand, 26107748 - 26107894
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||| ||||||||| || |||  |||||||||||||||||||  |||||| |||||||||  ||||||||||||||||||||| |||| |||||    
T  26107748 aaatcgagtgataactctccgagattaacgagtttacgtttttaggtacaaaaatcatgttaactctgaggtaaactcgatttctggtacaatcggaagg 26107847  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
    ||| ||||||| ||  | || |||||| |||||||||||||||||||    
T  26107848 tttaacgagtttgactgagttaacactcggtaaactcgtgtaaactc 26107894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 186 - 332
Target Start/End: Original strand, 52810777 - 52810923
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| |||||||||||||||||||  ||||| ||||||||||  |||||||||||  ||||||||||||| |||||    
T  52810777 aaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaattgtgttaactctgaggtaaactcgggttctggtaaaatcggaagg 52810876  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
    ||| ||||||| ||  | || |||||| |||||||| ||||||||||    
T  52810877 tttaacgagtttgactgagttaacactcggtaaacttgtgtaaactc 52810923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 50761881 - 50761739
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| |||||||||||||||||||  ||||||||||||||||  ||||||| | |||||||||| ||||  |||||    
T  50761881 aaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatagatttctggtgaaattggaagg 50761782  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||||| |||||||||||||||    
T  50761781 tttaacgagtttgactgagttaacactaggtaaactcgtgtaa 50761739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 186 - 329
Target Start/End: Original strand, 8598631 - 8598774
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||| |||| |||||  | ||||||| |||||||||| |||||||   |||| |||||||||||| |||||||||||||||||||||||||| ||| |    
T  8598631 aaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcggaaag 8598730  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaa 329  Q
    ||||||||||| || || || ||||||  |||||||||||||||    
T  8598731 tttgacgagtttgaccgagttaacactcagtaaactcgtgtaaa 8598774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 189 - 332
Target Start/End: Complemental strand, 50903087 - 50902944
Alignment:
Q  189 tcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggttt 288  Q
    ||||||||||||||||| ||  ||  ||||||||||||||| |||  ||||||||||||||||  ||||||||||| |||||||||||||  ||||||||    
T  50903087 tcgagtgttaactctccgagaatatcgagtttacgtttttatgtacaaaaatcgtgttaactctgaggtaaactcggtttctggtaaaattggaaggttt 50902988  T
Q  289 gacgagttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
     ||||||| ||  | || |||||| |||||||||||||||||||    
T  50902987 aacgagtttgactgagttaacactcggtaaactcgtgtaaactc 50902944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 7665563 - 7665673
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||||||||||||| || | |||||  ||||||||||||||| || |||||||||||||||||| ||||||||||||||| |||||||||| |||      
T  7665563 aaatcgagtgttaactcgccgaatttacctagtttacgtttttagctaccaaaatcgtgttaactcggaggtaaactcgatttttggtaaaatcggaata 7665662  T
Q  286 tttgacgagtt 296  Q
    |||||||||||    
T  7665663 tttgacgagtt 7665673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 31646042 - 31645900
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| ||| |||||||||||||||  ||||||||||||||||  ||||||| ||| |||||||||||||  |||||    
T  31646042 aaatcgagtgttaactctccgagattaccgagcttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaagg 31645943  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| | ||||| ||  | || |||||| |||||||||||||||    
T  31645942 tttaaagagtttgactgagttaacactcggtaaactcgtgtaa 31645900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 186 - 332
Target Start/End: Complemental strand, 44905636 - 44905490
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| ||||||||||| |||||||  ||||||||||||| ||  |||||| |||| ||||||||||||||||||||    
T  44905636 aaatcgagtgttaactctccgagattaccgagtttacgttcttaggtacaaaaatcgtgttaattctgaggtaatctcggtttctggtaaaatcagaagg 44905537  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
     || |||| || ||  | || |||||| ||||||||||| |||||||    
T  44905536 cttaacgaatttgactgagttaacactcggtaaactcgtataaactc 44905490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 186 - 332
Target Start/End: Original strand, 54629270 - 54629416
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||| ||||||||||||||  || |||| |||||||||||||||||||  ||||||||||||||||  |||||||||||||||||| ||||| |  ||||    
T  54629270 aaattgagtgttaactctctgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcgatttctgataaaagcgaaagg 54629369  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
    ||| ||||||| |||   || ||||||  ||||||||||||||||||    
T  54629370 tttaacgagtttgattcagttaacactcagtaaactcgtgtaaactc 54629416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 17946647 - 17946757
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||| ||||| || |||  |||||||||||||||||||  |||||| |||||||||  ||||||||||| |||||||||||||| |||||    
T  17946647 aaatcgagtgttaattctccgagattatcgagtttacgtttttaggtacaaaaatcatgttaactctgaggtaaactcggtttctggtaaaatcggaagg 17946746  T
Q  286 tttgacgagtt 296  Q
    ||| |||||||    
T  17946747 tttaacgagtt 17946757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 23753170 - 23753028
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| |||||||| ||||||||||  ||||||||||||||||  ||||||| ||| ||| |||||||||  |||||    
T  23753170 aaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttttggtaaaattggaagg 23753071  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| || |||| ||  | || |||||| |||||||||||||||    
T  23753070 tttaaccagtttgactgagttaacactcggtaaactcgtgtaa 23753028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 37455266 - 37455376
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| ||| |||||||||||||||  ||||||||||||||||  ||||||| ||| |||||||||||||  |||||    
T  37455266 aaatcgagtgttaactctccgagattaccgagcttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaagg 37455365  T
Q  286 tttgacgagtt 296  Q
    ||| |||||||    
T  37455366 tttaacgagtt 37455376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 43172899 - 43173009
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||| ||||||||||  |||||||  ||||||| || |||||||| |||||||||||| ||||| ||||||||||||||||||||||||||  ||||    
T  43172899 aaatcgaatgttaactctttaagtttatcgagtttatgtgtttaggtaccaaaatcgtgttgactcggaggtaaactcgatttctggtaaaatcgaaagg 43172998  T
Q  286 tttgacgagtt 296  Q
    ||||| |||||    
T  43172999 tttgaagagtt 43173009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 186 - 296
Target Start/End: Complemental strand, 52617753 - 52617643
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||  || |||  || ||||||||||||||||  ||||||||||||||||  ||||||||||| |||||||||||||| |||||    
T  52617753 aaatcgagtgttaactctctgagattatcgaatttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggtaaaatcggaagg 52617654  T
Q  286 tttgacgagtt 296  Q
    ||| |||||||    
T  52617653 tttaacgagtt 52617643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 215 - 332
Target Start/End: Complemental strand, 9818664 - 9818548
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    ||||||||||||||||||  ||||| |||||||||||| ||||||||||||||| |||| ||||| ||| |||||||||||| || || |||||||| ||    
T  9818664 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtg 9818565  T
Q  315 gtaaactcgtgtaaactc 332  Q
     |||||||| ||||||||    
T  9818564 ttaaactcg-gtaaactc 9818548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 187 - 296
Target Start/End: Complemental strand, 45602545 - 45602436
Alignment:
Q  187 aatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggt 286  Q
    |||||||||||||||| || ||||||| || ||||||||||| ||||| ||||| |||| |||||| |||||||||| |||||||||||||||  || ||    
T  45602545 aatcgagtgttaactcgccgagtttaccgaatttacgtttttgggtattaaaattgtgtcaactcgtaggtaaactcaatttctggtaaaatcgaaatgt 45602446  T
Q  287 ttgacgagtt 296  Q
    ||||||||||    
T  45602445 ttgacgagtt 45602436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 188 - 328
Target Start/End: Original strand, 40897552 - 40897692
Alignment:
Q  188 atcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtt 287  Q
    |||||||||||||||||| || |||| || |||||| |||||||||  ||||||||||||||||  ||||||| ||| |||||| ||||||  |||||||    
T  40897552 atcgagtgttaactctccgagattaccgaatttacgattttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctgataaaattggaaggtt 40897651  T
Q  288 tgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    | ||||||| ||  | || |||||| |||||||||||||||    
T  40897652 taacgagtttgactgagttaacactcggtaaactcgtgtaa 40897692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 186 - 326
Target Start/End: Original strand, 49296088 - 49296228
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||| |||| |||||  | ||||||| |||||||||| |||||||   |||| |||||||||||| ||||||||||||||||||||||||||  || |    
T  49296088 aaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcgaaaag 49296187  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgt 326  Q
    ||||||||||| || || || ||||||  ||||||||||||    
T  49296188 tttgacgagtttgaccgagttaacactcagtaaactcgtgt 49296228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 186 - 321
Target Start/End: Complemental strand, 51737468 - 51737333
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||  || |||  |||||||| ||||||||||  ||||||||||||||||  ||||||||||| ||||| |||||||| |||||    
T  51737468 aaatcgagtgttaactctctgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctagtaaaatcggaagg 51737369  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaact 321  Q
    ||| ||||||| ||  | || |||||| ||||||||    
T  51737368 tttaacgagtttgactgagttaacactcggtaaact 51737333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 39038509 - 39038619
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||  || |||  || ||||||||||||||||  ||||| ||||||||||  ||||||||||| |||||||||||||| |||||    
T  39038509 aaatcgagtgttaactctctgagattatcgaatttacgtttttaggtacaaaaatggtgttaactctgaggtaaactcggtttctggtaaaatcggaagg 39038608  T
Q  286 tttgacgagtt 296  Q
    ||| |||||||    
T  39038609 tttaacgagtt 39038619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 186 - 323
Target Start/End: Original strand, 18750062 - 18750199
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||  |  |||| |||||||||||||||||||  |||||| |||||||||  ||||||||||| |||||||||||||  |||||    
T  18750062 aaatcgagtgttaactctctgatattactgagtttacgtttttaggtacaaaaatcatgttaactctgaggtaaactcggtttctggtaaaattggaagg 18750161  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcg 323  Q
     || ||||||| ||  | || |||||| ||||||||||    
T  18750162 cttaacgagtttgactgagttaacactcggtaaactcg 18750199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 25049872 - 25049953
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagtt 296  Q
    ||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||| |||||||| ||| |||||| |||||    
T  25049872 gagtttacgtttttaggtaccaaaatcgtgtcaactcggaggtaaactcgatttctagtaaaatcggaatgtttgatgagtt 25049953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 207 - 326
Target Start/End: Original strand, 53835955 - 53836074
Alignment:
Q  207 agtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtg 306  Q
    ||||||| |||||||||| |||||||   |||| |||||||||| | ||||||||| |||||||||||||||| ||| |||||||||||| || || ||     
T  53835955 agtttaccgagtttacgtgtttaggtgctaaaaacgtgttaacttggaggtaaacttgatttctggtaaaatcggaaagtttgacgagtttgaccgagtt 53836054  T
Q  307 aacacttggtaaactcgtgt 326  Q
    ||||||  ||||||||||||    
T  53836055 aacactcagtaaactcgtgt 53836074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 36673933 - 36673791
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||| ||||| || |||  ||||| || |||||| |||  ||||||||||||||||  ||||||| ||| |||||||||||||  |||||    
T  36673933 aaatcgagtgttaaatctccgagattatcgagttgacatttttaagtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaagg 36673834  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||||| | |||||||||||||    
T  36673833 tttaacgagtttgactgagttaacactcgataaactcgtgtaa 36673791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 215 - 324
Target Start/End: Complemental strand, 22489584 - 22489475
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    |||||||||| |||||||  ||||| |||||||| ||  | |||||||||||||||||||||||| |||||||| ||||||| || || || ||||||      
T  22489584 gagtttacgtgtttaggtgccaaaaacgtgttaaatcagatgtaaactcgatttctggtaaaatcggaaggtttaacgagtttgaccgagttaacactca 22489485  T
Q  315 gtaaactcgt 324  Q
    ||||||||||    
T  22489484 gtaaactcgt 22489475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 185 - 276
Target Start/End: Complemental strand, 21718543 - 21718452
Alignment:
Q  185 aaaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaa 276  Q
    ||||||||||||||||||  | | ||||| ||||||||||||| || || ||||||||||| ||||| ||| |||||||||||||| |||||    
T  21718543 aaaatcgagtgttaactcgtcgattttactgagtttacgttttaagataccaaaatcgtgtcaactcaaagataaactcgatttctagtaaa 21718452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 45863242 - 45863307
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactc 251  Q
    |||||||||||||||||||  || |||  |||||||||||||||||||  ||||||||||||||||    
T  45863242 aaatcgagtgttaactctctgagattaaagagtttacgtttttaggtacaaaaatcgtgttaactc 45863307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 323
Target Start/End: Original strand, 42736308 - 42736416
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    |||||| ||||||||| || |||||||||||||||    || ||||||   ||||||||||||||| || |||||||||||| ||||| || |||| | |    
T  42736308 gagtttgcgtttttagataccaaaatcgtgttaacattgagataaacttagtttctggtaaaatcaaaaagtttgacgagtttgatcgagttaacattcg 42736407  T
Q  315 gtaaactcg 323  Q
    |||||||||    
T  42736408 gtaaactcg 42736416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 486
Target Start/End: Original strand, 16155467 - 16155529
Alignment:
Q  424 agttagggttgcgatttcgacggtggaaattcagttttcgacaccgatgattacgacgtcggt 486  Q
    |||||||||||| ||| |||| ||||||||| || ||||||||||| ||||||||||| ||||    
T  16155467 agttagggttgcaattccgacagtggaaatttagatttcgacaccggtgattacgacgccggt 16155529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 328
Target Start/End: Complemental strand, 34483823 - 34483737
Alignment:
Q  242 gtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||||||||||  ||||||| ||| |||||||||||||  |||||||| ||||||| ||  | || |||||| |||||||||||||||    
T  34483823 gtgttaactctgaggtaaaatcggtttctggtaaaatttgaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 34483737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 215 - 324
Target Start/End: Original strand, 37832573 - 37832682
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    ||||||||||||||||||  ||||| ||||| || ||| || ||||||   ||| |||| ||||||||| |||||||||||| || || || ||||| ||    
T  37832573 gagtttacgtttttaggtggcaaaaacgtgtaaattcggagataaacttagtttttggtgaaatcagaaagtttgacgagtttgaccgagttaacacgtg 37832672  T
Q  315 gtaaactcgt 324  Q
     |||||||||    
T  37832673 ttaaactcgt 37832682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 488
Target Start/End: Complemental strand, 4962492 - 4962428
Alignment:
Q  424 agttagggttgcgatttcgacggtggaaattcagttttcgacaccgatgattacgacgtcggtta 488  Q
    |||||||| |||||||  |||||||||||||||  |||||||| |||||||| |||||| |||||    
T  4962492 agttagggctgcgattcagacggtggaaattcatgtttcgacatcgatgattgcgacgttggtta 4962428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 49293804 - 49293885
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagtt 296  Q
    ||||||||||||||||||  ||||| ||| | || | |||  |||||||||||| |||| ||||| ||| ||||||||||||    
T  49293804 gagtttacgtttttaggtggcaaaaacgtataaatttgaaaataaactcgatttttggtgaaatcggaaagtttgacgagtt 49293885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 2118516 - 2118484
Alignment:
Q  236 aaaatcgtgttaactcgaaggtaaactcgattt 268  Q
    |||| ||||||||||||||||||||||||||||    
T  2118516 aaaaacgtgttaactcgaaggtaaactcgattt 2118484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 7e-47; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 186 - 357
Target Start/End: Complemental strand, 47371703 - 47371532
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||||||||||| |||  ||||||  ||||||||||  ||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  47371703 aaatcgagtgttaacactctgagtttatcgagtttacgtacttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtaaaatcggaagg 47371604  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactcaatcgagttttacgagtttccatct 357  Q
    |||| |||||| || || || |||||| ||||||||||||||||||| | |||||||||||||||| |||||    
T  47371603 tttgccgagtttgaccgagttaacactcggtaaactcgtgtaaactcgaccgagttttacgagtttacatct 47371532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 186 - 357
Target Start/End: Complemental strand, 3583684 - 3583513
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||||||||||||   | ||||||||| ||||| |||||||| ||| |    
T  3583684 aaatcgagtgttaactctccgagtttaccgagtttacgtttttaggtaccgaaatcgtgttaacttagaagtaaactcggtttctagtaaaatcggaaag 3583585  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactcaatcgagttttacgagtttccatct 357  Q
    |||||||||||  | || || |||||| |||||||| ||| |||||||| |||||||||||||||| |||||    
T  3583584 tttgacgagtttaaccgagttaacactcggtaaacttgtgcaaactcaaccgagttttacgagtttacatct 3583513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 186 - 331
Target Start/End: Complemental strand, 5494876 - 5494731
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||| ||||||||||||||| || |||| ||||||||||||||||||| |||||||||||||||||  ||||||||||| ||||||||||||||||||||    
T  5494876 aaattgagtgttaactctccgagattaccgagtttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcggtttctggtaaaatcagaagg 5494777  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaact 331  Q
    ||||| ||||| ||  | || |||||| | ||||||||||||||||    
T  5494776 tttgatgagtttgactgagttaacactcgataaactcgtgtaaact 5494731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 186 - 332
Target Start/End: Original strand, 46328406 - 46328552
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||| ||||| || |||| |||||||||||||||||||  ||||||||||||||||  ||||||||||| |||||| ||||||| |||||    
T  46328406 aaatcgagtgttaattctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctgttaaaatcggaagg 46328505  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
    ||| ||||||| ||| | || |||||| |||||||||||||||||||    
T  46328506 tttaacgagtttgattgagttaacactcggtaaactcgtgtaaactc 46328552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 45272987 - 45273129
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||  |||||||||||||||||||  ||||| ||||||||||  ||||||||||| |||||||||||||| |||||    
T  45272987 aaatcgagtgttaactctccgagattatcgagtttacgtttttaggtacaaaaattgtgttaactctgaggtaaactcggtttctggtaaaatcggaagg 45273086  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||||||||||| ||  | || |||||| |||||||||||||||    
T  45273087 tttgacgagtttgactgagttaacactcggtaaactcgtgtaa 45273129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 186 - 342
Target Start/End: Complemental strand, 48966619 - 48966463
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||| ||||||||| | ||||||| |||||||||| |||||||| |||||||||||||||||  ||||||||| |||||||| | ||||  |||||    
T  48966619 aaatcgagggttaactcttcgagtttactgagtttacgtgtttaggtaccaaaatcgtgttaactctgaggtaaacttgatttctgatgaaattggaagg 48966520  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactcaatcgagttt 342  Q
    ||||||||||| || || || || ||| ||||||||||||||||||| | |||||||    
T  48966519 tttgacgagtttgaccgagttaatactcggtaaactcgtgtaaactctaccgagttt 48966463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 186 - 331
Target Start/End: Complemental strand, 49453189 - 49453043
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaa-tcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaag 284  Q
    |||||||||||||||| ||| |||||||  |||||| || |||||||| ||||| ||||||||||||  ||||||||||||||||||| ||||||| |||    
T  49453189 aaatcgagtgttaactgtccgagtttacctagtttatgtgtttaggtaccaaaaatcgtgttaactctgaggtaaactcgatttctggaaaaatcataag 49453090  T
Q  285 gtttgacgagttggatcgggtgaacacttggtaaactcgtgtaaact 331  Q
    ||||||| |||| || || || |||||| ||||||||||||||||||    
T  49453089 gtttgacaagtttgaccgagttaacactcggtaaactcgtgtaaact 49453043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 186 - 329
Target Start/End: Original strand, 9192017 - 9192160
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||| |||| |||||  | ||||||| |||||||||| |||||||   |||| |||||||||||| |||||||||||||||||||||||||||||| |    
T  9192017 aaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcagaaag 9192116  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaa 329  Q
    ||||||||||| || || || ||||||  |||||||||||||||    
T  9192117 tttgacgagtttgaccgagttaacactcagtaaactcgtgtaaa 9192160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 8141011 - 8140869
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||  |||||||||||||||||||  ||||||||||||||||  ||||||| ||||||||||||||||| ||||||    
T  8141011 aaatcgagtgttaactctccgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcgatttctggtaaaattagaagg 8140912  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| | ||||| ||  | || |||||| |||||||| ||||||    
T  8140911 tttaatgagtttgactgagttaacactcggtaaacttgtgtaa 8140869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 15834812 - 15834670
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| |||||||| ||||||||||  ||||||||||||||||  ||||||| ||||||| |||||||||  |||||    
T  15834812 aaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaattcgatttttggtaaaattggaagg 15834713  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||||| |||||||||||||||    
T  15834712 tttaacgagtttgactgagttaacactcggtaaactcgtgtaa 15834670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 186 - 342
Target Start/End: Complemental strand, 5209496 - 5209340
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||||||||||| |||  ||||||  |  ||||||| |||||||| |||||||||||||||||| |||| ||||||||||||||| ||||||||| |    
T  5209496 aaatcgagtgttaacactctgagtttatcgtttttacgtgtttaggtaccaaaatcgtgttaactcggaggtcaactcgatttctggtgaaatcagaaag 5209397  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactcaatcgagttt 342  Q
    ||||||||||| ||||| || ||||||   |||||| ||||||| |||  |||||||    
T  5209396 tttgacgagtttgatcgagttaacactcaataaacttgtgtaaaatcagccgagttt 5209340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 186 - 342
Target Start/End: Complemental strand, 28404074 - 28403918
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||| | | ||||| |||||||| |||||||||| |||||||||||||||| ||||||||| ||| |||||  |||||||  || |    
T  28404074 aaatcgagtgttaactcttcgaatttactgagtttacatttttaggtaccaaaatcgtgttaacttgaaggtaaattcggtttctaataaaatcgaaatg 28403975  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactcaatcgagttt 342  Q
    |||||||| || || || || |||||| ||||||||| ||||||||| | |||||||    
T  28403974 tttgacgaatttgaccgagttaacactcggtaaactcatgtaaactcgaccgagttt 28403918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 186 - 329
Target Start/End: Original strand, 4005060 - 4005203
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||| |||| |||||  | ||||||| |||||||||| |||||||   |||| |||||||||||| |||||||||||||||||||||||||| ||| |    
T  4005060 aaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcggaaag 4005159  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaa 329  Q
    ||||||||||| || || || ||||||  |||||||||||||||    
T  4005160 tttgacgagtttgaccgagttaacactcagtaaactcgtgtaaa 4005203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 186 - 332
Target Start/End: Complemental strand, 38535924 - 38535778
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||||| ||||||||||||| |||| |||||||||||||||| ||  ||||| ||||||||||  ||||||||| | |||||||||||||| ||||     
T  38535924 aaatcgagttttaactctccaagattaccgagtttacgtttttagttacaaaaattgtgttaactctgaggtaaactgggtttctggtaaaatcggaaga 38535825  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
     || ||||||| ||  | || |||||| |||||||||||||||||||    
T  38535824 cttaacgagtttgactgagttaacactcggtaaactcgtgtaaactc 38535778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 186 - 332
Target Start/End: Complemental strand, 38558142 - 38557996
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||||| ||||||||||||| |||| |||||||||||||||| ||  ||||| ||||||||||  ||||||||| | |||||||||||||| ||||     
T  38558142 aaatcgagttttaactctccaagattaccgagtttacgtttttagttacaaaaattgtgttaactctgaggtaaactgggtttctggtaaaatcggaaga 38558043  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
     || ||||||| ||  | || |||||| |||||||||||||||||||    
T  38558042 cttaacgagtttgactgagttaacactcggtaaactcgtgtaaactc 38557996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 186 - 351
Target Start/End: Original strand, 25253486 - 25253651
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||| ||||  ||||||| ||||||| ||||||||||| ||||||||||||||  |  ||||||| ||| ||||||||||| || ||||     
T  25253486 aaatcgagtgttaattctctgagtttaccgagtttatgtttttaggtaccaaaatcgtgttaatactgaggtaaattcggtttctggtaaactcggaaga 25253585  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactcaatcgagttttacgagttt 351  Q
    ||||||||||| ||  | || |||| | ||||||||| ||||||||| |||||||||  |||||||    
T  25253586 tttgacgagtttgactgagttaacattcggtaaactcttgtaaactcgatcgagtttaccgagttt 25253651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 215 - 342
Target Start/End: Complemental strand, 32760198 - 32760071
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    ||||||||||||||||||| |||||||||||||||||  ||||||||||| ||||| |||||||| | ||| || ||||||| || || || ||||||      
T  32760198 gagtttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcggtttctagtaaaatcgggaggcttaacgagtttgaccgagttaacactca 32760099  T
Q  315 gtaaactcgtgtaaactcaatcgagttt 342  Q
     ||||||||||||||||| |||||||||    
T  32760098 ctaaactcgtgtaaactcgatcgagttt 32760071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 186 - 329
Target Start/End: Original strand, 51106885 - 51107028
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||| |||| |||||  | ||||||| |||||||||| |||||||   |||| |||||||||||| ||| |||||||||||||||||||||| ||| |    
T  51106885 aaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggaaaactcgatttctggtaaaatcggaaag 51106984  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaa 329  Q
    ||||||||||| || || || ||||||  |||||||||||||||    
T  51106985 tttgacgagtttgaccgagttaacactcagtaaactcgtgtaaa 51107028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 6312996 - 6313138
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||| ||||| || |||  |||||||| ||||||||||  ||||||||||||||||  ||||||| ||| |||||||||||||  |||||    
T  6312996 aaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaagg 6313095  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||||| |||||||||||||||    
T  6313096 tttaacgagtttgactgagttaacactcggtaaactcgtgtaa 6313138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 25612512 - 25612654
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||| ||||| || |||  |||||||| ||||||||||  ||||||||||||||||  ||||||| ||| |||||||||||||  |||||    
T  25612512 aaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaagg 25612611  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||||| |||||||||||||||    
T  25612612 tttaacgagtttgactgagttaacactcggtaaactcgtgtaa 25612654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 29396212 - 29396070
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||| ||||| || |||  |||||||| ||||||||||  ||||||||||||||||  ||||||| ||| |||||||||||||  |||||    
T  29396212 aaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaagg 29396113  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||||| |||||||||||||||    
T  29396112 tttaacgagtttgactgagttaacactcggtaaactcgtgtaa 29396070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 186 - 326
Target Start/End: Original strand, 41353414 - 41353554
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||| |||| |||||  | ||||||| ||||||| || |||||||   |||| |||||||||||| |||||||||||||||||||||||||| ||| |    
T  41353414 aaatcgcgtgtcaactcggcgagtttaccgagtttatgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcggaaag 41353513  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgt 326  Q
    ||||||||||| || || || ||||||  ||||||||||||    
T  41353514 tttgacgagtttgaccgagttaacactcagtaaactcgtgt 41353554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 51702015 - 51702157
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||| ||||| || |||  |||||||| ||||||||||  ||||| ||||||||||  ||||||| ||| ||||||||||||| | ||||    
T  51702015 aaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaattgtgttaactctgaggtaaaatcggtttctggtaaaattaaaagg 51702114  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||||| |||||||||||||||    
T  51702115 tttaacgagtttgactgagttaacactcggtaaactcgtgtaa 51702157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 52182319 - 52182429
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||||||||||||| || ||||||  |||||||||||||||||||   ||||||||| || ||| ||||||| ||||||||||||||||||  || |    
T  52182319 aaatcgagtgttaactcgccgagtttatcgagtttacgtttttaggtactgaaatcgtgtcaattcggaggtaaattcgatttctggtaaaatcgaaatg 52182418  T
Q  286 tttgacgagtt 296  Q
    |||||||||||    
T  52182419 tttgacgagtt 52182429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 186 - 279
Target Start/End: Complemental strand, 49971724 - 49971631
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatc 279  Q
    ||||||| ||||||||  |  ||||||| ||||||||||||||||||| ||||||||||| |||||| ||||||||||| ||||||||||||||    
T  49971724 aaatcgaatgttaacttactgagtttaccgagtttacgtttttaggtaccaaaatcgtgtcaactcggaggtaaactcgttttctggtaaaatc 49971631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 186 - 322
Target Start/End: Complemental strand, 1243434 - 1243298
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||| |||| |||||  | |||||||  ||||||||| |||||||   |||| |||||||||||| |||||||||||||||||||||||||| ||| |    
T  1243434 aaatcgcgtgtcaactcggcgagtttacctagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcggaaag 1243335  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactc 322  Q
    ||||||||||| || || || ||||||  ||||||||    
T  1243334 tttgacgagtttgaccgagttaacactcagtaaactc 1243298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 186 - 326
Target Start/End: Original strand, 8147310 - 8147450
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||| |||| |||||  | ||||||| |||||||||| |||||||   |||| |||||||||||| |||||||||||||||||||||||||   || |    
T  8147310 aaatcgcgtgtcaactcagcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaaaattgcaaag 8147409  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgt 326  Q
    ||||||||||| || || || ||||||  ||||||||||||    
T  8147410 tttgacgagtttgaccgagttaacactcagtaaactcgtgt 8147450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 186 - 326
Target Start/End: Original strand, 26757608 - 26757748
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||| |||| |||||  | ||||||| |||||||||| |||||||   |||| || ||||||||  |||||||||||||||||||||||||| ||| |    
T  26757608 aaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgagttaactcagaggtaaactcgatttctggtaaaatcggaaag 26757707  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgt 326  Q
    ||||||||||| || || || ||||||  ||||||||||||    
T  26757708 tttgacgagtttgaccgagttaacactcagtaaactcgtgt 26757748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 215 - 322
Target Start/End: Original strand, 7798522 - 7798629
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    ||||||||||||||||||  ||||| |||||||||||| ||||||||||| ||| |||| ||||| ||| |||||||||||| || || |||||||| ||    
T  7798522 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtg 7798621  T
Q  315 gtaaactc 322  Q
     |||||||    
T  7798622 ttaaactc 7798629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 235 - 342
Target Start/End: Complemental strand, 42304579 - 42304472
Alignment:
Q  235 caaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactcaa 334  Q
    ||||||| |||||| ||| ||||||||||| |||||||||||||  |||||||| ||||||| || || || |||||| ||||||||||||||||||| |    
T  42304579 caaaatcatgttaattcggaggtaaactcggtttctggtaaaattggaaggtttaacgagtttgaccgagttaacactaggtaaactcgtgtaaactcga 42304480  T
Q  335 tcgagttt 342  Q
     |||||||    
T  42304479 ccgagttt 42304472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 48177221 - 48177078
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactc-gatttctggtaaaatcagaag 284  Q
    ||||||||| |||||||||  || |||| |||||||||||||||||||  ||||||||||||||||  ||||||| || | |||||||||||||  ||||    
T  48177221 aaatcgagtattaactctctgagattactgagtttacgtttttaggtagaaaaatcgtgttaactctgaggtaaaatcggttttctggtaaaattggaag 48177122  T
Q  285 gtttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    |||| ||||||| ||  | || ||||||  ||||||||||||||    
T  48177121 gtttaacgagtttgactgagttaacactcagtaaactcgtgtaa 48177078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 25831027 - 25830885
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| |||||||||||||||||||  ||||||||||||||||  || |||| ||| || ||  ||||||  |||||    
T  25831027 aaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgagataaaatcggttcctaataaaattggaagg 25830928  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || ||||||  ||||||||||||||    
T  25830927 tttaacgagtttgactgagttaacactcagtaaactcgtgtaa 25830885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 186 - 296
Target Start/End: Complemental strand, 27257986 - 27257876
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||| ||||||||||| || ||||||  || |||||||||||||||| ||||||||||| |||||  ||||||||| |||||  ||||||||| ||| |    
T  27257986 aaatctagtgttaactcgccgagtttaatgaatttacgtttttaggtaccaaaatcgtgtcaactccgaggtaaacttgattttcggtaaaatcggaatg 27257887  T
Q  286 tttgacgagtt 296  Q
    |||||||||||    
T  27257886 tttgacgagtt 27257876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 186 - 323
Target Start/End: Complemental strand, 35177339 - 35177201
Alignment:
Q  186 aaatcgagtgtt-aactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaag 284  Q
    |||||||||||| ||| |||| ||||||   | |||| ||||||||||| |||||||||||||| ||  |||||||||||||||||| ||||||| ||||    
T  35177339 aaatcgagtgtttaacactccgagtttatcaaatttatgtttttaggtaccaaaatcgtgttaattcagaggtaaactcgatttctgataaaatcggaag 35177240  T
Q  285 gtttgacgagttggatcgggtgaacacttggtaaactcg 323  Q
    | |||||||||| || || || |||||| | ||||||||    
T  35177239 gattgacgagtttgaccgagttaacactcgataaactcg 35177201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 3593268 - 3593349
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagtt 296  Q
    |||||||  ||||||||||||||||||||||||||||| ||||||| |||||||||  ||||||| ||||||||||| ||||    
T  3593268 gagtttatatttttaggtatcaaaatcgtgttaactcggaggtaaattcgatttctaataaaatcggaaggtttgacaagtt 3593349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 186 - 291
Target Start/End: Complemental strand, 9322286 - 9322181
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||| ||||| || |||  |||||||| ||||||||||  ||||||||||||||||  ||||||| ||| |||||||||||||  |||||    
T  9322286 aaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaagg 9322187  T
Q  286 tttgac 291  Q
    ||||||    
T  9322186 tttgac 9322181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 215 - 326
Target Start/End: Complemental strand, 11579199 - 11579088
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    |||||||||| |||||||   |||| |||||||||||| ||||||| | |||||||||||||||| ||| |||||||||||| || || || ||||||      
T  11579199 gagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaatttgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacactca 11579100  T
Q  315 gtaaactcgtgt 326  Q
    ||||||||||||    
T  11579099 gtaaactcgtgt 11579088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 221 - 332
Target Start/End: Complemental strand, 33886953 - 33886843
Alignment:
Q  221 acgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggtaaac 320  Q
    ||||||||||||  ||||| |||||||||||| ||||||||||| ||| |||| ||||| ||| |||||||||||| || || |||||||| || |||||    
T  33886953 acgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaac 33886854  T
Q  321 tcgtgtaaactc 332  Q
    ||| ||||||||    
T  33886853 tcg-gtaaactc 33886843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 221 - 332
Target Start/End: Original strand, 33957297 - 33957407
Alignment:
Q  221 acgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggtaaac 320  Q
    ||||||||||||  ||||| |||||||||||| ||||||||||| ||| |||| ||||| ||| |||||||||||| || || |||||||| || |||||    
T  33957297 acgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaac 33957396  T
Q  321 tcgtgtaaactc 332  Q
    ||| ||||||||    
T  33957397 tcg-gtaaactc 33957407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 215 - 328
Target Start/End: Original strand, 18798901 - 18799014
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    |||||||| ||||||||||  ||||||||||||||||  ||||||| ||| |||||||||||||  |||||||| ||||| | ||  | || |||||| |    
T  18798901 gagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagattgactgagttaacactcg 18799000  T
Q  315 gtaaactcgtgtaa 328  Q
    ||||||||||||||    
T  18799001 gtaaactcgtgtaa 18799014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 49231456 - 49231537
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagtt 296  Q
    ||||||| |||||||||||  ||||||||||||||||  ||||||||||| ||||||||| |||| |||||||| |||||||    
T  49231456 gagtttatgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggtataatcggaaggtttaacgagtt 49231537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 186 - 296
Target Start/End: Complemental strand, 49237094 - 49236984
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||||||||||  || | ||||||  ||||||| || |||||||| ||||| |||||||| ||| || ||| |||| ||||||||||||||  ||||    
T  49237094 aaatcgagtgttaatacttcgagtttatcgagtttatgtgtttaggtaccaaaaccgtgttaattcggagttaagctcggtttctggtaaaatcgaaagg 49236995  T
Q  286 tttgacgagtt 296  Q
    |||||||||||    
T  49236994 tttgacgagtt 49236984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 1108374 - 1108455
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagtt 296  Q
    ||||||||||||||||||   |||| ||||| |||||| ||||||||||| ||| |||| ||||| ||| ||||||||||||    
T  1108374 gagtttacgtttttaggtggtaaaaacgtgtaaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtt 1108455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 342
Target Start/End: Original strand, 15927292 - 15927448
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||||||||||  ||   ||||||  ||||||| || |||| ||| |||||| ||||||||||  ||||||| ||| |||||| ||||||| ||| |    
T  15927292 aaatcgagtgttaatactttgagtttatcgagtttaagtgtttaagtaccaaaattgtgttaactctgaggtaaattcggtttctgataaaatcggaaag 15927391  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactcaatcgagttt 342  Q
    ||||||||||| ||  | || |||| | | ||||||  ||||||||||| |||||||    
T  15927392 tttgacgagtttgactgagttaacattcgataaactattgtaaactcaaccgagttt 15927448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 291
Target Start/End: Original strand, 18954487 - 18954563
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgac 291  Q
    ||||||||||||||||||  ||||| |||||||||||| | ||||||||| ||| |||| ||||| ||| |||||||    
T  18954487 gagtttacgtttttaggtggcaaaaacgtgttaactcggacgtaaactcggtttttggtgaaatcggaaagtttgac 18954563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 424 - 488
Target Start/End: Complemental strand, 32759883 - 32759819
Alignment:
Q  424 agttagggttgcgatttcgacggtggaaattcagttttcgacaccgatgattacgacgtcggtta 488  Q
    |||||||||||||||| |||||||| |||||||| ||||||| ||| ||||| |||| |||||||    
T  32759883 agttagggttgcgattccgacggtgaaaattcagatttcgacgccggtgattgcgacatcggtta 32759819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 215 - 294
Target Start/End: Original strand, 34019141 - 34019220
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgag 294  Q
    ||||||||||||| ||||  |||||  ||||||||||| ||||||| ||||||| |||| ||||| ||| ||||||||||    
T  34019141 gagtttacgttttaaggtggcaaaaatgtgttaactcggaggtaaattcgatttttggtgaaatcggaaagtttgacgag 34019220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 426 - 492
Target Start/End: Complemental strand, 49236777 - 49236711
Alignment:
Q  426 ttagggttgcgatttcgacggtggaaattcagttttcgacaccgatgattacgacgtcggttatggt 492  Q
    ||||||||||||||||||||||| |||||||| |||||||  |||||||| | |||  |||||||||    
T  49236777 ttagggttgcgatttcgacggtgaaaattcagatttcgacgtcgatgattgcaacgctggttatggt 49236711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 215 - 332
Target Start/End: Complemental strand, 34751671 - 34751555
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    |||||||||||||||  |  ||||| |||||||||||| ||||||||||| ||| |||| ||||| ||| ||||| | |||| || || || ||||| ||    
T  34751671 gagtttacgtttttaaatggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgccaagtttgaccgagttaacacgtg 34751572  T
Q  315 gtaaactcgtgtaaactc 332  Q
     |||||||| ||||||||    
T  34751571 ttaaactcg-gtaaactc 34751555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 2293475 - 2293407
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaa 283  Q
    ||||||||||| ||||||  ||||||||||| |||||||||||| ||||  ||| || |||||||||||    
T  2293475 gagtttacgttgttaggtgccaaaatcgtgtaaactcgaaggtagactcattttttgataaaatcagaa 2293407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 428 - 488
Target Start/End: Complemental strand, 35177046 - 35176986
Alignment:
Q  428 agggttgcgatttcgacggtggaaattcagttttcgacaccgatgattacgacgtcggtta 488  Q
    |||||||||||| ||||||||||||||||| |||||||  || ||||| ||||| ||||||    
T  35177046 agggttgcgattccgacggtggaaattcagatttcgacgtcggtgattgcgacgccggtta 35176986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 8122211 - 8122274
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaat 278  Q
    |||||||||||||||  || ||||||||||| ||||||||  |||||||| ||| |||||||||    
T  8122211 gagtttacgtttttaaataccaaaatcgtgtaaactcgaacttaaactcgttttttggtaaaat 8122274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 21248573 - 21248539
Alignment:
Q  216 agtttacgtttttaggtatcaaaatcgtgttaact 250  Q
    ||||||||||||||||| |||||||||||||||||    
T  21248573 agtttacgtttttaggtgtcaaaatcgtgttaact 21248539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 471
Target Start/End: Complemental strand, 48966274 - 48966225
Alignment:
Q  422 ctagttagggttgcgatttcgacggtggaaattcagttttcgacaccgat 471  Q
    ||||||| |||||| ||| ||||||||||||||||  |||||||||||||    
T  48966274 ctagttatggttgcaattccgacggtggaaattcaaatttcgacaccgat 48966225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 1e-45; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 186 - 351
Target Start/End: Original strand, 16438678 - 16438843
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| ||||||  |||||||||||||||||||  ||||||||||||||| | |||||||||||| ||||||||||||| |||||    
T  16438678 aaatcgagtgttaactctccgagtttatcgagtttacgtttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaagg 16438777  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactcaatcgagttttacgagttt 351  Q
    |||||||||||  |||| || | |||| ||||||||||||||||||| |||||||||  |||||||    
T  16438778 tttgacgagtttaatcgagttagcactcggtaaactcgtgtaaactcgatcgagtttagcgagttt 16438843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 186 - 357
Target Start/End: Original strand, 2606867 - 2607038
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||| ||||||||||   ||||||| |||||||||| |||||| | ||||||||| |||||||  ||||||||||||||||||||||||||||||||    
T  2606867 aaatcgaatgttaactctttgagtttactgagtttacgtgtttaggcaccaaaatcgttttaactctgaggtaaactcgatttctggtaaaatcagaagg 2606966  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactcaatcgagttttacgagtttccatct 357  Q
    ||||| ||||| || || || ||||||   ||||||| | ||||||| | |||||||||||||||| |||||    
T  2606967 tttgatgagtttgaccgagttaacactcaataaactcttataaactcgaccgagttttacgagtttacatct 2607038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 186 - 323
Target Start/End: Complemental strand, 31975780 - 31975643
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||| |||||||||||||| ||||||| ||||||| || |||||||| |||||||||||||||||  ||||||||||||||||| |||||||| |||||    
T  31975780 aaatcaagtgttaactctccgagtttactgagtttatgtgtttaggtaccaaaatcgtgttaactctgaggtaaactcgatttcttgtaaaatcggaagg 31975681  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcg 323  Q
    ||||||||||| || || || || ||| ||||||||||    
T  31975680 tttgacgagtttgaccgagttaagactcggtaaactcg 31975643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 186 - 329
Target Start/End: Complemental strand, 1463799 - 1463656
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||| |||| |||||  | ||||||| |||||||||| |||||||   |||| |||||||||||| |||||||||||||||||||||||||| ||| |    
T  1463799 aaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcggaaag 1463700  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaa 329  Q
    ||||||||||| || || || ||||||  |||||||||||||||    
T  1463699 tttgacgagtttgaccgagttaacactcagtaaactcgtgtaaa 1463656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 186 - 329
Target Start/End: Original strand, 3000212 - 3000355
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||| ||||||||||| || ||||||| || ||||||| |||||||| ||||||||||||||||||  |||||| ||||||| |||||||||| | | |    
T  3000212 aaatcaagtgttaactcgccgagtttactgattttacgtgtttaggtaccaaaatcgtgttaactcgggggtaaattcgatttatggtaaaatcgggaag 3000311  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaa 329  Q
    ||||||||||| ||||| || ||||||   ||||||||||||||    
T  3000312 tttgacgagtttgatcgagttaacactcaataaactcgtgtaaa 3000355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 186 - 329
Target Start/End: Original strand, 6788072 - 6788215
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||| |||| |||||  | ||||||| |||||||||| |||||||   |||| |||||||||||| |||||||||||||||||||||||||| ||| |    
T  6788072 aaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcggaaag 6788171  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaa 329  Q
    ||||||||||| || || || ||||||  |||||||||||||||    
T  6788172 tttgacgagtttgaccgagttaacactcagtaaactcgtgtaaa 6788215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 30384845 - 30384703
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| ||||||| |||||||||||  |||||||||||||||| |||||||| ||  |||||| ||||||  |||||    
T  30384845 aaatcgagtgttaactctccgagattaccgagtttatgtttttaggtacaaaaatcgtgttaactctaaggtaaaatcagtttctgataaaattggaagg 30384746  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||||| |||||||||||||||    
T  30384745 tttaacgagtttgactgagttaacactcggtaaactcgtgtaa 30384703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 13461374 - 13461455
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagtt 296  Q
    ||||||||||||||| ||||||||||||||| |||||| ||||||||||| ||| |||||||||||||| ||||||||||||    
T  13461374 gagtttacgtttttatgtatcaaaatcgtgtcaactcggaggtaaactcggtttttggtaaaatcagaatgtttgacgagtt 13461455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 7497518 - 7497628
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||| |||||||||||| || |||   ||||||||||||||||||  ||||||||||||||||  ||||||||||| |||||||||||||  |||||    
T  7497518 aaatcgaatgttaactctccgagattatcaagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggtaaaattggaagg 7497617  T
Q  286 tttgacgagtt 296  Q
    ||| |||||||    
T  7497618 tttaacgagtt 7497628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 296
Target Start/End: Complemental strand, 14262217 - 14262107
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||   ||||||| ||||||||||  ||||||||||||||||  ||||||| |||||||||||||||||  |||||    
T  14262217 aaatcgagtgttaactctccgagattatctagtttacttttttaggtacaaaaatcgtgttaactctgaggtaaaatcgatttctggtaaaattggaagg 14262118  T
Q  286 tttgacgagtt 296  Q
    ||| |||||||    
T  14262117 tttaacgagtt 14262107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 31896057 - 31896199
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||| ||||| || |||  |||| ||| ||||||||||  ||||||||||||||||  ||||||| ||| |||||||||||||  |||||    
T  31896057 aaatcgagtgttaaatctccgagattatcgagtatacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaagg 31896156  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||||| |||||||||||||||    
T  31896157 tttaacgagtttgactgagttaacactcggtaaactcgtgtaa 31896199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 186 - 323
Target Start/End: Original strand, 31067852 - 31067989
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||| ||||| || |||  |||||||| ||||||||||  ||||||||||||||||  ||||||| ||| |||||||||||||  |||||    
T  31067852 aaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaagg 31067951  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcg 323  Q
    ||| ||||||| ||  | || |||||| ||||||||||    
T  31067952 tttaacgagtttgactgagttaacactcggtaaactcg 31067989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 31535159 - 31535078
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagtt 296  Q
    |||||||| ||||||||||||||||| ||||||||||  ||| ||||||||||||||||||||||  |||||||||||||||    
T  31535159 gagtttacatttttaggtatcaaaattgtgttaactctgaggcaaactcgatttctggtaaaatcgaaaggtttgacgagtt 31535078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 215 - 332
Target Start/End: Complemental strand, 31996347 - 31996231
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    ||||||||||||||||||  ||||| |||||||||||| ||||||||||||||| |||| ||||| ||| |||||||||||| || || || ||||| ||    
T  31996347 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgagttaacacgtg 31996248  T
Q  315 gtaaactcgtgtaaactc 332  Q
     |||||||| ||||||||    
T  31996247 ttaaactcg-gtaaactc 31996231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 28900937 - 28900863
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttg 289  Q
    |||||||| | |||||||| |||||||||||||||||  |||||||||||||||||||||||||| |||||||||    
T  28900937 gagtttacatgtttaggtaccaaaatcgtgttaactctgaggtaaactcgatttctggtaaaatcggaaggtttg 28900863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 21199556 - 21199636
Alignment:
Q  216 agtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagtt 296  Q
    |||||||||||||||||  ||||| ||||||||||| |||||||||||||||| |||| ||||| ||| ||||||||||||    
T  21199556 agtttacgtttttaggtggcaaaaccgtgttaactccaaggtaaactcgatttttggtgaaatcggaaagtttgacgagtt 21199636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 296
Target Start/End: Complemental strand, 10113908 - 10113798
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||| |||| |||||  | ||||||| |||||||||| |||||||   |||| |||||||||||| ||||||||||| ||| |||||||||| ||| |    
T  10113908 aaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtcctaaaaacgtgttaactcggaggtaaactcgttttttggtaaaatcggaaag 10113809  T
Q  286 tttgacgagtt 296  Q
    |||||||||||    
T  10113808 tttgacgagtt 10113798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 186 - 323
Target Start/End: Complemental strand, 4200232 - 4200095
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||| ||||| || |||  |||||||| |||||| |||  |||||| |||||||||  ||||||| ||| |||||||||||||  |||||    
T  4200232 aaatcgagtgttaaatctccgagattatcgagtttacatttttaagtacaaaaatcatgttaactctgaggtaaaatcggtttctggtaaaattggaagg 4200133  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcg 323  Q
    ||| ||||||| ||  | || |||||| ||||||||||    
T  4200132 tttaacgagtttgactgagttaacactcggtaaactcg 4200095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 8779680 - 8779599
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagtt 296  Q
    ||||||||||||||||||  ||||| |||||||||||| ||||||||||| ||| |||| ||||| ||| ||||||||||||    
T  8779680 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtt 8779599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 186 - 288
Target Start/End: Complemental strand, 34758860 - 34758758
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||| ||||||||||| || |||   ||||||||||||||||||  ||||||||||||||||  ||||||| ||| |||||| ||||||  |||||    
T  34758860 aaatcgagcgttaactctccgagattatcaagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctgataaaattggaagg 34758761  T
Q  286 ttt 288  Q
    |||    
T  34758760 ttt 34758758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 424 - 471
Target Start/End: Complemental strand, 31534865 - 31534818
Alignment:
Q  424 agttagggttgcgatttcgacggtggaaattcagttttcgacaccgat 471  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||    
T  31534865 agttagggttgcgatttcgacggtggaaattcagatttcgacgccgat 31534818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 226 - 291
Target Start/End: Complemental strand, 33641376 - 33641311
Alignment:
Q  226 tttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgac 291  Q
    ||||||||||||||||||||||||||  | |||||||| |||  ||||||||||| ||||||||||    
T  33641376 tttaggtatcaaaatcgtgttaactctgatgtaaactcaattaatggtaaaatcataaggtttgac 33641311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 291
Target Start/End: Complemental strand, 7835463 - 7835387
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgac 291  Q
    ||||||||||||||||||  ||||| |||||||| ||| ||||||||||| ||| |||| ||||| ||| |||||||    
T  7835463 gagtttacgtttttaggtggcaaaaacgtgttaagtcggaggtaaactcggtttttggtgaaatcggaaagtttgac 7835387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 424 - 491
Target Start/End: Complemental strand, 31975422 - 31975355
Alignment:
Q  424 agttagggttgcgatttcgacggtggaaattcagttttcgacaccgatgattacgacgtcggttatgg 491  Q
    |||||||||||||||| ||| ||||||||||||  ||| ||||||| |||||||||||  ||||||||    
T  31975422 agttagggttgcgattccgaaggtggaaattcatattttgacaccggtgattacgacgctggttatgg 31975355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 328
Target Start/End: Original strand, 34773873 - 34773947
Alignment:
Q  254 aggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||||||| ||| |||||||||||||  |||||||| ||||||| ||  | || |||||| |||||||||||||||    
T  34773873 aggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 34773947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 21010976 - 21010895
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagtt 296  Q
    |||||| | ||||||||| | |||  |||||||| |||||||| |||||| ||| |||| |||||| || ||||||||||||    
T  21010976 gagtttgcatttttaggtgttaaatacgtgttaattcgaaggtcaactcggtttttggtgaaatcaaaatgtttgacgagtt 21010895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 342
Target Start/End: Original strand, 24194469 - 24194542
Alignment:
Q  270 tggtaaaatcagaaggtttgacgagt-tggatcgggtgaacacttggtaaactcgtgtaaactcaatcgagttt 342  Q
    |||||||||  ||| ||||||||||| | || || || |||||| |||||||||||||||| ||||||||||||    
T  24194469 tggtaaaattggaaagtttgacgagtattgaccgagttaacactcggtaaactcgtgtaaattcaatcgagttt 24194542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 432 - 488
Target Start/End: Original strand, 2607234 - 2607290
Alignment:
Q  432 ttgcgatttcgacggtggaaattcagttttcgacaccgatgattacgacgtcggtta 488  Q
    |||||||| ||||||||||||||||  |||||||| || ||||| ||||| ||||||    
T  2607234 ttgcgattccgacggtggaaattcatatttcgacatcggtgattgcgacgccggtta 2607290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 424 - 456
Target Start/End: Complemental strand, 28900613 - 28900581
Alignment:
Q  424 agttagggttgcgatttcgacggtggaaattca 456  Q
    ||||||||||| |||||||||||||||||||||    
T  28900613 agttagggttgtgatttcgacggtggaaattca 28900581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 3e-40; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 186 - 342
Target Start/End: Complemental strand, 8029969 - 8029813
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||| | ||||||  |||||||||| |||||||| |||||||||||||||||  || ||||||||||||||||||||||| |||||    
T  8029969 aaatcgagtgttaactcttcgagtttatcgagtttacgtgtttaggtaccaaaatcgtgttaactctgagataaactcgatttctggtaaaatcggaagg 8029870  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactcaatcgagttt 342  Q
    ||||||||||| || || || |||||| |||||| |||||||||||| | |||||||    
T  8029869 tttgacgagtttgaccgagttaacactcggtaaaatcgtgtaaactcgaccgagttt 8029813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 186 - 338
Target Start/End: Original strand, 31625729 - 31625881
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| |||||||| ||||||||||  ||||| ||||||||||  ||||||||||| |||||||||||||| |||||    
T  31625729 aaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaattgtgttaactctgaggtaaactcggtttctggtaaaatcggaagg 31625828  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactcaatcga 338  Q
    ||| ||||||| ||  | || |||||| ||||||||||||||||||| |||||    
T  31625829 tttaacgagtttgactgagttaacactcggtaaactcgtgtaaactcgatcga 31625881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 186 - 329
Target Start/End: Original strand, 26856526 - 26856669
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| ||||||| |||| ||||||  ||||||||||||||||  ||||||||||| ||||||||||||||||||||    
T  26856526 aaatcgagtgttaactctccgagattaccgagtttatgtttataggtacaaaaatcgtgttaactctgaggtaaactcggtttctggtaaaatcagaagg 26856625  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaa 329  Q
    ||| ||||||| ||  | || |||||| ||||||||||||||||    
T  26856626 tttaacgagtttgactgagttaacactcggtaaactcgtgtaaa 26856669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 186 - 332
Target Start/End: Original strand, 32497962 - 32498108
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||| ||||||||||||||| || |||| |||||||||||||||||||  ||||||||||||||||  ||||||||||| ||||| |||||||| |||||    
T  32497962 aaattgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctagtaaaatcggaagg 32498061  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
    ||| |||  || ||| | || |||||| |||||||||||||||||||    
T  32498062 tttaacggatttgattgagttaacactaggtaaactcgtgtaaactc 32498108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 186 - 323
Target Start/End: Complemental strand, 10295119 - 10294982
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| |||||||||||||||||||  | ||||||||||||||  ||||||||||| |||||||||||||| |||||    
T  10295119 aaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaacaatcgtgttaactctgaggtaaactcggtttctggtaaaatcggaagg 10295020  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcg 323  Q
    ||| ||||||| ||  | || |||||| ||||||||||    
T  10295019 tttaacgagtttgactgagttaacactcggtaaactcg 10294982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 186 - 294
Target Start/End: Complemental strand, 12522636 - 12522528
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| |||||||  ||||| | |||||||||| |||||||||||||||||  ||||||||||| |||||||||||||| |||||    
T  12522636 aaatcgagtgttaactctccgagtttactaagtttgcatttttaggtaccaaaatcgtgttaactcagaggtaaactcggtttctggtaaaatcggaagg 12522537  T
Q  286 tttgacgag 294  Q
    |||||||||    
T  12522536 tttgacgag 12522528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 18305756 - 18305614
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| ||| |||||||||||||||  ||||||||||||||||  ||||||| ||| |||||||||||||  |||||    
T  18305756 aaatcgagtgttaactctccgagattaccgagcttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaagg 18305657  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| | ||||| ||  | || |||||| |||||||||||||||    
T  18305656 tttaaagagtttgactgagttaacactcggtaaactcgtgtaa 18305614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 39467298 - 39467156
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| | |||||||||||||||||  |||||||| ||||||| |||||||| | |||||||||||||||  |||||    
T  39467298 aaatcgagtgttaactctccgagattaccgcgtttacgtttttaggtacaaaaatcgtattaactctaaggtaaaattgatttctggtaaaattggaagg 39467199  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    |||  |||||| ||  | || |||||| |||||||||||||||    
T  39467198 tttagcgagtttgactgagttaacactcggtaaactcgtgtaa 39467156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 42305384 - 42305242
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| |||||||| ||||||||||| ||||||||||||||||  ||||||| ||| |||||||||||||  |||||    
T  42305384 aaatcgagtgttaactctccgagattaccgagtttacctttttaggtataaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaagg 42305285  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||| | ||  | || |||| | |||||||||||||||    
T  42305284 tttaacgagattgactgagttaacattcggtaaactcgtgtaa 42305242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 220 - 357
Target Start/End: Complemental strand, 27878729 - 27878592
Alignment:
Q  220 tacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggtaaa 319  Q
    ||||| |||||||| |||||||||||||||||| | ||||| ||| |||||||||||||| | |||||||||||||| ||| | || |||||| | | ||    
T  27878729 tacgtgtttaggtaccaaaatcgtgttaactcggatgtaaattcggtttctggtaaaatcggtaggtttgacgagtttgatagagttaacactcgatgaa 27878630  T
Q  320 ctcgtgtaaactcaatcgagttttacgagtttccatct 357  Q
    ||||||||||||| | |||||||||| ||||| |||||    
T  27878629 ctcgtgtaaactcgaccgagttttacaagtttacatct 27878592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 220 - 357
Target Start/End: Complemental strand, 28018910 - 28018773
Alignment:
Q  220 tacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggtaaa 319  Q
    ||||| |||||||| |||||||||||||||||| | ||||| ||| |||||||||||||| | |||||||||||||| ||| | || |||||| | | ||    
T  28018910 tacgtgtttaggtaccaaaatcgtgttaactcggatgtaaattcggtttctggtaaaatcggtaggtttgacgagtttgatagagttaacactcgatgaa 28018811  T
Q  320 ctcgtgtaaactcaatcgagttttacgagtttccatct 357  Q
    ||||||||||||| | |||||||||| ||||| |||||    
T  28018810 ctcgtgtaaactcgaccgagttttacaagtttacatct 28018773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 186 - 296
Target Start/End: Complemental strand, 9288274 - 9288164
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||| | || |||| |||||||||||||||||||  ||||||||||||||||  ||||||| ||| |||||||||||||  |||||    
T  9288274 aaatcgagtgttaactcttcgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaagg 9288175  T
Q  286 tttgacgagtt 296  Q
    ||| |||||||    
T  9288174 tttaacgagtt 9288164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 19717654 - 19717512
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| |||||||| ||||||||||  ||||||||||||||||  ||||||| ||| |||||||||||||  |||||    
T  19717654 aaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaagg 19717555  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||| | ||  | || |||||| |||||||| ||||||    
T  19717554 tttaacgagattgactgagttaacactcggtaaacttgtgtaa 19717512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 186 - 326
Target Start/End: Original strand, 19484187 - 19484327
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||| |||| |||||  | ||||||| ||||||| || |||||||   |||| |||||||||||| |||||||||||||||||||||||||| ||| |    
T  19484187 aaatcgcgtgtcaactcggcgagtttaccgagtttatgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcggaaag 19484286  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgt 326  Q
    ||||||||||| || || || ||||||  ||||||||||||    
T  19484287 tttgacgagtttgaccgagttaacactcagtaaactcgtgt 19484327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 7760780 - 7760890
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||||||||||||   | ||||||| |||||||  |||||||||||||||||||||| |||||||||||||| | |||||||| |||||||| |  |    
T  7760780 aaatcgagtgttaacttatcgagtttactgagtttatatttttaggtatcaaaatcgtgtcaactcgaaggtaaatttgatttctgataaaatcaaattg 7760879  T
Q  286 tttgacgagtt 296  Q
    |||||||||||    
T  7760880 tttgacgagtt 7760890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 14781912 - 14781770
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||| ||||| || |||  ||||| || ||||||||||| ||||||||||||||||  ||||||| ||| |||||||||||||  |||||    
T  14781912 aaatcgagtgttaaatctccgagattatcgagttgacatttttaggtataaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaagg 14781813  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || ||||||  ||||||||||||||    
T  14781812 tttaacgagtttgactgagttaacactcagtaaactcgtgtaa 14781770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 17234686 - 17234796
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||| ||||||||| |  |||||||  ||||| |||||||||||| ||||||| | | |||||| |||||||||||||||||||||||||| ||| |    
T  17234686 aaatcgaatgttaactcgctgagtttaccaagtttgcgtttttaggtaccaaaatcctatcaactcggaggtaaactcgatttctggtaaaatcggaatg 17234785  T
Q  286 tttgacgagtt 296  Q
    |||||||||||    
T  17234786 tttgacgagtt 17234796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 18958507 - 18958365
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| |||||||| ||||||||||  ||||||||||||||||  ||||||| | | |||||||||||||  |||||    
T  18958507 aaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaattggtttctggtaaaattggaagg 18958408  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| || || | ||  | || |||||| |||||||||||||||    
T  18958407 tttaacaagattgactgagttaacactcggtaaactcgtgtaa 18958365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 37131386 - 37131305
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagtt 296  Q
    |||||||| |||||||||| ||||||||||| |||||| |||||||||||| ||||||||||||||||| |||||| |||||    
T  37131386 gagtttacatttttaggtaccaaaatcgtgtcaactcggaggtaaactcgacttctggtaaaatcagaatgtttgaagagtt 37131305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 186 - 329
Target Start/End: Original strand, 16364127 - 16364270
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||||||||||||||   || |||  || ||||||||||||||||  |||||||||||||||| |||||||| ||| ||||| |||||||| |||||    
T  16364127 aaatcgagtgttaactctatgagattatcgaatttacgtttttaggtacaaaaatcgtgttaactctaaggtaaattcggtttctagtaaaatcggaagg 16364226  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaa 329  Q
    ||| ||||||| ||     | |||||| ||||||||||||||||    
T  16364227 tttaacgagtttgactaaattaacactcggtaaactcgtgtaaa 16364270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 218 - 357
Target Start/End: Complemental strand, 27915675 - 27915536
Alignment:
Q  218 tttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggta 317  Q
    ||||||| |||| ||| |||||||||||||||||  |  |||| |||||||||| ||||||| | |||||||||||||| || || || |||||| | |     
T  27915675 tttacgtgtttatgtaccaaaatcgtgttaactcagatttaaattcgatttctgataaaatcggtaggtttgacgagtttgaccgagttaacactcgatg 27915576  T
Q  318 aactcgtgtaaactcaatcgagttttacgagtttccatct 357  Q
    ||||||||||||||| | |||||||||| ||||| |||||    
T  27915575 aactcgtgtaaactcgaccgagttttacaagtttacatct 27915536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 218 - 357
Target Start/End: Complemental strand, 27962094 - 27961955
Alignment:
Q  218 tttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggta 317  Q
    ||||||| |||| ||| |||||||||||||||||  |  |||| |||||||||| ||||||| | |||||||||||||| || || || |||||| | |     
T  27962094 tttacgtgtttatgtaccaaaatcgtgttaactcagatttaaattcgatttctgataaaatcggtaggtttgacgagtttgaccgagttaacactcgatg 27961995  T
Q  318 aactcgtgtaaactcaatcgagttttacgagtttccatct 357  Q
    ||||||||||||||| | |||||||||| ||||| |||||    
T  27961994 aactcgtgtaaactcgaccgagttttacaagtttacatct 27961955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 216 - 323
Target Start/End: Original strand, 41393958 - 41394065
Alignment:
Q  216 agtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttgg 315  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||  |||||| |||||||  |||||||||| | || |||||  | |||||| ||    
T  41393958 agtttacgtttttaggtatcaaaatcgtgttaattcggaggtaaactcagtttctgataaaatcgaaaggtttgacaaatttgatcgtattaacactcgg 41394057  T
Q  316 taaactcg 323  Q
    ||||||||    
T  41394058 taaactcg 41394065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 43166456 - 43166314
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||| | | | || |||| |||||||||||||||||||  ||||||||||||||||  ||||||| |   |||||||||||||   ||||    
T  43166456 aaatcgagtgttaatttttcgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaataagtttctggtaaaattgaaagg 43166357  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||||||||||| ||  | || |||||| |||||||||||||||    
T  43166356 tttgacgagtttgactgagttaacactcggtaaactcgtgtaa 43166314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 43308288 - 43308146
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||| | || |||  |||||| |||||||||||| |||||||||||||||||  |  |||| ||| |||||||||||||  |||||    
T  43308288 aaatcgagtgttaactcttcgagattatcgagtttgcgtttttaggtaccaaaatcgtgttaactctgatataaaatcggtttctggtaaaattggaagg 43308189  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| || |||| ||  | || |||||| |||||||||||||||    
T  43308188 tttaacaagtttgactgagttaacactcggtaaactcgtgtaa 43308146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 44725571 - 44725429
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||| ||||  || |||  ||| |||| ||||||||||  ||||||||||||||||  ||||||| ||| |||||||||||||  |||||    
T  44725571 aaatcgagtgttaaatctcagagattatcgagattacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaagg 44725472  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||||| |||||||||||||||    
T  44725471 tttaacgagtttgactgagttaacactcggtaaactcgtgtaa 44725429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 24067107 - 24067188
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagtt 296  Q
    ||||||||||||||||||| ||||||||||| |||||| |||| ||||| ||||||||||||||| | | ||||||||||||    
T  24067107 gagtttacgtttttaggtaccaaaatcgtgtcaactcggaggtgaactcaatttctggtaaaatcggcatgtttgacgagtt 24067188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 186 - 351
Target Start/End: Complemental strand, 6388254 - 6388085
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||| ||||| |||||| || ||||||  || |||| ||||||||||| |||||||||||||||||| ||||||||||  ||| |||||||||| ||| |    
T  6388254 aaattgagtggtaactcgccgagtttatcgaatttatgtttttaggtaccaaaatcgtgttaactcggaggtaaactctgtttatggtaaaatcggaaag 6388155  T
Q  286 tttgacgagttggatcgggt----gaacacttggtaaactcgtgtaaactcaatcgagttttacgagttt 351  Q
    |||||| |||| || |  ||    | ||||| | ||||||||||||||||  | ||||||||||||||||    
T  6388154 tttgacaagtttgaccaagttaacgtacactcgataaactcgtgtaaacttgaccgagttttacgagttt 6388085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 422 - 488
Target Start/End: Complemental strand, 12737867 - 12737801
Alignment:
Q  422 ctagttagggttgcgatttcgacggtggaaattcagttttcgacaccgatgattacgacgtcggtta 488  Q
    |||||||||||||||||| |||||||| |||||||| ||||||  ||||||||| |||||| |||||    
T  12737867 ctagttagggttgcgattccgacggtgaaaattcagatttcgatgccgatgattgcgacgttggtta 12737801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 259 - 328
Target Start/End: Complemental strand, 12522489 - 12522420
Alignment:
Q  259 aactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    |||||| |||||||||||||   ||||||||||||||| || || || ||||||||||||||||||||||    
T  12522489 aactcggtttctggtaaaattgaaaggtttgacgagtttgaccgagttaacacttggtaaactcgtgtaa 12522420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 41252165 - 41252246
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagtt 296  Q
    |||||||| |||||||||  ||||| |||||||||||| | ||||||||||||| || | ||||| ||| ||||||||||||    
T  41252165 gagtttacttttttaggtggcaaaaacgtgttaactcggaagtaaactcgatttttgatgaaatcggaaagtttgacgagtt 41252246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 331
Target Start/End: Complemental strand, 26620445 - 26620329
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    |||||||  ||||||| |||| |||||||||||||| |  |||||| ||  |||||| |||||||  || |||||||||||| ||||| || |||||| |    
T  26620445 gagtttatatttttagatatcgaaatcgtgttaacttggtggtaaattcagtttctgataaaatcgaaaagtttgacgagtttgatcgagttaacactcg 26620346  T
Q  315 gtaaactcgtgtaaact 331  Q
     ||||||| ||||||||    
T  26620345 ataaactcatgtaaact 26620329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 281 - 349
Target Start/End: Original strand, 42423257 - 42423325
Alignment:
Q  281 gaaggtttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactcaatcgagttttacgagt 349  Q
    |||||||||||||||| || || || |||||| ||||||||| ||||||||| | ||||||||||||||    
T  42423257 gaaggtttgacgagtttgaccgagttaacactgggtaaactcctgtaaactctaccgagttttacgagt 42423325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 296
Target Start/End: Complemental strand, 1528001 - 1527923
Alignment:
Q  218 tttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagtt 296  Q
    |||||||||||| ||  ||||| |||||||||||| ||||||||||||||| |||| ||||| ||| ||| ||| ||||    
T  1528001 tttacgtttttaagtggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaatgttggacaagtt 1527923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 186 - 291
Target Start/End: Original strand, 24082184 - 24082289
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||| ||||||||||||  | |||||||  |||||| | ||||||||| |||||| |||||||  |  ||||||| ||| ||||||||||||||  ||||    
T  24082184 aaattgagtgttaactcgacgagtttactaagtttatgattttaggtaccaaaattgtgttaatactgaggtaaattcggtttctggtaaaatcgaaagg 24082283  T
Q  286 tttgac 291  Q
    ||||||    
T  24082284 tttgac 24082289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 252
Target Start/End: Complemental strand, 12522520 - 12522484
Alignment:
Q  216 agtttacgtttttaggtatcaaaatcgtgttaactcg 252  Q
    |||||||||||||||||| ||||||||||||||||||    
T  12522520 agtttacgtttttaggtaccaaaatcgtgttaactcg 12522484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 475
Target Start/End: Complemental strand, 12522187 - 12522136
Alignment:
Q  424 agttagggttgcgatttcgacggtggaaattcagttttcgacaccgatgatt 475  Q
    |||||||||||||||| || |||||||||||||| || |||| |||||||||    
T  12522187 agttagggttgcgattccggcggtggaaattcagattgcgacgccgatgatt 12522136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 333
Target Start/End: Complemental strand, 33177944 - 33177830
Alignment:
Q  218 tttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggta 317  Q
    |||| ||||||||||| |||||  ||||||| | ||||||||||||||||| |||| ||||   || |||||||||||| ||  | || ||||| || ||    
T  33177944 tttatgtttttaggtaccaaaaatgtgttaatttgaaggtaaactcgatttttggtgaaattgaaatgtttgacgagtttgactgagttaacacgtgtta 33177845  T
Q  318 aactcgtgtaaactca 333  Q
    |||||| |||||||||    
T  33177844 aactcg-gtaaactca 33177830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 328
Target Start/End: Original strand, 7466766 - 7466884
Alignment:
Q  210 ttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaac 309  Q
    |||| ||||||| ||||||| |||  ||||||||||||||||  ||||||| ||  |||||| ||||||  ||||| || ||||||| ||  | || |||    
T  7466766 ttaccgagtttatgtttttaagtacaaaaatcgtgttaactctgaggtaaaatcagtttctgataaaattggaaggcttaacgagtttgactgagttaac 7466865  T
Q  310 acttggtaaactcgtgtaa 328  Q
    ||| | |||||||||||||    
T  7466866 actcgataaactcgtgtaa 7466884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 296
Target Start/End: Complemental strand, 28317168 - 28317090
Alignment:
Q  218 tttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagtt 296  Q
    |||||||||||||||  |||||  |||  |||||| ||||||||||||||| |||| |||||  || ||||||||||||    
T  28317168 tttacgtttttaggtggcaaaaaggtgaaaactcggaggtaaactcgatttttggtgaaatcgaaaagtttgacgagtt 28317090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 3e-40; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 186 - 322
Target Start/End: Complemental strand, 29510197 - 29510061
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| ||||||  |||||||||| ||||||||||||||||||||||||||  | |||||||| |||||||||||||||||||||    
T  29510197 aaatcgagtgttaactctccgagtttatcgagtttacgtgtttaggtatcaaaatcgtgttaactctgatgtaaactcaatttctggtaaaatcagaagg 29510098  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactc 322  Q
    ||||||||||| || || || |||||| |||||||||    
T  29510097 tttgacgagtttgaccgagttaacactcggtaaactc 29510061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 186 - 338
Target Start/End: Complemental strand, 49501313 - 49501161
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| |||||||||||||||||||  ||||||||||||||||  ||||||||||| |||||||||||||| |||||    
T  49501313 aaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggtaaaatcggaagg 49501214  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactcaatcga 338  Q
    ||| ||||||| ||  | || |||||| ||||||||||||||||||| |||||    
T  49501213 tttaacgagtttgacggagttaacactcggtaaactcgtgtaaactcgatcga 49501161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 186 - 338
Target Start/End: Complemental strand, 49507378 - 49507226
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| |||||||||||||||||||  ||||||||||||||||  ||||||||||| |||||||||||||| |||||    
T  49507378 aaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggtaaaatcggaagg 49507279  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactcaatcga 338  Q
    ||| ||||||| ||  | || |||||| ||||||||||||||||||| |||||    
T  49507278 tttaacgagtttgacggagttaacactcggtaaactcgtgtaaactcgatcga 49507226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 186 - 332
Target Start/End: Original strand, 29855937 - 29856083
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||||| |||| ||||| || |||| ||||||||||||||| |||  ||||||||||||||||  |||||||||||||||||||||||||  |||||    
T  29855937 aaatcgagtattaattctccgagattaccgagtttacgtttttatgtacaaaaatcgtgttaactctgaggtaaactcgatttctggtaaaattggaagg 29856036  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
    ||| ||||||| ||  | || |||||| |||||||||||||||||||    
T  29856037 tttaacgagtttgactgagttaacactcggtaaactcgtgtaaactc 29856083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 32889868 - 32889978
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| | ||||| |||||||||| |||||||| ||||||||||||||||   | |||||||| |||||||||||||||||||||    
T  32889868 aaatcgagtgttaactctccgaatttaccgagtttacgtgtttaggtaccaaaatcgtgttaactttgatgtaaactcaatttctggtaaaatcagaagg 32889967  T
Q  286 tttgacgagtt 296  Q
    |||||||||||    
T  32889968 tttgacgagtt 32889978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 186 - 332
Target Start/End: Complemental strand, 49834614 - 49834468
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||| |||||||||||||| ||| |||| |||||||||||||||| ||  ||||||||||||||||  ||||||||||| |||||||||||||| |||||    
T  49834614 aaattgagtgttaactctctaagattaccgagtttacgtttttagctacaaaaatcgtgttaactctgaggtaaactcggtttctggtaaaatcggaagg 49834515  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
    ||| ||||||| ||  | || || ||| |||||||||||||||||||    
T  49834514 tttaacgagtttgactgagttaatactcggtaaactcgtgtaaactc 49834468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 186 - 323
Target Start/End: Original strand, 41725534 - 41725671
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||||||||||||||||  | ||||  ||||||||||||||||||  ||||||||||||||||  |||||||||||||||||||||||||| |||||    
T  41725534 aaatcgagtgttaactctccgtgattacctagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcgatttctggtaaaatcggaagg 41725633  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcg 323  Q
    ||| ||||||| ||  | || |||||| ||||||||||    
T  41725634 tttaacgagtttgactgagttaacactcggtaaactcg 41725671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 215 - 332
Target Start/End: Original strand, 50517194 - 50517311
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    |||||||||| |||||||| ||||||||||||||||   |||||||||||||||||||||||||  |||||||||||||||| || || || |||||| |    
T  50517194 gagtttacgtgtttaggtaccaaaatcgtgttaactttgaggtaaactcgatttctggtaaaattggaaggtttgacgagtttgaccgagttaacactcg 50517293  T
Q  315 gtaaactcgtgtaaactc 332  Q
    ||||||||||||||||||    
T  50517294 gtaaactcgtgtaaactc 50517311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 215 - 351
Target Start/End: Complemental strand, 26491225 - 26491089
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    |||||||||| |||||||| |||||||||||||| |   ||||||||||| ||||||||||||||||||||||||||||||| || || || |||| |||    
T  26491225 gagtttacgtgtttaggtaccaaaatcgtgttaaatttgaggtaaactcggtttctggtaaaatcagaaggtttgacgagtttgaccgagttaacatttg 26491126  T
Q  315 gtaaactcgtgtaaactcaatcgagttttacgagttt 351  Q
    ||||||||||||||| || || ||||||  |||||||    
T  26491125 gtaaactcgtgtaaattcgattgagtttaccgagttt 26491089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 215 - 351
Target Start/End: Original strand, 46286710 - 46286846
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    ||||||||||||||||||| ||||||||||||||| | |||||||||||||||||| ||||| || |||||||||||||||| || || || |||||| |    
T  46286710 gagtttacgtttttaggtaccaaaatcgtgttaacactaaggtaaactcgatttctagtaaactcggaaggtttgacgagtttgaccgagttaacactcg 46286809  T
Q  315 gtaaactcgtgtaaactcaatcgagttttacgagttt 351  Q
     ||||||| ||||||||| ||| |||||  |||||||    
T  46286810 ataaactcttgtaaactcgatcaagtttaccgagttt 46286846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 871782 - 871891
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||  | ||||||| ||||||||||||||||||| |||| |||||| |||||| |||||||||||||||||||||||||| ||| |    
T  871782 aaatcgagtgttaactcgtcgagtttaccgagtttacgtttttaggtaccaaa-tcgtgtcaactcggaggtaaactcgatttctggtaaaatcggaatg 871880  T
Q  286 tttgacgagtt 296  Q
    |||||||||||    
T  871881 tttgacgagtt 871891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 186 - 332
Target Start/End: Original strand, 5800385 - 5800531
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||  |||||||| ||||||||||  ||||||||||||||||  ||||||| ||| |||||||||| |||||||||    
T  5800385 aaatcgagtgttaactctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaattcggtttctggtaacatcagaagg 5800484  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
    ||| ||||||| ||  | || |||||| | |||||||||||||||||    
T  5800485 tttaacgagtttgactgagttaacactcgataaactcgtgtaaactc 5800531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 189 - 334
Target Start/End: Original strand, 32322490 - 32322636
Alignment:
Q  189 tcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggttt 288  Q
    ||||||||||||||||| || |||| |||||||||||||||||||  ||||||||||||| ||  ||||||||||| |||||||||||||| ||||| ||    
T  32322490 tcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaattctgaggtaaactcggtttctggtaaaatcggaaggctt 32322589  T
Q  289 gacgagttgga-tcgggtgaacacttggtaaactcgtgtaaactcaa 334  Q
     ||||||| || |  | | |||||| |||||||||||||||||||||    
T  32322590 aacgagtttgactgagtttaacactcggtaaactcgtgtaaactcaa 32322636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 215 - 351
Target Start/End: Complemental strand, 24966621 - 24966485
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    |||||||||| |||||||| |||||||||||||||||| | ||||| ||| ||| |||||||||  ||||||||| |||||| || |  || ||||||||    
T  24966621 gagtttacgtgtttaggtaccaaaatcgtgttaactcggaagtaaattcggtttttggtaaaatgggaaggtttgccgagtttgaccaagttaacacttg 24966522  T
Q  315 gtaaactcgtgtaaactcaatcgagttttacgagttt 351  Q
    |||||||||||||||||| | |||||||  |||||||    
T  24966521 gtaaactcgtgtaaactcgaccgagtttaccgagttt 24966485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 215 - 291
Target Start/End: Original strand, 33138801 - 33138877
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgac 291  Q
    |||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  33138801 gagtttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtaaaatcggaaggtttgac 33138877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 186 - 332
Target Start/End: Original strand, 28484316 - 28484463
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaa-tcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaag 284  Q
    |||| ||||||||||||||  || |||| |||||||||||||||||||  |||| ||||||||||||  ||||||||||| |||||||||||||  ||||    
T  28484316 aaattgagtgttaactctctgagattaccgagtttacgtttttaggtacaaaaagtcgtgttaactctgaggtaaactcggtttctggtaaaattggaag 28484415  T
Q  285 gtttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
    |||| ||||||| ||  | || |||||| | |||||||||||||||||    
T  28484416 gtttaacgagtttgactgagttaacactcgataaactcgtgtaaactc 28484463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 207 - 326
Target Start/End: Original strand, 29469156 - 29469275
Alignment:
Q  207 agtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtg 306  Q
    ||||||| |||||||||| |||||||   |||| |||||||||||| |||||||||||||||||||||||||| ||| |||||||||||| || || ||     
T  29469156 agtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgagtt 29469255  T
Q  307 aacacttggtaaactcgtgt 326  Q
    ||||||  ||||||||||||    
T  29469256 aacactcagtaaactcgtgt 29469275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 23987618 - 23987759
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||||||||| |||||| || |||| |||||||||||||||||||  ||||||||||||||||  ||||||| | | |||||||||||||  |||||    
T  23987618 aaatcgagtgttacctctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaa-ttggtttctggtaaaattggaagg 23987716  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||||| |||||||||||||||    
T  23987717 tttaacgagtttgactgagttaacactaggtaaactcgtgtaa 23987759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 30967123 - 30966981
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| |||||||||||||||||||  ||||||||||||||||  || |||| | | |||||||||||||  |||||    
T  30967123 aaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgagataaaattggtttctggtaaaattggaagg 30967024  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||    || |||||| |||||||||||||||    
T  30967023 tttaacgagtttgactaagttaacactcggtaaactcgtgtaa 30966981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 186 - 324
Target Start/End: Complemental strand, 54853256 - 54853118
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| |||||||| |||||| |||  ||||| ||||||||||  ||||||| ||| ||||| ||||||| ||||||    
T  54853256 aaatcgagtgttaactctccgagattaccgagtttacctttttatgtacaaaaattgtgttaactctgaggtaaaatcggtttctcgtaaaattagaagg 54853157  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgt 324  Q
    ||| ||||||| ||| | || |||||| |||||||||||    
T  54853156 tttaacgagtttgattgagttaacactcggtaaactcgt 54853118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 55165497 - 55165607
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||| ||||||  | ||||||| ||||||||||||||| ||| ||||||||| |||||| | ||||||||| ||||| |||||||||||||| |    
T  55165497 aaatcgagtgctaactcgtcgagtttactgagtttacgtttttacgtaccaaaatcgtattaacttggaggtaaacttgatttatggtaaaatcagaatg 55165596  T
Q  286 tttgacgagtt 296  Q
    |||||||||||    
T  55165597 tttgacgagtt 55165607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 215 - 323
Target Start/End: Complemental strand, 6487420 - 6487312
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    ||||||||||||||||||  ||||| |||||||||||| ||||||||||||||| |||| ||||| ||| |||||||||||| || || |||||||| ||    
T  6487420 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtg 6487321  T
Q  315 gtaaactcg 323  Q
     ||||||||    
T  6487320 ttaaactcg 6487312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 207 - 326
Target Start/End: Original strand, 8084202 - 8084321
Alignment:
Q  207 agtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtg 306  Q
    ||||||| |||||||||| |||||||   |||| |||||||||||| ||||||||||||||||| |||||||| ||| |||||||||||| || || ||     
T  8084202 agtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagtt 8084301  T
Q  307 aacacttggtaaactcgtgt 326  Q
    ||||||  ||||||||||||    
T  8084302 aacactcagtaaactcgtgt 8084321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 186 - 329
Target Start/End: Complemental strand, 23671505 - 23671362
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||||||||| | |||  ||||||| |  ||||||| |||||||| |||||||||||||||||| |||||||||||||||||||| |||||  || |    
T  23671505 aaatcgagtgttagcactctgagtttaccggttttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcgaaaag 23671406  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaa 329  Q
    ||||||||||| || |  || || |||  |||||||||||||||    
T  23671405 tttgacgagtttgagcaagttaagactcagtaaactcgtgtaaa 23671362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 5441823 - 5441965
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||| |||||| ||||| || |||  |||||||| ||||||||||  ||||||||||||||||  ||||||| ||| |||||||||||||  |||||    
T  5441823 aaatcgaatgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaagg 5441922  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||||| |||||||||||||||    
T  5441923 tttaacgagtttgactgagttaacactcggtaaactcgtgtaa 5441965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 27768485 - 27768627
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||| ||||| || |||  |||||||| ||||||||||  ||||||||||||||||  ||||||| ||| |||||||||||||  |||||    
T  27768485 aaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaagg 27768584  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||| | |||||||||||||||    
T  27768585 tttaacgagtttgactgagttaacattcggtaaactcgtgtaa 27768627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 48261499 - 48261641
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||| ||||| || |||  ||||| || ||||||||||  ||||||||||||||||  ||||||| ||| |||||||||||||  |||||    
T  48261499 aaatcgagtgttaaatctccgagattatcgagttgacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaagg 48261598  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||||| |||||||||||||||    
T  48261599 tttaacgagtttgactgagttaacactcggtaaactcgtgtaa 48261641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 50018613 - 50018755
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| |||||||| ||||||||||  |||||| |||||||||  ||||||| ||| |||||||||||||  |||||    
T  50018613 aaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcatgttaactctgaggtaaaatcggtttctggtaaaattggaagg 50018712  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| | ||| | ||  | || |||||| |||||||||||||||    
T  50018713 tttaaagagattgacagagttaacactcggtaaactcgtgtaa 50018755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 37828210 - 37828068
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||| |||||| ||||| || |||  |||||||| ||||||| ||  ||||||||||||||||  ||||||| ||| |||||||||||||  |||||    
T  37828210 aaatcgaatgttaaatctccgagattatcgagtttacatttttagatacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaagg 37828111  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||||| |||||||||||||||    
T  37828110 tttaacgagtttgactgagttaacactcggtaaactcgtgtaa 37828068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 51321277 - 51321419
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| |  |||  |||||||| ||||||||||  ||||||||||||||||  | ||||| ||| |||||||||||||  |||||    
T  51321277 aaatcgagtgttaactctccgatattatcgagtttacatttttaggtacaaaaatcgtgttaactctgacgtaaaatcggtttctggtaaaattggaagg 51321376  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| || |||| ||  | || |||||| |||||||||||||||    
T  51321377 tttaaccagtttgactgagttaacactcggtaaactcgtgtaa 51321419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 215 - 326
Target Start/End: Complemental strand, 42937513 - 42937402
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    |||||||||| |||||||   |||| ||| |||||||| ||||||||||||||||||||||||||  || |||||||||||| || || || ||||||      
T  42937513 gagtttacgtatttaggtgctaaaagcgttttaactcggaggtaaactcgatttctggtaaaatcgaaaagtttgacgagtttgaccgagttaacactcc 42937414  T
Q  315 gtaaactcgtgt 326  Q
    ||||||||||||    
T  42937413 gtaaactcgtgt 42937402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 215 - 332
Target Start/End: Complemental strand, 8563460 - 8563343
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    |||||||||||||||| |  ||||| |||||||||||| || |||||||| ||| || | ||||| ||| |||||||||||| || || || ||||| ||    
T  8563460 gagtttacgtttttagatgacaaaaacgtgttaactcggagataaactcggtttttgatgaaatcggaaagtttgacgagtttgaccgagttaacacgtg 8563361  T
Q  315 gtaaactcgtgtaaactc 332  Q
     |||||||||||||||||    
T  8563360 ttaaactcgtgtaaactc 8563343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 21486516 - 21486597
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagtt 296  Q
    ||||||||||||||||||  ||||| ||||| |||||||||||||||||| ||| |||  ||||||||| ||||||||||||    
T  21486516 gagtttacgtttttaggtggcaaaaccgtgtaaactcgaaggtaaactcggtttttggagaaatcagaaagtttgacgagtt 21486597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 32683807 - 32683666
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||  || |||| ||||| |||||||||||||  ||||||||||||| |   ||||||  ||| |||||| ||||||  |||||    
T  32683807 aaatcgagtgttaactctcagagattaccgagtt-acgtttttaggtacaaaaatcgtgttaattatgaggtaagatcggtttctgttaaaattggaagg 32683709  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||||| |||||||||||||||    
T  32683708 tttaacgagtttgaatgagttaacactcggtaaactcgtgtaa 32683666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 54341563 - 54341673
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||| ||||| || |||  |||||||| ||||||||||  |||||||||| |||||  ||||||| ||| |||||||||||||   ||||    
T  54341563 aaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgtaaactctgaggtaaaatcggtttctggtaaaattgaaagg 54341662  T
Q  286 tttgacgagtt 296  Q
    ||| |||||||    
T  54341663 tttaacgagtt 54341673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 51967278 - 51967359
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagtt 296  Q
    ||||||||||||||||||  ||||| |||||||||||| ||||||||||| ||| |||| |||||  || ||||||||||||    
T  51967278 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcgaaaagtttgacgagtt 51967359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 322
Target Start/End: Original strand, 9972774 - 9972881
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    ||||||| ||||||||||  ||||| ||||| |||||| ||||||||||| ||| |||| ||||| ||| |||||||||||| || || || ||||| ||    
T  9972774 gagtttatgtttttaggtggcaaaaacgtgtaaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagttaacacgtg 9972873  T
Q  315 gtaaactc 322  Q
     |||||||    
T  9972874 ttaaactc 9972881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 56424077 - 56423996
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagtt 296  Q
    ||||||||||||||||||  ||||| |||||||||||| ||||||||||| ||| | || ||||| ||| |||||| |||||    
T  56424077 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttagtgaaatcggaaagtttgatgagtt 56423996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 426 - 488
Target Start/End: Original strand, 33139115 - 33139177
Alignment:
Q  426 ttagggttgcgatttcgacggtggaaattcagttttcgacaccgatgattacgacgtcggtta 488  Q
    ||||||||| |||| ||||||||||||||||| ||||||| ||||||||| | ||| ||||||    
T  33139115 ttagggttgtgattccgacggtggaaattcagatttcgactccgatgattgcaacgccggtta 33139177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 273
Target Start/End: Complemental strand, 40487761 - 40487703
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggt 273  Q
    ||||||||||||||||||  ||||| |||||||||||| ||||||||||| ||| ||||    
T  40487761 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggt 40487703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 259 - 332
Target Start/End: Original strand, 37916283 - 37916356
Alignment:
Q  259 aactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
    |||||| |||||||||||||| |||||||| ||||||| ||  | || ||||||  ||||||||||||||||||    
T  37916283 aactcggtttctggtaaaatcggaaggtttaacgagtttgactgagttaacactcagtaaactcgtgtaaactc 37916356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 215 - 332
Target Start/End: Original strand, 54561220 - 54561336
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    |||||||| |||||||||  ||||| | ||| |||||| ||||||||||| ||| |||| ||||| ||| |||||||| ||| || || || ||||| ||    
T  54561220 gagtttacatttttaggtggcaaaaacatgtaaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgtgtttgaccgagttaacacgtg 54561319  T
Q  315 gtaaactcgtgtaaactc 332  Q
     |||||||| ||||||||    
T  54561320 ttaaactcg-gtaaactc 54561336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 14334395 - 14334459
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatc 279  Q
    ||||||||||||||||||| |||||||| || |||||| | ||||||| | ||| ||||||||||    
T  14334395 gagtttacgtttttaggtaccaaaatcgcgtaaactcggacgtaaacttgttttttggtaaaatc 14334459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 291
Target Start/End: Complemental strand, 41470424 - 41470352
Alignment:
Q  219 ttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgac 291  Q
    ||||||||||||||  ||||| |||||||||||| ||||||||||| ||| |||| ||||  ||| |||||||    
T  41470424 ttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaattggaaagtttgac 41470352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 291
Target Start/End: Complemental strand, 46863017 - 46862941
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgac 291  Q
    |||||||||| ||||||||  ||||| |||||||||   | ||||| ||||||||||||||||||  ||||||||||    
T  46863017 gagtttacgtgtttaggtactaaaattgtgttaactatgaagtaaattcgatttctggtaaaatcgaaaggtttgac 46862941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 465
Target Start/End: Complemental strand, 46862715 - 46862672
Alignment:
Q  422 ctagttagggttgcgatttcgacggtggaaattcagttttcgac 465  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||    
T  46862715 ctagttagggttgcgattccgacggtagaaattcagatttcgac 46862672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 333
Target Start/End: Original strand, 26448632 - 26448749
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    |||||||| |||||||||  ||||| | ||| |||||| |||||||||  |||| |||| ||||| ||| |||||||||||| || || || |||||  |    
T  26448632 gagtttacatttttaggtggcaaaaacatgtaaactcggaggtaaacttaatttttggtgaaatcggaaagtttgacgagtttgaccgagttaacacgcg 26448731  T
Q  315 gtaaactcgtgtaaactca 333  Q
     |||||||| |||||||||    
T  26448732 ttaaactcg-gtaaactca 26448749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 462
Target Start/End: Complemental strand, 35518276 - 35518238
Alignment:
Q  424 agttagggttgcgatttcgacggtggaaattcagttttc 462  Q
    ||||||||||||||||||||| |||||||||||| ||||    
T  35518276 agttagggttgcgatttcgaccgtggaaattcagatttc 35518238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 3860286 - 3860237
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcg 264  Q
    ||||||||||||||| ||  ||||| |||||||||||| |||||||||||    
T  3860286 gagtttacgtttttatgtggcaaaaacgtgttaactcggaggtaaactcg 3860237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 3869043 - 3868994
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcg 264  Q
    ||||||||||||||| ||  ||||| |||||||||||| |||||||||||    
T  3869043 gagtttacgtttttatgtggcaaaaacgtgttaactcggaggtaaactcg 3868994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 40162790 - 40162871
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagtt 296  Q
    ||||||||||||||||||  ||||| ||||| || ||| || |||||||| |||  ||| ||||| ||| ||||||||||||    
T  40162790 gagtttacgtttttaggtggcaaaaacgtgtaaattcggagataaactcggttttcggtgaaatcggaaagtttgacgagtt 40162871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 218 - 278
Target Start/End: Complemental strand, 2326760 - 2326700
Alignment:
Q  218 tttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaat 278  Q
    |||||||||||||||| ||||||||||| |||| | | ||||||| | ||||| |||||||    
T  2326760 tttacgtttttaggtaccaaaatcgtgtaaacttggatgtaaacttgttttctagtaaaat 2326700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 424 - 488
Target Start/End: Original strand, 46287029 - 46287093
Alignment:
Q  424 agttagggttgcgatttcgacggtggaaattcagttttcgacaccgatgattacgacgtcggtta 488  Q
    |||||||||||||||| | ||| ||||||||||  ||||||| ||  ||||| ||||||||||||    
T  46287029 agttagggttgcgattccaacgatggaaattcaaatttcgactcccgtgattgcgacgtcggtta 46287093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 186 - 332
Target Start/End: Complemental strand, 57845 - 57699
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| |||||||||||||||||||  ||||||||||||||||  ||||||||||| ||||| ||||||||||||||    
T  57845 aaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctagtaaaatcagaagg 57746  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
    ||| | ||||| ||| | || |||||| |||||||||||||||||||    
T  57745 tttaatgagtttgattgagttaacactcggtaaactcgtgtaaactc 57699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 4e-39; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 186 - 351
Target Start/End: Complemental strand, 31847348 - 31847182
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagttt-acgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaag 284  Q
    |||||||||||||||||||| ||||||  |||||| |||||||||||||| |||||| || ||||||| |||||||||| ||||||| ||||||||||||    
T  31847348 aaatcgagtgttaactctccgagtttatcgagttttacgtttttaggtattaaaatcatggtaactcggaggtaaactctatttctgataaaatcagaag 31847249  T
Q  285 gtttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactcaatcgagttttacgagttt 351  Q
    |||||||||||| || ||  | |||||| |||||||||||||||||   | ||||||||||||||||    
T  31847248 gtttgacgagttcgaccgaattaacactcggtaaactcgtgtaaacatgaccgagttttacgagttt 31847182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 186 - 351
Target Start/End: Complemental strand, 2308843 - 2308678
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||||||||||||| || ||||||   | |||||||||||| ||| |||||||||||||||||| ||||||| ||| ||| ||||||||||| || |    
T  2308843 aaatcgagtgttaactcgccgagtttattaaatttacgtttttatgtaccaaaatcgtgttaactcggaggtaaattcggtttgtggtaaaatcaaaaag 2308744  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactcaatcgagttttacgagttt 351  Q
    |||||| |||| || |  || |||||| |||||| |||||||||||| ||||||||||||||||||    
T  2308743 tttgacaagtttgaccaagttaacactcggtaaaatcgtgtaaactcgatcgagttttacgagttt 2308678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 28740075 - 28739933
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| ||||||| |||||||||||  ||||||||||||||||  ||||||| ||| |||||||||||||  |||||    
T  28740075 aaatcgagtgttaactctccgagattaccgagtttatgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaagg 28739976  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||||| |||||||||||||||    
T  28739975 tttaacgagtttgactgagttaacactcggtaaactcgtgtaa 28739933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 186 - 342
Target Start/End: Original strand, 40829606 - 40829764
Alignment:
Q  186 aaatcgagtgttaactctccaag--tttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaa 283  Q
    |||| ||||||||||||||| ||  ||||| |||| ||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||   ||    
T  40829606 aaattgagtgttaactctccgagagtttaccgagtctacatttttaggtatcaaaatcgtgttaactcggaggtaaactcggtttctggtaaaatagaaa 40829705  T
Q  284 ggtttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactcaatcgagttt 342  Q
    |||||||||| || || || || ||||||   ||||||| ||||||||| | |||||||    
T  40829706 ggtttgacgaatttgaccgagttaacactcaataaactcatgtaaactcgaccgagttt 40829764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 186 - 332
Target Start/End: Complemental strand, 6224358 - 6224212
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||  |||||||||||||||||||   |||||||||||||||  |||| |||||| ||||| |||||||| |||||    
T  6224358 aaatcgagtgttaactctccgagattatcgagtttacgtttttaggtacacaaatcgtgttaactcttaggtgaactcggtttctagtaaaatcggaagg 6224259  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
    ||| ||||||| ||  | || |||||| ||||||||| |||||||||    
T  6224258 tttaacgagtttgactgagttaacactcggtaaactcatgtaaactc 6224212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 186 - 332
Target Start/End: Original strand, 25288584 - 25288730
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||| | |||||||||| || |||| |||||||| ||||||||||  ||||||||||||||||  ||||||||||| ||||| |||||||| |||||    
T  25288584 aaatcgaatattaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctagtaaaatcggaagg 25288683  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
    ||| ||| ||| ||| | || |||||| | |||||||||||||||||    
T  25288684 tttaacgggtttgattgagttaacactcgataaactcgtgtaaactc 25288730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 186 - 323
Target Start/End: Original strand, 34342210 - 34342347
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||  ||||||| ||||||||||||||||||| ||||  | ||||| | | |||||||||||| ||||||||||| || |||||    
T  34342210 aaatcgagtgttaactctctgagtttaccgagtttacgtttttaggtaccaaatccatgttagcactaaggtaaactcggtttctggtaaactcggaagg 34342309  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcg 323  Q
    ||||||||||| ||| | || |||| | ||||||||||    
T  34342310 tttgacgagttagattgagttaacagtcggtaaactcg 34342347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 186 - 286
Target Start/End: Complemental strand, 215038 - 214938
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||| ||||||||||| ||| || |||| || |||||||||||||||| ||||||||||||||||| |||||||||||  ||||||||||||||||||||    
T  215038 aaattgagtgttaactttccgagattaccgaatttacgtttttaggtaccaaaatcgtgttaactctaaggtaaactcagtttctggtaaaatcagaagg 214939  T
Q  286 t 286  Q
    |    
T  214938 t 214938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 10657851 - 10657961
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||  || |||| |||||||||||||||||||  ||||||||||||||||  ||||||| ||||||| |||||||||  |||||    
T  10657851 aaatcgagtgttaactctctgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcgatttttggtaaaattggaagg 10657950  T
Q  286 tttgacgagtt 296  Q
    ||| |||||||    
T  10657951 tttaacgagtt 10657961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 194 - 332
Target Start/End: Complemental strand, 13833192 - 13833054
Alignment:
Q  194 tgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacga 293  Q
    |||||||||| | || |||  |||||||||||||||||||  ||||||||||||||||  |||||||||| |||||| ||||||||||||| ||| || |    
T  13833192 tgttaactcttcgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcaatttctagtaaaatcagaagatttaacaa 13833093  T
Q  294 gttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
    ||| ||  | || |||||| |||||||||||||||||||    
T  13833092 gtttgactgagttaacactcggtaaactcgtgtaaactc 13833054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 15224202 - 15224312
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||||||||||| |||| |||||||  | ||||||| |||||||| |||||||||||||||||  |||||||||||||||||||| |||||  || |    
T  15224202 aaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcagaggtaaactcgatttctggtgaaatcgaaaag 15224301  T
Q  286 tttgacgagtt 296  Q
    |||||||||||    
T  15224302 tttgacgagtt 15224312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 28845006 - 28845148
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||  ||||||| |||||||||||  ||||||||||||||||  ||||||| ||| |||||| ||||||  |||||    
T  28845006 aaatcgagtgttaactctccgagattatcgagtttatgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctgataaaattggaagg 28845105  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||||| |||||||||||||||    
T  28845106 tttaacgagtttgactgagttaacactcggtaaactcgtgtaa 28845148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 230 - 351
Target Start/End: Complemental strand, 18727732 - 18727611
Alignment:
Q  230 ggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggtaaactcgtgtaaa 329  Q
    |||| ||||| |||||||||||| |||||||||||| |||||||||||||| || ||||||||||||  | || || |||| | | ||||||||||||||    
T  18727732 ggtaccaaaaccgtgttaactcggaggtaaactcgaattctggtaaaatcaaaaagtttgacgagtttcaccgagttaacattcgataaactcgtgtaaa 18727633  T
Q  330 ctcaatcgagttttacgagttt 351  Q
    ||| | ||||||||||||||||    
T  18727632 ctcgaccgagttttacgagttt 18727611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 227 - 332
Target Start/End: Complemental strand, 38295806 - 38295701
Alignment:
Q  227 ttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggtaaactcgtgt 326  Q
    |||||||||||||| ||||||| ||| ||| ||| | | ||||||||||||||||||||||||||||||| || || || |||||| |||||||||||||    
T  38295806 ttaggtatcaaaattgtgttaattcggaggaaaatttggtttctggtaaaatcagaaggtttgacgagtttgaccgagttaacactcggtaaactcgtgt 38295707  T
Q  327 aaactc 332  Q
    ||||||    
T  38295706 aaactc 38295701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 186 - 326
Target Start/End: Complemental strand, 18900057 - 18899917
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||| |||| |||||  | ||||||| |||||||||| |||||||   |||| |||||||||||| ||||||||||||||||| |||||||| ||| |    
T  18900057 aaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaag 18899958  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgt 326  Q
    ||||||||||| || || || ||||||  ||||||||||||    
T  18899957 tttgacgagtttgaccgagttaacactcagtaaactcgtgt 18899917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 296
Target Start/End: Complemental strand, 3858551 - 3858441
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||| |||||||||||| || |||| || || |||||||||||| || ||||||| |||| |||| ||||||||||||||||| |||||||||| ||| |    
T  3858551 aaattgagtgttaactcgccgagttaaccgaatttacgtttttaagtgtcaaaattgtgtcaacttgaaggtaaactcgatttttggtaaaatcggaatg 3858452  T
Q  286 tttgacgagtt 296  Q
    |||||||||||    
T  3858451 tttgacgagtt 3858441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 7027324 - 7027466
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||| ||||| || |||  |||||||| ||||||||||  ||||||||||||||||  ||||||| ||| |||||||||||||   ||||    
T  7027324 aaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattgaaagg 7027423  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||||| |||||||||||||||    
T  7027424 tttaacgagtttgactgagttaacactcggtaaactcgtgtaa 7027466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 26789206 - 26789348
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||| ||||| || |||  ||||| || ||||||||||  ||||||||||||||||  ||||||| ||| |||||||||||||  |||||    
T  26789206 aaatcgagtgttaaatctccgagattatcgagttgacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaagg 26789305  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||||||| |||||||||||||    
T  26789306 tttaacgagtttgactgagttaacacttgataaactcgtgtaa 26789348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 186 - 332
Target Start/End: Original strand, 33136039 - 33136183
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||  ||   || ||||||| |||||||||||  ||||||||||||||||  ||||||||||||||||||||| |||| |||||    
T  33136039 aaatcgagtgttaactctctgaga--accgagtttatgtttttaggtacaaaaatcgtgttaactctgaggtaaactcgatttctggtataatcggaagg 33136136  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
    ||| |||| || ||    || |||||| |||||||| ||||||||||    
T  33136137 tttaacgaatttgactaagttaacactcggtaaacttgtgtaaactc 33136183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 3575262 - 3575404
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||| | |||||| ||| || |||| |||||||||||||||||||  |||||| |||||||||  ||||||| ||| |||||||||||||  |||||    
T  3575262 aaatcgaatattaactatccgagattactgagtttacgtttttaggtacaaaaatcatgttaactctgaggtaaaatcggtttctggtaaaattggaagg 3575361  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||||| |||||||||| ||||    
T  3575362 tttaacgagtttgactgagttaacactcggtaaactcgcgtaa 3575404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 18177692 - 18177834
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||| ||| | || |||  |||||||| ||||||||||  ||||||||||||||||  ||||||| ||| |||||||||||||  ||| |    
T  18177692 aaatcgagtgttaaatcttcgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaag 18177791  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||||| |||||||||||||||    
T  18177792 tttaacgagtttgacagagttaacactcggtaaactcgtgtaa 18177834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 215 - 332
Target Start/End: Original strand, 13898477 - 13898593
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    |||||||||||||||||   ||||| |||||||||||| ||||||||||||||| |||| ||||| ||| |||||||||||| || || || ||||| ||    
T  13898477 gagtttacgtttttaggcggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgagttaacacgtg 13898576  T
Q  315 gtaaactcgtgtaaactc 332  Q
     |||||||| ||||||||    
T  13898577 ttaaactcg-gtaaactc 13898593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 215 - 332
Target Start/End: Original strand, 14039094 - 14039210
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    |||||||||||||||||   ||||| |||||||||||| ||||||||||||||| |||| ||||| ||| |||||||||||| || || || ||||| ||    
T  14039094 gagtttacgtttttaggcggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgagttaacacgtg 14039193  T
Q  315 gtaaactcgtgtaaactc 332  Q
     |||||||| ||||||||    
T  14039194 ttaaactcg-gtaaactc 14039210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 15926379 - 15926460
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagtt 296  Q
    |||||||||||||| |||| ||||||||||| |||||| |||| |||||||||||||||||||||  || ||||||||||||    
T  15926379 gagtttacgttttttggtaccaaaatcgtgtcaactcggaggttaactcgatttctggtaaaatcgcaatgtttgacgagtt 15926460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 215 - 323
Target Start/End: Original strand, 33262854 - 33262962
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    ||||||||||||||||||  ||||| ||||| |||||||||||||||||| ||| |||| ||||| ||| |||||||||||| ||  | || ||||| ||    
T  33262854 gagtttacgtttttaggtggcaaaaacgtgtaaactcgaaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgactgagttaacacgtg 33262953  T
Q  315 gtaaactcg 323  Q
    |||||||||    
T  33262954 gtaaactcg 33262962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 332
Target Start/End: Original strand, 24025852 - 24025966
Alignment:
Q  218 tttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggta 317  Q
    |||| |||||||||| |||||| |||||||||| | || |||||||| ||| |||||||||||||| ||||||||| |||||  | || ||||| || ||    
T  24025852 tttaagtttttaggtgtcaaaaacgtgttaacttggagataaactcggtttttggtaaaatcagaatgtttgacgaattggactgagttaacacgtgtta 24025951  T
Q  318 aactcgtgtaaactc 332  Q
    ||||||||| |||||    
T  24025952 aactcgtgtgaactc 24025966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 186 - 322
Target Start/End: Original strand, 379351 - 379487
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||||||||||||||   || |||| || ||||||||||||||||  ||||||||||||||||  ||||||| ||| ||| || ||||||| |||||    
T  379351 aaatcgagtgttaactctttgagattaccgaatttacgtttttaggtacaaaaatcgtgttaactctgaggtaaattcggtttttgataaaatcggaagg 379450  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactc 322  Q
     || ||||||| ||  | || |||||| |||||||||    
T  379451 cttaacgagtttgactgagttaacactcggtaaactc 379487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 215 - 323
Target Start/End: Original strand, 3991774 - 3991882
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    ||||||||||||||||||  ||||| |||||||||||| ||||||||||| ||| |||| |||||  || |||||||||||| || || || ||||| ||    
T  3991774 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcgaaaagtttgacgagtttgaccgagttaacacgtg 3991873  T
Q  315 gtaaactcg 323  Q
     ||||||||    
T  3991874 ttaaactcg 3991882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 215 - 323
Target Start/End: Complemental strand, 35404419 - 35404311
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    ||||||||||||||||||| | ||||||||||||||   ||||||||||| ||| |||||||||  ||| |||||||||||| || || || |||||| |    
T  35404419 gagtttacgtttttaggtaccgaaatcgtgttaacttagaggtaaactcggtttttggtaaaattggaaagtttgacgagtttgaccgagttaacactcg 35404320  T
Q  315 gtaaactcg 323  Q
     ||||||||    
T  35404319 ataaactcg 35404311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 215 - 323
Target Start/End: Complemental strand, 38413554 - 38413446
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    ||||||||||||||||||  ||||| ||||| |||||| ||||||||||| ||| |||| ||||| ||| |||||||||||| || || || ||||| ||    
T  38413554 gagtttacgtttttaggtggcaaaaacgtgtaaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagttaacacgtg 38413455  T
Q  315 gtaaactcg 323  Q
     ||||||||    
T  38413454 ttaaactcg 38413446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 242 - 332
Target Start/End: Original strand, 43078967 - 43079057
Alignment:
Q  242 gtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
    ||||||||||  ||||||||||| |||||| ||||||| |||||||| ||||||| ||| | || |||||| | |||||||||||||||||    
T  43078967 gtgttaactctgaggtaaactcggtttctgttaaaatccgaaggtttaacgagtttgattgagttaacactcgataaactcgtgtaaactc 43079057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 215 - 288
Target Start/End: Complemental strand, 1833806 - 1833733
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggttt 288  Q
    ||||||||||||||||||| ||||||||||| || | | ||||||| ||||||||||||||||| |||| ||||    
T  1833806 gagtttacgtttttaggtaacaaaatcgtgtcaatttggaggtaaattcgatttctggtaaaataagaatgttt 1833733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 343
Target Start/End: Complemental strand, 11153447 - 11153322
Alignment:
Q  218 tttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggta 317  Q
    |||||||||||||||    |||||||||||||||| ||||||||||| ||||||||||||||   | ||||| |||||| || || || ||||| || ||    
T  11153447 tttacgtttttaggtgctgaaatcgtgttaactcggaggtaaactcggtttctggtaaaatcgagatgtttggcgagtttgaccgagttaacacgtgtta 11153348  T
Q  318 aactcgtgtaaactcaatcgagtttt 343  Q
    |||||| | |||||||| | ||||||    
T  11153347 aactcgagaaaactcaaccaagtttt 11153322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 215 - 332
Target Start/End: Original strand, 19948539 - 19948655
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    |||||||| |||||||||  ||||| |||||||||||| ||||||||||  ||| |||| ||||| ||| |||||||||||| || || || ||||| ||    
T  19948539 gagtttacatttttaggtggcaaaaacgtgttaactcggaggtaaactcagtttttggtgaaatcggaaagtttgacgagtttgaccgagttaacacgtg 19948638  T
Q  315 gtaaactcgtgtaaactc 332  Q
     |||||||| ||||||||    
T  19948639 ttaaactcg-gtaaactc 19948655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 32242306 - 32242225
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagtt 296  Q
    |||||||| |||| || || |||||||||||||||||  ||||||||| ||||||| |||||||||||| |||| |||||||    
T  32242306 gagtttacattttgagataccaaaatcgtgttaactctgaggtaaacttgatttcttgtaaaatcagaatgtttaacgagtt 32242225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 32293914 - 32293994
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagtt 296  Q
    |||||||||||||| |||| |||||||||||||| ||  | ||||||| ||||||| |||||||| ||| ||||||||||||    
T  32293914 gagtttacgttttt-ggtaccaaaatcgtgttaaatctgatgtaaactggatttcttgtaaaatcggaatgtttgacgagtt 32293994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 291
Target Start/End: Original strand, 12877687 - 12877763
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgac 291  Q
    ||||||||||||||||||  ||||| |||||||||||| ||||||||||| ||| || | ||||| ||| |||||||    
T  12877687 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttgatgaaatcggaaagtttgac 12877763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 293
Target Start/End: Complemental strand, 43305101 - 43304994
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttt-taggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaag 284  Q
    |||||||||||||| ||  | ||||||| |||||| |||||| ||||||||||| | ||||||||||| |||||||||||||| || || ||||  |||     
T  43305101 aaatcgagtgttaattcgtcgagtttaccgagttttcgttttataggtatcaaactagtgttaactcg-aggtaaactcgattactagtgaaataggaaa 43305003  T
Q  285 gtttgacga 293  Q
    |||||||||    
T  43305002 gtttgacga 43304994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 328
Target Start/End: Original strand, 43825317 - 43825403
Alignment:
Q  242 gtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||||||||||  ||||||| ||| |||||||||||||  |||||||| ||||||| ||  | || |||||| |||||||||||||||    
T  43825317 gtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 43825403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 424 - 481
Target Start/End: Original strand, 40829952 - 40830009
Alignment:
Q  424 agttagggttgcgatttcgacggtggaaattcagttttcgacaccgatgattacgacg 481  Q
    ||||||||||||||||| |||||||||||||||| |||| || | ||||||| |||||    
T  40829952 agttagggttgcgattttgacggtggaaattcagatttccacgctgatgattgcgacg 40830009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 322
Target Start/End: Original strand, 41978841 - 41978945
Alignment:
Q  218 tttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggta 317  Q
    |||||||||||||||  ||||| | |||||| ||| ||||||||||| ||| || | ||||| ||| |||||||||||| || || || ||||| || ||    
T  41978841 tttacgtttttaggtggcaaaaacatgttaattcggaggtaaactcggtttttgatgaaatcggaaagtttgacgagtttgaccgagttaacacgtgtta 41978940  T
Q  318 aactc 322  Q
    |||||    
T  41978941 aactc 41978945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 280
Target Start/End: Original strand, 30850271 - 30850334
Alignment:
Q  217 gtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatca 280  Q
    ||||||||||||||||  ||||||||| | |||||| ||||||| ||| ||| |||||||||||    
T  30850271 gtttacgtttttaggtgccaaaatcgtataaactcggaggtaaattcgttttttggtaaaatca 30850334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 37810979 - 37810902
Alignment:
Q  219 ttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagtt 296  Q
    |||||||||||| |  ||||| |||||||| ||| ||||||||| ||||| |||| |||||| || |||||| |||||    
T  37810979 ttacgtttttagatgccaaaaacgtgttaaatcggaggtaaacttgatttttggtgaaatcataatgtttgatgagtt 37810902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 424 - 488
Target Start/End: Original strand, 34342562 - 34342626
Alignment:
Q  424 agttagggttgcgatttcgacggtggaaattcagttttcgacaccgatgattacgacgtcggtta 488  Q
    |||||||||||||||| | ||||||||||||||  ||||||| | | | ||| ||||||||||||    
T  34342562 agttagggttgcgattccaacggtggaaattcatatttcgacgctggtaattgcgacgtcggtta 34342626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 322
Target Start/End: Complemental strand, 45161206 - 45161126
Alignment:
Q  242 gtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggtaaactc 322  Q
    |||| |||||| ||||||||||| ||| |||| ||||| ||| |||||||||||| || || || ||||| || |||||||    
T  45161206 gtgtaaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagttcgaccgagttaacacgtgttaaactc 45161126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1128 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 186 - 331
Target Start/End: Complemental strand, 1033 - 888
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||||||||||| |||  ||||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||| |||||||||||||| ||| |    
T  1033 aaatcgagtgttaacactctgagtttaccgagtttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcggtttctggtaaaatcggaaag 934  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaact 331  Q
    ||||| ||||| || || || ||||||| |||||||||||||||||    
T  933 tttgatgagtttgaccgagttaacacttagtaaactcgtgtaaact 888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 1e-36; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 191 - 357
Target Start/End: Original strand, 21486119 - 21486285
Alignment:
Q  191 gagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttga 290  Q
    |||||||||||||   ||||||  ||||||||  |||||| ||||||||||||||||||| |||||||||||||| || ||||||||| |||||||||||    
T  21486119 gagtgttaactctttgagtttatcgagtttacacttttagatatcaaaatcgtgttaacttgaaggtaaactcgaattttggtaaaattagaaggtttga 21486218  T
Q  291 cgagttggatcgggtgaacacttggtaaactcgtgtaaactcaatcgagttttacgagtttccatct 357  Q
     ||||| ||||| || |||||| ||||||||||||||||||| | |||  ||||||||||| |||||    
T  21486219 tgagtttgatcgagttaacactcggtaaactcgtgtaaactcgaccgaaatttacgagtttacatct 21486285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 186 - 332
Target Start/End: Original strand, 37328326 - 37328472
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||| ||||||| || |||  |||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  37328326 aaatcgagtgttgactctccgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctaaggtaaactcgatttctggtaaaatcggaagg 37328425  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
    ||| ||| ||| ||  | || |||||| |||||||||||||||||||    
T  37328426 tttaacgtgtttgactgagttaacactcggtaaactcgtgtaaactc 37328472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 186 - 332
Target Start/End: Original strand, 8675750 - 8675897
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggt-aaaatcagaag 284  Q
    |||||||||||||||||||| || |||| ||||| ||||||||||||| ||||||||||||||||| |||||||||||| |||||||| ||||||  |||    
T  8675750 aaatcgagtgttaactctccgagattaccgagttaacgtttttaggtaccaaaatcgtgttaactctaaggtaaactcggtttctggtaaaaatcgaaag 8675849  T
Q  285 gtttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
    |||||||||||| ||  | || |||||| | |||||||||||||||||    
T  8675850 gtttgacgagtttgactgagttaacactcgataaactcgtgtaaactc 8675897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 186 - 351
Target Start/End: Original strand, 42610589 - 42610754
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||| ||||||||||||||  ||||||| || ||||||| |||||||| |||||||||||||| |   ||||||||| | ||||||||||||||||||||    
T  42610589 aaattgagtgttaactctctgagtttaccgaatttacgtgtttaggtaccaaaatcgtgttaaatttgaggtaaacttggtttctggtaaaatcagaagg 42610688  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactcaatcgagttttacgagttt 351  Q
    ||||||||||| || || || |||||| |||||||||||||||| || || ||||||  |||||||    
T  42610689 tttgacgagtttgaccgagttaacactgggtaaactcgtgtaaattcgattgagtttaccgagttt 42610754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 12740789 - 12740899
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| ||||||||||||||||||| |||||||||||||||||  ||||||||||| | |||||||||||  |||||    
T  12740789 aaatcgagtgttaactctccgagattaccgagtttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcggtgtctggtaaaattggaagg 12740888  T
Q  286 tttgacgagtt 296  Q
    |||||||||||    
T  12740889 tttgacgagtt 12740899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 186 - 279
Target Start/End: Original strand, 43172126 - 43172219
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatc 279  Q
    |||||||||||||||||||  ||||||| |||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  43172126 aaatcgagtgttaactctctgagtttaccgagtttacatttttaggtatcaaaatcatgttaactcggaggtaaactcgatttctggtaaaatc 43172219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 186 - 321
Target Start/End: Complemental strand, 44256541 - 44256406
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||  |||||||||||||||| ||  ||||||||||||||||  |||||||||||||||||||||||||| |||||    
T  44256541 aaatcgagtgttaactctccgagattatcgagtttacgtttttagatacaaaaatcgtgttaactctgaggtaaactcgatttctggtaaaatcggaagg 44256442  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaact 321  Q
    ||| ||||||| ||  | || |||||| ||||||||    
T  44256441 tttaacgagtttgactgagttaacactcggtaaact 44256406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 27148817 - 27148927
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||||||||||||| | |||||||  |||||||||||||||||||||||||||||||||| ||| |||||| ||| ||||| | ||||||||||| |    
T  27148817 aaatcgagtgttaactcgcaaagtttatcgagtttacgtttttaggtatcaaaatcgtgttaaatcggaggtaacctcaatttcagctaaaatcagaatg 27148916  T
Q  286 tttgacgagtt 296  Q
    |||||||||||    
T  27148917 tttgacgagtt 27148927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 186 - 332
Target Start/End: Complemental strand, 37972663 - 37972517
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||| ||  || |||| ||||||||||||||||||| |||||||||||||||||  || |||||||  |||||||||||||| |||||    
T  37972663 aaatcgagtgttaactttctgagattaccgagtttacgtttttaggtaccaaaatcgtgttaactctgagataaactcagtttctggtaaaatcggaagg 37972564  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
    ||| |||| || ||  | || | ||||||||||||||||||||||||    
T  37972563 tttaacgaatttgactgagttagcacttggtaaactcgtgtaaactc 37972517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 186 - 332
Target Start/End: Complemental strand, 44121719 - 44121573
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||  || |||| || ||||||||||||||||  |||||||||||||||   ||||||| ||| |||||||||||||| |||||    
T  44121719 aaatcgagtgttaactctctgagattaccgaatttacgtttttaggtacaaaaatcgtgttaactatgaggtaaattcggtttctggtaaaatcggaagg 44121620  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
     || ||||||| ||  | || ||||||||||||||||||||||||||    
T  44121619 cttaacgagtttgactgagttaacacttggtaaactcgtgtaaactc 44121573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 191 - 338
Target Start/End: Original strand, 29585938 - 29586085
Alignment:
Q  191 gagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttga 290  Q
    ||||||||||||||  || |||| |||||||||||||||||||  ||||||||||||||||  ||||||| ||| |||| ||||||||| |||||||| |    
T  29585938 gagtgttaactctctgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaagtcggtttcgggtaaaatcggaaggtttaa 29586037  T
Q  291 cgagttggatcgggtgaacacttggtaaactcgtgtaaactcaatcga 338  Q
     ||||| ||  | || |||||| ||||||||||||||||||| |||||    
T  29586038 tgagtttgactgagttaacactcggtaaactcgtgtaaactcgatcga 29586085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 186 - 332
Target Start/End: Original strand, 29893391 - 29893537
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| |||||||| |||||| |||  ||||||||||||||||  ||||||||||  |||||||| |||||  ||||    
T  29893391 aaatcgagtgttaactctccgagattaccgagtttacatttttaagtacaaaaatcgtgttaactctgaggtaaactcagtttctggtgaaatcgaaagg 29893490  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
    ||| ||||||| ||  | || |||||| |||||||||||||||||||    
T  29893491 tttaacgagtttgactgagttaacactcggtaaactcgtgtaaactc 29893537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 186 - 332
Target Start/End: Original strand, 41827747 - 41827893
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||| ||||||||||||||  || |||  |||||||||||||||||||  ||||||||||||||||  ||||||||||  |||||||||||||||||||     
T  41827747 aaattgagtgttaactctctgagattattgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcagtttctggtaaaatcagaaga 41827846  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
    ||| || |||| ||  | || |||||| |||||||||||||||||||    
T  41827847 tttaacaagtttgactgagttaacactcggtaaactcgtgtaaactc 41827893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 210 - 332
Target Start/End: Complemental strand, 48136990 - 48136868
Alignment:
Q  210 ttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaac 309  Q
    |||| ||||||||||||||||||| |||||||||||||||||  ||||||||||  ||||||||||||| ||||||||||||||||| ||  | || |||    
T  48136990 ttaccgagtttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcagtttctggtaaaattagaaggtttgacgagtttgactgagttaac 48136891  T
Q  310 acttggtaaactcgtgtaaactc 332  Q
    ||| | |||| ||||||||||||    
T  48136890 actcgataaattcgtgtaaactc 48136868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 186 - 291
Target Start/End: Original strand, 32884190 - 32884295
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| |||||||||||||||||||  ||||||| ||||||||  ||||||||||  |||||||||||||| |||||    
T  32884190 aaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgagttaactctgaggtaaactctgtttctggtaaaatcggaagg 32884289  T
Q  286 tttgac 291  Q
    ||||||    
T  32884290 tttgac 32884295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 186 - 293
Target Start/End: Complemental strand, 33892020 - 33891913
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || ||||  ||||||||||||||||||  |||||||||||||||| |||||||| ||| |||||||||||||  |||||    
T  33892020 aaatcgagtgttaactctccgagattaccaagtttacgtttttaggtacaaaaatcgtgttaactctaaggtaaaatcggtttctggtaaaattggaagg 33891921  T
Q  286 tttgacga 293  Q
    ||| ||||    
T  33891920 tttaacga 33891913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 510065 - 510207
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||| ||||| || |||  |||||||| ||||||||||  ||||||||||||||||  ||||||| ||| |||||||||||||  |||||    
T  510065 aaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaagg 510164  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||||| |||||||||||||||    
T  510165 tttaacgagtttgactgagttaacactcggtaaactcgtgtaa 510207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 186 - 332
Target Start/End: Original strand, 7993576 - 7993722
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| |||| ||  |||||| |||  |||||||||||||||   ||||||||||| |||||||||||||| |||||    
T  7993576 aaatcgagtgttaactctccgagattaccgagtatatatttttaagtacaaaaatcgtgttaactatgaggtaaactcggtttctggtaaaatcggaagg 7993675  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
    ||| ||||||| ||  | || |||||| |||||||| ||||||||||    
T  7993676 tttaacgagtttgactgagttaacactcggtaaactggtgtaaactc 7993722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 18838829 - 18838939
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| |||||||| ||||||||||  ||||||||||||||||  ||||||| ||| |||||||||||||  |||||    
T  18838829 aaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaagg 18838928  T
Q  286 tttgacgagtt 296  Q
    ||| |||||||    
T  18838929 tttaacgagtt 18838939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 23101710 - 23101852
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||| ||||| || |||  |||||||| ||||||||||  |||||||||||||||| |||||||| ||  |||||||||||||  |||||    
T  23101710 aaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctaaggtaaaatcagtttctggtaaaattggaagg 23101809  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||||| |||||||||||||||    
T  23101810 tttaacgagtttgactgagttaacactcggtaaactcgtgtaa 23101852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 28034634 - 28034492
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||  || |||| ||||||||||||||| |||  ||||||||||||||||  | ||||| ||| |||||||||||||  |||||    
T  28034634 aaatcgagtgttaactctctgagattaccgagtttacgtttttatgtacaaaaatcgtgttaactctgatgtaaaatcggtttctggtaaaattggaagg 28034535  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||||||||||||||| |||||    
T  28034534 tttaacgagtttgactgagttaacacttggtaaactcatgtaa 28034492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 28342730 - 28342872
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||| ||||| || |||  |||||||| ||||||||||  ||||||||||||||||  ||||||| ||| |||||||||||||  |||||    
T  28342730 aaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaagg 28342829  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||||| |||||||||||||||    
T  28342830 tttaacgagtttgactgagttaacactcggtaaactcgtgtaa 28342872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 186 - 326
Target Start/End: Original strand, 14741398 - 14741538
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||| |||| |||||  | ||||||| |||||||||| |||||||   |||| |||||||||||| ||||||||||||||||| |||||||| ||| |    
T  14741398 aaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaag 14741497  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgt 326  Q
    ||||||||||| || || || ||||||  ||||||||||||    
T  14741498 tttgacgagtttgaccgagttaacactcagtaaactcgtgt 14741538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 215 - 331
Target Start/End: Original strand, 21024067 - 21024183
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    ||||||||| ||||||||  ||||| |||||||||||||||||||||||| ||| |||| ||||| ||| |||||||||||| || || || ||||| ||    
T  21024067 gagtttacgattttaggtgacaaaaacgtgttaactcgaaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagttaacacgtg 21024166  T
Q  315 gtaaactcgtgtaaact 331  Q
     ||||||||||||||||    
T  21024167 ttaaactcgtgtaaact 21024183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 29614581 - 29614439
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||| ||||| || |||  |||||||| ||||||||||  ||||||||||||||||  ||||||| ||| |||||||||||||   ||||    
T  29614581 aaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattgaaagg 29614482  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||||| |||||||||||||||    
T  29614481 tttaacgagtttgactgagttaacactcggtaaactcgtgtaa 29614439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 39784526 - 39784668
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||| ||| | || |||  |||||||| ||||||||||  ||||||||||||||||  ||||||| ||| |||||||||||||  |||||    
T  39784526 aaatcgagtgttaaatcttcgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaagg 39784625  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||||| |||||||||||||||    
T  39784626 tttaacgagtttgacagagttaacactcggtaaactcgtgtaa 39784668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 296
Target Start/End: Complemental strand, 40460500 - 40460390
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||| | || |||| ||||||||| |||||||||  ||||||||||||||||  ||||||| ||| |||||||||||||  |||||    
T  40460500 aaatcgagtgttaactcttcgagattaccgagtttacgcttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaagg 40460401  T
Q  286 tttgacgagtt 296  Q
    ||| |||||||    
T  40460400 tttaacgagtt 40460390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 11735289 - 11735208
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagtt 296  Q
    ||||||||| ||||||||  |||||||||||||||||| |||||||||||||||||||||||||| ||| ||||| ||||||    
T  11735289 gagtttacgattttaggtcccaaaatcgtgttaactcggaggtaaactcgatttctggtaaaatcggaatgtttgccgagtt 11735208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 3023353 - 3023495
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||  ||||||| |||||||||||  |||||| ||||||||   ||||||| ||| |||||| ||||||  |||||    
T  3023353 aaatcgagtgttaactctccgagattatcgagtttatgtttttaggtacaaaaatcatgttaactttgaggtaaaatcggtttctgataaaattggaagg 3023452  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||||| |||||||||||||||    
T  3023453 tttaacgagtttgactgagttaacactcggtaaactcgtgtaa 3023495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 186 - 296
Target Start/End: Complemental strand, 26201918 - 26201808
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||||||||||||  || ||||||| || ||||| |||||||||| ||||||||||| |||||| |||||||||| |||  || ||||||| ||| |    
T  26201918 aaatcgagtgttaacttgccgagtttaccgaatttacatttttaggtaccaaaatcgtgtaaactcggaggtaaactcaattattgctaaaatcggaatg 26201819  T
Q  286 tttgacgagtt 296  Q
    |||||||||||    
T  26201818 tttgacgagtt 26201808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 186 - 276
Target Start/End: Original strand, 33383093 - 33383183
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaa 276  Q
    |||||||||||||||||||| || |||| ||||||||||||||||||| |||||||||| ||||||  || |||||||| |||||| ||||    
T  33383093 aaatcgagtgttaactctccgagattaccgagtttacgtttttaggtaccaaaatcgtggtaactctgagataaactcggtttctgataaa 33383183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 39028506 - 39028648
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| |||||||||||||||||||  ||||| |||| |||||  ||||||| ||| ||||||||| |||  ||||     
T  39028506 aaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaattgtgtaaactctgaggtaaaatcggtttctggtacaattggaaga 39028605  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || ||||||  ||||||||||||||    
T  39028606 tttaacgagtttgactgagttaacactcagtaaactcgtgtaa 39028648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 237 - 338
Target Start/End: Original strand, 30823108 - 30823209
Alignment:
Q  237 aaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactcaatc 336  Q
    |||||||||||||||  ||||||||||| ||||| |||||||| |||||||  ||||||| ||| | || |||||| ||||||||||||||||||| |||    
T  30823108 aaatcgtgttaactctgaggtaaactcggtttctagtaaaatcggaaggttcaacgagtttgattgagttaacactcggtaaactcgtgtaaactcgatc 30823207  T
Q  337 ga 338  Q
    ||    
T  30823208 ga 30823209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 33497192 - 33497111
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagtt 296  Q
    |||||||| |||||| ||||||||||||||| |||||| |||||||||||||||||| ||||||  ||| ||||||||||||    
T  33497192 gagtttacatttttaagtatcaaaatcgtgtcaactcggaggtaaactcgatttctgataaaattggaatgtttgacgagtt 33497111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 186 - 322
Target Start/End: Complemental strand, 4640002 - 4639866
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||| |||| |||||  | ||||||| |||||||||| |||||||   |||| |||||||||||| |||||||||| ||||||||||||||| |||      
T  4640002 aaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactctatttctggtaaaatcggaaat 4639903  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactc 322  Q
    ||||||||||| || || || ||||||  ||||||||    
T  4639902 tttgacgagtttgaccgagttaacactcagtaaactc 4639866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 216 - 332
Target Start/End: Complemental strand, 14732393 - 14732278
Alignment:
Q  216 agtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttgg 315  Q
    |||||||||||||||||  ||||| |||||||||||| ||||||||| | ||| |||| ||||| ||| |||||||||||| || || |||||||| ||     
T  14732393 agtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaacttggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgt 14732294  T
Q  316 taaactcgtgtaaactc 332  Q
    |||||||| ||||||||    
T  14732293 taaactcg-gtaaactc 14732278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 219 - 323
Target Start/End: Original strand, 23016997 - 23017101
Alignment:
Q  219 ttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggtaa 318  Q
    |||||||||||  ||||||||| ||||||||| | ||||||||||||||||| |||||||  |||| ||||||||||| || || || |||||| |||||    
T  23016997 ttacgtttttacatatcaaaattgtgttaacttggaggtaaactcgatttctcgtaaaattggaagatttgacgagtttgaccgagttaacactcggtaa 23017096  T
Q  319 actcg 323  Q
    |||||    
T  23017097 actcg 23017101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 256 - 332
Target Start/End: Original strand, 21067869 - 21067945
Alignment:
Q  256 gtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
    |||||||||||||||||||||||| |||||||| ||||||| ||  | || |||||| |||||||||||||||||||    
T  21067869 gtaaactcgatttctggtaaaatcggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaaactc 21067945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 207 - 296
Target Start/End: Original strand, 16709428 - 16709515
Alignment:
Q  207 agtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagtt 296  Q
    ||||||| ||||||||||||||||||| |||||||||| ||||||  ||||||||||  ||  ||||||| || ||||||||||| ||||    
T  16709428 agtttaccgagtttacgtttttaggtaccaaaatcgtggtaactctgaggtaaactcagtt--tggtaaactcggaaggtttgacaagtt 16709515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 207 - 296
Target Start/End: Original strand, 17683664 - 17683751
Alignment:
Q  207 agtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagtt 296  Q
    ||||||| ||||||||||||||||||| |||||||||| ||||||  ||||||||||  ||  ||||||| || ||||||||||| ||||    
T  17683664 agtttaccgagtttacgtttttaggtaccaaaatcgtggtaactctgaggtaaactcagtt--tggtaaactcggaaggtttgacaagtt 17683751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 323
Target Start/End: Original strand, 35313558 - 35313666
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    |||||||||||||||| |  ||||| |||||||||||| ||||||| ||| ||| |||| ||||| ||| |||||| ||||| || || || ||||| ||    
T  35313558 gagtttacgtttttagatggcaaaaccgtgttaactcggaggtaaattcggtttttggtgaaatcggaaagtttgatgagtttgaccgagttaacacgtg 35313657  T
Q  315 gtaaactcg 323  Q
     ||||||||    
T  35313658 ttaaactcg 35313666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 321
Target Start/End: Original strand, 31174710 - 31174816
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    |||||||| ||||||||| |||||||| |||||| ||| ||||||| | | ||| || | ||||||||| |||||||||||| ||  | || ||||| ||    
T  31174710 gagtttacatttttaggtgtcaaaatcatgttaaatcggaggtaaaatagttttttgttcaaatcagaatgtttgacgagtttgagtgagttaacacgtg 31174809  T
Q  315 gtaaact 321  Q
    |||||||    
T  31174810 gtaaact 31174816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 480
Target Start/End: Original strand, 43172384 - 43172440
Alignment:
Q  424 agttagggttgcgatttcgacggtggaaattcagttttcgacaccgatgattacgac 480  Q
    ||||||||||||||||  |||| ||||||||||| ||||||| ||||||||| ||||    
T  43172384 agttagggttgcgattctgacgatggaaattcagatttcgacgccgatgattgcgac 43172440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 290
Target Start/End: Complemental strand, 37392723 - 37392648
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttga 290  Q
    ||||||||||||||||||  ||||| | ||| |||||| || |||||| ||||| |||| ||||||||| ||||||    
T  37392723 gagtttacgtttttaggtggcaaaaacatgtaaactcggagataaacttgatttttggtgaaatcagaaagtttga 37392648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 321
Target Start/End: Complemental strand, 1254567 - 1254461
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    ||||||||| |||||||| ||||||   | |||| ||||||||||||||||||| |||| ||||| ||  |||||| ||||| || || || ||||| ||    
T  1254567 gagtttacgattttaggtgtcaaaaattttttaaatcgaaggtaaactcgatttttggtgaaatcggactgtttgatgagtttgaccgagttaacacgtg 1254468  T
Q  315 gtaaact 321  Q
     ||||||    
T  1254467 ttaaact 1254461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 296
Target Start/End: Original strand, 6268513 - 6268583
Alignment:
Q  226 tttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagtt 296  Q
    ||||||| |||||| |||||||||||| | ||||||| | ||| |||| |||| |||| ||||||||||||    
T  6268513 tttaggtgtcaaaaacgtgttaactcggatgtaaactaggtttttggtgaaattagaatgtttgacgagtt 6268583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 462
Target Start/End: Original strand, 16709856 - 16709894
Alignment:
Q  424 agttagggttgcgatttcgacggtggaaattcagttttc 462  Q
    |||||||||||||||| ||||||||||||||||| ||||    
T  16709856 agttagggttgcgattccgacggtggaaattcagatttc 16709894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 462
Target Start/End: Original strand, 17684092 - 17684130
Alignment:
Q  424 agttagggttgcgatttcgacggtggaaattcagttttc 462  Q
    |||||||||||||||| ||||||||||||||||| ||||    
T  17684092 agttagggttgcgattccgacggtggaaattcagatttc 17684130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 242 - 328
Target Start/End: Original strand, 47067185 - 47067271
Alignment:
Q  242 gtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||||||||||  || |||| |||||||||||||||||   ||||||| ||||||| ||  | || |||||| |||||||||||||||    
T  47067185 gtgttaactctgagataaaatcgatttctggtaaaattgaaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 47067271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 323
Target Start/End: Original strand, 38910485 - 38910590
Alignment:
Q  218 tttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggta 317  Q
    ||||||||||||| |  ||| | ||||| ||||||||||||| |||| ||| |||| ||||| ||| |||||||||| | || || || ||||| || ||    
T  38910485 tttacgtttttagatggcaagaacgtgtaaactcgaaggtaagctcggtttttggtgaaatcggaaagtttgacgagattgaccgagttaacacgtgtta 38910584  T
Q  318 aactcg 323  Q
    ||||||    
T  38910585 aactcg 38910590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 215 - 323
Target Start/End: Original strand, 19594212 - 19594319
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 314  Q
    |||||||||||||||| |  ||||| ||||| |||| | || |||||||| ||| |||| ||||| ||| |||||||||||| || || || ||||| ||    
T  19594212 gagtttacgtttttagatggcaaaa-cgtgtaaactaggagataaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagttaacacgtg 19594310  T
Q  315 gtaaactcg 323  Q
     ||||||||    
T  19594311 ttaaactcg 19594319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 37915995 - 37915931
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatc 279  Q
    |||||||||| |||||||   |||| ||| |||||||  ||||||||||||||| ||||||||||    
T  37915995 gagtttacgtgtttaggtgctaaaagcgttttaactcagaggtaaactcgatttatggtaaaatc 37915931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 186 - 332
Target Start/End: Complemental strand, 39416 - 39270
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| ||||||||||||||||||| ||||||||||||||| |  |||| |||||| ||||||||||||||  ||||    
T  39416 aaatcgagtgttaactctccgagattaccgagtttacgtttttaggtaccaaaatcgtgttaaccctgaggtcaactcggtttctggtaaaatcgaaagg 39317  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
    ||||||||||| ||  | || | |||||| |||||||||||||||||    
T  39316 tttgacgagtttgactgagttagcacttgataaactcgtgtaaactc 39270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 186 - 357
Target Start/End: Original strand, 89252 - 89414
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    ||||||||||||||||||   ||||||  ||||||| ||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||  |||||    
T  89252 aaatcgagtgttaactctgtgagtttatcgagtttaagtttttaggtaccaatatcgtgttaacttgaaggtaaactcgatttctggtaaaattggaagg 89351  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactcaatcgagttttacgagtttccatct 357  Q
    ||||||||||| ||||| || |||         |||||||||||||| | |||||||||||||||| |||||    
T  89352 tttgacgagtttgatcgagttaac---------actcgtgtaaactccaccgagttttacgagtttacatct 89414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 424 - 456
Target Start/End: Original strand, 89602 - 89634
Alignment:
Q  424 agttagggttgcgatttcgacggtggaaattca 456  Q
    |||||||||||||||| ||||||||||||||||    
T  89602 agttagggttgcgattccgacggtggaaattca 89634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 10945 - 11087
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| |||||||| ||||||||||  ||||||||||||||||  ||||||| ||||||| |||||||||  |||||    
T  10945 aaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaattcgatttttggtaaaattggaagg 11044  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaa 328  Q
    ||| ||||||| ||  | || |||||| |||||||||||||||    
T  11045 tttaacgagtttgactgagttaacactcggtaaactcgtgtaa 11087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 1287 - 1397
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||||| || |||| |||||||||||||||||||  ||||||||||||||||  ||||||| ||| ||||| |||||||  |||||    
T  1287 aaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttcttgtaaaattggaagg 1386  T
Q  286 tttgacgagtt 296  Q
    ||| |||||||    
T  1387 tttaacgagtt 1397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0573 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 8857 - 8931
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttg 289  Q
    |||||||| | |||||||| |||||||||||||||||  |||||||||||||||||||||||||| |||||||||    
T  8857 gagtttacatgtttaggtaccaaaatcgtgttaactctgaggtaaactcgatttctggtaaaatcggaaggtttg 8931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0573; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 424 - 456
Target Start/End: Original strand, 9181 - 9213
Alignment:
Q  424 agttagggttgcgatttcgacggtggaaattca 456  Q
    ||||||||||| |||||||||||||||||||||    
T  9181 agttagggttgtgatttcgacggtggaaattca 9213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 242 - 334
Target Start/End: Complemental strand, 16754 - 16662
Alignment:
Q  242 gtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactcaa 334  Q
    ||||||||||  ||||||||||| ||||||||||||||  ||||||| ||||||| ||  | || ||||||||||||||||| ||||||||||    
T  16754 gtgttaactctgaggtaaactcggtttctggtaaaatcgaaaggtttaacgagtttgactgagttaacacttggtaaactcgggtaaactcaa 16662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 242 - 334
Target Start/End: Complemental strand, 20990 - 20898
Alignment:
Q  242 gtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactcaa 334  Q
    ||||||||||  ||||||||||| ||||||||||||||  ||||||| ||||||| ||  | || ||||||||||||||||| ||||||||||    
T  20990 gtgttaactctgaggtaaactcggtttctggtaaaatcgaaaggtttaacgagtttgactgagttaacacttggtaaactcgggtaaactcaa 20898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 242 - 334
Target Start/End: Original strand, 28811 - 28903
Alignment:
Q  242 gtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactcaa 334  Q
    ||||||||||  ||||||||||| ||||||||||||||  ||||||| ||||||| ||  | || ||||||||||||||||| ||||||||||    
T  28811 gtgttaactctgaggtaaactcggtttctggtaaaatcgaaaggtttaacgagtttgactgagttaacacttggtaaactcgggtaaactcaa 28903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 186 - 332
Target Start/End: Original strand, 1339 - 1485
Alignment:
Q  186 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaagg 285  Q
    |||||||||||||||||   || |  || ||||||||||||||||||  ||||| | |||||||| | ||||||||||| ||| | || ||||| ||| |    
T  1339 aaatcgagtgttaactcgtaaactcgaccgagtttacgtttttaggtggcaaaaacatgttaacttggaggtaaactcggtttttagtgaaatcggaaag 1438  T
Q  286 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaactc 332  Q
    |||||||||||  | || || ||||| || |||||||||||||||||    
T  1439 tttgacgagtttaaccgagttaacacgtgttaaactcgtgtaaactc 1485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 273
Target Start/End: Complemental strand, 25700 - 25642
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcgatttctggt 273  Q
    ||||||||||||||||||  ||||| |||||||||||| ||||||||||| ||| ||||    
T  25700 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggt 25642  T

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Target: scaffold0421 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0421
Description:

Target: scaffold0421; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 242 - 321
Target Start/End: Original strand, 1727 - 1806
Alignment:
Q  242 gtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttggtaaact 321  Q
    ||||||||||| ||||||||||||||| |||| ||||| ||| |||||||||||| || || || ||||| || ||||||    
T  1727 gtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgagttaacacgtgttaaact 1806  T

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Target: scaffold0457 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 215 - 260
Target Start/End: Complemental strand, 6238 - 6193
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaa 260  Q
    ||||||||||| |||||| ||||||||||||||||||||| |||||    
T  6238 gagtttacgttcttaggtgtcaaaatcgtgttaactcgaaagtaaa 6193  T

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Target: scaffold0433 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 391 - 440
Alignment:
Q  215 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaactcg 264  Q
    ||||||||||||||| ||  ||||| |||||||||||| |||||||||||    
T  391 gagtttacgtttttatgtggcaaaaacgtgttaactcggaggtaaactcg 440  T

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Target: scaffold0347 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 15132 - 15192
Alignment:
Q  236 aaaatcgtgttaactcgaaggtaaactcgatttctggtaaaatcagaaggtttgacgagtt 296  Q
    ||||||||||||||||  ||||||| ||| ||| |||||||||  |||||||| |||||||    
T  15132 aaaatcgtgttaactctgaggtaaaatcggtttatggtaaaattggaaggtttaacgagtt 15192  T

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