View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17554_low_6 (Length: 515)

Name: NF17554_low_6
Description: NF17554
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17554_low_6
NF17554_low_6
[»] chr6 (49 HSPs)
chr6 (200-506)||(21894319-21894637)
chr6 (113-338)||(23648174-23648399)
chr6 (140-311)||(31099983-31100154)
chr6 (178-335)||(15591088-15591252)
chr6 (140-311)||(34232876-34233054)
chr6 (174-304)||(6104646-6104776)
chr6 (140-311)||(10856140-10856311)
chr6 (120-338)||(20563380-20563606)
chr6 (140-279)||(2442432-2442571)
chr6 (140-279)||(12297372-12297511)
chr6 (140-311)||(31451923-31452093)
chr6 (194-322)||(26561411-26561539)
chr6 (140-279)||(20804997-20805136)
chr6 (140-279)||(32731766-32731905)
chr6 (113-279)||(33540726-33540892)
chr6 (140-279)||(558367-558507)
chr6 (139-279)||(12432621-12432761)
chr6 (136-279)||(5301602-5301745)
chr6 (202-339)||(12140812-12140956)
chr6 (140-279)||(30811149-30811288)
chr6 (140-279)||(34685016-34685154)
chr6 (203-297)||(5893876-5893970)
chr6 (174-335)||(7292486-7292654)
chr6 (140-279)||(14227536-14227674)
chr6 (140-279)||(28076430-28076569)
chr6 (202-279)||(5943061-5943138)
chr6 (174-279)||(7317611-7317716)
chr6 (140-306)||(33453743-33453909)
chr6 (140-278)||(34439690-34439828)
chr6 (180-279)||(2970722-2970821)
chr6 (140-279)||(3108006-3108146)
chr6 (176-279)||(6709696-6709799)
chr6 (174-279)||(5681561-5681666)
chr6 (140-251)||(1806343-1806454)
chr6 (200-339)||(9896773-9896917)
chr6 (202-279)||(31049403-31049480)
chr6 (203-319)||(3636601-3636717)
chr6 (112-166)||(3832395-3832449)
chr6 (140-279)||(11015597-11015736)
chr6 (140-279)||(29823036-29823175)
chr6 (197-279)||(32563244-32563326)
chr6 (220-313)||(11443033-11443133)
chr6 (223-279)||(29414924-29414980)
chr6 (223-279)||(34904037-34904093)
chr6 (203-278)||(19415351-19415426)
chr6 (200-305)||(15131360-15131465)
chr6 (113-154)||(22756521-22756562)
chr6 (202-274)||(1225501-1225573)
chr6 (266-313)||(22756562-22756609)
[»] chr8 (74 HSPs)
chr8 (113-443)||(13969955-13970289)
chr8 (145-339)||(39746879-39747073)
chr8 (113-279)||(43849207-43849373)
chr8 (139-311)||(31688018-31688190)
chr8 (113-339)||(29189659-29189899)
chr8 (140-311)||(43276739-43276910)
chr8 (113-304)||(2855063-2855253)
chr8 (140-311)||(41313382-41313553)
chr8 (174-279)||(7378889-7378994)
chr8 (142-279)||(8270915-8271052)
chr8 (176-311)||(36112809-36112944)
chr8 (140-311)||(45141416-45141594)
chr8 (140-339)||(3427561-3427760)
chr8 (140-279)||(31581701-31581840)
chr8 (140-279)||(36681447-36681586)
chr8 (140-279)||(39702313-39702452)
chr8 (140-279)||(44827317-44827456)
chr8 (140-314)||(9210993-9211167)
chr8 (140-277)||(17081661-17081798)
chr8 (142-279)||(28716673-28716810)
chr8 (176-311)||(1893809-1893944)
chr8 (140-279)||(6338325-6338464)
chr8 (140-279)||(25023313-25023452)
chr8 (140-279)||(27781109-27781248)
chr8 (142-277)||(28709316-28709451)
chr8 (140-279)||(31478083-31478222)
chr8 (140-279)||(32541230-32541369)
chr8 (143-279)||(38171427-38171563)
chr8 (140-279)||(17115545-17115684)
chr8 (202-279)||(16422898-16422975)
chr8 (174-279)||(41693906-41694011)
chr8 (142-279)||(42142735-42142872)
chr8 (136-335)||(8436461-8436667)
chr8 (140-279)||(10618813-10618952)
chr8 (116-279)||(38780644-38780807)
chr8 (202-279)||(2642418-2642495)
chr8 (202-319)||(32099606-32099723)
chr8 (140-279)||(39871272-39871410)
chr8 (142-279)||(22877925-22878062)
chr8 (200-279)||(35243352-35243431)
chr8 (205-279)||(37560529-37560603)
chr8 (140-279)||(39320066-39320205)
chr8 (140-279)||(40223084-40223222)
chr8 (136-279)||(44157200-44157343)
chr8 (202-279)||(3511287-3511364)
chr8 (202-279)||(11741103-11741180)
chr8 (202-279)||(23676941-23677018)
chr8 (202-314)||(34395311-34395424)
chr8 (145-346)||(1363725-1363926)
chr8 (142-279)||(24652277-24652413)
chr8 (176-279)||(36590180-36590282)
chr8 (140-279)||(11298041-11298180)
chr8 (176-300)||(37587697-37587821)
chr8 (219-311)||(42203371-42203463)
chr8 (234-311)||(2732313-2732390)
chr8 (218-279)||(13888326-13888387)
chr8 (200-279)||(9370316-9370396)
chr8 (219-313)||(39677442-39677543)
chr8 (177-279)||(40045444-40045546)
chr8 (234-320)||(37801089-37801175)
chr8 (214-279)||(44263388-44263453)
chr8 (202-279)||(22957378-22957455)
chr8 (194-267)||(26293828-26293901)
chr8 (194-267)||(26307085-26307158)
chr8 (113-154)||(39677349-39677390)
chr8 (219-274)||(44318316-44318371)
chr8 (206-279)||(40551882-40551954)
chr8 (175-215)||(44263065-44263105)
chr8 (200-339)||(18410891-18411030)
chr8 (248-338)||(14171677-14171767)
chr8 (289-329)||(5320480-5320520)
chr8 (268-320)||(7117753-7117805)
chr8 (207-339)||(14649211-14649338)
chr8 (234-282)||(41123769-41123817)
[»] chr4 (113 HSPs)
chr4 (219-443)||(24954050-24954282)
chr4 (113-313)||(20511386-20511586)
chr4 (178-339)||(4465412-4465573)
chr4 (113-339)||(41864021-41864248)
chr4 (140-313)||(36196878-36197051)
chr4 (140-311)||(55495849-55496020)
chr4 (112-335)||(30562794-30563016)
chr4 (140-311)||(31678973-31679144)
chr4 (180-306)||(32101709-32101835)
chr4 (176-306)||(37047069-37047199)
chr4 (113-304)||(20148778-20148971)
chr4 (140-314)||(35580911-35581085)
chr4 (140-314)||(55829008-55829182)
chr4 (139-311)||(33114978-33115157)
chr4 (177-301)||(48056585-48056709)
chr4 (180-335)||(50502284-50502440)
chr4 (140-304)||(35777362-35777526)
chr4 (200-339)||(42085663-42085802)
chr4 (136-335)||(52707937-52708142)
chr4 (140-279)||(4391709-4391848)
chr4 (113-339)||(11050293-11050520)
chr4 (140-311)||(37115252-37115423)
chr4 (140-279)||(42116900-42117039)
chr4 (174-279)||(25235183-25235288)
chr4 (194-319)||(31435064-31435189)
chr4 (140-311)||(43225646-43225818)
chr4 (140-279)||(8829816-8829955)
chr4 (140-279)||(11151940-11152079)
chr4 (140-311)||(29663933-29664104)
chr4 (140-279)||(45906143-45906282)
chr4 (140-279)||(52669998-52670137)
chr4 (140-279)||(53407193-53407332)
chr4 (142-279)||(12233968-12234105)
chr4 (200-311)||(33005077-33005188)
chr4 (140-279)||(3009715-3009854)
chr4 (140-279)||(7706376-7706515)
chr4 (140-279)||(18582848-18582987)
chr4 (140-279)||(22892532-22892671)
chr4 (140-279)||(22944196-22944335)
chr4 (140-279)||(27397767-27397906)
chr4 (140-279)||(35190617-35190756)
chr4 (140-279)||(46895287-46895426)
chr4 (140-311)||(47417444-47417615)
chr4 (140-279)||(56372439-56372578)
chr4 (195-339)||(21633750-21633901)
chr4 (133-311)||(37831919-37832096)
chr4 (113-279)||(56270092-56270258)
chr4 (142-279)||(4517192-4517329)
chr4 (142-279)||(8941910-8942047)
chr4 (139-279)||(26826524-26826664)
chr4 (200-279)||(43078197-43078276)
chr4 (140-279)||(4939387-4939525)
chr4 (140-279)||(11600687-11600826)
chr4 (140-279)||(19513883-19514022)
chr4 (140-279)||(22038358-22038497)
chr4 (140-279)||(22430639-22430778)
chr4 (140-279)||(23867870-23868009)
chr4 (140-279)||(28307259-28307398)
chr4 (140-279)||(29413535-29413674)
chr4 (140-279)||(39087559-39087698)
chr4 (140-279)||(55684699-55684838)
chr4 (140-279)||(55856528-55856664)
chr4 (174-279)||(5465411-5465516)
chr4 (174-279)||(9031996-9032101)
chr4 (174-279)||(55764597-55764702)
chr4 (205-333)||(8716865-8716993)
chr4 (146-279)||(21369890-21370023)
chr4 (176-279)||(25440485-25440588)
chr4 (203-314)||(40497362-40497473)
chr4 (174-302)||(1031325-1031453)
chr4 (202-279)||(4355593-4355670)
chr4 (202-279)||(27185633-27185710)
chr4 (202-279)||(31338501-31338578)
chr4 (206-319)||(44525707-44525820)
chr4 (175-279)||(37970333-37970437)
chr4 (140-311)||(15635946-15636124)
chr4 (140-279)||(4392727-4392865)
chr4 (202-339)||(23113410-23113554)
chr4 (205-311)||(31953224-31953330)
chr4 (202-279)||(30366147-30366224)
chr4 (218-359)||(31011003-31011143)
chr4 (202-279)||(55358339-55358416)
chr4 (203-279)||(51011066-51011142)
chr4 (176-279)||(44442122-44442224)
chr4 (142-273)||(35468021-35468152)
chr4 (140-279)||(35822300-35822439)
chr4 (202-279)||(9043611-9043688)
chr4 (219-339)||(17715647-17715767)
chr4 (194-306)||(39068884-39068996)
chr4 (234-349)||(2320099-2320214)
chr4 (201-339)||(52713559-52713704)
chr4 (202-279)||(23162667-23162745)
chr4 (140-230)||(33005178-33005268)
chr4 (222-311)||(45780726-45780815)
chr4 (219-279)||(42124680-42124740)
chr4 (200-303)||(38048854-38048957)
chr4 (219-305)||(40119903-40119996)
chr4 (113-166)||(6902237-6902290)
chr4 (175-279)||(37337678-37337782)
chr4 (140-256)||(53273122-53273238)
chr4 (266-339)||(3932183-3932256)
chr4 (206-279)||(36486386-36486459)
chr4 (140-251)||(29656722-29656833)
chr4 (234-335)||(12928952-12929053)
chr4 (220-340)||(26443389-26443516)
chr4 (112-153)||(30623376-30623417)
chr4 (218-319)||(53224309-53224410)
chr4 (223-279)||(49239220-49239276)
chr4 (142-221)||(29656597-29656676)
chr4 (140-210)||(17715588-17715658)
chr4 (113-158)||(49545226-49545271)
chr4 (114-154)||(21633956-21633996)
chr4 (223-279)||(36008019-36008075)
[»] chr3 (98 HSPs)
chr3 (140-506)||(44946974-44947345)
chr3 (140-359)||(37489850-37490068)
chr3 (140-335)||(193405-193600)
chr3 (113-306)||(37713109-37713312)
chr3 (140-339)||(42217671-42217870)
chr3 (140-311)||(44748759-44748930)
chr3 (140-311)||(46247937-46248108)
chr3 (175-279)||(29203032-29203136)
chr3 (140-311)||(8872881-8873052)
chr3 (174-339)||(20450500-20450672)
chr3 (140-339)||(39719362-39719560)
chr3 (140-311)||(40479994-40480165)
chr3 (140-311)||(43525751-43525922)
chr3 (176-311)||(48943033-48943168)
chr3 (140-279)||(16127144-16127283)
chr3 (140-279)||(19948323-19948462)
chr3 (140-279)||(29081286-29081425)
chr3 (140-279)||(37528728-37528867)
chr3 (140-311)||(37713938-37714109)
chr3 (140-279)||(40563368-40563507)
chr3 (140-279)||(44845632-44845771)
chr3 (140-279)||(45368618-45368757)
chr3 (174-337)||(33897840-33898003)
chr3 (180-279)||(41518409-41518508)
chr3 (143-279)||(52857907-52858043)
chr3 (140-279)||(24536559-24536698)
chr3 (140-279)||(26540968-26541107)
chr3 (140-279)||(28676895-28677034)
chr3 (140-279)||(35499609-35499748)
chr3 (140-279)||(37088292-37088431)
chr3 (140-279)||(38185778-38185917)
chr3 (140-279)||(45345013-45345152)
chr3 (140-279)||(52794903-52795042)
chr3 (175-319)||(2598638-2598782)
chr3 (142-311)||(21707161-21707330)
chr3 (142-279)||(49853048-49853185)
chr3 (143-279)||(2579932-2580068)
chr3 (176-279)||(7041105-7041208)
chr3 (139-319)||(39876621-39876801)
chr3 (139-319)||(41246256-41246436)
chr3 (200-279)||(51003315-51003394)
chr3 (202-313)||(52868150-52868261)
chr3 (140-319)||(55305067-55305253)
chr3 (140-279)||(4240286-4240425)
chr3 (140-279)||(25570387-25570526)
chr3 (140-279)||(53779039-53779178)
chr3 (140-311)||(54541908-54542079)
chr3 (133-279)||(24628204-24628350)
chr3 (178-279)||(46972079-46972180)
chr3 (143-279)||(29718206-29718341)
chr3 (112-279)||(52225258-52225432)
chr3 (202-279)||(2121897-2121974)
chr3 (202-319)||(46318724-46318841)
chr3 (202-279)||(47897611-47897688)
chr3 (178-278)||(30548790-30548890)
chr3 (203-279)||(30864497-30864573)
chr3 (179-306)||(612099-612226)
chr3 (176-279)||(2851861-2851964)
chr3 (140-279)||(32026414-32026553)
chr3 (140-279)||(38891991-38892130)
chr3 (140-279)||(52166095-52166234)
chr3 (202-279)||(21603868-21603945)
chr3 (202-279)||(42497064-42497141)
chr3 (176-277)||(48378270-48378371)
chr3 (202-279)||(50317034-50317111)
chr3 (202-279)||(54672185-54672262)
chr3 (203-279)||(50499833-50499909)
chr3 (266-412)||(44810813-44810956)
chr3 (200-279)||(45693391-45693470)
chr3 (176-279)||(51709055-51709158)
chr3 (202-279)||(46627502-46627579)
chr3 (206-339)||(52595279-52595412)
chr3 (203-279)||(12063733-12063809)
chr3 (176-319)||(33391947-33392097)
chr3 (200-335)||(25146381-25146523)
chr3 (176-251)||(47173612-47173687)
chr3 (202-279)||(42465032-42465109)
chr3 (207-279)||(5506704-5506776)
chr3 (235-319)||(35100284-35100368)
chr3 (140-237)||(39469921-39470018)
chr3 (196-279)||(22257717-22257800)
chr3 (200-255)||(24350294-24350349)
chr3 (210-275)||(32982921-32982986)
chr3 (194-258)||(9338792-9338856)
chr3 (140-237)||(44545238-44545335)
chr3 (223-311)||(52931118-52931206)
chr3 (140-319)||(30814215-30814394)
chr3 (113-154)||(2187333-2187374)
chr3 (140-206)||(5505859-5505925)
chr3 (206-255)||(27446501-27446550)
chr3 (178-237)||(43740325-43740384)
chr3 (234-305)||(55118562-55118633)
chr3 (266-320)||(5506770-5506824)
chr3 (234-313)||(41538407-41538492)
chr3 (113-154)||(31558335-31558376)
chr3 (113-165)||(13285925-13285977)
chr3 (260-335)||(35474488-35474564)
chr3 (118-154)||(39719313-39719349)
[»] chr1 (92 HSPs)
chr1 (140-506)||(7780919-7781288)
chr1 (176-335)||(25134895-25135054)
chr1 (140-311)||(13121537-13121708)
chr1 (17-127)||(33151849-33151959)
chr1 (140-311)||(39826611-39826782)
chr1 (140-279)||(322876-323015)
chr1 (140-311)||(17046740-17046911)
chr1 (140-311)||(25601997-25602168)
chr1 (140-311)||(44718924-44719095)
chr1 (140-311)||(38967417-38967587)
chr1 (140-279)||(29586169-29586308)
chr1 (140-279)||(34318417-34318556)
chr1 (140-311)||(18347369-18347539)
chr1 (200-336)||(46056354-46056490)
chr1 (142-311)||(47134484-47134653)
chr1 (179-306)||(44956328-44956455)
chr1 (140-279)||(1918036-1918175)
chr1 (140-311)||(7710907-7711078)
chr1 (140-279)||(29704069-29704208)
chr1 (140-279)||(42064302-42064441)
chr1 (205-339)||(50540848-50540982)
chr1 (175-279)||(5697523-5697627)
chr1 (142-279)||(44909853-44909990)
chr1 (140-279)||(26204285-26204424)
chr1 (140-279)||(31150410-31150549)
chr1 (140-279)||(32368324-32368463)
chr1 (176-339)||(33151948-33152111)
chr1 (140-279)||(33524539-33524678)
chr1 (136-339)||(49240206-49240409)
chr1 (140-279)||(50351043-50351182)
chr1 (140-338)||(52703030-52703235)
chr1 (140-313)||(34086977-34087150)
chr1 (142-279)||(38676502-38676639)
chr1 (176-279)||(3270705-3270808)
chr1 (143-279)||(17499870-17500006)
chr1 (113-244)||(28429018-28429144)
chr1 (140-279)||(2497933-2498072)
chr1 (140-279)||(19898893-19899032)
chr1 (140-279)||(29374341-29374480)
chr1 (140-279)||(36838680-36838819)
chr1 (140-279)||(49220458-49220597)
chr1 (174-279)||(8221220-8221325)
chr1 (140-279)||(36301090-36301228)
chr1 (205-339)||(3391196-3391337)
chr1 (176-279)||(28868996-28869099)
chr1 (140-279)||(30721608-30721748)
chr1 (140-279)||(26843762-26843901)
chr1 (140-279)||(34319400-34319539)
chr1 (202-279)||(49822152-49822229)
chr1 (175-279)||(37703716-37703820)
chr1 (203-279)||(49185170-49185246)
chr1 (176-279)||(36043285-36043388)
chr1 (143-279)||(50171282-50171418)
chr1 (140-279)||(3660956-3661095)
chr1 (202-279)||(15313316-15313393)
chr1 (178-279)||(15348873-15348974)
chr1 (198-335)||(27659294-27659431)
chr1 (206-279)||(30774158-30774231)
chr1 (203-287)||(2028953-2029037)
chr1 (175-279)||(37672335-37672439)
chr1 (203-279)||(40887949-40888025)
chr1 (206-313)||(41004937-41005051)
chr1 (140-279)||(1507728-1507868)
chr1 (200-279)||(13570778-13570857)
chr1 (176-279)||(22098965-22099068)
chr1 (202-313)||(42963901-42964012)
chr1 (200-306)||(10628787-10628893)
chr1 (209-319)||(40719554-40719664)
chr1 (205-279)||(51422969-51423043)
chr1 (202-279)||(43727094-43727171)
chr1 (202-306)||(30495153-30495257)
chr1 (200-279)||(16085596-16085675)
chr1 (175-319)||(46369853-46370001)
chr1 (177-279)||(42614120-42614222)
chr1 (140-237)||(33561922-33562019)
chr1 (200-339)||(46087918-46088064)
chr1 (202-273)||(9769964-9770035)
chr1 (216-306)||(9169142-9169232)
chr1 (140-279)||(39583107-39583246)
chr1 (222-319)||(7024916-7025013)
chr1 (140-237)||(2479171-2479268)
chr1 (205-279)||(46928969-46929043)
chr1 (194-279)||(912718-912803)
chr1 (220-279)||(6814118-6814177)
chr1 (199-338)||(31259501-31259642)
chr1 (223-339)||(9894931-9895054)
chr1 (206-279)||(36379131-36379204)
chr1 (226-278)||(40935893-40935945)
chr1 (113-210)||(52071222-52071319)
chr1 (268-339)||(19715386-19715457)
chr1 (219-250)||(52071202-52071233)
chr1 (262-337)||(10120698-10120774)
[»] chr5 (81 HSPs)
chr5 (140-339)||(11100693-11100892)
chr5 (174-329)||(13936233-13936388)
chr5 (113-339)||(648511-648737)
chr5 (140-311)||(4221432-4221603)
chr5 (140-311)||(39246796-39246966)
chr5 (139-279)||(43402450-43402590)
chr5 (140-311)||(2671421-2671592)
chr5 (140-279)||(12774583-12774722)
chr5 (140-279)||(14647348-14647487)
chr5 (140-279)||(24793979-24794118)
chr5 (140-279)||(30299705-30299844)
chr5 (140-279)||(13228464-13228602)
chr5 (113-279)||(15530415-15530581)
chr5 (142-279)||(36685825-36685962)
chr5 (139-279)||(36027982-36028122)
chr5 (140-279)||(2236507-2236646)
chr5 (140-279)||(5997885-5998024)
chr5 (140-279)||(6603901-6604040)
chr5 (140-279)||(8023975-8024114)
chr5 (140-279)||(12713319-12713458)
chr5 (140-279)||(30412603-30412742)
chr5 (140-279)||(32381665-32381804)
chr5 (140-279)||(39744533-39744672)
chr5 (202-311)||(9587145-9587254)
chr5 (140-313)||(16474778-16474958)
chr5 (174-311)||(29392066-29392203)
chr5 (174-306)||(6893343-6893475)
chr5 (175-279)||(7651682-7651786)
chr5 (142-311)||(13156845-13157014)
chr5 (142-279)||(39275432-39275569)
chr5 (140-279)||(1174791-1174930)
chr5 (140-279)||(1711194-1711333)
chr5 (140-279)||(5591595-5591734)
chr5 (140-279)||(9160683-9160822)
chr5 (140-279)||(10697276-10697415)
chr5 (140-279)||(26699097-26699236)
chr5 (140-279)||(26968830-26968969)
chr5 (140-279)||(27130340-27130479)
chr5 (140-279)||(32382856-32382995)
chr5 (140-279)||(35235718-35235857)
chr5 (140-279)||(5381935-5382073)
chr5 (194-339)||(13921786-13921930)
chr5 (174-279)||(19347747-19347852)
chr5 (174-279)||(35236658-35236763)
chr5 (175-279)||(4379300-4379404)
chr5 (140-277)||(30774185-30774322)
chr5 (140-279)||(19956299-19956437)
chr5 (174-311)||(3669582-3669719)
chr5 (202-279)||(15443525-15443602)
chr5 (202-279)||(31168978-31169055)
chr5 (175-279)||(2178802-2178906)
chr5 (139-340)||(2497569-2497770)
chr5 (142-279)||(3037416-3037553)
chr5 (175-279)||(3670320-3670424)
chr5 (139-279)||(5521304-5521444)
chr5 (176-279)||(12363603-12363706)
chr5 (199-302)||(32321630-32321733)
chr5 (219-332)||(7896599-7896711)
chr5 (202-279)||(19525818-19525895)
chr5 (202-279)||(22977196-22977273)
chr5 (206-279)||(35640013-35640086)
chr5 (194-335)||(9627082-9627230)
chr5 (140-279)||(11663882-11664021)
chr5 (220-339)||(28812345-28812466)
chr5 (174-279)||(11062898-11063003)
chr5 (200-279)||(27005845-27005924)
chr5 (225-311)||(25872187-25872273)
chr5 (202-271)||(23920526-23920595)
chr5 (174-294)||(41471885-41472006)
chr5 (219-279)||(4657592-4657652)
chr5 (219-279)||(6349426-6349486)
chr5 (206-336)||(11780118-11780248)
chr5 (194-335)||(18480497-18480638)
chr5 (234-338)||(813769-813871)
chr5 (205-279)||(42323598-42323672)
chr5 (202-279)||(6280446-6280523)
chr5 (178-279)||(4875689-4875790)
chr5 (131-166)||(4657686-4657721)
chr5 (212-251)||(31408001-31408040)
chr5 (261-305)||(8638229-8638273)
chr5 (234-278)||(41686779-41686823)
[»] chr7 (73 HSPs)
chr7 (113-306)||(46757691-46757884)
chr7 (140-306)||(1342784-1342957)
chr7 (176-306)||(22642232-22642362)
chr7 (140-311)||(42375759-42375929)
chr7 (142-279)||(21254705-21254842)
chr7 (139-311)||(19831966-19832138)
chr7 (140-279)||(36246384-36246523)
chr7 (140-279)||(42587391-42587530)
chr7 (140-279)||(43254111-43254250)
chr7 (140-279)||(45686924-45687063)
chr7 (206-311)||(17192418-17192523)
chr7 (174-279)||(46879532-46879637)
chr7 (202-311)||(47587081-47587190)
chr7 (140-279)||(9487415-9487554)
chr7 (140-279)||(10312037-10312176)
chr7 (140-279)||(21374641-21374780)
chr7 (140-279)||(27089664-27089803)
chr7 (140-279)||(27188498-27188637)
chr7 (140-279)||(31511308-31511447)
chr7 (140-279)||(40258865-40259004)
chr7 (174-311)||(21313765-21313902)
chr7 (202-306)||(35000782-35000886)
chr7 (146-279)||(40106013-40106146)
chr7 (194-302)||(45672356-45672464)
chr7 (176-279)||(44596654-44596757)
chr7 (140-279)||(482990-483129)
chr7 (140-279)||(35587587-35587726)
chr7 (140-279)||(40637168-40637307)
chr7 (140-279)||(47470970-47471109)
chr7 (174-279)||(12345075-12345180)
chr7 (174-279)||(33026918-33027023)
chr7 (174-279)||(33203676-33203781)
chr7 (178-311)||(36436199-36436332)
chr7 (118-279)||(40893357-40893519)
chr7 (140-305)||(11466021-11466186)
chr7 (113-313)||(27869536-27869736)
chr7 (140-279)||(27655681-27655820)
chr7 (140-279)||(34709241-34709380)
chr7 (140-279)||(44743725-44743864)
chr7 (140-279)||(48832061-48832200)
chr7 (174-279)||(791341-791446)
chr7 (202-279)||(9485786-9485863)
chr7 (178-279)||(19757524-19757625)
chr7 (202-279)||(23029860-23029937)
chr7 (178-279)||(36612119-36612220)
chr7 (174-279)||(43134446-43134551)
chr7 (176-279)||(36407272-36407375)
chr7 (140-279)||(45222081-45222220)
chr7 (202-279)||(17844614-17844691)
chr7 (202-279)||(21742042-21742119)
chr7 (140-279)||(28425619-28425758)
chr7 (266-339)||(33609070-33609143)
chr7 (202-279)||(48313432-48313509)
chr7 (174-279)||(48590756-48590861)
chr7 (225-339)||(47584185-47584299)
chr7 (140-279)||(49148340-49148479)
chr7 (141-258)||(21316613-21316730)
chr7 (140-237)||(32168841-32168938)
chr7 (206-273)||(48620531-48620598)
chr7 (174-244)||(21740188-21740258)
chr7 (140-319)||(38481288-38481467)
chr7 (175-279)||(38531191-38531294)
chr7 (194-279)||(22621466-22621551)
chr7 (206-248)||(24170818-24170860)
chr7 (219-305)||(48729549-48729635)
chr7 (205-240)||(21358657-21358692)
chr7 (253-311)||(32168940-32168998)
chr7 (202-276)||(39229953-39230027)
chr7 (266-304)||(40893513-40893551)
chr7 (269-335)||(44072787-44072853)
chr7 (261-313)||(7884658-7884709)
chr7 (295-335)||(21358734-21358774)
chr7 (223-319)||(39698930-39699026)
[»] scaffold0343 (1 HSPs)
scaffold0343 (113-304)||(9203-9401)
[»] chr2 (80 HSPs)
chr2 (196-301)||(16669113-16669218)
chr2 (200-358)||(15250170-15250335)
chr2 (200-339)||(24019951-24020090)
chr2 (140-359)||(34884815-34885035)
chr2 (140-319)||(4385482-4385661)
chr2 (140-311)||(5039780-5039951)
chr2 (178-319)||(2758874-2759015)
chr2 (200-350)||(4055955-4056112)
chr2 (140-311)||(31616351-31616522)
chr2 (140-314)||(6760566-6760740)
chr2 (139-279)||(39167755-39167895)
chr2 (140-279)||(650777-650916)
chr2 (140-279)||(3377397-3377536)
chr2 (140-279)||(4453520-4453659)
chr2 (140-279)||(9886997-9887136)
chr2 (140-279)||(16486887-16487026)
chr2 (140-279)||(28382677-28382816)
chr2 (140-279)||(36712533-36712672)
chr2 (140-279)||(38579005-38579144)
chr2 (140-279)||(43507559-43507698)
chr2 (142-279)||(8815220-8815357)
chr2 (113-338)||(23356915-23357155)
chr2 (142-279)||(41322763-41322900)
chr2 (202-314)||(41796704-41796816)
chr2 (176-311)||(4038305-4038440)
chr2 (143-279)||(8688959-8689095)
chr2 (140-279)||(2546321-2546460)
chr2 (140-279)||(15521484-15521623)
chr2 (140-279)||(24402049-24402188)
chr2 (206-339)||(38842906-38843046)
chr2 (176-314)||(40869321-40869459)
chr2 (134-279)||(7400388-7400533)
chr2 (140-279)||(13111739-13111879)
chr2 (143-279)||(36999497-36999633)
chr2 (140-279)||(37356173-37356313)
chr2 (217-304)||(41877821-41877908)
chr2 (140-279)||(2266149-2266288)
chr2 (234-328)||(6807492-6807586)
chr2 (140-279)||(10393032-10393171)
chr2 (140-279)||(17263750-17263889)
chr2 (174-319)||(29514872-29515024)
chr2 (175-335)||(5520002-5520169)
chr2 (202-311)||(43135684-43135793)
chr2 (140-279)||(21865251-21865391)
chr2 (140-279)||(40024939-40025078)
chr2 (194-335)||(7823481-7823629)
chr2 (201-313)||(25071436-25071555)
chr2 (174-311)||(43285657-43285794)
chr2 (176-279)||(6232277-6232380)
chr2 (176-279)||(38880779-38880882)
chr2 (140-279)||(10839577-10839716)
chr2 (207-304)||(6222611-6222708)
chr2 (219-339)||(13761842-13761960)
chr2 (202-279)||(26911578-26911655)
chr2 (202-319)||(42132734-42132851)
chr2 (178-279)||(44275705-44275806)
chr2 (175-279)||(598931-599035)
chr2 (208-278)||(9053128-9053198)
chr2 (231-311)||(13351569-13351649)
chr2 (202-273)||(7213664-7213735)
chr2 (200-311)||(37674484-37674595)
chr2 (234-320)||(3337166-3337252)
chr2 (178-279)||(8070617-8070718)
chr2 (222-311)||(18710257-18710346)
chr2 (206-337)||(2221460-2221598)
chr2 (223-311)||(6153427-6153515)
chr2 (142-279)||(13527901-13528038)
chr2 (142-238)||(18212127-18212223)
chr2 (203-319)||(10727898-10728021)
chr2 (113-155)||(24019846-24019888)
chr2 (206-279)||(2047318-2047391)
chr2 (113-154)||(13761750-13761791)
chr2 (202-319)||(33850081-33850198)
chr2 (268-339)||(2757312-2757383)
chr2 (202-279)||(8340046-8340123)
chr2 (235-311)||(12738544-12738620)
chr2 (222-277)||(7569853-7569908)
chr2 (194-287)||(2689059-2689151)
chr2 (200-273)||(26411311-26411384)
chr2 (194-279)||(39675078-39675163)
[»] scaffold0016 (2 HSPs)
scaffold0016 (175-304)||(84298-84427)
scaffold0016 (202-279)||(93386-93463)
[»] scaffold0087 (1 HSPs)
scaffold0087 (174-311)||(52989-53126)
[»] scaffold0002 (2 HSPs)
scaffold0002 (178-279)||(119239-119340)
scaffold0002 (139-279)||(431264-431404)
[»] scaffold1632 (1 HSPs)
scaffold1632 (140-279)||(37-176)
[»] scaffold0116 (1 HSPs)
scaffold0116 (140-279)||(22602-22741)
[»] scaffold0031 (1 HSPs)
scaffold0031 (140-279)||(126760-126899)
[»] scaffold0362 (1 HSPs)
scaffold0362 (175-311)||(5451-5586)
[»] scaffold0041 (1 HSPs)
scaffold0041 (118-279)||(72765-72927)
[»] scaffold0197 (2 HSPs)
scaffold0197 (175-311)||(30145-30281)
scaffold0197 (216-279)||(28076-28139)
[»] scaffold0418 (1 HSPs)
scaffold0418 (203-314)||(4562-4673)
[»] scaffold0246 (1 HSPs)
scaffold0246 (176-279)||(7100-7203)
[»] scaffold0122 (1 HSPs)
scaffold0122 (140-279)||(12717-12856)
[»] scaffold0011 (1 HSPs)
scaffold0011 (176-279)||(63887-63990)
[»] scaffold0009 (1 HSPs)
scaffold0009 (140-279)||(192020-192159)
[»] scaffold0076 (1 HSPs)
scaffold0076 (194-271)||(10824-10901)
[»] scaffold0075 (1 HSPs)
scaffold0075 (140-251)||(27162-27274)
[»] scaffold0347 (1 HSPs)
scaffold0347 (261-321)||(11850-11910)
[»] scaffold1360 (1 HSPs)
scaffold1360 (266-339)||(1178-1251)
[»] scaffold0027 (1 HSPs)
scaffold0027 (222-279)||(41765-41822)
[»] scaffold0598 (1 HSPs)
scaffold0598 (174-258)||(8984-9067)
[»] scaffold0043 (1 HSPs)
scaffold0043 (200-324)||(59134-59257)
[»] scaffold0050 (1 HSPs)
scaffold0050 (273-306)||(32580-32613)
[»] scaffold0012 (1 HSPs)
scaffold0012 (113-166)||(50373-50426)


Alignment Details
Target: chr6 (Bit Score: 213; Significance: 1e-116; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 200 - 506
Target Start/End: Original strand, 21894319 - 21894637
Alignment:
Q  200 acgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagct-------tatagcttatcatcttttcttcc 292  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||  |||||||||       |||||||||||||||||||||||    
T  21894319 acgagattatagcttatttcacgagcttataagctatttttcagacgctattccaagtagcgtttgagcttatagcttatagcttatcatcttttcttcc 21894418  T
Q  293 atttttacccttatcattttaattaaaactcacttttaccctttatatattaaaacacatttattacattttctatgttttccctctatacttttttgtt 392  Q
    |||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  21894419 atttttacgcttatcattttaattaaaacccactcttaccctttatatattaaaacacatttattacgttttctatgttttccctctatatttttttgtt 21894518  T
Q  393 cctacgtttccagttcctatatacttccaatttagtacaactcaac--------tactcttcaaataaataaataaaactactcgagcatattttttgag 484  Q
    ||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||   ||||||||||||||||||||||||||    
T  21894519 cctacgtttccagttcctatatacttccaatttagtacaactcaactactcgagtactcttcaaataaata---aaaactactcgagcatattttttgag 21894615  T
Q  485 catatttttcatatattcatct 506  Q
    ||||||||||||||||||||||    
T  21894616 catatttttcatatattcatct 21894637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 113 - 338
Target Start/End: Original strand, 23648174 - 23648399
Alignment:
Q  113 gggtctgtttggtaagctcactaaatgagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagc 212  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||       |||||||||||||| | |   |||| |||||||||||||    
T  23648174 gggtctgtttggtaagcccattaaatgagcttatagcttataagcttgtttgacaaaaaaagctctgtttggtaatgctctcttaccacgagcttatagc 23648273  T
Q  213 ttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcatttt 312  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||   | |||||||||||||| | ||||||| |||||||||||||||||| |||||    
T  23648274 ttatttcacgagcttataagctatttttcagaagctatttcaagtagcttctgagcttatagctttttatcttttgttccatttttacccttattatttt 23648373  T
Q  313 aattaaaactcacttttaccctttat 338  Q
    || ||||| |||  ||||||||||||    
T  23648374 aactaaaagtcaaatttaccctttat 23648399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 140 - 311
Target Start/End: Complemental strand, 31100154 - 31099983
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  31100154 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 31100055  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||| |||||| ||||||  ||||||||||||||||| |||  |||||||||| |||||||||||| ||||    
T  31100054 tcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 31099983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 178 - 335
Target Start/End: Complemental strand, 15591252 - 15591088
Alignment:
Q  178 tgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagctt 277  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||  ||||||||||||| |||    
T  15591252 tgtttgataacggttttttacaacgagcttatagcttatttcacgagcttataaactatttttcagaagctacttcaagtagcgtttgagcttataactt 15591153  T
Q  278 a-------tcatcttttcttccatttttacccttatcattttaattaaaactcacttttaccctt 335  Q
    |       |||  |||  ||||| |||||||||||| |||||||||||||  |||||||||||||    
T  15591152 atagcgtgtcacttttaattccaattttacccttattattttaattaaaatccacttttaccctt 15591088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 140 - 311
Target Start/End: Complemental strand, 34233054 - 34232876
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  34233054 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 34232955  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagctta-------tcatcttttcttccatttttacccttatcattt 311  Q
    ||||| |||||||||||||  ||||||||||||||||||       |||| |||||||||| |||||||||||| ||||    
T  34232954 tcagaagctatttcaagtagcgtttgagcttatagcttatagcttctcattttttcttccaattttacccttattattt 34232876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 174 - 304
Target Start/End: Complemental strand, 6104776 - 6104646
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    |||||||||||||| |||  || || |||||||||||||||||||| ||||||||||| ||||||||||||  ||||||||||||  |||||||||||||    
T  6104776 gctctgtttggtaatggtctttcaccacgagcttatagcttatttcgcgagcttataagctatttttcagatactatttcaagtagcgtttgagcttata 6104677  T
Q  274 gcttatcatcttttcttccatttttaccctt 304  Q
    ||||||||| ||||||| ||| |||||||||    
T  6104676 gcttatcattttttctttcatctttaccctt 6104646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 140 - 311
Target Start/End: Original strand, 10856140 - 10856311
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  10856140 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 10856239  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||| |||||| ||||||  ||||||||||||||||| |||  |||||||  | |||||||||||| ||||    
T  10856240 tcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttttaattttacccttattattt 10856311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 120 - 338
Target Start/End: Original strand, 20563380 - 20563606
Alignment:
Q  120 tttggtaagctcactaaatgagcttatagcttataagcttgtttgacnnnnnnn-gctctgtttggtaacggttgtttacaacgagcttatagcttattt 218  Q
    |||||||||  || ||||||||||||||| ||||||||||||||||         |||||||||| ||| | |   |||| |||||||||||||||||||    
T  20563380 tttggtaagtccattaaatgagcttatagtttataagcttgtttgataaaaaaaagctctgtttgataatgctctcttaccacgagcttatagcttattt 20563479  T
Q  219 cacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc-------ttatcatcttttcttccatttttacccttatcattt 311  Q
    |||||||||||||||||||||||||| |||||||||||||   | ||||||||||||       || | ||||||| |||||||||||||||||| ||||    
T  20563480 cacgagcttataaactatttttcagaagctatttcaagtagcatctgagcttatagcttttagttttttatcttttgttccatttttacccttattattt 20563579  T
Q  312 taattaaaactcacttttaccctttat 338  Q
    ||| ||||| |||  ||||||||||||    
T  20563580 taactaaaagtcatatttaccctttat 20563606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 2442432 - 2442571
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  2442432 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 2442531  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  2442532 tcagaagctattccaagtagcgtttgagcttatagcttat 2442571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 12297372 - 12297511
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  12297372 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 12297471  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  12297472 tcagaagctattccaagtagcgtttgagcttatagcttat 12297511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 311
Target Start/End: Complemental strand, 31452093 - 31451923
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| || ||||    
T  31452093 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctgtttt 31451994  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||| |||||| ||||||  ||||||||||| ||||| |||  |||||||||| |||||||||||| ||||    
T  31451993 tcagaagctattccaagtagtgtttgagctta-agcttctcactttttcttccaattttacccttattattt 31451923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 194 - 322
Target Start/End: Original strand, 26561411 - 26561539
Alignment:
Q  194 tttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttcca 293  Q
    |||||||||||||||||| |||||||| ||||||||||  ||||||||| |||||||||||||||  |||||||||| |  |||||||  |||| ||  |    
T  26561411 tttacaacgagcttatagtttatttcaggagcttataacttatttttcaaacgctatttcaagtagcgtttgagcttttcacttatcactttttatttta 26561510  T
Q  294 tttttacccttatcattttaattaaaact 322  Q
    |||||||||||||||||||||||||||||    
T  26561511 tttttacccttatcattttaattaaaact 26561539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 20804997 - 20805136
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       | |||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  20804997 agcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 20805096  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  20805097 tcagaagctattccaagtagcgtttgagcttatagcttat 20805136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 32731766 - 32731905
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       | |||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  32731766 agcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 32731865  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  32731866 tcagaagctattccaagtagcgtttgagcttatagcttat 32731905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 113 - 279
Target Start/End: Complemental strand, 33540892 - 33540726
Alignment:
Q  113 gggtctgtttggtaagctcactaaatgagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagc 212  Q
    |||||||||||||||  ||   ||| |||||||||||||||||||| |||||||        ||||||||||||||  || || || |  ||||||||||    
T  33540892 gggtctgtttggtaacatccaaaaaagagcttatagcttataagctcgtttgacaaaaaaaactctgtttggtaacactttttcaccataagcttatagc 33540793  T
Q  213 ttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||||||||    
T  33540792 ttatttcacgagcttataatctatttttcagaagctattccaagtagcgtttgagcttatagcttat 33540726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 558367 - 558507
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnn-gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactattt 238  Q
    ||||||||||||||||||| |||||||        |||||||||||||||  || || || | |||||||||||||||||||||||||||||| ||||||    
T  558367 agcttatagcttataagctcgtttgacaaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctattt 558466  T
Q  239 ttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||| |||||| ||||||  |||||||||||||||||||    
T  558467 ttcagaagctattccaagtagcgtttgagcttatagcttat 558507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 139 - 279
Target Start/End: Complemental strand, 12432761 - 12432621
Alignment:
Q  139 gagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactattt 238  Q
    |||||||||||||||||||| |||||||        ||||||||||||||  || || || | |||||||||||||||||||||||||||||| ||||||    
T  12432761 gagcttatagcttataagctcgtttgacaaaaaaatctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctattt 12432662  T
Q  239 ttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||| || ||| ||||||  |||||||||||||||||||    
T  12432661 ttcagaagccattccaagtagcgtttgagcttatagcttat 12432621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 136 - 279
Target Start/End: Complemental strand, 5301745 - 5301602
Alignment:
Q  136 aatgagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaacta 235  Q
    ||||||||||||||||||||||| || ||||       | |||||||||||| | || || || | |||||||||||||||||||||||||||||| |||    
T  5301745 aatgagcttatagcttataagctcgtatgacaaaaaaagttctgtttggtaatgttttttcaccatgagcttatagcttatttcacgagcttataagcta 5301646  T
Q  236 tttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||| |||||| ||||||  |||| ||||||||||||||    
T  5301645 tttttcagaagctattccaagtagcgtttaagcttatagcttat 5301602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 202 - 339
Target Start/End: Complemental strand, 12140956 - 12140812
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc-------ttatcatcttttcttccat 294  Q
    |||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||  |||||| ||||||||       |||| ||||||| |||| |    
T  12140956 gagcttatagtttatttcacgagcttataagctatttttcagaagctatttcaagtagcgtttgaacttatagcttatagcttattatcttttgttcctt 12140857  T
Q  295 ttttacccttatcattttaattaaaactcacttttaccctttata 339  Q
    |||||||||||| ||||||| ||||| |||  |||||||||||||    
T  12140856 ttttacccttattattttaactaaaattcatatttaccctttata 12140812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 30811288 - 30811149
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||| | |||||||       ||||||||||||||   || || || | |||||||||||||||||||||||||||||| |||||||    
T  30811288 agcttatagcttataagttcgtttgacaaaaaaagctctgtttggtaatactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 30811189  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  30811188 tcagaagctattccaagtagcgtttgagcttatagcttat 30811149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 34685154 - 34685016
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||   | || |||  |||||||||||||||||||||||||||||| |||||||    
T  34685154 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacacattttcacat-gagcttatagcttatttcacgagcttataagctatttt 34685056  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  34685055 tcagaagctattccaagtagcgtttgagcttatagcttat 34685016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 203 - 297
Target Start/End: Complemental strand, 5893970 - 5893876
Alignment:
Q  203 agcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttt 297  Q
    ||||| |||||||||| || |||||||||  |||||| ||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||    
T  5893970 agcttttagcttattttactagcttataacttattttccagacgctatttcaagtagcgtttgagcttatagcttatcatcttttattccatttt 5893876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 174 - 335
Target Start/End: Complemental strand, 7292654 - 7292486
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    |||||||||| ||||| || ||||||| |||||||||||||||||||  ||||||||| |||||||||| | |||| ||||||||  |||||||||||||    
T  7292654 gctctgtttgataacgcttttttacaatgagcttatagcttatttcagaagcttataagctatttttcataagctacttcaagtaacgtttgagcttata 7292555  T
Q  274 gctta-------tcatcttttcttccatttttacccttatcattttaattaaaactcacttttaccctt 335  Q
    |||||       |||  |||  ||||| |||||| ||||| |||||||||||||  |||||||||||||    
T  7292554 gcttatagcgtctcacttttaattccagttttactcttattattttaattaaaatccacttttaccctt 7292486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 14227674 - 14227536
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| ||||||        ||| |||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  14227674 agcttatagcttataagctcgtttga-taaaaaagctttgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 14227576  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  14227575 tcagaagctattccaagtagcgtttgagcttatagcttat 14227536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 28076430 - 28076569
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    |||||||||||||||| || || ||||       ||||||||||||||   || ||||| | |||||||||||||||||||||||||||||| |||||||    
T  28076430 agcttatagcttataaactcgtctgacaaaaaaagctctgtttggtaatacttttttaccatgagcttatagcttatttcacgagcttataagctatttt 28076529  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    | ||| |||||| ||||||  |||||||||||||||||||    
T  28076530 tgagaagctattccaagtagcgtttgagcttatagcttat 28076569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 5943061 - 5943138
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||||||||    
T  5943061 gagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagtgtttgagcttatagcttat 5943138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 7317716 - 7317611
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||||||| |||||| ||| ||  |||||||||||||    
T  7317716 gctctgtttggtaacattttttgaccatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaaatagcgtttgagcttata 7317617  T
Q  274 gcttat 279  Q
    ||||||    
T  7317616 gcttat 7317611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 140 - 306
Target Start/End: Original strand, 33453743 - 33453909
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||| ||||||| | |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  33453743 agcttatagtttataagttcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 33453842  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttat 306  Q
    ||||| | |||| ||||||  ||||||||||||||||| |||  |||  ||||| ||||||| ||||    
T  33453843 tcagaagttattccaagtagcgtttgagcttatagcttctcacttttaattccaattttaccgttat 33453909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 140 - 278
Target Start/End: Original strand, 34439690 - 34439828
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| || ||||        |||||||||||||   || || || | |||||||||||||||||||||||||||||| |||||||    
T  34439690 agcttatagcttataagctcgtctgacaaaaaaaactctgtttggtaatactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 34439789  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagctta 278  Q
    ||||| |||||| ||||||  ||||||||||||||||||    
T  34439790 tcagaagctattccaagtaacgtttgagcttatagctta 34439828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 180 - 279
Target Start/End: Original strand, 2970722 - 2970821
Alignment:
Q  180 tttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||  || ||||| | ||| |||||||||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||||||||    
T  2970722 tttggtaacacttttttaccatgagtttatagcttatttcacgagcttataatctatttttcagaagctattccaagtagcgtttgagcttatagcttat 2970821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 3108146 - 3108006
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagctta-tttcacgagcttataaactattt 238  Q
    ||||||||||||||||||| |||||||       ||||| |||||||||  || || || | ||||||||| |||| |||||||||||||||| ||||||    
T  3108146 agcttatagcttataagctcgtttgacaaaaaaagctctatttggtaacactttttcaccatgagcttataacttaatttcacgagcttataagctattt 3108047  T
Q  239 ttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||| |||||||||| ||  |||||||||||||||||||    
T  3108046 ttcagaagctatttcaaatagcgtttgagcttatagcttat 3108006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 176 - 279
Target Start/End: Complemental strand, 6709799 - 6709696
Alignment:
Q  176 tctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc 275  Q
    |||||||||||||  || || || | ||||||||||||||||||||||  ||||||||||||||||||| |||||| ||||||  |||||||||||||||    
T  6709799 tctgtttggtaacactttttcaccatgagcttatagcttatttcacgaaattataaactatttttcagaagctattccaagtagcgtttgagcttatagc 6709700  T
Q  276 ttat 279  Q
    ||||    
T  6709699 ttat 6709696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 5681561 - 5681666
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    ||||||||||| |||  || || || | |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||    
T  5681561 gctctgtttggcaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttata 5681660  T
Q  274 gcttat 279  Q
     |||||    
T  5681661 acttat 5681666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 140 - 251
Target Start/End: Complemental strand, 1806454 - 1806343
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||        ||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  1806454 agcttatagcttataagctcgtttgactaaaaaatctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 1806355  T
Q  240 tcagacgctatt 251  Q
    ||||| ||||||    
T  1806354 tcagaagctatt 1806343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 200 - 339
Target Start/End: Original strand, 9896773 - 9896917
Alignment:
Q  200 acgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttg-------agcttatagcttatcatcttttcttcc 292  Q
    |||||||||||| ||||||||| ||||||||| |||||||||||||| |||||||||||  |||||       ||||||||||||||||  |||| ||||    
T  9896773 acgagcttatagtttatttcacaagcttataagctatttttcagacgttatttcaagtagcgtttgagttaatagcttatagcttatca--tttttttcc 9896870  T
Q  293 atttttacccttatcattttaattaaaactcacttttaccctttata 339  Q
    | |||||||| |||  ||||| |||||| ||  ||||||||||||||    
T  9896871 aattttacccatattgttttatttaaaattcttttttaccctttata 9896917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 31049403 - 31049480
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||||||||||||| |||||||| ||| |||||| ||| ||  |||||||||||||||||||    
T  31049403 gagcttatagcttatttcacgagcttataagctatttttgagaagctattccaaatagtgtttgagcttatagcttat 31049480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 203 - 319
Target Start/End: Complemental strand, 3636717 - 3636601
Alignment:
Q  203 agcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttaccc 302  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||   ||||| |||||||||| |||  |||  ||| | ||||||||    
T  3636717 agcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcctttgaacttatagcttctcacttttaattctagttttaccc 3636618  T
Q  303 ttatcattttaattaaa 319  Q
    |||| ||| ||| ||||    
T  3636617 ttattattctaactaaa 3636601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 3832449 - 3832395
Alignment:
Q  112 tgggtctgtttggtaagctcactaaatgagcttatagcttataagcttgtttgac 166  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3832449 tgggtatgtttggtaagctcactaaatgagcttatagcttataagctcgtttgac 3832395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 11015597 - 11015736
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| || ||||        |||||||||||||   || || || | ||||||||| ||||||||||||||||| || |||||||    
T  11015597 agcttatagcttataagctcgtctgacaaaaaaaactctgtttggtaatactttttcaccatgagcttataacttatttcacgagcttacaagctatttt 11015696  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    | ||| ||||||  |||||  |||||||||||||||||||    
T  11015697 tgagaagctattctaagtagcgtttgagcttatagcttat 11015736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 29823175 - 29823036
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||| ||||  || || || | ||||| |||||||||||  |||||||||||  ||||||    
T  29823175 agcttatagcttataagctcgtttgacaaaaaaagctctgtttgataacattttttcaccatgagctaatagcttattttgcgagcttataagttatttt 29823076  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||| | ||||||  |||||  |||||||||||||||||||    
T  29823075 tcaaaagctattcaaagtagcgtttgagcttatagcttat 29823036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 197 - 279
Target Start/End: Complemental strand, 32563326 - 32563244
Alignment:
Q  197 acaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||| |||||||||  |||||||||  |||||||||||||||||||||| ||  ||||||| ||||| |||||    
T  32563326 acaacgagcttataacttatttcagaagcttataatttatttttcagacgctatttcaaatagtgtttgagattataacttat 32563244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 220 - 313
Target Start/End: Original strand, 11443033 - 11443133
Alignment:
Q  220 acgagcttataaactatttttcagacgctatttcaagtatagtttgagctta-------tagcttatcatcttttcttccatttttacccttatcatttt 312  Q
    |||||||||||| ||||||| ||||| ||||||||||||  |||||||||||       || |||||||||||||||||||||| || |||||| |||||    
T  11443033 acgagcttataacctattttccagactctatttcaagtagcgtttgagcttatatcttttaacttatcatcttttcttccatttatatccttattatttt 11443132  T
Q  313 a 313  Q
    |    
T  11443133 a 11443133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 223 - 279
Target Start/End: Complemental strand, 29414980 - 29414924
Alignment:
Q  223 agcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||| |||||||||||| |||||| ||||||  |||||||||||||||||||    
T  29414980 agcttataagctatttttcagaagctattccaagtagtgtttgagcttatagcttat 29414924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 223 - 279
Target Start/End: Original strand, 34904037 - 34904093
Alignment:
Q  223 agcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||| |||||||||||| |||||| ||||||  |||||||||||||||||||    
T  34904037 agcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 34904093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 19415351 - 19415426
Alignment:
Q  203 agcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagctta 278  Q
    |||||||||| | |||||||||||| |    |||||||||||||||||||||||||  ||||||| ||||||||||    
T  19415351 agcttatagcgtttttcacgagcttgttgcttatttttcagacgctatttcaagtagcgtttgagtttatagctta 19415426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 200 - 305
Target Start/End: Complemental strand, 15131465 - 15131360
Alignment:
Q  200 acgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccattttta 299  Q
    ||||||||||| ||||||| || | ||||||   |||||||||||||||||||||||||   ||| ||| ||||||||||| | |||| || ||  ||||    
T  15131465 acgagcttataacttattttactaacttatagcttatttttcagacgctatttcaagtagcatttaagcatatagcttatctttttttttttcaaattta 15131366  T
Q  300 ccctta 305  Q
    ||||||    
T  15131365 ccctta 15131360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 154
Target Start/End: Original strand, 22756521 - 22756562
Alignment:
Q  113 gggtctgtttggtaagctcactaaatgagcttatagcttata 154  Q
    ||||||||||||||||| |||||||||||||||||| |||||    
T  22756521 gggtctgtttggtaagcccactaaatgagcttatagtttata 22756562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 274
Target Start/End: Original strand, 1225501 - 1225573
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatag 274  Q
    |||||||||  ||||||||| || |||||| |||||||| ||| | |||||||||||  ||||||||||||||    
T  1225501 gagcttatattttatttcacaagtttataagctattttttagaagttatttcaagtagcgtttgagcttatag 1225573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 313
Target Start/End: Original strand, 22756562 - 22756609
Alignment:
Q  266 agcttatagcttatcatcttttcttccatttttacccttatcatttta 313  Q
    |||||||||  |||||||||||||||||||| ||||||||| ||||||    
T  22756562 agcttatagtctatcatcttttcttccatttatacccttattatttta 22756609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 197; Significance: 1e-107; HSPs: 74)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 113 - 443
Target Start/End: Original strand, 13969955 - 13970289
Alignment:
Q  113 gggtctgtttggtaagctcactaaatgagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagc 212  Q
    |||||||||||||||   ||  ||| |||||||||||||||||||| ||||||        |||||||||||||  |  | || || |||||||||||||    
T  13969955 gggtctgtttggtaaagccatcaaacgagcttatagcttataagctcgtttgatcaaaaaagctctgtttggtactgtcttttcaccacgagcttatagc 13970054  T
Q  213 ttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcatttt 312  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13970055 ttatttcacgagcttataagctatttttcagacgctattcgaagtagcgtttgagcttatagcttatcatattttcttccatttttacccttatcatttt 13970154  T
Q  313 aattaaaactcacttttaccctttatatattaaaacacatttattacattttctatgttttccctctatacttttttgttcctacgtttccagttcctat 412  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13970155 aattaaaacccacttttaccctttatatattaacacacatttattacgttttctatgttttccctctatatttttttgttcctacgtttccagttcctat 13970254  T
Q  413 atacttccaat----ttagtacaactcaactactc 443  Q
    |||||||||||    ||||||||||||||||||||    
T  13970255 atacttccaatttaattagtacaactcaactactc 13970289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 145 - 339
Target Start/End: Complemental strand, 39747073 - 39746879
Alignment:
Q  145 atagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcaga 244  Q
    |||||||||||||| |||||||       |||||||||||||| | || || || ||||||||||| |||||||||||||||||||| ||||||||||||    
T  39747073 atagcttataagctcgtttgaccaaaaaagctctgtttggtaatgttttttcaccacgagcttataacttatttcacgagcttataagctatttttcaga 39746974  T
Q  245 cgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaattaaaactcacttttaccctttata 339  Q
     |||||| ||||||  ||||||||||||||||||| || |||||||||| ||||||||||||  |||||  ||||| ||  ||||||||||||||    
T  39746973 tgctattccaagtagcgtttgagcttatagcttataattttttcttccaattttacccttattgttttatctaaaattcttttttaccctttata 39746879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 113 - 279
Target Start/End: Complemental strand, 43849373 - 43849207
Alignment:
Q  113 gggtctgtttggtaagctcactaaatgagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagc 212  Q
    ||||||||||||||||| || | |||||||||||| |||||||||| |||||||       |||||||||||||||  || |||||||||||||||||||    
T  43849373 gggtctgtttggtaagcccatttaatgagcttataacttataagctcgtttgacaaaaaaagctctgtttggtaacaattttttacaacgagcttatagc 43849274  T
Q  213 ttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||| | |||||||||| |||||||||||| |||||| ||||||  |||||||||||||||||||    
T  43849273 ttattttatgagcttataagctatttttcagatgctattacaagtagcgtttgagcttatagcttat 43849207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 139 - 311
Target Start/End: Complemental strand, 31688190 - 31688018
Alignment:
Q  139 gagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactattt 238  Q
    |||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| ||||||    
T  31688190 gagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctattt 31688091  T
Q  239 ttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    |||||| |||||| ||||||  ||||||||||||||||| |||  |||||||||| |||||||||||| ||||    
T  31688090 ttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 31688018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 113 - 339
Target Start/End: Complemental strand, 29189899 - 29189659
Alignment:
Q  113 gggtctgtttggtaagctcactaaatgagcttatagcttata-------agcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagc 205  Q
    ||||||||||||||||||||||||||||||||||||||||||       | || ||||||        ||||||||| ||||||||| ||||| ||||||    
T  29189899 gggtctgtttggtaagctcactaaatgagcttatagcttatagcttataaactcgtttgataagaaaagctctgtttagtaacggttttttactacgagc 29189800  T
Q  206 ttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgag-------cttatagcttatcatcttttcttccattttt 298  Q
    |||||||||||||||||||||||||   ||||||| ||| |||||| ||||||  |||||||       |||||||||| ||||||||||||||||||||    
T  29189799 ttatagcttatttcacgagcttatatgttatttttaagaagctattccaagtagcgtttgagcttacagcttatagcttctcatcttttcttccattttt 29189700  T
Q  299 acccttatcattttaattaaaactcacttttaccctttata 339  Q
    |||||||| ||||||  |||||  || |||||||| |||||    
T  29189699 acccttattattttatctaaaatccaattttacccattata 29189659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 140 - 311
Target Start/End: Complemental strand, 43276910 - 43276739
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| ||||||        |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  43276910 agcttatagcttataagctcgtttgataaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 43276811  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||| |||||| ||||||  ||||||||||||||||| |||  |||||||||| |||||||||||| ||||    
T  43276810 tcagaagctattccaagtaacgtttgagcttatagcttctcactttttcttccaattttacccttattattt 43276739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 113 - 304
Target Start/End: Original strand, 2855063 - 2855253
Alignment:
Q  113 gggtctgtttggtaagctcactaaatgagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagc 212  Q
    ||||||||||||||||| ||||||||||||||||| |||||||| | |||||||       | ||||||||| || | |   |||| |||||||||||||    
T  2855063 gggtctgtttggtaagcacactaaatgagcttataacttataagttcgtttgacaaaaaa-gttctgtttggcaatgatctcttaccacgagcttatagc 2855161  T
Q  213 ttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttaccctt 304  Q
    ||||||||||||||||||| |||||||||| | | |||||||||||  ||||||||||||||||||| || ||||| ||||| |||||||||    
T  2855162 ttatttcacgagcttataagctatttttcaaaagttatttcaagtagcgtttgagcttatagcttattattttttcctccatctttaccctt 2855253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 140 - 311
Target Start/End: Original strand, 41313382 - 41313553
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    |||||||||||||||| || |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  41313382 agcttatagcttataaactcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 41313481  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||| |||||| ||| ||  ||||||||||||||||| |||  |||||||||| |||||||||||| ||||    
T  41313482 tcagaagctattccaaatagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 41313553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 7378889 - 7378994
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    |||||||||||||||| || ||||||||||||||||||||||||||| |||||||||| |||||||||||| |||| ||||||||  |||||||||||||    
T  7378889 gctctgtttggtaacgcttttttacaacgagcttatagcttatttcatgagcttataagctatttttcagaagctacttcaagtagtgtttgagcttata 7378988  T
Q  274 gcttat 279  Q
    ||||||    
T  7378989 gcttat 7378994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 8270915 - 8271052
Alignment:
Q  142 cttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttc 241  Q
    ||||||||||||||||| |||||||       |||||||||||||||  || ||||| | |||||||||||||||||||||||||||||| |||||||||    
T  8270915 cttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacacttttttaccatgagcttatagcttatttcacgagcttataagctatttttc 8271014  T
Q  242 agacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||| |||||| ||||||  |||||||||||||||||||    
T  8271015 agaagctattccaagtagcgtttgagcttatagcttat 8271052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 176 - 311
Target Start/End: Complemental strand, 36112944 - 36112809
Alignment:
Q  176 tctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc 275  Q
    |||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||||    
T  36112944 tctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagc 36112845  T
Q  276 ttatcatcttttcttccatttttacccttatcattt 311  Q
    || |||  |||||||||| |||||||||||| ||||    
T  36112844 ttctcactttttcttccaattttacccttattattt 36112809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 140 - 311
Target Start/End: Complemental strand, 45141594 - 45141416
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  45141594 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 45141495  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagctta-------tcatcttttcttccatttttacccttatcattt 311  Q
    ||||| |||||| ||||||  ||||||||||||||||||       ||| ||||||||||| |||||||||||| ||||    
T  45141494 tcagaagctattccaagtagcgtttgagcttatagcttatagcttctcaccttttcttccaattttacccttattattt 45141416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 339
Target Start/End: Complemental strand, 3427760 - 3427561
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||| ||||||||| || ||||       |||||||||||||| | || || || | || ||||||||||||||||||||||||||| |||||||    
T  3427760 agcttataggttataagctcgtctgacaaaaaaagctctgtttggtaatgctttttcaccatgaccttatagcttatttcacgagcttataagctatttt 3427661  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaattaaaactcacttttaccctttata 339  Q
    | ||| |||||| ||||||  ||||||||||||||||| |||   |||||||||||||||||||||  ||||||  ||||| ||| ||||| ||||||||    
T  3427660 ttagaagctattccaagtagcgtttgagcttatagcttctcaatatttcttccatttttacccttaatattttatctaaaattcatttttatcctttata 3427561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 31581701 - 31581840
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  31581701 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 31581800  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  31581801 tcagaagctattccaagtagcgtttgagcttatagcttat 31581840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 36681586 - 36681447
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  36681586 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 36681487  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  36681486 tcagaagctattccaagtagcgtttgagcttatagcttat 36681447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 39702313 - 39702452
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  39702313 agcttatagcttataagctcgtttgacataaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 39702412  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  39702413 tcagaagctattccaagtagcgtttgagcttatagcttat 39702452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 44827456 - 44827317
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  44827456 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 44827357  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  44827356 tcagaagctattccaagtagcgtttgagcttatagcttat 44827317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 140 - 314
Target Start/End: Original strand, 9210993 - 9211167
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||| |||||||||       |||| ||||| ||||  || || || | ||||||||| ||||||||||||||||||||||||||||    
T  9210993 agcttatagcttataagtttgtttgacaaaaaaagctccgtttgataacactttttgaccatgagcttataacttatttcacgagcttataaactatttt 9211092  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaa 314  Q
    ||||| |||||  ||||||  ||||||||||||||||| |||| |||| |  ||||||||||||||||| |||||    
T  9211093 tcagaagctatcccaagtagcgtttgagcttatagcttctcattttttgtctcatttttacccttatcaatttaa 9211167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 140 - 277
Target Start/End: Original strand, 17081661 - 17081798
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  17081661 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 17081760  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagctt 277  Q
    ||||| |||||| ||||||  |||||||||||||||||    
T  17081761 tcagaagctattccaagtagcgtttgagcttatagctt 17081798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 28716673 - 28716810
Alignment:
Q  142 cttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttc 241  Q
    ||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||||    
T  28716673 cttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttttc 28716772  T
Q  242 agacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||| |||||| ||||||  |||||||||||||||||||    
T  28716773 agaagctattccaagtagcgtttgagcttatagcttat 28716810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 176 - 311
Target Start/End: Complemental strand, 1893944 - 1893809
Alignment:
Q  176 tctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc 275  Q
    |||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||   ||||||||||||||    
T  1893944 tctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcatttgagcttatagc 1893845  T
Q  276 ttatcatcttttcttccatttttacccttatcattt 311  Q
    || |||  |||||||||| |||||||||||| ||||    
T  1893844 ttctcactttttcttccaattttacccttattattt 1893809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 6338325 - 6338464
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| ||||||         ||||||||||||||  || ||||| | |||||||||||||||||||||||||||||| |||||||    
T  6338325 agcttatagcttataagctcgtttgataaaaaaaactctgtttggtaacacttttttaccatgagcttatagcttatttcacgagcttataagctatttt 6338424  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  6338425 tcagaagctattccaagtagcgtttgagcttatagcttat 6338464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 25023313 - 25023452
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  25023313 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 25023412  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    | ||| |||||| ||||||  |||||||||||||||||||    
T  25023413 ttagaagctattccaagtagcgtttgagcttatagcttat 25023452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 27781109 - 27781248
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  27781109 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 27781208  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| | |||| ||||||  |||||||||||||||||||    
T  27781209 tcagaagttattccaagtagcgtttgagcttatagcttat 27781248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 142 - 277
Target Start/End: Original strand, 28709316 - 28709451
Alignment:
Q  142 cttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttc 241  Q
    ||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||||    
T  28709316 cttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttttc 28709415  T
Q  242 agacgctatttcaagtatagtttgagcttatagctt 277  Q
    ||| |||||| ||||||  |||||||||||||||||    
T  28709416 agaagctattccaagtagcgtttgagcttatagctt 28709451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 31478083 - 31478222
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  31478083 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 31478182  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| | |||| ||||||  |||||||||||||||||||    
T  31478183 tcagaagttattccaagtagcgtttgagcttatagcttat 31478222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 32541230 - 32541369
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  32541230 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 32541329  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| | |||| ||||||  |||||||||||||||||||    
T  32541330 tcagaagttattccaagtagcgtttgagcttatagcttat 32541369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 143 - 279
Target Start/End: Complemental strand, 38171563 - 38171427
Alignment:
Q  143 ttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttca 242  Q
    |||||||||||||||| |||||||       |||||||||||||||  ||||| || | ||||||||||||||||||||||||||||||  | |||||||    
T  38171563 ttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacacttgttcaccatgagcttatagcttatttcacgagcttataagttgtttttca 38171464  T
Q  243 gacgctatttcaagtatagtttgagcttatagcttat 279  Q
    || |||||| ||||||  |||||||||||||||||||    
T  38171463 gaagctattccaagtagcgtttgagcttatagcttat 38171427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 17115545 - 17115684
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| ||||||        |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  17115545 agcttatagcttataagctcgtttgaaaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 17115644  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  ||||||||||||| |||||    
T  17115645 tcagaagctattccaagtagcgtttgagcttataacttat 17115684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 16422898 - 16422975
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||  |||||||||||||||||||    
T  16422898 gagcttatagcttatttcacgagcttataaactatttttcagaagctattccaagtagcgtttgagcttatagcttat 16422975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 41694011 - 41693906
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||    
T  41694011 gctctgtttggtaacattttttcaccatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttata 41693912  T
Q  274 gcttat 279  Q
    ||||||    
T  41693911 gcttat 41693906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 42142872 - 42142735
Alignment:
Q  142 cttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttc 241  Q
    ||||||||||||||||| |||||||        ||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||||    
T  42142872 cttatagcttataagctcgtttgacaaaaaaaactctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttttc 42142773  T
Q  242 agacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||| |||||| ||| ||  |||||||||||||||||||    
T  42142772 agaagctattccaaatagtgtttgagcttatagcttat 42142735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 136 - 335
Target Start/End: Complemental strand, 8436667 - 8436461
Alignment:
Q  136 aatgagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaacta 235  Q
    ||||||||||||||||||||||| ||||||         ||||||||| ||||| || |||||||||| |||||||||||||| | ||||||||||  ||    
T  8436667 aatgagcttatagcttataagctcgtttgataaaaaaaactctgtttgataacgattttttacaacgaacttatagcttattttatgagcttataagtta 8436568  T
Q  236 tttttcagacgctatttcaagtatagtttgagcttatagc-------ttatcatcttttcttccatttttacccttatcattttaattaaaactcacttt 328  Q
    ||||||||| |||||| ||| ||| |||||| ||||||||       ||||||| |||| |||||||| |||||||| || ||||| |||||| ||  ||    
T  8436567 tttttcagatgctattacaaatatcgtttgaacttatagcttatagcttatcatgttttattccatttatacccttaccactttaactaaaacccatgtt 8436468  T
Q  329 taccctt 335  Q
    |||||||    
T  8436467 taccctt 8436461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 10618813 - 10618952
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| ||||||        | | |||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  10618813 agcttatagcttataagctcgtttgataaaaaaagttttgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 10618912  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  10618913 tcagaagctattccaagtagcgtttgagcttatagcttat 10618952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 116 - 279
Target Start/End: Original strand, 38780644 - 38780807
Alignment:
Q  116 tctgtttggtaagctcactaaatgagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagctta 215  Q
    |||||||||||||  |||  ||| ||||||||||||||||||| ||||||        | ||||||||  || | || || || |||| |||||| ||||    
T  38780644 tctgtttggtaagaccacacaattagcttatagcttataagctcgtttgataaaaaaagttctgtttgacaatgatttttcaccacgaacttataactta 38780743  T
Q  216 tttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||| |||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  38780744 ttttacgagcttataaactatttttcagacgctattccaagtagcgtttgagcttatagcttat 38780807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 2642495 - 2642418
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||||||||    
T  2642495 gagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 2642418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 202 - 319
Target Start/End: Original strand, 32099606 - 32099723
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacc 301  Q
    |||||||||||||||||||||||||||||| |||||||||||| | |||| ||||||  ||||||||||||||||| |||  |||  ||||| |||||||    
T  32099606 gagcttatagcttatttcacgagcttataagctatttttcagaagttattccaagtagcgtttgagcttatagcttctcacttttaattccagttttacc 32099705  T
Q  302 cttatcattttaattaaa 319  Q
    ||||| ||| ||| ||||    
T  32099706 cttattattctaactaaa 32099723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 39871272 - 39871410
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       ||||| |||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  39871272 agcttatagcttataagctcgtttgacaaaaaa-gctctatttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 39871370  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||   ||||||||||||||||||    
T  39871371 tcagaagctattccaagtagcatttgagcttatagcttat 39871410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 22878062 - 22877925
Alignment:
Q  142 cttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttc 241  Q
    ||||||||||||||||| |||||||       |||||||||||||||  || || || | || ||||||||||||||||||||||||||| |||||||||    
T  22878062 cttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgaacttatagcttatttcacgagcttataagctatttttc 22877963  T
Q  242 agacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||| ||||||   ||||  |||||||||||||||||||    
T  22877962 agaagctattctcagtagcgtttgagcttatagcttat 22877925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 35243431 - 35243352
Alignment:
Q  200 acgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||||| ||||||||||||||||||||  |||||||||||||||||| ||||||  |||||||||||||||||||    
T  35243431 acgagcttatatcttatttcacgagcttataagttatttttcagacgctattccaagtagcgtttgagcttatagcttat 35243352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 205 - 279
Target Start/End: Complemental strand, 37560603 - 37560529
Alignment:
Q  205 cttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||||||||    
T  37560603 cttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 37560529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 39320205 - 39320066
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||  | |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  39320205 agcttatagcttataaattcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 39320106  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  ||| ||||||||| |||||    
T  39320105 tcagaagctattccaagtagcgttcgagcttataacttat 39320066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 40223222 - 40223084
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnn--gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatt 237  Q
    |||||||||||||||||||||||||||         |||||||||||||||  ||  | || | |||||||||||||||||||||||||||||| |||||    
T  40223222 agcttatagcttataagcttgtttgacaaaaaaaaagctctgtttggtaacactt--tcaccatgagcttatagcttatttcacgagcttataa-ctatt 40223126  T
Q  238 tttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||| |||||| ||||||  |||||||||||||||||||    
T  40223125 tttcagaagctattccaagtagcgtttgagcttatagcttat 40223084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 136 - 279
Target Start/End: Original strand, 44157200 - 44157343
Alignment:
Q  136 aatgagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaacta 235  Q
    ||||||||||||||||||||||| || ||||         ||||||||||||   || || || | |||||||||||||||||||||||||||||| |||    
T  44157200 aatgagcttatagcttataagctcgtctgacaaaaaaaattctgtttggtaatactttttcaccatgagcttatagcttatttcacgagcttataagcta 44157299  T
Q  236 tttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| ||| |||||| ||||||  |||||||||||||||||||    
T  44157300 tttttgagaagctattccaagtagcgtttgagcttatagcttat 44157343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 3511287 - 3511364
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||  |||||| ||||||||||||    
T  3511287 gagcttgtagcttatttcacgagcttataagctatttttcagaagctatttcaagtagcgtttgaacttatagcttat 3511364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 11741180 - 11741103
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||||||||||||| ||||||||||||  ||||| ||||||  |||||||||||||||||||    
T  11741180 gagcttatagcttatttcacgagcttataagctatttttcagaatctattccaagtagcgtttgagcttatagcttat 11741103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 23676941 - 23677018
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||||| ||||||| |||||||||||| |||||| ||||||  |||||||||||||||||||    
T  23676941 gagcttatagcttatttcacgaacttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 23677018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 202 - 314
Target Start/End: Complemental strand, 34395424 - 34395311
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaacta-tttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttac 300  Q
    |||||||||||||||||||||||||||||| ||| ||||||||| ||||||  |||||  |||||| |||||||||| |||| |||| |  |||||||||    
T  34395424 gagcttatagcttatttcacgagcttataagctattttttcagaagctattcaaagtagcgtttgaacttatagcttctcattttttgtctcatttttac 34395325  T
Q  301 ccttatcattttaa 314  Q
    |||||||| |||||    
T  34395324 ccttatcaatttaa 34395311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 145 - 346
Target Start/End: Complemental strand, 1363926 - 1363725
Alignment:
Q  145 atagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcaga 244  Q
    ||||||||||||||||||||||         ||||||||||||   || ||||| | ||||||||| ||||||||||||| |||||| ||||| ||||||    
T  1363926 atagcttataagcttgtttgactaaaaaatttctgtttggtaatatttttttaccatgagcttataacttatttcacgagtttataagctattattcaga 1363827  T
Q  245 cgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaattaaaactcacttttaccctttatatatta 344  Q
    |||||||  |||||  |||||| ||||||||||| ||| ||||||| |  ||||| |||||| ||||||  |||||  || ||||| ||||| || ||||    
T  1363826 cgctattctaagtagcgtttgaacttatagcttaacattttttctttccattttatccttattattttatctaaaatacatttttatcctttttaaatta 1363727  T
Q  345 aa 346  Q
    ||    
T  1363726 aa 1363725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 24652277 - 24652413
Alignment:
Q  142 cttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttc 241  Q
    ||||||||||||||||| |||||||       | |||||||||||||  || || || | |||||||||||||||||||||||||||||| | ||||||     
T  24652277 cttatagcttataagctcgtttgacaaagaaagttctgtttggtaacactt-ttcaccatgagcttatagcttatttcacgagcttataagccatttttt 24652375  T
Q  242 agacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||| |||||||||||||   ||||||||||||||||||    
T  24652376 agaagctatttcaagtagcatttgagcttatagcttat 24652413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 176 - 279
Target Start/End: Original strand, 36590180 - 36590282
Alignment:
Q  176 tctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc 275  Q
    |||||||||||||  || ||||| | ||||||||| |||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||| ||||    
T  36590180 tctgtttggtaacacttttttaccatgagcttataacttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagctt-tagc 36590278  T
Q  276 ttat 279  Q
    ||||    
T  36590279 ttat 36590282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 11298180 - 11298041
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||        ||||||||||||||  || || |  |  |||||||||||||||||||||||||||||  ||||||    
T  11298180 agcttatagcttataagctcgtttgacaaaaaaaactctgtttggtaacattttttcatcatcagcttatagcttatttcacgagcttataagatatttt 11298081  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||| ||  |||||||||||||||||||    
T  11298080 tcagaagctattccaaataacgtttgagcttatagcttat 11298041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 176 - 300
Target Start/End: Complemental strand, 37587821 - 37587697
Alignment:
Q  176 tctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc 275  Q
    |||||||||||||  || || || | ||||||||||||||||||||||||||||||  ||||||||||| | |||| ||||||  |||||||||| ||||    
T  37587821 tctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagttatttttcagaagttattccaagtagcgtttgagcttttagc 37587722  T
Q  276 ttatcatcttttcttccatttttac 300  Q
    || |||  ||||||| || ||||||    
T  37587721 ttctcactttttctttcaattttac 37587697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 219 - 311
Target Start/End: Complemental strand, 42203463 - 42203371
Alignment:
Q  219 cacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||||||||||| |||||||||||| ||||||  |||||  ||||||||||||||||| |||  |||||||||| |||||||||||| ||||    
T  42203463 cacgagcttataagctatttttcagaagctattctaagtagcgtttgagcttatagcttctcacattttcttccaattttacccttattattt 42203371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 234 - 311
Target Start/End: Complemental strand, 2732390 - 2732313
Alignment:
Q  234 tatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||||||||||| ||||||||||   |||||| |||||| ||||||||||||| |||||||||||||||||| ||||    
T  2732390 tatttttcagacgttatttcaagtggtgtttgaacttatatcttatcatcttttattccatttttacccttattattt 2732313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 218 - 279
Target Start/End: Original strand, 13888326 - 13888387
Alignment:
Q  218 tcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||||||||||||||||| ||||||  |||| ||||||||||||||    
T  13888326 tcacgagcttataaactatttttcagacgctattccaagtagcgtttaagcttatagcttat 13888387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 9370396 - 9370316
Alignment:
Q  200 acgagcttatagctt-atttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||||| ||| ||||||||||||||||| |||||||||| | | |||||||||||  |||||||||||||||||||    
T  9370396 acgagcttataactttatttcacgagcttataagctatttttcaaaagttatttcaagtagcgtttgagcttatagcttat 9370316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 219 - 313
Target Start/End: Original strand, 39677442 - 39677543
Alignment:
Q  219 cacgagcttataaactatttttcagacgctatttcaagtatagtttgagct-------tatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||||||||||| |||||||||| | |||||| ||||||  |||||||||       ||||||||||||||||||||||||||| ||||||||| ||||    
T  39677442 cacgagcttataagctatttttcaaaagctattccaagtagtgtttgagcttatagcttatagcttatcatcttttcttccatttatacccttattattt 39677541  T
Q  312 ta 313  Q
    ||    
T  39677542 ta 39677543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 177 - 279
Target Start/End: Original strand, 40045444 - 40045546
Alignment:
Q  177 ctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaact-atttttcagacgctatttcaagtatagtttgagcttatagc 275  Q
    |||||||||||| ||| || |  | ||||||||||||| ||| || ||||||||| || ||||||||||||||||||||||||  |||||||||||||||    
T  40045444 ctgtttggtaactgtttttcatcaagagcttatagctttttt-actagcttataagcttatttttcagacgctatttcaagtagcgtttgagcttatagc 40045542  T
Q  276 ttat 279  Q
    ||||    
T  40045543 ttat 40045546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 234 - 320
Target Start/End: Complemental strand, 37801175 - 37801089
Alignment:
Q  234 tatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaattaaaa 320  Q
    ||||||||| |||||||| |||| |  |||||| |||||| ||||||||||||| |||||||| ||||||||| ||||||| |||||    
T  37801175 tatttttcatacgctattacaagcagtgtttgaacttataacttatcatcttttattccatttctacccttattattttaactaaaa 37801089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 214 - 279
Target Start/End: Original strand, 44263388 - 44263453
Alignment:
Q  214 tatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||| |||||||||| |||||||||||| |||| ||||||||  |||||||||||||||||||    
T  44263388 tatttcaggagcttataagctatttttcagaagctacttcaagtagcgtttgagcttatagcttat 44263453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 22957378 - 22957455
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||| |||||||||  ||||||||||| ||||||  |||||  ||||||| |||||| ||||    
T  22957378 gagcttatagcttatttcacaagcttataagttatttttcagaagctattctaagtagtgtttgagtttatagtttat 22957455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 194 - 267
Target Start/End: Original strand, 26293828 - 26293901
Alignment:
Q  194 tttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgag 267  Q
    |||||||| ||||||||||||||||||| |  |||||| ||||||||||||| ||||| ||||||  |||||||    
T  26293828 tttacaacaagcttatagcttatttcacaaatttataagctatttttcagacactattccaagtagcgtttgag 26293901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 194 - 267
Target Start/End: Original strand, 26307085 - 26307158
Alignment:
Q  194 tttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgag 267  Q
    |||||||| ||||||||||||||||||| |  |||||| ||||||||||||| ||||| ||||||  |||||||    
T  26307085 tttacaacaagcttatagcttatttcacaaatttataagctatttttcagacactattccaagtagcgtttgag 26307158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 154
Target Start/End: Original strand, 39677349 - 39677390
Alignment:
Q  113 gggtctgtttggtaagctcactaaatgagcttatagcttata 154  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  39677349 gggtctgtttggtaagcccactaaatgagcttatagcttata 39677390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 219 - 274
Target Start/End: Original strand, 44318316 - 44318371
Alignment:
Q  219 cacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatag 274  Q
    ||||||||||||| |||||||||||||| |||||||||||   |||||||||||||    
T  44318316 cacgagcttataagctatttttcagacgttatttcaagtagcatttgagcttatag 44318371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 206 - 279
Target Start/End: Original strand, 40551882 - 40551954
Alignment:
Q  206 ttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||||||||| |||||||||  |||||||||||| |||||||||  ||  |||||||||||||| ||||    
T  40551882 ttatagcttatttcatgagcttatag-ctatttttcagaagctatttcagatagcgtttgagcttatagtttat 40551954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 215
Target Start/End: Original strand, 44263065 - 44263105
Alignment:
Q  175 ctctgtttggtaacggttgtttacaacgagcttatagctta 215  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  44263065 ctctgtttggtaacgcttttttacaacgagcttatagctta 44263105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 339
Target Start/End: Original strand, 18410891 - 18411030
Alignment:
Q  200 acgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccattttta 299  Q
    |||||||||||  | ||||||||||||||||   |||||| || | |||||||||| |    ||||| |||||| ||||| || |||| ||  | || ||    
T  18410891 acgagcttatatttaatttcacgagcttatagcttattttccatatgctatttcaaatggcatttgaccttataacttataattttttattttacttcta 18410990  T
Q  300 cccttatcattttaattaaaactcacttttaccctttata 339  Q
    |||||| |||||||| |||||||||  |||||||||||||    
T  18410991 cccttaccattttaactaaaactcatgtttaccctttata 18411030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 338
Target Start/End: Original strand, 14171677 - 14171767
Alignment:
Q  248 tatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaattaaaactcacttttaccctttat 338  Q
    ||||| |||||  |||||||||||||||||||||| |||| ||| ||||||| | |||| ||||||  |||||  || ||| |||||||||    
T  14171677 tattttaagtagcgtttgagcttatagcttatcattttttattctatttttatctttattattttatctaaaatccattttcaccctttat 14171767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 289 - 329
Target Start/End: Complemental strand, 5320520 - 5320480
Alignment:
Q  289 ttccatttttacccttatcattttaattaaaactcactttt 329  Q
    |||||||||||||||||| ||||||| |||||| |||||||    
T  5320520 ttccatttttacccttattattttaactaaaacccactttt 5320480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 7117805 - 7117753
Alignment:
Q  268 cttatagcttatcatcttttcttccatttttacccttatcattttaattaaaa 320  Q
    |||||||||||||| ||||||||| |  ||||||||||| ||||||| |||||    
T  7117805 cttatagcttatcaccttttcttctacctttacccttattattttaactaaaa 7117753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 207 - 339
Target Start/End: Original strand, 14649211 - 14649338
Alignment:
Q  207 tatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttat 306  Q
    |||| |||||||  ||||||||||   || |||| ||||| |||||||| ||  |||||| |||||||||||| ||||||| ||| |||||     ||||    
T  14649211 tataacttattttgcgagcttatagcttagtttttagacgttatttcaaatagcgtttgaacttatagcttattatcttttgttctatttt-----ttat 14649305  T
Q  307 cattttaattaaaactcacttttaccctttata 339  Q
     ||||||||||||| |||  |||| ||||||||    
T  14649306 tattttaattaaaattcatatttatcctttata 14649338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 41123769 - 41123817
Alignment:
Q  234 tatttttcagacgctatttcaagtatagtttgagcttatagcttatcat 282  Q
    |||||||||||||||||||||| ||   |||||||||||| ||||||||    
T  41123769 tatttttcagacgctatttcaaatagcatttgagcttataacttatcat 41123817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 163; Significance: 8e-87; HSPs: 113)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 219 - 443
Target Start/End: Complemental strand, 24954282 - 24954050
Alignment:
Q  219 cacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat-------catcttttcttccatttttacccttatcattt 311  Q
    ||||||||||||| ||||||||||||||||||| ||||||  |||||||||||||||||||       |||||||| |||||||||||||||||||||||    
T  24954282 cacgagcttataagctatttttcagacgctattccaagtagcgtttgagcttatagcttatagcttatcatcttttgttccatttttacccttatcattt 24954183  T
Q  312 taattaaaactcacttttaccctttatatattaaaacacatttattacattttctatgttttccctctatacttttttgttcctacgtttcc-agttcct 410  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||| |||||||    
T  24954182 taattaaaacccacttttaccctttatatattaaaacacatttattacgttttctatgttttccctctatatttttttgttcctgcgtttccaagttcct 24954083  T
Q  411 atatacttccaatttagtacaactcaactactc 443  Q
    |||||||||||||||||||||||||||||||||    
T  24954082 atatacttccaatttagtacaactcaactactc 24954050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 113 - 313
Target Start/End: Original strand, 20511386 - 20511586
Alignment:
Q  113 gggtctgtttggtaagctcactaaatgagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagc 212  Q
    |||||||||||||||| || |||||||||||||||||||||||| | || ||||        ||||||||| |||| ||| |||||||||||||||||||    
T  20511386 gggtctgtttggtaaggtccctaaatgagcttatagcttataagttcgtctgaccaaaaacactctgtttgataacagttttttacaacgagcttatagc 20511485  T
Q  213 ttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcatttt 312  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||  ||||||||||||| |||||||||||||||||||||| ||||||||| |||||    
T  20511486 ttatttcatgagcttataagctatttttcagacgctattccaagtagcgtttgagcttataacttatcatcttttcttccatttatacccttattatttt 20511585  T
Q  313 a 313  Q
    |    
T  20511586 a 20511586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 178 - 339
Target Start/End: Complemental strand, 4465573 - 4465412
Alignment:
Q  178 tgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagctt 277  Q
    ||||||||||||  | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||  |||||||||| ||||||    
T  4465573 tgtttggtaacgtctttttacaatgagcttatagcttatttcacgagcttataaactatttttcagacgctgttccaagtagcgtttgagcttgtagctt 4465474  T
Q  278 atcatcttttcttccatttttacccttatcattttaattaaaactcacttttaccctttata 339  Q
    ||||||||||||||||  ||||||||||| ||||||| |||||| ||  |||||||||||||    
T  4465473 atcatcttttcttccacctttacccttattattttaaataaaacccatatttaccctttata 4465412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 113 - 339
Target Start/End: Complemental strand, 41864248 - 41864021
Alignment:
Q  113 gggtctgtttggtaagctcactaaatgagcttatagcttataagcttgtttgacnnnnnnng-ctctgtttggtaacggttgtttacaacgagcttatag 211  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||         ||||||||| |||||||| |||||||||  | |||||    
T  41864248 gggtctgtttggtaagctcactaaatgagcttataacttataagctcgtttgacaaaaaaaaactctgtttgataacggttttttacaacggacctatag 41864149  T
Q  212 cttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||||| |||| ||||||| |||||||| ||| |||||| ||| ||  |||| || ||||||||| |||||||||||||||||||||||||||| ||||    
T  41864148 cttattttacgaacttataagctatttttaagaagctattccaaatagcgtttaagtttatagcttctcatcttttcttccatttttacccttattattt 41864049  T
Q  312 taattaaaactcacttttaccctttata 339  Q
    ||  |||||  || |||||||| |||||    
T  41864048 tatctaaaatccaattttacccattata 41864021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 140 - 313
Target Start/End: Original strand, 36196878 - 36197051
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||| ||||||||| |||||||       |||||||||| |||  ||   |||| ||||||||||||||||||||||||||||||||||||||||    
T  36196878 agcttatagtttataagctcgtttgacaaaaatagctctgtttgataattgtctcttaccacgagcttatagcttatttcacgagcttataaactatttt 36196977  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcatttta 313  Q
    ||||| ||||||  |||||  |||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  36196978 tcagaagctattctaagtagtgtttgagcttatagcttatcatcttttcttccatttatacccttattatttta 36197051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 140 - 311
Target Start/End: Complemental strand, 55496020 - 55495849
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  55496020 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 55495921  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||| |||||| ||||||  ||||||||||||||||| |||  |||||||||| |||||||||||| ||||    
T  55495920 tcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 55495849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 112 - 335
Target Start/End: Complemental strand, 30563016 - 30562794
Alignment:
Q  112 tgggtctgtttggtaagctcactaaatgagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatag 211  Q
    ||||||| |||||||||| ||   ||||||||||||||||||||||| |||||||       | | |||||||||||| || |||||||||| ||||||     
T  30563016 tgggtctctttggtaagcccatctaatgagcttatagcttataagctcgtttgacaaaaaaagttatgtttggtaacgattttttacaacgaacttataa 30562917  T
Q  212 cttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||||| | ||||  |||| |||||||||||| |||||| ||||||  |||| ||||||||||||||||| |||| |||||||| |||||||| || ||    
T  30562916 cttattttatgagca-ataagctatttttcagatgctattacaagtagcgtttaagcttatagcttatcatgttttattccatttatacccttaccactt 30562818  T
Q  312 taattaaaactcacttttaccctt 335  Q
    ||| |||||||||  |||||||||    
T  30562817 taactaaaactcatgtttaccctt 30562794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 140 - 311
Target Start/End: Original strand, 31678973 - 31679144
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  31678973 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 31679072  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||| | |||||| ||||||  ||||||||||||||||| |||  |||||||||| |||||||||||| ||||    
T  31679073 tcaaaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 31679144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 180 - 306
Target Start/End: Complemental strand, 32101835 - 32101709
Alignment:
Q  180 tttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||| | ||||| |||| ||||||  |||||||||||||||||||    
T  32101835 tttggtaacggtcttttaccacgagcttataacttatttcacgagcttataaactatttctaagacgttattccaagtagcgtttgagcttatagcttat 32101736  T
Q  280 catcttttcttccatttttacccttat 306  Q
     ||||||||||||| ||||||||||||    
T  32101735 tatcttttcttccaattttacccttat 32101709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 176 - 306
Target Start/End: Original strand, 37047069 - 37047199
Alignment:
Q  176 tctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc 275  Q
    |||||||| ||||| || ||||||||||||||||||||||||| | |||||||||| |||||||||||| |||| ||||| ||  |||||||||||||||    
T  37047069 tctgtttgataacgcttttttacaacgagcttatagcttattttaggagcttataagctatttttcagaagctacttcaaatagcgtttgagcttatagc 37047168  T
Q  276 ttatcatcttttcttccatttttacccttat 306  Q
    ||||||| |||||||||||||||| ||||||    
T  37047169 ttatcatattttcttccatttttatccttat 37047199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 113 - 304
Target Start/End: Complemental strand, 20148971 - 20148778
Alignment:
Q  113 gggtctgtttggtaagctcactaaatgagcttatagcttataagcttgtttgacnnnnnnn--gctctgtttggtaacggttgtttacaacgagcttata 210  Q
    ||||||||||||||||| |||||||||| ||||||  ||||||| | ||||||          |||||||||||||| |||   || | | |||||||||    
T  20148971 gggtctgtttggtaagcccactaaatgaacttataatttataagttcgtttgataaaaaaaaagctctgtttggtaatggtctcttgccatgagcttata 20148872  T
Q  211 gcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttaccctt 304  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||  ||||||||||||| |||||||| ||||||||||| |||||||||    
T  20148871 gcttatttcacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttataacttatcattttttcttccatctttaccctt 20148778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 140 - 314
Target Start/End: Complemental strand, 35581085 - 35580911
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||| | |||| ||       |||||||||||||||  || || || | |||||||||| |||||||||||||||||||||||||||    
T  35581085 agcttatagcttataagttcgtttcacaaaaaaagctctgtttggtaacactttttgaccatgagcttatagtttatttcacgagcttataaactatttt 35580986  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaa 314  Q
    ||||| |||||||||||||  ||||||||||||||||| |||| |||| |  ||||||||||||||||| |||||    
T  35580985 tcagaggctatttcaagtagcgtttgagcttatagcttctcattttttgtctcatttttacccttatcaatttaa 35580911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 140 - 314
Target Start/End: Original strand, 55829008 - 55829182
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||| ||       |||||||||||||||  || || || | ||||||||| ||||||||||||||||||||||||||||    
T  55829008 agcttatagcttataagctcgtttcacaaaaaaagctctgtttggtaacactttttgaccatgagcttataacttatttcacgagcttataaactatttt 55829107  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaa 314  Q
    ||||| |||||| ||||||  ||||||||||||||||| |||| |||| |  ||||||||||||||||| |||||    
T  55829108 tcagaagctattccaagtagcgtttgagcttatagcttctcattttttgtctcatttttacccttatcaatttaa 55829182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 139 - 311
Target Start/End: Original strand, 33114978 - 33115157
Alignment:
Q  139 gagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactattt 238  Q
    |||||| ||||||||||||| |||||||       |||||||||||||||  || |||||   |||||||||||||||||||||||||||||| ||||||    
T  33114978 gagcttttagcttataagctcgtttgacaaaaaaagctctgtttggtaacacttttttaccgtgagcttatagcttatttcacgagcttataagctattt 33115077  T
Q  239 ttcagacgctatttcaagtatagtttgagcttatagctta-------tcatcttttcttccatttttacccttatcattt 311  Q
    |||||| |||||||||||||| ||||||||||||||||||       ||| ||||||||||| |||||||||||| ||||    
T  33115078 ttcagaagctatttcaagtatcgtttgagcttatagcttatagcttctcaccttttcttccaattttacccttattattt 33115157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 177 - 301
Target Start/End: Complemental strand, 48056709 - 48056585
Alignment:
Q  177 ctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagct 276  Q
    ||||||||||||  || |||||||||| ||||||| ||||||||||| |||||||  |||||||||||||||||| ||||||  ||||||||||||||||    
T  48056709 ctgtttggtaacaattttttacaacgaacttatagtttatttcacgaacttataagttatttttcagacgctattccaagtagcgtttgagcttatagct 48056610  T
Q  277 tatcatcttttcttccatttttacc 301  Q
    ||||||||||| |||||||||||||    
T  48056609 tatcatcttttattccatttttacc 48056585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 180 - 335
Target Start/End: Original strand, 50502284 - 50502440
Alignment:
Q  180 tttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||  |||||||||||| | ||||    
T  50502284 tttggtaacggttttttacaacgagtttatagcttatttcacgagcttataagctatttttcagacgctattccaagtagtgtttgagcttatggattat 50502383  T
Q  280 catcttttcttccatttttacccttatca-ttttaattaaaactcacttttaccctt 335  Q
     |   ||||||||| || ||||||||| | |||| || ||||| |||||||||||||    
T  50502384 taatatttcttccacttctacccttattattttttatcaaaacccacttttaccctt 50502440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 140 - 304
Target Start/End: Complemental strand, 35777526 - 35777362
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  35777526 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 35777427  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttaccctt 304  Q
    ||||| |||||| ||||||  ||||||||||||| ||| |||  |||||||||| ||||||||||    
T  35777426 tcagaagctattccaagtagcgtttgagcttataccttctcactttttcttccaattttaccctt 35777362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 200 - 339
Target Start/End: Complemental strand, 42085802 - 42085663
Alignment:
Q  200 acgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccattttta 299  Q
    |||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||  |||||||||||||||||||||| ||||||| || |||||    
T  42085802 acgaacttatagcttatttcacgagcttataagctttttttcagacgctatttcaagtagcgtttgagcttatagcttatcattttttctttcaatttta 42085703  T
Q  300 cccttatcattttaattaaaactcacttttaccctttata 339  Q
    ||||||  ||||    ||||| ||| ||||||||||||||    
T  42085702 cccttaatatttattctaaaattcagttttaccctttata 42085663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 136 - 335
Target Start/End: Complemental strand, 52708142 - 52707937
Alignment:
Q  136 aatgagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaacta 235  Q
    ||||||||||||||||||||||| ||||||         ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  52708142 aatgagcttatagcttataagctcgtttgatagaaaaaactctgtttggtaacgattttttacaacgagcttatagcttatttcacgagcttataaacta 52708043  T
Q  236 tttttcagacgctatttcaagtatagtttgagcttatag-------cttatcatcttttcttccatttttacccttatcattttaattaaaactcacttt 328  Q
    ||||||||| | |||| |||||| |  ||||||||||||       |||||||| |||| |||||||| |||||||| || ||||| |||||| ||  ||    
T  52708042 tttttcagatgttattacaagta-acgttgagcttatagcttatatcttatcatgttttattccatttatacccttaccactttaactaaaacccatgtt 52707944  T
Q  329 taccctt 335  Q
    |||||||    
T  52707943 taccctt 52707937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 4391848 - 4391709
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    |||| |||||||||||||| || ||||       |||||||||||||||| || ||||||||||||||||||||||||||| |||||||||| |||||||    
T  4391848 agctgatagcttataagctcgtctgacaaaaaaagctctgtttggtaacgcttttttacaacgagcttatagcttatttcaggagcttataagctatttt 4391749  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||| ||||||||  |||||||||||||||||||    
T  4391748 tcagaagctacttcaagtagcgtttgagcttatagcttat 4391709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 113 - 339
Target Start/End: Original strand, 11050293 - 11050520
Alignment:
Q  113 gggtctgtttggtaagctcactaaatgagcttatagcttataagcttgtttgacnnnnnnn-gctctgtttggtaacggttgtttacaacgagcttatag 211  Q
    ||||||||||||||||    || ||||||||||||||||||||||| || ||||        |||||||||||||| | || || || | || |||||||    
T  11050293 gggtctgtttggtaagacatctcaatgagcttatagcttataagctcgtctgacaaaaaaaagctctgtttggtaatgctttttcaccatgaacttatag 11050392  T
Q  212 cttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||  ||||||||||||||||| |||   || ||||||||||||||||||  ||||    
T  11050393 cttatttcacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttatagcttctcaaaattccttccatttttacccttaatattt 11050492  T
Q  312 taattaaaactcacttttaccctttata 339  Q
    ||  |||||  || ||||| ||||||||    
T  11050493 tatctaaaatccatttttatcctttata 11050520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 140 - 311
Target Start/End: Complemental strand, 37115423 - 37115252
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    |||||||||| |||||||| |||||||       | |||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  37115423 agcttatagcatataagctcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 37115324  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||| |||||| ||||||  ||||||||||||||||| |||  |||||||||| |||||||||||| ||||    
T  37115323 tcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 37115252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 42116900 - 42117039
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  42116900 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 42116999  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||||||||||  |||||||||||||||||||    
T  42117000 tcagaagctatttcaagtagcgtttgagcttatagcttat 42117039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 25235183 - 25235288
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    |||||||||||||||| || ||||||||||||||||||||||||||| |||||||||| |||||||||||| |||| ||||||||  |||||||||||||    
T  25235183 gctctgtttggtaacgcttttttacaacgagcttatagcttatttcaggagcttataagctatttttcagaagctacttcaagtagcgtttgagcttata 25235282  T
Q  274 gcttat 279  Q
    ||||||    
T  25235283 gcttat 25235288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 194 - 319
Target Start/End: Original strand, 31435064 - 31435189
Alignment:
Q  194 tttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttcca 293  Q
    ||||||||||||||||||||||||||||||| ||||||  ||||||||| |||||||| ||||||  ||||||| ||||| ||||||||||||| |||||    
T  31435064 tttacaacgagcttatagcttatttcacgagtttataagttatttttcatacgctattccaagtagcgtttgaggttataacttatcatcttttattcca 31435163  T
Q  294 tttttacccttatcattttaattaaa 319  Q
    |||||||| |||| | ||||||||||    
T  31435164 tttttacctttattagtttaattaaa 31435189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 140 - 311
Target Start/End: Complemental strand, 43225818 - 43225646
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnn-gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactattt 238  Q
    ||||||||||||||||| |||||||||        |||||||||||||||  || || || | |||||||||||||||||||||||||||||| ||||||    
T  43225818 agcttatagcttataagtttgtttgacaaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctattt 43225719  T
Q  239 ttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    |||||| |||||| ||| ||  ||||||||||||||||| |||  |||||||||| |||||||||||| ||||    
T  43225718 ttcagaagctattccaaatagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 43225646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 8829955 - 8829816
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  8829955 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 8829856  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  8829855 tcagaagctattccaagtagcgtttgagcttatagcttat 8829816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 11152079 - 11151940
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  11152079 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 11151980  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  11151979 tcagaagctattccaagtagcgtttgagcttatagcttat 11151940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 311
Target Start/End: Original strand, 29663933 - 29664104
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||| ||||||||| |||||||    
T  29663933 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacaagcttataagctatttt 29664032  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||| |||||| || |||  ||||||||||||||||| |||  ||||| |||| |||||||||||| ||||    
T  29664033 tcagaagctattccaggtagcgtttgagcttatagcttctcactttttcatccaattttacccttattattt 29664104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 45906143 - 45906282
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  45906143 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 45906242  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  45906243 tcagaagctattccaagtagcgtttgagcttatagcttat 45906282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 52669998 - 52670137
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    |||||||||||||||||||||||||||        ||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  52669998 agcttatagcttataagcttgtttgacaaaaaaaactctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 52670097  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  52670098 tcagaagctattccaagtagcgtttgagcttatagcttat 52670137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 53407193 - 53407332
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  53407193 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 53407292  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  53407293 tcagaagctattccaagtagcgtttgagcttatagcttat 53407332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 12234105 - 12233968
Alignment:
Q  142 cttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttc 241  Q
    ||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||||    
T  12234105 cttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttttc 12234006  T
Q  242 agacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||| |||||| ||||||  |||||||||||||||||||    
T  12234005 agaagctattccaagtagcgtttgagcttatagcttat 12233968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 200 - 311
Target Start/End: Complemental strand, 33005188 - 33005077
Alignment:
Q  200 acgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccattttta 299  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| |||||| ||||||  ||||||||||||||||| |||  |||||||||| |||||    
T  33005188 acgagcttatagcttatttcacgagtttataagctatttttcagaagctattccaagtaacgtttgagcttatagcttctcactttttcttccaatttta 33005089  T
Q  300 cccttatcattt 311  Q
    ||||||| ||||    
T  33005088 cccttattattt 33005077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 3009715 - 3009854
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    |||||||||||||||| || |||||||       |||||||||||||||  || |||||   |||||||||||||||||||||||||||||| |||||||    
T  3009715 agcttatagcttataaactcgtttgacaaaaaaagctctgtttggtaacatttttttaccttgagcttatagcttatttcacgagcttataagctatttt 3009814  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  3009815 tcagaagctattccaagtagcgtttgagcttatagcttat 3009854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 7706376 - 7706515
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | ||| |||||||||||||||||||||||||| |||||||    
T  7706376 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagtttatagcttatttcacgagcttataagctatttt 7706475  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  7706476 tcagaagctattccaagtagcgtttgagcttatagcttat 7706515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 18582848 - 18582987
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | ||||||||| |||||||||||||||||||| |||||||    
T  18582848 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttataacttatttcacgagcttataagctatttt 18582947  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  18582948 tcagaagctattccaagtagcgtttgagcttatagcttat 18582987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 22892532 - 22892671
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||| ||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  22892532 agcttatagcttataagctcgtttcacaaaaaaagctctgtttggtaacactttttgaccatgagcttatagcttatttcacgagcttataagctatttt 22892631  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  22892632 tcagaagctattccaagtagcgtttgagcttatagcttat 22892671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 22944196 - 22944335
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||| ||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  22944196 agcttatagcttataagctcgtttcacaaaaaaagctctgtttggtaacactttttgaccatgagcttatagcttatttcacgagcttataagctatttt 22944295  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  22944296 tcagaagctattccaagtagcgtttgagcttatagcttat 22944335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 27397906 - 27397767
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  27397906 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 27397807  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||| | |||||| ||||||  |||||||||||||||||||    
T  27397806 tcataagctattccaagtagcgtttgagcttatagcttat 27397767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 35190756 - 35190617
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| || ||||        ||||||||||||||| || ||||||||||| || |||||||||||| |||||||||| |||||||    
T  35190756 agcttatagcttataagctcgtctgacaaaaaaaactctgtttggtaacgcttttttacaacgagtttgtagcttatttcaggagcttataagctatttt 35190657  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||| ||||||||  |||||||||||||||||||    
T  35190656 tcagaagctacttcaagtagcgtttgagcttatagcttat 35190617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 46895287 - 46895426
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       ||||||||||||||   || || || | |||||||||||||||||||||||||||||| |||||||    
T  46895287 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaatactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 46895386  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  46895387 tcagaagctattccaagtagcgtttgagcttatagcttat 46895426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 311
Target Start/End: Complemental strand, 47417615 - 47417444
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||| ||    
T  47417615 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatctt 47417516  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||| | |||||| |||| |  ||||||||||||| ||| |||  |||||||||| |||||||||||| ||||    
T  47417515 tcataagctattccaagcagcgtttgagcttataacttctcactttttcttccaattttacccttattattt 47417444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 56372439 - 56372578
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  56372439 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 56372538  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| |||| |  |||||||||||||||||||    
T  56372539 tcagaagctattccaagcagcgtttgagcttatagcttat 56372578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 195 - 339
Target Start/End: Complemental strand, 21633901 - 21633750
Alignment:
Q  195 ttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc-------ttatcatctttt 287  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||| |||||| ||| ||  |||||||||||||||       ||||||||||||    
T  21633901 ttaccacgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaaatagcgtttgagcttatagcttatagcttatcatctttt 21633802  T
Q  288 cttccatttttacccttatcattttaattaaaactcacttttaccctttata 339  Q
    ||||||||| ||||||||| ||||||  |||||  || |||||||| |||||    
T  21633801 cttccatttatacccttattattttatctaaaaaccaattttacccattata 21633750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 133 - 311
Target Start/End: Original strand, 37831919 - 37832096
Alignment:
Q  133 ctaaatgagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaa 232  Q
    |||||| ||||||||||||||||||| |||||||        ||||||||||||||  || ||||| | ||| ||||||||||||||||||||||||||     
T  37831919 ctaaattagcttatagcttataagctcgtttgacaaaaaaaactctgtttggtaacacttttttaccatgagtttatagcttatttcacgagcttataag 37832018  T
Q  233 ctatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    |||||||||||| |||||| ||||||  ||||||| |||||| || |||  ||||||||||  ||||||||||| ||||    
T  37832019 ctatttttcagaagctattccaagtagcgtttgaggttatagtttctcactttttcttcca-ctttacccttattattt 37832096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 113 - 279
Target Start/End: Complemental strand, 56270258 - 56270092
Alignment:
Q  113 gggtctgtttggtaagctcactaaatgagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagc 212  Q
    |||||||||||||||   ||  ||| |||||||||||||||||||| |||| ||        ||||||||||||||  || || || | |||||||||||    
T  56270258 gggtctgtttggtaaatccaaaaaaagagcttatagcttataagctcgtttcacaaaaaaaactctgtttggtaacattttttgaccatgagcttatagc 56270159  T
Q  213 ttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||  |||||||||| ||||||||    
T  56270158 ttatttcacgagcttataaactatttttcagaagctattccaagtagcgtttgagcttttagcttat 56270092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 4517329 - 4517192
Alignment:
Q  142 cttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttc 241  Q
    ||||||||||||||||| |||||||       |||||||||||||||   | || || | |||||||||||||||||||||||||||||| |||||||||    
T  4517329 cttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacaccttttcaccatgagcttatagcttatttcacgagcttataagctatttttc 4517230  T
Q  242 agacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||| |||||| ||||||  |||||||||||||||||||    
T  4517229 agaagctattccaagtagcgtttgagcttatagcttat 4517192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 8941910 - 8942047
Alignment:
Q  142 cttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttc 241  Q
    ||||||||||||||||| |||||||       |||||||||||||||  || || || | ||||||||||||||||| |||||||||||| |||||||||    
T  8941910 cttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattttacgagcttataagctatttttc 8942009  T
Q  242 agacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||| |||||| ||||||  |||||||||||||||||||    
T  8942010 agaagctattccaagtagcgtttgagcttatagcttat 8942047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 139 - 279
Target Start/End: Original strand, 26826524 - 26826664
Alignment:
Q  139 gagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactattt 238  Q
    |||||||||||||||||| |||||||||        ||||||||||||||  || || || | ||||||||| |||||||||||||||||||| ||||||    
T  26826524 gagcttatagcttataagtttgtttgacaaaaaaaactctgtttggtaacactttttcacgatgagcttataacttatttcacgagcttataagctattt 26826623  T
Q  239 ttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||| |||||| ||||||  |||||||||||||||||||    
T  26826624 ttcagaagctattccaagtagcgtttgagcttatagcttat 26826664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 43078276 - 43078197
Alignment:
Q  200 acgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||    
T  43078276 acgagcttataacttatttcacgagcttataaactatttttcagacgctatttcaagtagcatttgagcttatagcttat 43078197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 4939525 - 4939387
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||| ||||||||| |||||||       | |||||||||||||  || ||||| | |||||||||||||||||||||||||||||| |||||||    
T  4939525 agcttatagtttataagctcgtttgacaaaaaaagttctgtttggtaacactt-tttaccatgagcttatagcttatttcacgagcttataagctatttt 4939427  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  4939426 tcagaagctattccaagtagcgtttgagcttatagcttat 4939387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 11600687 - 11600826
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       ||| |||||||||||  || || || | |||||||||||||||||||| ||||||||| |||||||    
T  11600687 agcttatagcttataagctcgtttgacaaaaaaagctatgtttggtaacactttttcaccatgagcttatagcttatttcacaagcttataagctatttt 11600786  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  11600787 tcagaagctattccaagtagcgtttgagcttatagcttat 11600826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 19514022 - 19513883
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||| | |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  19514022 agcttatagcttataagttcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 19513923  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||| ||||||||||||||    
T  19513922 tcagaagctattccaagtagcgttttagcttatagcttat 19513883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 22038497 - 22038358
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||| ||||||||||  |||||||    
T  22038497 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttctcgagcttataggctatttt 22038398  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  22038397 tcagaagctattccaagtaacgtttgagcttatagcttat 22038358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 22430639 - 22430778
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| ||| ||        ||||| |||| ||| |||| || || |||||||||||||||||||||||||||||||| |||||||    
T  22430639 agcttatagcttataagctcgttcgataaaaaaagctctatttgataatggtttttcaccacgagcttatagcttatttcacgagcttataagctatttt 22430738  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  22430739 tcagatgctattccaagtagcgtttgagcttatagcttat 22430778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 23868009 - 23867870
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    |||||||||||||||||||  ||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  23868009 agcttatagcttataagctcttttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 23867910  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    | ||| |||||| ||||||  |||||||||||||||||||    
T  23867909 ttagaagctattccaagtagcgtttgagcttatagcttat 23867870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 28307259 - 28307398
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||| ||||| ||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  28307259 agcttatagcttataagctcgtttgacaaaaaaagctcggtttgataacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 28307358  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  28307359 tcagaagctattccaagtagcgtttgagcttatagcttat 28307398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 29413535 - 29413674
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       | |||||||||||||  || || || | || ||||||||||||||||||||||||||| |||||||    
T  29413535 agcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgaacttatagcttatttcacgagcttataagctatttt 29413634  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  29413635 tcagaagctattccaagtagcgtttgagcttatagcttat 29413674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 39087698 - 39087559
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | ||||||||||||||||||||||| |||||| |||||||    
T  39087698 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagtttataagctatttt 39087599  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| | |||| ||||||  |||||||||||||||||||    
T  39087598 tcagaagttattccaagtagcgtttgagcttatagcttat 39087559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 55684699 - 55684838
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    |||| |||||||||||||| || ||||       ||| |||||||||| | || |||||||||||||| |||||||||||| |||||||||| |||||||    
T  55684699 agctgatagcttataagctcgtctgacaaaaaaagctttgtttggtaatgcttttttacaacgagcttctagcttatttcaggagcttataagctatttt 55684798  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||| ||||||||  |||||||||||||||||||    
T  55684799 tcagaagctacttcaagtagcgtttgagcttatagcttat 55684838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 55856664 - 55856528
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||| ||||||||        |||||||||||||||  || ||||| | |||||||||||||||||||||||||||||| |||||||    
T  55856664 agcttatagcttataagtttgtttga---taaaagctctgtttggtaacacttttttaccatgagcttatagcttatttcacgagcttataagctatttt 55856568  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    | ||| |||||| ||||||  |||||||||||||||||||    
T  55856567 ttagaagctattccaagtagcgtttgagcttatagcttat 55856528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 5465516 - 5465411
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    ||||||||||||||   || ||||| | |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||    
T  5465516 gctctgtttggtaatacttttttaccatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttata 5465417  T
Q  274 gcttat 279  Q
    ||||||    
T  5465416 gcttat 5465411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 9032101 - 9031996
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||    
T  9032101 gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagtgtttgagcttata 9032002  T
Q  274 gcttat 279  Q
    ||||||    
T  9032001 gcttat 9031996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 55764597 - 55764702
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||    
T  55764597 gctctgtttggtaacactttttgaccatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttata 55764696  T
Q  274 gcttat 279  Q
    ||||||    
T  55764697 gcttat 55764702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 205 - 333
Target Start/End: Complemental strand, 8716993 - 8716865
Alignment:
Q  205 cttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttaccctt 304  Q
    ||||||||||||||||  ||||||||   |||||| |||| |||||||||||||  |||||||||||||| ||||||| ||||||||||||| |||||||    
T  8716993 cttatagcttatttcaaaagcttatagtttattttccagaggctatttcaagtagtgtttgagcttatagtttatcattttttcttccatttctaccctt 8716894  T
Q  305 atcattttaattaaaactcacttttaccc 333  Q
    || ||||||  ||||| ||| ||||||||    
T  8716893 attattttatctaaaattcatttttaccc 8716865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 146 - 279
Target Start/End: Original strand, 21369890 - 21370023
Alignment:
Q  146 tagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagac 245  Q
    ||||||||||||| |||||||       ||||||||||||||   || || || | |||||||||||||||||||||||||||||| ||||||||||||     
T  21369890 tagcttataagctcgtttgacaaaaaaagctctgtttggtaatactttttcaccatgagcttatagcttatttcacgagcttataagctatttttcagaa 21369989  T
Q  246 gctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||| ||||||  |||||||||||||||||||    
T  21369990 gctattccaagtagcgtttgagcttatagcttat 21370023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 176 - 279
Target Start/End: Complemental strand, 25440588 - 25440485
Alignment:
Q  176 tctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc 275  Q
    |||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||||    
T  25440588 tctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagc 25440489  T
Q  276 ttat 279  Q
    ||||    
T  25440488 ttat 25440485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 203 - 314
Target Start/End: Complemental strand, 40497473 - 40497362
Alignment:
Q  203 agcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttaccc 302  Q
    |||||||| |||||||||||||||||||| |||||||||||| | |||| ||||||  ||||||||||||||||| |||| |||| |  |||||||||||    
T  40497473 agcttataacttatttcacgagcttataagctatttttcagaagttattccaagtagcgtttgagcttatagcttctcattttttgtctcatttttaccc 40497374  T
Q  303 ttatcattttaa 314  Q
    |||||| |||||    
T  40497373 ttatcaatttaa 40497362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 174 - 302
Target Start/End: Original strand, 1031325 - 1031453
Alignment:
Q  174 gctctgtttggtaac-ggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttat 272  Q
    |||||||||||| || || | |||| |||||||||||||||||||| ||||| ||||||  |||||| ||||||||||||||  ||| |||||||||||     
T  1031325 gctctgtttggtcactggctttttataacgagcttatagcttattttacgagtttataacttatttt-cagacgctatttcagatattgtttgagcttac 1031423  T
Q  273 agcttatcatcttttcttccatttttaccc 302  Q
    ||||||||||||||||| | ||||||||||    
T  1031424 agcttatcatcttttctacaatttttaccc 1031453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 4355670 - 4355593
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||  ||||||||||||| |||||    
T  4355670 gagcttatagcttatttcacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttataacttat 4355593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 27185710 - 27185633
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||||||||    
T  27185710 gagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 27185633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 31338578 - 31338501
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||  |||||||||||||||||||    
T  31338578 gagcttatagcttatttcacgggcttataagctatttttcagaagctatttcaagtagcgtttgagcttatagcttat 31338501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 206 - 319
Target Start/End: Original strand, 44525707 - 44525820
Alignment:
Q  206 ttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttaccctta 305  Q
    |||||||||||||||||||||||||| ||||||||||||  ||||||||||||  ||||||||||||||||| |||  |||  ||||| |||||||||||    
T  44525707 ttatagcttatttcacgagcttataagctatttttcagaaactatttcaagtagcgtttgagcttatagcttctcacttttaattccaattttaccctta 44525806  T
Q  306 tcattttaattaaa 319  Q
    | ||| ||| ||||    
T  44525807 ttattctaactaaa 44525820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 175 - 279
Target Start/End: Original strand, 37970333 - 37970437
Alignment:
Q  175 ctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatag 274  Q
    ||||||||||||||  || || || | ||||||||||||||||||| |||||||||| |||||||||||| |||||| ||||||  ||||||||||||||    
T  37970333 ctctgtttggtaacactttttgaccatgagcttatagcttatttcatgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatag 37970432  T
Q  275 cttat 279  Q
    |||||    
T  37970433 cttat 37970437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 140 - 311
Target Start/End: Original strand, 15635946 - 15636124
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    |||||||||||||||| |||||||||        ||| |||||||||||  || || || | ||| ||||||||||||||||||||||||||||||||||    
T  15635946 agcttatagcttataaacttgtttgataaaaaaagctttgtttggtaacactttttcactatgagtttatagcttatttcacgagcttataaactatttt 15636045  T
Q  240 tcagacgctatttcaagtatagtttg-------agcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||| |||||| ||||||  |||||       |||||||||||| |||  |||||||||| |||||||||||| ||||    
T  15636046 tcagaagctattccaagtagcgtttgattttatagcttatagcttctcactttttcttccaattttacccttattattt 15636124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 4392865 - 4392727
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| ||||||        |||||||||||||||  || || || | |||||||||||||||||||||||||||||| ||| |||    
T  4392865 agcttatagcttataagctcgtttgataaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagcta-ttt 4392767  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||| | |||||| ||||||  |||||||||||||||||||    
T  4392766 tcataagctattccaagtagcgtttgagcttatagcttat 4392727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 202 - 339
Target Start/End: Complemental strand, 23113554 - 23113410
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgag-------cttatagcttatcatcttttcttccat 294  Q
    |||||||||||||||||||||||||||||| |||||||||||| | |||| ||||||  |||||||       |||||| ||| |||| |||| | ||||    
T  23113554 gagcttatagcttatttcacgagcttataagctatttttcagaagttattccaagtagcgtttgagtttataacttataacttctcatattttatcccat 23113455  T
Q  295 ttttacccttatcattttaattaaaactcacttttaccctttata 339  Q
    |||||||||||| |||||||||||||  ||  |||||||||||||    
T  23113454 ttttacccttattattttaattaaaatccatatttaccctttata 23113410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 205 - 311
Target Start/End: Original strand, 31953224 - 31953330
Alignment:
Q  205 cttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttaccctt 304  Q
    |||||||||||||||||||  ||||||||||||||| ||||  |||||||||||  ||||||||||||||||| |||  |||||||||| ||||||| ||    
T  31953224 cttatagcttatttcacgactttataaactattttttagacattatttcaagtagcgtttgagcttatagcttctcactttttcttccaattttaccttt 31953323  T
Q  305 atcattt 311  Q
    || ||||    
T  31953324 attattt 31953330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 30366224 - 30366147
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||  |||||  |||||||||||||||||||    
T  30366224 gagcttatatcttatttcacgagcttataaactatttttcagaagctattctaagtagcgtttgagcttatagcttat 30366147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 218 - 359
Target Start/End: Original strand, 31011003 - 31011143
Alignment:
Q  218 tcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaatta 317  Q
    |||||||||||||| |||| ||| | |  |||||  || ||| |||| |||||||| ||| |||| ||||||||||| ||||||||||||||||||||||    
T  31011003 tcacgagcttataagctatattttaaaatctattctaaatatcgtttaagcttataacttctcattttttcttccatatttacccttatcattttaatta 31011102  T
Q  318 aaactcacttttaccctttatatattaaaacacatttattac 359  Q
    |||||||  |||| || ||| |||||||||||| ||||||||    
T  31011103 aaactcagctttaacc-ttaaatattaaaacacctttattac 31011143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 55358416 - 55358339
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||| |||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||||||||    
T  55358416 gagcttataacttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 55358339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 51011142 - 51011066
Alignment:
Q  203 agcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||||||||||||| ||||||||| |||||||||||| |||||| ||||||  |||||||||||||||||||    
T  51011142 agcttatagcttatttcacaagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 51011066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 176 - 279
Target Start/End: Original strand, 44442122 - 44442224
Alignment:
Q  176 tctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc 275  Q
    |||||||||||||  || || || | |||||||| |||||| ||||||||||| ||||||||||||||| |||||||||||||  |||||||||||||||    
T  44442122 tctgtttggtaacactttttcaccatgagcttattgcttatctcacgagctta-aaactatttttcagaagctatttcaagtagcgtttgagcttatagc 44442220  T
Q  276 ttat 279  Q
    ||||    
T  44442221 ttat 44442224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 142 - 273
Target Start/End: Original strand, 35468021 - 35468152
Alignment:
Q  142 cttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttc 241  Q
    ||||||||||||||||| |||||||         |||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||||    
T  35468021 cttatagcttataagctcgtttgacaaaaaaaaatctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttttc 35468120  T
Q  242 agacgctatttcaagtatagtttgagcttata 273  Q
    ||| |||||| ||| ||  |||||||||||||    
T  35468121 agaagctattccaaatagcgtttgagcttata 35468152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 35822439 - 35822300
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    |||||||| |||||||||| |||||||        ||||||||||||||  || || || | ||||||| | ||||||||||||| |||||| |||||||    
T  35822439 agcttataacttataagctcgtttgacaaaaaaaactctgtttggtaacactttttcaccatgagcttacaacttatttcacgagattataagctatttt 35822340  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  35822339 tcagaagctattccaagtagcgtttgagcttatagcttat 35822300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 9043688 - 9043611
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||| |||||||||||||||||||| |||||||||||| |||||| ||| ||  |||||||||||||||||||    
T  9043688 gagcttataacttatttcacgagcttataagctatttttcagaagctattccaaatagcgtttgagcttatagcttat 9043611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 219 - 339
Target Start/End: Original strand, 17715647 - 17715767
Alignment:
Q  219 cacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaattaa 318  Q
    ||||||||||||| ||||||||||||||||||| ||||||  ||||||| |||||||||||  | |||||||||| |||| ||||||  | ||||  |||    
T  17715647 cacgagcttataagctatttttcagacgctattccaagtagcgtttgagattatagcttattgttttttcttccacttttgcccttactaatttatctaa 17715746  T
Q  319 aactcacttttaccctttata 339  Q
    ||  | |||||||||||||||    
T  17715747 aatccccttttaccctttata 17715767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 194 - 306
Target Start/End: Original strand, 39068884 - 39068996
Alignment:
Q  194 tttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttcca 293  Q
    ||||||| ||||||||| ||||||||| ||| ||||||  ||||||||||||| |||||||||||  |||||| |||||| |||||  | ||||| ||||    
T  39068884 tttacaatgagcttataacttatttcaggagtttataacttatttttcagacgatatttcaagtaacgtttgatcttataacttattgttttttcgtcca 39068983  T
Q  294 tttttacccttat 306  Q
     ||||||||||||    
T  39068984 cttttacccttat 39068996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 234 - 349
Target Start/End: Original strand, 2320099 - 2320214
Alignment:
Q  234 tatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaattaaaactcacttttaccc 333  Q
    ||||||||||||| || ||||| ||  |||||| |||||| |||||||  |||||||| ||||||| ||||||||||||||| ||||||||  ||||| |    
T  2320099 tatttttcagacgataattcaaatagcgtttgaccttataacttatcactttttcttcaatttttatccttatcattttaatcaaaactcatgtttactc 2320198  T
Q  334 tttatatattaaaaca 349  Q
    ||||||  ||||||||    
T  2320199 tttataatttaaaaca 2320214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 201 - 339
Target Start/End: Original strand, 52713559 - 52713704
Alignment:
Q  201 cgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat-------catcttttcttcca 293  Q
    |||||||||| |||||||||| | |||||||  ||||||| |||| |||||  |||||  |||||||||||||||||||       ||||||||||||||    
T  52713559 cgagcttataacttatttcacaaacttataagttatttttaagacactattctaagtagcgtttgagcttatagcttataacttctcatcttttcttcca 52713658  T
Q  294 tttttacccttatcattttaattaaaactcacttttaccctttata 339  Q
    ||||||||||||| ||||||  ||||| |||  ||||||| |||||    
T  52713659 tttttacccttattattttatctaaaattcaactttacccattata 52713704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 23162667 - 23162745
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttg-agcttatagcttat 279  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||   |||| ||||||||||||||    
T  23162667 gagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcttttgaagcttatagcttat 23162745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 33005268 - 33005178
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttata 230  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || ||||| | |||||||||||||||||||||||||||||    
T  33005268 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacacttttttaccatgagcttatagcttatttcacgagcttata 33005178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 222 - 311
Target Start/End: Complemental strand, 45780815 - 45780726
Alignment:
Q  222 gagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    |||||||||| |||||||||||| |||||| ||||||  ||||||||||||||||| |||  ||||||| || |||||||||||| ||||    
T  45780815 gagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttctttcaattttacccttattattt 45780726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 42124740 - 42124680
Alignment:
Q  219 cacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||| |||||||||||||| ||||||  |||||||||||||||||||    
T  42124740 cacgagcttataaactatctttcagacgctattccaagtagcgtttgagcttatagcttat 42124680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 38048957 - 38048854
Alignment:
Q  200 acgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccattttta 299  Q
    |||| ||||||  |||||||||||| |||||||||||||||||||||||||| ||| ||   |||||| |||||||||||||| | ||||| || ||||     
T  38048957 acgaacttataatttatttcacgagtttataaactatttttcagacgctattccaaatagcatttgagtttatagcttatcatttcttctttcaattttg 38048858  T
Q  300 ccct 303  Q
    ||||    
T  38048857 ccct 38048854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 219 - 305
Target Start/End: Original strand, 40119903 - 40119996
Alignment:
Q  219 cacgagcttataaactatttttcagacgctatttcaagtatagtttgagct-------tatagcttatcatcttttcttccatttttaccctta 305  Q
    ||||||||||||||||||||||||||||||||| ||||||   ||||||||       ||||||||||||| |||||||||| |||||||||||    
T  40119903 cacgagcttataaactatttttcagacgctattccaagtagcatttgagcttgtagcctatagcttatcatattttcttccacttttaccctta 40119996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 6902290 - 6902237
Alignment:
Q  113 gggtctgtttggtaagctcactaaatgagcttatagcttataagcttgtttgac 166  Q
    |||||||||||| |||| |||||||||||||||||||||||||||| |||||||    
T  6902290 gggtctgtttggcaagcccactaaatgagcttatagcttataagctcgtttgac 6902237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 175 - 279
Target Start/End: Original strand, 37337678 - 37337782
Alignment:
Q  175 ctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatag 274  Q
    |||||||||||||||||| |||| ||  ||| |||||||||||||| |  ||||||| |||||||||| | |||| ||||||||  |||||| |||||||    
T  37337678 ctctgtttggtaacggttttttataataagcatatagcttatttcaggtacttataagctatttttcataagctacttcaagtagcgtttgaacttatag 37337777  T
Q  275 cttat 279  Q
     ||||    
T  37337778 tttat 37337782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 140 - 256
Target Start/End: Original strand, 53273122 - 53273238
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       | ||| |||||||||  || || || | || |||||| |||||||||||||||||||| |||||||    
T  53273122 agcttatagcttataagctcgtttgacaaaaaaagttctatttggtaacactttttcaccatgaacttataacttatttcacgagcttataagctatttt 53273221  T
Q  240 tcagacgctatttcaag 256  Q
    ||||| |||||| ||||    
T  53273222 tcagaagctattccaag 53273238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 266 - 339
Target Start/End: Complemental strand, 3932256 - 3932183
Alignment:
Q  266 agcttatagcttatcatcttttcttccatttttacccttatcattttaattaaaactcacttttaccctttata 339  Q
    ||||||||||||||||| ||||||| ||||||||||||||| ||||||  |||||  || |||||||| |||||    
T  3932256 agcttatagcttatcatattttctttcatttttacccttattattttatctaaaatccaattttacccattata 3932183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 279
Target Start/End: Complemental strand, 36486459 - 36486386
Alignment:
Q  206 ttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||| |||||| | ||||||||||||||||||||| | ||||||| |||||  |||||| ||||||||||||    
T  36486459 ttatagtttattttatgagcttataaactatttttcataagctattttaagtaacgtttgaacttatagcttat 36486386  T

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Target: chr4; HSP #103
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 251
Target Start/End: Complemental strand, 29656833 - 29656722
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       | |||||||| ||||  || ||  | | ||||||||||||||||||||||||| ||||  ||||||    
T  29656833 agcttatagcttataagctcgtttgacagaaaaagttctgtttgttaacactttttcgccatgagcttatagcttatttcacgagctaataatttatttt 29656734  T
Q  240 tcagacgctatt 251  Q
    ||||| ||||||    
T  29656733 tcagaagctatt 29656722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 234 - 335
Target Start/End: Original strand, 12928952 - 12929053
Alignment:
Q  234 tatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaattaaaactcacttttaccc 333  Q
    |||||||||||| |||||| ||| |   |||||||||||| |||||||   ||||||||| || ||||||||| ||||| |  ||||| |||||||||||    
T  12928952 tatttttcagacactattttaagcaatatttgagcttataacttatcaatatttcttccacttctacccttattatttttagcaaaacccacttttaccc 12929051  T
Q  334 tt 335  Q
    ||    
T  12929052 tt 12929053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 220 - 340
Target Start/End: Original strand, 26443389 - 26443516
Alignment:
Q  220 acgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagctta-------tcatcttttcttccatttttacccttatcatttt 312  Q
    ||||||||||||||||||||||| | |||| ||||||||  |||| |||||||| ||||       |||  |||  ||||| ||||||| |||| |||||    
T  26443389 acgagcttataaactatttttcaaaagctacttcaagtaacgtttaagcttataacttacaacgtctcacttttaattccaattttacctttattatttt 26443488  T
Q  313 aattaaaactcacttttaccctttatat 340  Q
    ||||||||  ||||||||||||| ||||    
T  26443489 aattaaaatccacttttacccttaatat 26443516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 112 - 153
Target Start/End: Complemental strand, 30623417 - 30623376
Alignment:
Q  112 tgggtctgtttggtaagctcactaaatgagcttatagcttat 153  Q
    |||||||||||||||||| ||||||||||||||||| |||||    
T  30623417 tgggtctgtttggtaagcccactaaatgagcttataacttat 30623376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 218 - 319
Target Start/End: Original strand, 53224309 - 53224410
Alignment:
Q  218 tcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaatta 317  Q
    ||||||| |||||| |||||||||| | |||||| ||||||  ||||||||||||||||| |||  |||  |||||  ||||||||||| ||| ||| ||    
T  53224309 tcacgagtttataagctatttttcaaaagctattccaagtagcgtttgagcttatagcttctcacttttaattccagatttacccttattattctaacta 53224408  T
Q  318 aa 319  Q
    ||    
T  53224409 aa 53224410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 223 - 279
Target Start/End: Complemental strand, 49239276 - 49239220
Alignment:
Q  223 agcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||||||||||||  |||||  |||||| ||||||| ||||    
T  49239276 agcttataaactatttttcagacgctattataagtaacgtttgaacttatagtttat 49239220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 29656676 - 29656597
Alignment:
Q  142 cttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcac 221  Q
    |||||||||| |||||| |||||||       |||||||||||||||  || || || ||||||||||||||||||||||    
T  29656676 cttatagcttttaagctcgtttgacaagaaaagctctgtttggtaacactttttcaccacgagcttatagcttatttcac 29656597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #110
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 210
Target Start/End: Original strand, 17715588 - 17715658
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttata 210  Q
    ||||||||||||||||||| |||||||       |||||||||||||| |||| || || |||||||||||    
T  17715588 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaatggtttttcaccacgagcttata 17715658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #111
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 49545226 - 49545271
Alignment:
Q  113 gggtctgtttggtaagctcactaaatgagcttatagcttataagct 158  Q
    ||||||||||||||||  ||  ||||||||||||||||||||||||    
T  49545226 gggtctgtttggtaagaccagaaaatgagcttatagcttataagct 49545271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #112
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 154
Target Start/End: Complemental strand, 21633996 - 21633956
Alignment:
Q  114 ggtctgtttggtaagctcactaaatgagcttatagcttata 154  Q
    ||||||||||||||||  |||||||||| ||||||||||||    
T  21633996 ggtctgtttggtaagcctactaaatgagtttatagcttata 21633956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #113
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 223 - 279
Target Start/End: Complemental strand, 36008075 - 36008019
Alignment:
Q  223 agcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||| || ||||||||| |||||| ||||||  ||||||| |||||||||||    
T  36008075 agcttataagctgtttttcagaagctattccaagtagcgtttgagtttatagcttat 36008019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 161; Significance: 1e-85; HSPs: 98)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 140 - 506
Target Start/End: Complemental strand, 44947345 - 44946974
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| ||||||        |||||||||||||  |  | || || |||||||||||||||||||||||||||||||| |||||||    
T  44947345 agcttatagcttataagctcgtttgataaaaaaagctctgtttggtactgtcttttcaccacgagcttatagcttatttcacgagcttataagctatttt 44947246  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat-------catcttttcttccatttttacccttatcattttaattaaaactcacttttacc 332  Q
    ||||| |||||| |||| |  |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  44947245 tcagaagctattccaagcagtgtttgagcttatagcttatagcttatcatcttttcttccatttttacccttatcattttaattaaaacccacttttacc 44947146  T
Q  333 ctttatatattaaaacacatttattacattttctatgttttccctctatacttttttgttcctacgtttccagttcctatatacttccaat----ttagt 428  Q
    ||||||||||||||||||||||||||| ||||||||||             ||||||||||||||||||||||||||||||||||||||||    |||||    
T  44947145 ctttatatattaaaacacatttattacgttttctatgt-------------ttttttgttcctacgtttccagttcctatatacttccaatttaattagt 44947059  T
Q  429 acaactcaac--------tactcttcaaataaataaataaaactactcgagcatattttttgagcatatttttcatatattcatct 506  Q
    ||||||||||        ||||||||||||||| ||| |||| |||| ||||||||||||||||||||||||||||||||||||||    
T  44947058 acaactcaactactcgagtactcttcaaataaa-aaaaaaaattactagagcatattttttgagcatatttttcatatattcatct 44946974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 140 - 359
Target Start/End: Complemental strand, 37490068 - 37489850
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    |||| ||||||||||||||||||||||       ||||| |||| ||| | || |  || |||||||||||||||||||||||||||||||| |||||||    
T  37490068 agctgatagcttataagcttgtttgacaaaaaaagctctatttgttaaagattttccaccacgagcttatagcttatttcacgagcttataagctatttt 37489969  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaattaaaactcacttttaccctttata 339  Q
    |||||| ||||| ||||||  ||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||| ||  |||| |||||| |    
T  37489968 tcagacactattccaagtagcgtttgagcttatagcttctcattttttcttccattttaacccttatcattttaattaaaac-caactttaacctttaaa 37489870  T
Q  340 tattaaaacacatttattac 359  Q
    ||||||||||| ||||||||    
T  37489869 tattaaaacacctttattac 37489850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 140 - 335
Target Start/End: Original strand, 193405 - 193600
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || ||||||||||||||||||||||||| | |||||||||| |||||||    
T  193405 agcttatagcttataagctcgtttgacaaaaatagctctgtttggtaacaattttttacaacgagcttatagcttattttatgagcttataagctatttt 193504  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaattaaaactcacttttaccctt 335  Q
    ||||| |||||| ||||||  |||||||||||||||||||||| |||| |||||||| |||||||| || ||||| |||||| ||  |||||||||    
T  193505 tcagatgctattacaagtagcgtttgagcttatagcttatcatgttttattccatttatacccttaccactttaactaaaacccatgtttaccctt 193600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 113 - 306
Target Start/End: Complemental strand, 37713312 - 37713109
Alignment:
Q  113 gggtctgtttggtaagctcactaaatgagcttatagcttataagcttgtttgacnnnnnnngctctgtttg-gtaacggttgtttacaacgagcttatag 211  Q
    |||||| ||||||||||||||||||||||||||| |||||||| || |||||||       |||||||||| ||||||||| ||||||||||||||||||    
T  37713312 gggtctctttggtaagctcactaaatgagcttatggcttataaactcgtttgacaaaaaaagctctgtttgagtaacggttttttacaacgagcttatag 37713213  T
Q  212 cttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagct---------tatagcttatcatcttttcttccatttttaccc 302  Q
     |||||| ||||||||||||||||||||| ||| | ||||  |||||  |||||||||         |||||||| ||||||||||||||||||||||||    
T  37713212 tttattttacgagcttataaactatttttaagaagttattctaagtagcgtttgagcttatataacttatagcttctcatcttttcttccatttttaccc 37713113  T
Q  303 ttat 306  Q
    ||||    
T  37713112 ttat 37713109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 140 - 339
Target Start/End: Original strand, 42217671 - 42217870
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| ||||||        ||||||||||||||   || || || | |||||||||||||||||||||||||||||| |||||||    
T  42217671 agcttatagcttataagctcgtttgataaaaaaagctctgtttggtaatactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 42217770  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaattaaaactcacttttaccctttata 339  Q
    ||||| |||||| ||||||  ||||||||||||||||| |||| |||| |  ||||||||||||||| |||||||||||||  ||  |||||||||||||    
T  42217771 tcagaagctattccaagtaacgtttgagcttatagcttctcatattttatctcatttttacccttattattttaattaaaatccatgtttaccctttata 42217870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 140 - 311
Target Start/End: Complemental strand, 44748930 - 44748759
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    |||||||||||||||| ||||||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  44748930 agcttatagcttataaacttgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 44748831  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||| |||||| ||||||  ||||||||||||||||| |||  |||||||||| |||||||||||| ||||    
T  44748830 tcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 44748759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 140 - 311
Target Start/End: Complemental strand, 46248108 - 46247937
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  46248108 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 46248009  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||| |||||| ||||||  ||||||||||||||||| |||  |||||||||| |||||||||||| ||||    
T  46248008 tcagaagctattccaagtaacgtttgagcttatagcttctcactttttcttccaattttacccttattattt 46247937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 175 - 279
Target Start/End: Complemental strand, 29203136 - 29203032
Alignment:
Q  175 ctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatag 274  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||   |||||||||||||    
T  29203136 ctctgtttggtaacggttttttacaacgagcttatagtttatttcacgagcttataagctatttttcagacgctatttcaagtagcatttgagcttatag 29203037  T
Q  275 cttat 279  Q
    |||||    
T  29203036 cttat 29203032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 140 - 311
Target Start/End: Original strand, 8872881 - 8873052
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       ||| ||||||||||   || || || | |||||||||||||||||||||||||||||| |||||||    
T  8872881 agcttatagcttataagctcgtttgacaaaaaaagctatgtttggtaatactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 8872980  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||| |||||||||||||  ||||||||||||||||| |||  ||||||| || |||||||||||| ||||    
T  8872981 tcagaagctatttcaagtagcgtttgagcttatagcttctcactttttctttcaattttacccttattattt 8873052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 174 - 339
Target Start/End: Original strand, 20450500 - 20450672
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttg-------a 266  Q
    ||||||||||||||| ||| |||||||| || ||||| ||||||||||||||||||||  |||||||||||||||||| ||||||  |||||       |    
T  20450500 gctctgtttggtaacagttttttacaacaagtttataacttatttcacgagcttataagttatttttcagacgctattgcaagtagcgtttgtgcttata 20450599  T
Q  267 gcttatagcttatcatcttttcttccatttttacccttatcattttaattaaaactcacttttaccctttata 339  Q
     ||||||| |||||||||||| |||||||| ||||||||| ||||||||||||||| |  |||||||||||||    
T  20450600 acttatagtttatcatcttttattccatttctacccttattattttaattaaaacttatatttaccctttata 20450672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 140 - 339
Target Start/End: Original strand, 39719362 - 39719560
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||| ||||| || |||||||| |||||||||||||||||||||||||||||  |||| |    
T  39719362 agcttatagcttataagctcgtttgacaaaaaaagctctgtttgataacgttt-tttacaacaagcttatagcttatttcacgagcttataagttattat 39719460  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaattaaaactcacttttaccctttata 339  Q
      ||| |||||| ||| ||  ||||||| ||||||||| | |||||||||||||||||||||||||| ||||||  |||||  || |||||||| |||||    
T  39719461 gaagaagctattccaaatagcgtttgagtttatagctttttatcttttcttccatttttacccttattattttatctaaaatccaattttacccattata 39719560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 140 - 311
Target Start/End: Complemental strand, 40480165 - 40479994
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       | |||||||||||||  || || || | ||||||||||||||||| |||||||||||| |||||||    
T  40480165 agcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttattttacgagcttataagctatttt 40480066  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||| |||||| ||||||  ||||||||||||||||| |||  |||||||||| |||||||||||| ||||    
T  40480065 tcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 40479994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 140 - 311
Target Start/End: Original strand, 43525751 - 43525922
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    |||||||||||||||||||  ||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  43525751 agcttatagcttataagctcatttgacaaaaaaagctctgtttggtaacattttttcaccatgagcttatagcttatttcacgagcttataagctatttt 43525850  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||| |||||| ||||||  ||||||||||||||||| |||  |||||||||| ||||||| |||| ||||    
T  43525851 tcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacctttattattt 43525922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 176 - 311
Target Start/End: Original strand, 48943033 - 48943168
Alignment:
Q  176 tctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc 275  Q
    |||||||||||||  || ||||| | |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||||    
T  48943033 tctgtttggtaacacttttttaccatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagc 48943132  T
Q  276 ttatcatcttttcttccatttttacccttatcattt 311  Q
    || |||  |||||||||| ||||| |||||| ||||    
T  48943133 ttctcactttttcttccaattttatccttattattt 48943168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 16127283 - 16127144
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  16127283 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 16127184  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  16127183 tcagaagctattccaagtagcgtttgagcttatagcttat 16127144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 19948462 - 19948323
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||| ||||||||| |||||||       |||||||||||||||  || ||||| | |||||||||||||||||||||||||||||| |||||||    
T  19948462 agcttatagtttataagctcgtttgacaaaaaaagctctgtttggtaacacttttttaccatgagcttatagcttatttcacgagcttataagctatttt 19948363  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  19948362 tcagaagctattccaagtagcgtttgagcttatagcttat 19948323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 29081425 - 29081286
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  29081425 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 29081326  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  29081325 tcagaagctattccaagtagcgtttgagcttatagcttat 29081286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 37528867 - 37528728
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  37528867 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 37528768  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  37528767 tcagaagctattccaagtagcgtttgagcttatagcttat 37528728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 311
Target Start/End: Complemental strand, 37714109 - 37713938
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| ||||||        |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  37714109 agcttatagcttataagctcgtttgataaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 37714010  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||| | |||| ||||||  ||||||||||||||||| |||  ||||||| || |||||||||||| ||||    
T  37714009 tcagaagttattccaagtagcgtttgagcttatagcttctcactttttctttcaattttacccttattattt 37713938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 40563507 - 40563368
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  40563507 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 40563408  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  40563407 tcagaagctattccaagtagcgtttgagcttatagcttat 40563368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 44845632 - 44845771
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  44845632 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 44845731  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  44845732 tcagaagctattccaagtagcgtttgagcttatagcttat 44845771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 45368618 - 45368757
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    |||| |||||||||||||| || ||||       |||||||||||||||| || |||||||| |||||||||||||||||| |||||||||| |||||||    
T  45368618 agctgatagcttataagctcgtctgacaaaaaaagctctgtttggtaacgcttttttacaacaagcttatagcttatttcaggagcttataagctatttt 45368717  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||| ||||||||  |||||||||||||||||||    
T  45368718 tcagaagctacttcaagtagcgtttgagcttatagcttat 45368757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 174 - 337
Target Start/End: Complemental strand, 33898003 - 33897840
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    |||||||||||||| |  | || || |||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||| ||  |||||| ||||||    
T  33898003 gctctgtttggtaatgtcttttcaccacgagcttatagcttatttcacaagcttataagctatttttcagacgctattccaaatagcgtttgaacttata 33897904  T
Q  274 gcttatcatcttttcttccatttttacccttatcattttaattaaaactcacttttacccttta 337  Q
     |||||||| |||||||||  || ||||||||| ||||||  |||||  || ||||||||||||    
T  33897903 acttatcattttttcttcctattgtacccttattattttatctaaaatccatttttacccttta 33897840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 180 - 279
Target Start/End: Original strand, 41518409 - 41518508
Alignment:
Q  180 tttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||| || ||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||  |||||||||||||||||||    
T  41518409 tttggtaacgcttttttacaatgagcttatagcttatttcaagagcttataaactatttttcagaagctacttcaagtagcgtttgagcttatagcttat 41518508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 143 - 279
Target Start/End: Original strand, 52857907 - 52858043
Alignment:
Q  143 ttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttca 242  Q
    |||||||||||||||| |||| ||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| ||||||||||    
T  52857907 ttatagcttataagctcgttttacaaaaaaagctctgtttggtaacactttttgaccatgagcttatagcttatttcacgagcttataagctatttttca 52858006  T
Q  243 gacgctatttcaagtatagtttgagcttatagcttat 279  Q
    || |||||| ||||||| |||||||||||||||||||    
T  52858007 gaagctattccaagtatcgtttgagcttatagcttat 52858043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 24536698 - 24536559
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    |||||| |||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  24536698 agcttagagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 24536599  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  24536598 tcagaagctattccaagtagcgtttgagcttatagcttat 24536559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 26540968 - 26541107
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  26540968 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 26541067  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  ||||||||||| |||||||    
T  26541068 tcagaagctattccaagtagcgtttgagcttacagcttat 26541107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 28677034 - 28676895
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| ||||||        |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  28677034 agcttatagcttataagctcgtttgaaaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 28676935  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  28676934 tcagaagctattccaagtagcgtttgagcttatagcttat 28676895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 35499609 - 35499748
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||        ||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  35499609 agcttatagcttataagctcgtttgacaaaaaaatctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 35499708  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  35499709 tcagaagctattccaagtagcgtttgagcttatagcttat 35499748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 37088292 - 37088431
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       ||||||||||||||   || || || | |||||||||||||||||||||||||||||| |||||||    
T  37088292 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaatactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 37088391  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  37088392 tcagaagctattccaagtagcgtttgagcttatagcttat 37088431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 38185778 - 38185917
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  38185778 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 38185877  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||| ||||||||||||    
T  38185878 tcagaagctattccaagtagcgtttgaacttatagcttat 38185917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 45345152 - 45345013
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  45345152 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 45345053  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| | |||| ||||||  |||||||||||||||||||    
T  45345052 tcagaagttattccaagtagcgtttgagcttatagcttat 45345013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 52794903 - 52795042
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || ||  | | |||||||||||||||||||||||||||||| |||||||    
T  52794903 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttccccatgagcttatagcttatttcacgagcttataagctatttt 52795002  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  52795003 tcagaagctattccaagtagcgtttgagcttatagcttat 52795042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 175 - 319
Target Start/End: Original strand, 2598638 - 2598782
Alignment:
Q  175 ctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatag 274  Q
    ||||||||||||| | || || || || | ||||||||||||||||| ||||||||| |||||||||||| | |||| ||||||  |||||||||||||     
T  2598638 ctctgtttggtaatgttttttcaccacaaacttatagcttatttcacaagcttataagctatttttcagaagttattccaagtagcgtttgagcttataa 2598737  T
Q  275 cttatcatcttttcttccatttttacccttatcattttaattaaa 319  Q
    ||||| ||||||| ||| |||||||||||||| | ||||||||||    
T  2598738 cttatgatcttttattctatttttacccttattagtttaattaaa 2598782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 142 - 311
Target Start/End: Original strand, 21707161 - 21707330
Alignment:
Q  142 cttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttc 241  Q
    ||||||||||||||||| |||| ||       | |||||||||||||  || || || | ||| |||||||||||||||||||||||||| |||||||||    
T  21707161 cttatagcttataagctcgtttaacaaaaaaagttctgtttggtaacactttttcaccatgagattatagcttatttcacgagcttataagctatttttc 21707260  T
Q  242 agacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||| |||||| ||||||   |||||||||||||||| |||  |||||||||| |||||||||||| ||||    
T  21707261 agaagctattccaagtagcttttgagcttatagcttctcactttttcttccaattttacccttattattt 21707330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 49853185 - 49853048
Alignment:
Q  142 cttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttc 241  Q
    ||||||||||||||||| |||||||       ||| | |||||||||  || || || | |||||||||||||||||||||||||||||| |||||||||    
T  49853185 cttatagcttataagctcgtttgacaaaaaaggctatctttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttttc 49853086  T
Q  242 agacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||| |||||||||||||  |||||||||||||||||||    
T  49853085 agaagctatttcaagtagcgtttgagcttatagcttat 49853048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 143 - 279
Target Start/End: Complemental strand, 2580068 - 2579932
Alignment:
Q  143 ttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttca 242  Q
    |||||||||||||| | |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| ||||||||||    
T  2580068 ttatagcttataagttcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttttca 2579969  T
Q  243 gacgctatttcaagtatagtttgagcttatagcttat 279  Q
    || |||||| ||||||  |||||||||||||||||||    
T  2579968 gaagctattccaagtagcgtttgagcttatagcttat 2579932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 176 - 279
Target Start/End: Original strand, 7041105 - 7041208
Alignment:
Q  176 tctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc 275  Q
    |||||||||||||| || ||||||||||||||||||||||||||| |||||||||| |||||||||||| |||| ||||||||  |||| |||||||||     
T  7041105 tctgtttggtaacgcttttttacaacgagcttatagcttatttcaggagcttataagctatttttcagaagctacttcaagtagcgtttaagcttatagt 7041204  T
Q  276 ttat 279  Q
    ||||    
T  7041205 ttat 7041208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 139 - 319
Target Start/End: Original strand, 39876621 - 39876801
Alignment:
Q  139 gagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactattt 238  Q
    |||||||||||||||||| | |||||||       |||||||||| ||||  || || |  | |||||||||||||||||||||||||||||| ||||||    
T  39876621 gagcttatagcttataagttcgtttgactaaaaaagctctgtttgataacactttttcatcatgagcttatagcttatttcacgagcttataagctattt 39876720  T
Q  239 ttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaattaaa 319  Q
    |||||| |||||| ||||||  ||||||||||||||||| |||  |||  ||||| |||||||||||| ||| ||| ||||    
T  39876721 ttcagaagctattccaagtagcgtttgagcttatagcttctcacttttaattccaattttacccttattattctaactaaa 39876801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 139 - 319
Target Start/End: Original strand, 41246256 - 41246436
Alignment:
Q  139 gagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactattt 238  Q
    ||||||||||||||||| || |||||||       | ||| |||||||||  || || || | |||||||||||||||||||||||||||||| ||||||    
T  41246256 gagcttatagcttataaactcgtttgacaaaaaaagttctatttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctattt 41246355  T
Q  239 ttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaattaaa 319  Q
    |||||| |||||| ||||||  ||||||||||||||||| |||  |||  ||||| |||||||||||| ||| ||| ||||    
T  41246356 ttcagaagctattccaagtagcgtttgagcttatagcttctcacttttaattccagttttacccttattattctaactaaa 41246436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 51003315 - 51003394
Alignment:
Q  200 acgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||  |||||||||||||||||||    
T  51003315 acgagcttatagcttatttcacgagcttataagctatttttcagacgttatttcaagtagcgtttgagcttatagcttat 51003394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 202 - 313
Target Start/End: Complemental strand, 52868261 - 52868150
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacc 301  Q
    |||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||  ||||||||||||| |||||  | |||||||||| |||||||    
T  52868261 gagcttatagcttatttcacgagcttataagctatttttgagaagctatttcaagtagtgtttgagcttataacttattgttttttcttccacttttacc 52868162  T
Q  302 cttatcatttta 313  Q
    ||| | ||||||    
T  52868161 cttgttatttta 52868150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 140 - 319
Target Start/End: Complemental strand, 55305253 - 55305067
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       | |||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  55305253 agcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 55305154  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagctta-------tcatcttttcttccatttttacccttatcattttaattaaa 319  Q
    |||||  ||||| ||||||  ||||||||||||||||||       |||  |||||||||| |||||||||||| |||||| |||||    
T  55305153 tcagaaactattccaagtagcgtttgagcttatagcttatagcttctcactttttcttccaattttacccttattattttatttaaa 55305067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 4240286 - 4240425
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    |||||||| |||||||||| ||||||        |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  4240286 agcttataacttataagctcgtttgataaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 4240385  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  4240386 tcagaagctattccaagtagcgtttgagcttatagcttat 4240425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 25570387 - 25570526
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||| ||||||||| |||||||    
T  25570387 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacaagcttataagctatttt 25570486  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    | ||| |||||| ||||||  |||||||||||||||||||    
T  25570487 ttagaagctattccaagtagcgtttgagcttatagcttat 25570526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 53779039 - 53779178
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||| ||||||||||||| |||||||       | |||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  53779039 agcttttagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 53779138  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  53779139 tcagaagctattccaagtagtgtttgagcttatagcttat 53779178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 311
Target Start/End: Complemental strand, 54542079 - 54541908
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       | | |||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  54542079 agcttatagcttataagctcgtttgacaaaaaaagttttgtttggtaacattttttcaccatgagcttatagcttatttcacgagcttataagctatttt 54541980  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||| | |||| ||||||  |||||||||||||  || |||  |||||||||| |||||||||||| ||||    
T  54541979 tcagaagttattccaagtagcgtttgagcttataatttctcactttttcttccaattttacccttattattt 54541908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 133 - 279
Target Start/End: Complemental strand, 24628350 - 24628204
Alignment:
Q  133 ctaaatgagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaa 232  Q
    |||||| ||||||||||||||||||| |||||||       |||||||||||||||  || || || | ||||||||||||||||||| ||||||||||     
T  24628350 ctaaattagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacattttttcaccatgagcttatagcttatttcatgagcttataag 24628251  T
Q  233 ctatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||| |||||| ||||||   ||||| ||||||||||||    
T  24628250 ctatttttcagaagctattccaagtaacatttgaacttatagcttat 24628204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 178 - 279
Target Start/End: Original strand, 46972079 - 46972180
Alignment:
Q  178 tgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagctt 277  Q
    |||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||  |||||||||||||||||    
T  46972079 tgtttggtaacactttttgaccatgagcttatagcttatttcacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttatagctt 46972178  T
Q  278 at 279  Q
    ||    
T  46972179 at 46972180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 143 - 279
Target Start/End: Complemental strand, 29718341 - 29718206
Alignment:
Q  143 ttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttca 242  Q
    |||||||||||||||| |||||||       |||||||||||||||  || || |  | |||||||||||||||||||||||||||||| ||||||||||    
T  29718341 ttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactt-ttcatcatgagcttatagcttatttcacgagcttataagctatttttca 29718243  T
Q  243 gacgctatttcaagtatagtttgagcttatagcttat 279  Q
    || |||||| ||||||  |||||||||||||||||||    
T  29718242 gaagctattccaagtagcgtttgagcttatagcttat 29718206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 112 - 279
Target Start/End: Original strand, 52225258 - 52225432
Alignment:
Q  112 tgggtctgtttggtaagctcactaaatgagcttatagct-------tataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgag 204  Q
    ||||||||||||||||| |||  ||||||||||||||||       |||||||| |||||||       | |||||||||||||  || ||||| | |||    
T  52225258 tgggtctgtttggtaagatcagaaaatgagcttatagctcatagcttataagctcgtttgacaacaaaagttctgtttggtaacacttttttaccatgag 52225357  T
Q  205 cttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||| |||||| |||||||||||| ||||||  |||||  |||||||||||||||||||    
T  52225358 cttatagcttatttcacgagtttataagctatttttcagaagctattcaaagtagcgtttgagcttatagcttat 52225432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 2121897 - 2121974
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||||||||    
T  2121897 gagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 2121974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 202 - 319
Target Start/End: Complemental strand, 46318841 - 46318724
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacc 301  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  ||||||||||||||||| |||  |||   |||| |||||||    
T  46318841 gagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcacttttaactccaattttacc 46318742  T
Q  302 cttatcattttaattaaa 319  Q
    ||||| ||| ||| ||||    
T  46318741 cttattattctaactaaa 46318724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 47897688 - 47897611
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||||||||    
T  47897688 gagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 47897611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 178 - 278
Target Start/End: Original strand, 30548790 - 30548890
Alignment:
Q  178 tgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagctt 277  Q
    |||||||||||  || ||||| | ||||||||||||||||||||||| |||||| |||||||||||| |||||| ||||||  |||||||||||||||||    
T  30548790 tgtttggtaacacttttttaccatgagcttatagcttatttcacgagtttataagctatttttcagaagctattccaagtagcgtttgagcttatagctt 30548889  T
Q  278 a 278  Q
    |    
T  30548890 a 30548890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 203 - 279
Target Start/End: Original strand, 30864497 - 30864573
Alignment:
Q  203 agcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||||||||    
T  30864497 agcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 30864573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 179 - 306
Target Start/End: Original strand, 612099 - 612226
Alignment:
Q  179 gtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagctta 278  Q
    ||||||||||| || |||||||||||||||||| || ||| |  |||||||||  |||||| || |||| ||||||||||  ||||||||||||||||||    
T  612099 gtttggtaacgattttttacaacgagcttatagtttcttttagaagcttataacttattttccatacgccatttcaagtagcgtttgagcttatagctta 612198  T
Q  279 tcatcttttcttccatttttacccttat 306  Q
    | ||||||| | ||||||||||| ||||    
T  612199 taatcttttgtcccatttttacctttat 612226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 176 - 279
Target Start/End: Original strand, 2851861 - 2851964
Alignment:
Q  176 tctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc 275  Q
    |||||||||||||  || || || | ||||||||||||||||||| |||||||||| |||||||||||| |||||| ||||||  |||||||||||||||    
T  2851861 tctgtttggtaacactttttcaccatgagcttatagcttatttcatgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagc 2851960  T
Q  276 ttat 279  Q
    ||||    
T  2851961 ttat 2851964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 32026553 - 32026414
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||| | ||| |||       |||||||||| ||| |||| || || |||||||||||| ||||||||| ||||||||| |||||||    
T  32026553 agcttatagcttataagttcgttcgacaaaaaaagctctgtttgataatggtttttcaccacgagcttatagtttatttcacaagcttataagctatttt 32026454  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  ||||||||||||| |||||    
T  32026453 tcagatgctattccaagtagcgtttgagcttataacttat 32026414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 38892130 - 38891991
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||| ||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||| ||||| |||||||    
T  38892130 agcttatagtttataagctcgtttgacaaaaaaagctctgtttggtaacattttttcaccatgagcttatagcttatttcacgagcctataagctatttt 38892031  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||  ||||| ||||||   ||||||||||||||||||    
T  38892030 tcagaaactattccaagtagcatttgagcttatagcttat 38891991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 52166234 - 52166095
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||| ||        |||||||||| |||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  52166234 agcttatagcttataagctcgtttcacaaaaaaatctctgtttggcaacactttttgaccatgagcttatagcttatttcacgagcttataagctatttt 52166135  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||   ||||||||||||||||||    
T  52166134 tcagaagctattccaagtagcatttgagcttatagcttat 52166095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 21603868 - 21603945
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||||||||||||| ||| |||||||| |||||| ||||||  |||||||||||||||||||    
T  21603868 gagcttatagcttatttcacgagcttataagctacttttcagaagctattccaagtagcgtttgagcttatagcttat 21603945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 42497064 - 42497141
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||| |||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||||||||    
T  42497064 gagcttataacttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 42497141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 176 - 277
Target Start/End: Original strand, 48378270 - 48378371
Alignment:
Q  176 tctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc 275  Q
    |||||||||||||  || || || |||||  ||||||||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||||    
T  48378270 tctgtttggtaacattttttcaccacgagtctatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagc 48378369  T
Q  276 tt 277  Q
    ||    
T  48378370 tt 48378371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 50317111 - 50317034
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||||||||||||| |||||||| ||| |||||| ||||||  |||||||||||||||||||    
T  50317111 gagcttatagcttatttcacgagcttataagctattttttagaagctattccaagtagcgtttgagcttatagcttat 50317034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 54672262 - 54672185
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  ||||||||||||| |||||    
T  54672262 gagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttataccttat 54672185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 203 - 279
Target Start/End: Original strand, 50499833 - 50499909
Alignment:
Q  203 agcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||| ||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||||||||    
T  50499833 agcttatagtttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 50499909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 266 - 412
Target Start/End: Complemental strand, 44810956 - 44810813
Alignment:
Q  266 agcttatagcttatcatcttttcttccatttttacccttatcattttaattaaaactcacttttaccctttatatattaaaacacatttattacattttc 365  Q
    ||||| || ||||| || |||| ||||| |||||| ||||| |||||||||||||| ||| ||||||||||||||||||||||||| | ||||| |||||    
T  44810956 agcttttaacttataattttttattccaattttacgcttataattttaattaaaacccacctttaccctttatatattaaaacacactcattacgttttc 44810857  T
Q  366 tatgttttccctctatacttttttgttcctacgtttccagttcctat 412  Q
     ||| ||| || ||||  |||||| ||||| ||||||||||| ||||    
T  44810856 aatgctttgccactat--tttttttttcct-cgtttccagttgctat 44810813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 45693470 - 45693391
Alignment:
Q  200 acgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||| ||||||||||||||||||| ||||||| |||||||||||| |||||| ||||||  |||||||||||||||||||    
T  45693470 acgaacttatagcttatttcacgaacttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 45693391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 176 - 279
Target Start/End: Original strand, 51709055 - 51709158
Alignment:
Q  176 tctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc 275  Q
    |||||||||||||  || || || | ||||||||| |||||||||||||||||||| ||||||||||||  ||||| ||||||  |||||||||||||||    
T  51709055 tctgtttggtaacactttttcaccatgagcttataacttatttcacgagcttataagctatttttcagaaactattccaagtagcgtttgagcttatagc 51709154  T
Q  276 ttat 279  Q
    ||||    
T  51709155 ttat 51709158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 46627579 - 46627502
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||||||||||||||||| |||||| ||| |||||||| |||||| ||||||  |||||||||||||||||||    
T  46627579 gagcttatagcttatttcacgaggttataagctaattttcagaagctattccaagtagcgtttgagcttatagcttat 46627502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 206 - 339
Target Start/End: Complemental strand, 52595412 - 52595279
Alignment:
Q  206 ttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttaccctta 305  Q
    |||||||||||||||| || |||||| |||||||||||| |||||| ||||||  ||| ||||||||| ||| |||   |||||||||||||||||||||    
T  52595412 ttatagcttatttcacaagattataagctatttttcagaagctattccaagtagcgttggagcttataacttctcaaaatttcttccatttttaccctta 52595313  T
Q  306 tcattttaattaaaactcacttttaccctttata 339  Q
      ||||||  |||||  || ||||| ||||||||    
T  52595312 atattttatctaaaatccatttttatcctttata 52595279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 12063809 - 12063733
Alignment:
Q  203 agcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||||||||||||||||||||||| ||||||||||||  ||||| ||||||  ||||||||||||| |||||    
T  12063809 agcttatagcttatttcacgagcttataagctatttttcagaaactattccaagtagcgtttgagcttatatcttat 12063733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 176 - 319
Target Start/End: Original strand, 33391947 - 33392097
Alignment:
Q  176 tctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc 275  Q
    |||||||||||||  || || || | |||||||||| |||||||| |||||||||| |||||||||||| |||||| ||||||  ||||||||||||| |    
T  33391947 tctgtttggtaacactttttcaccatgagcttatagtttatttcatgagcttataagctatttttcagaagctattccaagtagcgtttgagcttataac 33392046  T
Q  276 tta-------tcatcttttcttccatttttacccttatcattttaattaaa 319  Q
    |||       |||  |||||||||| |||||||||||| |||| |||||||    
T  33392047 ttatagtttttcactttttcttccaattttacccttattatttcaattaaa 33392097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 200 - 335
Target Start/End: Original strand, 25146381 - 25146523
Alignment:
Q  200 acgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcat------ctttt-cttcc 292  Q
    ||||||||||| |||||||||| | |||||||  |||||||| ||||||||||||||||  |||||| |||||| ||||| ||      |||||  ||||    
T  25146381 acgagcttataacttatttcaccaacttataacttatttttctgacgctatttcaagtaacgtttgaacttataacttataatttttcacttttaattcc 25146480  T
Q  293 atttttacccttatcattttaattaaaactcacttttaccctt 335  Q
    |||||||||||||  |||||||||||||  |||||||||||||    
T  25146481 atttttacccttactattttaattaaaatccacttttaccctt 25146523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 176 - 251
Target Start/End: Original strand, 47173612 - 47173687
Alignment:
Q  176 tctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatt 251  Q
    |||||||| ||||| || || || | |||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  47173612 tctgtttgataacgctttttcaccatgagcttatagcttatttcacgagcttataagctatttttcagaagctatt 47173687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 42465109 - 42465032
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||| || |||||| |||||||||||| ||||||  |||||  ||||||| |||||||||||    
T  42465109 gagcttatagcttatttcacaagtttataagctatttttcagaagctattctaagtagcgtttgagattatagcttat 42465032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 207 - 279
Target Start/End: Original strand, 5506704 - 5506776
Alignment:
Q  207 tatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||| | |||||||||| ||||||||||||  ||||| ||||||  |||||||||||||||||||    
T  5506704 tatagcttattttatgagcttataagctatttttcagatactattacaagtagcgtttgagcttatagcttat 5506776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 35100284 - 35100368
Alignment:
Q  235 atttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaattaaa 319  Q
    |||||||||| |||||| ||||||  |||||||||||||||||||||| |||  ||||| |||||||||||| ||| ||| ||||    
T  35100284 atttttcagaagctattccaagtagcgtttgagcttatagcttatcatttttaattccaattttacccttattattctaactaaa 35100368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 39469921 - 39470018
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatt 237  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||| ||||||||| |||||    
T  39469921 agcttatagcttataagctcgtttgaccaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacaagcttataagctatt 39470018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 196 - 279
Target Start/End: Original strand, 22257717 - 22257800
Alignment:
Q  196 tacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||| ||||||||||||||||  |||||||    ||||||||| | |||||||||||||  |||||||||||||||||||    
T  22257717 tacaacgaccttatagcttatttcataagcttattgcttatttttcaaatgctatttcaagtagcgtttgagcttatagcttat 22257800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 24350349 - 24350294
Alignment:
Q  200 acgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaa 255  Q
    |||||||||||| |||||||||||| ||||||| ||||||||||||||| ||||||    
T  24350349 acgagcttatagtttatttcacgagtttataaattatttttcagacgctgtttcaa 24350294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 32982986 - 32982921
Alignment:
Q  210 agcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc 275  Q
    ||||||||| |||||||||||| ||||||||| || |||||||||||||  | |||||||||||||    
T  32982986 agcttattttacgagcttataagctatttttcggaagctatttcaagtaatgcttgagcttatagc 32982921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 9338856 - 9338792
Alignment:
Q  194 tttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagta 258  Q
    |||||||||||||||||||||||||||  |||||||||  ||||||| | | |||||||||||||    
T  9338856 tttacaacgagcttatagcttatttcataagcttataacttattttttaaatgctatttcaagta 9338792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 44545238 - 44545335
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatt 237  Q
    ||||||||||||||||||| |||||||       | |||||||||||||  || || || | || ||||||||||||||||||||||||||| |||||    
T  44545238 agcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgaacttatagcttatttcacgagcttataagctatt 44545335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 52931206 - 52931118
Alignment:
Q  223 agcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    |||||||||  ||||||||||| |||||| ||||||  |||| |||||||||||| |||  ||||||| || |||||||||||| ||||    
T  52931206 agcttataagttatttttcagaagctattccaagtagcgtttaagcttatagcttctcactttttctttcaattttacccttattattt 52931118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 319
Target Start/End: Complemental strand, 30814394 - 30814215
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    |||||||||||| |||||| |||||||       | | |||||||||||  || || || | ||||||||||||||||||||||| ||||||  ||||||    
T  30814394 agcttatagcttttaagctcgtttgacaaaaaaagttttgtttggtaacactttttcaccatgagcttatagcttatttcacgagtttataagatatttt 30814295  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaattaaa 319  Q
    || ||  ||||| ||||||  |||||| |||||| ||| |||  |||  ||||| |||||| ||||| ||| ||| ||||    
T  30814294 tcggaaactattccaagtagcgtttgaacttataacttttcacttttaattccaattttactcttattattctaactaaa 30814215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 2187374 - 2187333
Alignment:
Q  113 gggtctgtttggtaagctcactaaatgagcttatagcttata 154  Q
    ||||||||||||||||| |||||||||||||| |||||||||    
T  2187374 gggtctgtttggtaagcccactaaatgagcttttagcttata 2187333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 140 - 206
Target Start/End: Original strand, 5505859 - 5505925
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagct 206  Q
    ||||||||||||||||||| |||||||       |||||||||||||||| || |||||||||||||    
T  5505859 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacgattttttacaacgagct 5505925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 27446501 - 27446550
Alignment:
Q  206 ttatagcttatttcacgagcttataaactatttttcagacgctatttcaa 255  Q
    ||||||||||||||||||| |||||  |||||||||||| ||||||||||    
T  27446501 ttatagcttatttcacgagtttatatgctatttttcagaagctatttcaa 27446550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 237
Target Start/End: Complemental strand, 43740384 - 43740325
Alignment:
Q  178 tgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatt 237  Q
    ||||||||||| ||| || || | ||| |||||||||||||||||||||||||| |||||    
T  43740384 tgtttggtaacagtttttcaccatgagtttatagcttatttcacgagcttataagctatt 43740325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 305
Target Start/End: Original strand, 55118562 - 55118633
Alignment:
Q  234 tatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttaccctta 305  Q
    |||||| |||||||||||| |||||  ||||||| ||||||| |||  | |||||||||| |||||||||||    
T  55118562 tattttacagacgctattttaagtagcgtttgagtttatagcatattgttttttcttccacttttaccctta 55118633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 320
Target Start/End: Original strand, 5506770 - 5506824
Alignment:
Q  266 agcttatagcttatcatcttttcttccatttttacccttatcattttaattaaaa 320  Q
    ||||||||||||||||| |||| |||||||| |||||||| || ||||| |||||    
T  5506770 agcttatagcttatcatgttttattccatttatacccttaccactttaactaaaa 5506824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 234 - 313
Target Start/End: Original strand, 41538407 - 41538492
Alignment:
Q  234 tatttttcagacgctatttcaagtatagtttgagctta------tagcttatcatcttttcttccatttttacccttatcatttta 313  Q
    |||||| |||||| |||||||||||  ||||||||||       ||||||||||| |||||||||| |||||||||||| ||||||    
T  41538407 tattttccagacgttatttcaagtagtgtttgagctttaacttgtagcttatcattttttcttccaattttacccttattatttta 41538492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 31558376 - 31558335
Alignment:
Q  113 gggtctgtttggtaagctcactaaatgagcttatagcttata 154  Q
    ||||||||||||||||| ||||||||||||||  ||||||||    
T  31558376 gggtctgtttggtaagcccactaaatgagctttgagcttata 31558335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 165
Target Start/End: Original strand, 13285925 - 13285977
Alignment:
Q  113 gggtctgtttggtaagctcactaaatgagcttatagcttataagcttgtttga 165  Q
    |||||||||||||||  |||  ||| |||||||||||||||||||| ||||||    
T  13285925 gggtctgtttggtaaagtcatcaaacgagcttatagcttataagctcgtttga 13285977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 335
Target Start/End: Complemental strand, 35474564 - 35474488
Alignment:
Q  260 agtttgagcttatagcttatcatcttttcttccatttttaccc-ttatcattttaattaaaactcacttttaccctt 335  Q
    ||||||||||||||| ||||||   |||||| ||||||| ||| || | |||||||| |||||||| ||||||||||    
T  35474564 agtttgagcttatagtttatcaatatttctttcatttttgcccttttttattttaatcaaaactcagttttaccctt 35474488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 154
Target Start/End: Complemental strand, 39719349 - 39719313
Alignment:
Q  118 tgtttggtaagctcactaaatgagcttatagcttata 154  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  39719349 tgttttgtaagctcactaaataagcttatagcttata 39719313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 155; Significance: 5e-82; HSPs: 92)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 140 - 506
Target Start/End: Complemental strand, 7781288 - 7780919
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| ||||||        |||||||||||||  |  | || || |||||||||||||||||||||||||||||||| |||||||    
T  7781288 agcttatagcttataagctcgtttgataaaaaaagctctgtttggtactgtcttttcaccacgagcttatagcttatttcacgagcttataagctatttt 7781189  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat-------catcttttcttccatttttacccttatcattttaattaaaactcacttttacc 332  Q
    ||||| |||||| ||||||  |||||||||||||||||||       ||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  7781188 tcagaagctattccaagtagtgtttgagcttatagcttatagcttatcatcttttctttcatttttacccttatcattttaattaaaacccacttttacc 7781089  T
Q  333 ctttatatattaaaacacatttattacattttctatgttttccctctatacttttttgttcctacgtttccagttcctatatacttccaat----ttagt 428  Q
    ||||||||||||||||||||||||||| ||||||||||             |||||||||||||||||||||||| |||||||||||||||    |||||    
T  7781088 ctttatatattaaaacacatttattacgttttctatgt-------------ttttttgttcctacgtttccagtttctatatacttccaatttaattagt 7781002  T
Q  429 acaactcaac--------tactcttcaaataaataaataaaactactcgagcatattttttgagcatatttttcatatattcatct 506  Q
    ||||||||||        |||||||||||||   ||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7781001 acaactcaactactcgagtactcttcaaata---aaaaaaaactactggagcatattttttgagcatatttttcatatattcatct 7780919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 176 - 335
Target Start/End: Original strand, 25134895 - 25135054
Alignment:
Q  176 tctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc 275  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||  |||||||||||||||    
T  25134895 tctgtttggtaacagttttttacaacgagcttatagcttatttcacgagcttataagctatttttcagacgctattttaagtagtgtttgagcttatagc 25134994  T
Q  276 ttatcatcttttcttccatttttacccttatcattttaattaaaactcacttttaccctt 335  Q
    ||||||  |||| || |||| ||| |||||  |||||||||||||| ||||||| |||||    
T  25134995 ttatcactttttatttcattattatccttactattttaattaaaacccacttttgccctt 25135054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 140 - 311
Target Start/End: Complemental strand, 13121708 - 13121537
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  13121708 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 13121609  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||| |||||| ||||||  |||||||||||||||||||||  |||||||||| |||||||||||| ||||    
T  13121608 tcagaagctattccaagtagcgtttgagcttatagcttatcactttttcttccaattttacccttattattt 13121537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 17 - 127
Target Start/End: Original strand, 33151849 - 33151959
Alignment:
Q  17 ataaacacattctacctctaataaaaggatacttatatatagggacagaggaagtattgacgtagtcggaagtgtagactagcaagcactaaacctgggt 116  Q
    |||| |||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  33151849 ataagcacattctgcctctaataaaaggatgtttatatatagggacagaggaagtattgacgtagtcggaagtgtagactggcaagcattaaacctgggt 33151948  T
Q  117 ctgtttggtaa 127  Q
    |||||||||||    
T  33151949 ctgtttggtaa 33151959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 140 - 311
Target Start/End: Original strand, 39826611 - 39826782
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  39826611 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 39826710  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||| |||||| ||||||  ||||||||||||||||| |||  |||||||||| |||||||||||| ||||    
T  39826711 tcagaagctattccaagtagcgtttgagcttatagcttctcacattttcttccaattttacccttattattt 39826782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 322876 - 323015
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    |||||||||||||||||||||||||||       | |||||||||||||  || ||||| | ||||||||||||||||||||||||||||||||||||||    
T  322876 agcttatagcttataagcttgtttgacaaaaaaagttctgtttggtaacacttttttaccatgagcttatagcttatttcacgagcttataaactatttt 322975  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  322976 tcagaagctattccaagtagcgtttgagcttatagcttat 323015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 140 - 311
Target Start/End: Original strand, 17046740 - 17046911
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       ||| |||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  17046740 agcttatagcttataagctcgtttgacaaaaaaagctttgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 17046839  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||| |||||| ||||||  ||||||||||||||||| |||  |||||||||| |||||||||||| ||||    
T  17046840 tcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 17046911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 140 - 311
Target Start/End: Original strand, 25601997 - 25602168
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||| ||||||||| |||||||       ||||||||||||| |  || ||||| | || ||||||||||||||||||||||||||| |||||||    
T  25601997 agcttataggttataagctcgtttgacaaaaaaagctctgtttggtatcacttttttaccatgaccttatagcttatttcacgagcttataagctatttt 25602096  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||| |||||||||||||  ||||||||||||||||| |||  |||||||||| |||||||||||| ||||    
T  25602097 tcagaagctatttcaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 25602168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 140 - 311
Target Start/End: Complemental strand, 44719095 - 44718924
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||||||||| |       |||||||||||||| |  | || || ||||||||||||||||||| ||||||||||||||||||||    
T  44719095 agcttatagcttataagcttgtttggcaaaaaaagctctgtttggtaatgtcttttcaccacgagcttatagcttattttacgagcttataaactatttt 44718996  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    |||||||||||||||||||  |||| |||||||| ||| |||  ||||||| || |||||||||||| ||||    
T  44718995 tcagacgctatttcaagtagcgtttaagcttataacttctcactttttctttcaattttacccttattattt 44718924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 140 - 311
Target Start/End: Complemental strand, 38967587 - 38967417
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  38967587 agcttatagcttataagctcgtttgacaaaaaa-gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 38967489  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||| |||||| ||||||  ||||||||||||||||| |||  |||||||||| |||||||||||| ||||    
T  38967488 tcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 38967417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 29586169 - 29586308
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || ||||| | |||||||||||||||||||||||||||||| |||||||    
T  29586169 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacacttttttaccatgagcttatagcttatttcacgagcttataagctatttt 29586268  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  29586269 tcagaagctattccaagtagcgtttgagcttatagcttat 29586308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 34318417 - 34318556
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||||||| |||       |||||||||||||| |||| || || ||||||||||||||||||| |||||||||||| |||||||    
T  34318417 agcttatagcttataagcttgttcgacaaaaaaagctctgtttggtaatggtttttcaccacgagcttatagcttattttacgagcttataagctatttt 34318516  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  34318517 tcagatgctattccaagtagtgtttgagcttatagcttat 34318556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 140 - 311
Target Start/End: Complemental strand, 18347539 - 18347369
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||| |||||||||       |||||||||||||| |  | || || |||||||||||||||||||||| ||||||||| |||||||    
T  18347539 agcttatagcttataagtttgtttgacaaaaaa-gctctgtttggtaatgtcttttcaccacgagcttatagcttatttcacaagcttataagctatttt 18347441  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    |||||| ||||| ||||||  ||||||||||||||||| |||  |||||||||| |||||||||||| ||||    
T  18347440 tcagacactattccaagtagtgtttgagcttatagcttctcactttttcttccaattttacccttattattt 18347369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 200 - 336
Target Start/End: Complemental strand, 46056490 - 46056354
Alignment:
Q  200 acgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccattttta 299  Q
    |||| ||||||| |||||||||||||||||||  |||||||||||||||||||||||||   ||| |||||||||||||| ||||||| || ||||||||    
T  46056490 acgaacttatagtttatttcacgagcttataagatatttttcagacgctatttcaagtagcatttaagcttatagcttattatcttttgtttcattttta 46056391  T
Q  300 cccttatcattttaattaaaactcacttttacccttt 336  Q
    |||| |||| |||||||||||  || |||||||||||    
T  46056390 ccctcatcactttaattaaaatccatttttacccttt 46056354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 142 - 311
Target Start/End: Complemental strand, 47134653 - 47134484
Alignment:
Q  142 cttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttc 241  Q
    ||||||||||||||||| |||||||       |||||||||||||||  || || || | ||||||||||||||||||| |||||||||| |||||||||    
T  47134653 cttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcatgagcttataagctatttttc 47134554  T
Q  242 agacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||| ||||||  |||||  |||||||||||||||||||||  |||||||| | |||||||||||| ||||    
T  47134553 agaagctattctaagtagcgtttgagcttatagcttatcactttttcttctaattttacccttattattt 47134484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 179 - 306
Target Start/End: Original strand, 44956328 - 44956455
Alignment:
Q  179 gtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagctta 278  Q
    ||||||||| |||| ||||| | ||||||||||||||||| ||||| ||||||  ||||||||||| |||||| |||||| |||||||||||||| ||||    
T  44956328 gtttggtaatggttttttaccatgagcttatagcttatttaacgagattataagttatttttcagatgctattccaagtagagtttgagcttataactta 44956427  T
Q  279 tcatcttttcttccatttttacccttat 306  Q
    |||| ||||||||||||||||| |||||    
T  44956428 tcatattttcttccatttttacgcttat 44956455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 1918036 - 1918175
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  1918036 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 1918135  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  1918136 tcagaagctattccaagtagcgtttgagcttatagcttat 1918175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 311
Target Start/End: Complemental strand, 7711078 - 7710907
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||| | |||||||        ||||||||||||||  || || |  | |||||||||||||||||||||||||||||| |||||||    
T  7711078 agcttatagcttataagttcgtttgacaaaaaaaactctgtttggtaacactttttcatcatgagcttatagcttatttcacgagcttataagctatttt 7710979  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||| |||||| ||||||  ||||||||||||||||| |||  |||||||||| |||||||||||| ||||    
T  7710978 tcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 7710907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 29704208 - 29704069
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    |||||||||||||||||||||||||||       |||||||||||||||  || || || | ||||||||| |||||||||||||||||||| |||||||    
T  29704208 agcttatagcttataagcttgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttataacttatttcacgagcttataagctatttt 29704109  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  29704108 tcagaagctattccaagtagcgtttgagcttatagcttat 29704069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 42064441 - 42064302
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  42064441 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 42064342  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  42064341 tcagaagctattccaagtagcgtttgagcttatagcttat 42064302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 205 - 339
Target Start/End: Original strand, 50540848 - 50540982
Alignment:
Q  205 cttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttaccctt 304  Q
    |||||||||||||||||||| |||||| |||||||||||| |||||| ||||||  ||||||||||||||||| |||| |||| |  |||||||||||||    
T  50540848 cttatagcttatttcacgagtttataagctatttttcagaagctattacaagtagcgtttgagcttatagcttctcatattttatctcatttttaccctt 50540947  T
Q  305 atcattttaattaaaactcacttttaccctttata 339  Q
    || |||||||||||||  ||  |||||||||||||    
T  50540948 attattttaattaaaatccatgtttaccctttata 50540982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 175 - 279
Target Start/End: Original strand, 5697523 - 5697627
Alignment:
Q  175 ctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatag 274  Q
    |||| ||||||||| ||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||  |||||||||||||     
T  5697523 ctctatttggtaacagttttttacaatgagcttatagcttatttcacgagcttataagctatttttcagacgctattccaagtagcgtttgagcttatac 5697622  T
Q  275 cttat 279  Q
    |||||    
T  5697623 cttat 5697627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 44909853 - 44909990
Alignment:
Q  142 cttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttc 241  Q
    ||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||||    
T  44909853 cttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttttc 44909952  T
Q  242 agacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||| |||||| ||||||  |||||||||||||||||||    
T  44909953 agaagctattccaagtagcgtttgagcttatagcttat 44909990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 26204285 - 26204424
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| ||||||        |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  26204285 agcttatagcttataagctcgtttgataaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 26204384  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  26204385 tcagaagctattccaagtagcgtttgagcttatagcttat 26204424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 31150549 - 31150410
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||| ||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  31150549 agcttatagcttataagctcgtttgacaaaaaaagctctgttgggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 31150450  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  31150449 tcagaagctattccaagtagcgtttgagcttatagcttat 31150410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 32368463 - 32368324
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    |||||||||||||||||||||||||||       |||||||||||||||  || || || | ||||||||| |||||||||||||||||||  |||||||    
T  32368463 agcttatagcttataagcttgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttataacttatttcacgagcttatatgctatttt 32368364  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  32368363 tcagaagctattccaagtagcgtttgagcttatagcttat 32368324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 33151948 - 33152111
Alignment:
Q  176 tctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagctt----- 270  Q
    |||||||||||| |||||||||||||||||||||       ||||||||||||||| |||||||| ||| |||||||||||||  ||||||||||         
T  33151948 tctgtttggtaatggttgtttacaacgagcttat-------ttcacgagcttataagctatttttaagaagctatttcaagtagcgtttgagcttgtaac 33152040  T
Q  271 --atagcttatcatcttttcttccatttttacccttatcattttaattaaaactcacttttaccctttata 339  Q
      ||||||| |||||||||||||||||||||||||||| ||||||  ||||| ||| |||||||| |||||    
T  33152041 ttatagcttctcatcttttcttccatttttacccttattattttatctaaaattcaattttacccattata 33152111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 33524539 - 33524678
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||||||||||        |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  33524539 agcttatagcttataagcttgtttgataaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 33524638  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||| ||||    
T  33524639 tcagaagctattccaagtagcgtttgagcttatagtttat 33524678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 136 - 339
Target Start/End: Complemental strand, 49240409 - 49240206
Alignment:
Q  136 aatgagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaacta 235  Q
    ||||||||||||||||||||| | || ||||       |||||||||||||| | || || || | || |||||||||||||||| |||||||||| |||    
T  49240409 aatgagcttatagcttataagttcgtatgacaaaaaaagctctgtttggtaatgctttttcactatgaacttatagcttatttcatgagcttataagcta 49240310  T
Q  236 tttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaattaaaactcacttttaccctt 335  Q
    ||||||||| |||||||||| ||  ||||||||||||||||| |||    ||||||||||||||||||||  ||||||  |||||  || ||||| ||||    
T  49240309 tttttcagaagctatttcaaatagcgtttgagcttatagcttctcaaaagttcttccatttttacccttaatattttatctaaaatccatttttatcctt 49240210  T
Q  336 tata 339  Q
    ||||    
T  49240209 tata 49240206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 50351043 - 50351182
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  50351043 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttaaccatgagcttatagcttatttcacgagcttataagctatttt 50351142  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  ||||||| |||||||||||    
T  50351143 tcagaagctattccaagtagcgtttgaggttatagcttat 50351182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 338
Target Start/End: Complemental strand, 52703235 - 52703030
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||         |||||||||||| | |   |||| ||||||||||||||||||||||||||||||||  ||||||    
T  52703235 agcttatagcttataagctcgtttgacaaaaaaaattctgtttggtaatgctctcttaccacgagcttatagcttatttcacgagcttataagttatttt 52703136  T
Q  240 tcagacgctatttcaagtatagtttgagcttata-------gcttatcatcttttcttccatttttacccttatcattttaattaaaactcacttttacc 332  Q
    ||||| |||||||||||||  |||||||||||||       |||| | ||||||| || ||||||||||||||| ||||||| ||||| |||  ||||||    
T  52703135 tcagaagctatttcaagtagcgtttgagcttatagcttttagctttttatcttttatttcatttttacccttattattttaactaaaagtcatatttacc 52703036  T
Q  333 ctttat 338  Q
    ||||||    
T  52703035 ctttat 52703030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 140 - 313
Target Start/End: Original strand, 34086977 - 34087150
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| || ||||       ||||||||||||||   || || || | |||||||||||| ||||||||||||||||| |||||||    
T  34086977 agcttatagcttataagctcgtctgacaaaaaaagctctgtttggtaatactttttcaccatgagcttatagctaatttcacgagcttataagctatttt 34087076  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcatttta 313  Q
    | ||| |||||| || |||  ||||||||||||||||||| || |||||||||| |||||||||| | ||||||    
T  34087077 tgagaagctattccaggtagcgtttgagcttatagcttattattttttcttccacttttacccttgttatttta 34087150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 38676502 - 38676639
Alignment:
Q  142 cttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttc 241  Q
    ||||||| ||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||| ||||||| |||||||||    
T  38676502 cttatagtttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgaacttataagctatttttc 38676601  T
Q  242 agacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||| |||||||||||||  |||||||||||||||||||    
T  38676602 agaagctatttcaagtagcgtttgagcttatagcttat 38676639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 176 - 279
Target Start/End: Original strand, 3270705 - 3270808
Alignment:
Q  176 tctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc 275  Q
    |||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||  |||||||||||||||    
T  3270705 tctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttatagc 3270804  T
Q  276 ttat 279  Q
    ||||    
T  3270805 ttat 3270808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 143 - 279
Target Start/End: Complemental strand, 17500006 - 17499870
Alignment:
Q  143 ttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttca 242  Q
    |||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| ||||||||||    
T  17500006 ttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttttca 17499907  T
Q  243 gacgctatttcaagtatagtttgagcttatagcttat 279  Q
    || |||||| ||||||  |||| ||||||||||||||    
T  17499906 gaagctattccaagtagcgtttaagcttatagcttat 17499870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 113 - 244
Target Start/End: Original strand, 28429018 - 28429144
Alignment:
Q  113 gggtctgtttggtaagctcactaaatgagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagc 212  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||         |||||||||||||  || || || | |||||||||||    
T  28429018 gggtctgtttggtaagcccactaaatgagcttatagcttataagcttatttgacaaat-----tctgtttggtaacactttttcaccatgagcttatagc 28429112  T
Q  213 ttatttcacgagcttataaactatttttcaga 244  Q
    ||||||||||||||||||| ||||||||||||    
T  28429113 ttatttcacgagcttataagctatttttcaga 28429144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 2497933 - 2498072
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||| ||||||||| |||||||       |||||||||||||||   | || || | |||||||||||||||||||||||||||||| |||||||    
T  2497933 agcttatagtttataagctcgtttgacaaaaaaagctctgtttggtaacaccttttcaccatgagcttatagcttatttcacgagcttataagctatttt 2498032  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  2498033 tcagaagctattccaagtagcgtttgagcttatagcttat 2498072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 19899032 - 19898893
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||| | |||||||       | |||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  19899032 agcttatagcttataagttcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 19898933  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  19898932 tcagaagctattccaagtagcgtttgagcttatagcttat 19898893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 29374341 - 29374480
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||| ||||||||||||| ||||||        ||||||||||||||   || ||||| | ||||||||||||||||||| |||||||||| |||||||    
T  29374341 agcttttagcttataagctcgtttgataaaaaaagctctgtttggtaatacttttttaccatgagcttatagcttatttcaagagcttataagctatttt 29374440  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| |||||| ||||||||||||||||||||    
T  29374441 tcagaagctattccaagtagagtttgagcttatagcttat 29374480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 36838819 - 36838680
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       | |||||||||||||  || ||  | | |||||||||||||||||||||||||||||| |||||||    
T  36838819 agcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttctccatgagcttatagcttatttcacgagcttataagctatttt 36838720  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  36838719 tcagaagctattccaagtagcgtttgagcttatagcttat 36838680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 49220597 - 49220458
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||        ||||||||||||||  || || ||   ||||||| |||||||||||||||||||||| |||||||    
T  49220597 agcttatagcttataagctcgtttgacaaaaaaaactctgtttggtaacactttttcaccgtgagcttacagcttatttcacgagcttataagctatttt 49220498  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||||||||||  |||||||||||||||||||    
T  49220497 tcagaagctatttcaagtagcgtttgagcttatagcttat 49220458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 8221325 - 8221220
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |  ||||| ||| ||  ||||||  |||||    
T  8221325 gctctgtttggtaacggttttttacaacgagcttatagcttatttcacgagcttataagctatttttcaaaaactattccaaatagcgtttgaatttata 8221226  T
Q  274 gcttat 279  Q
    ||||||    
T  8221225 gcttat 8221220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 36301228 - 36301090
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||| ||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  36301228 agcttatagcttataagctcgtttgacaaaaaa-gctctgtttgataacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 36301130  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  36301129 tcagaagctattccaagtagcgtttgagcttatagcttat 36301090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 205 - 339
Target Start/End: Original strand, 3391196 - 3391337
Alignment:
Q  205 cttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagctta-------tcatcttttcttccatttt 297  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||  |||| |||||||||||||       |||| |||| | |||||||    
T  3391196 cttatagtttatttcacgagcttataaactatttttcagaagctattccaagtaacgtttaagcttatagcttatagcttctcatattttatcccatttt 3391295  T
Q  298 tacccttatcattttaattaaaactcacttttaccctttata 339  Q
    ||||||||| |||||||||||||  ||  |||||||||||||    
T  3391296 tacccttattattttaattaaaatccatgtttaccctttata 3391337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 176 - 279
Target Start/End: Complemental strand, 28869099 - 28868996
Alignment:
Q  176 tctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc 275  Q
    |||||||||||| |||| ||||||||||| |||||| |||||||||||||||||||| ||||||| |||   |||||||||||  |||||||||||||||    
T  28869099 tctgtttggtaaaggttttttacaacgagtttatagtttatttcacgagcttataaattatttttaagaaattatttcaagtaacgtttgagcttatagc 28869000  T
Q  276 ttat 279  Q
    ||||    
T  28868999 ttat 28868996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 30721748 - 30721608
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnn-gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactattt 238  Q
    ||||||||||||||||||| |||||||        |||||||||||||||  || || || | || ||||||||||||||||||||||||||| ||||||    
T  30721748 agcttatagcttataagctcgtttgacaaaaaaaagctctgtttggtaacactttttcaccatgaacttatagcttatttcacgagcttataagctattt 30721649  T
Q  239 ttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||| |||||| ||||||  |||||||||||||||||||    
T  30721648 ttcagaagctattccaagtagcgtttgagcttatagcttat 30721608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 26843762 - 26843901
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       ||||| |||| |||   || || || | |||||||||||||||||||||||||||||| |||||||    
T  26843762 agcttatagcttataagctcgtttgacaaaaaaagctctatttgataatactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 26843861  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||||||||||  ||||||| |||||||||||    
T  26843862 tcagaagctatttcaagtagcgtttgagtttatagcttat 26843901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 34319400 - 34319539
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||| ||       | |||||||||||||  || || || | || ||||||||||||||||||||||||||| |||||||    
T  34319400 agcttatagcttataagctcgtttcacaaaaaaagttctgtttggtaacactttttgaccatgaccttatagcttatttcacgagcttataagctatttt 34319499  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  34319500 tcagaagctattccaagtagcgtttgagcttatagcttat 34319539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 49822229 - 49822152
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||  |||||||||||||||||||    
T  49822229 gagcttatagcttatttcacgagcttataaactattttttagaagttatttcaagtagcgtttgagcttatagcttat 49822152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 175 - 279
Target Start/End: Original strand, 37703716 - 37703820
Alignment:
Q  175 ctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatag 274  Q
    ||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||     
T  37703716 ctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtaacgtttgagcttataa 37703815  T
Q  275 cttat 279  Q
    |||||    
T  37703816 cttat 37703820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 49185246 - 49185170
Alignment:
Q  203 agcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||  |||||||||||||||||||    
T  49185246 agcttatagcttatttcacaagcttataaactatttttcagaagctattccaagtaacgtttgagcttatagcttat 49185170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 176 - 279
Target Start/End: Complemental strand, 36043388 - 36043285
Alignment:
Q  176 tctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc 275  Q
    ||||||||||||| ||| || || | |||||||||| ||||||||||||||||||| |||||||||||| ||||||  |||||  |||||||||||||||    
T  36043388 tctgtttggtaacagtttttcaccatgagcttatagtttatttcacgagcttataagctatttttcagatgctattctaagtagcgtttgagcttatagc 36043289  T
Q  276 ttat 279  Q
    ||||    
T  36043288 ttat 36043285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 143 - 279
Target Start/End: Complemental strand, 50171418 - 50171282
Alignment:
Q  143 ttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttca 242  Q
    ||||||||||||||||||||||||         |||||||||||||   | ||||| | |||||||||||||||||||| ||||||||| ||||||||||    
T  50171418 ttatagcttataagcttgtttgacaaaaaaaattctgtttggtaacacctttttaccatgagcttatagcttatttcacaagcttataagctatttttca 50171319  T
Q  243 gacgctatttcaagtatagtttgagcttatagcttat 279  Q
    || |||||| ||||||   ||||||||||||||||||    
T  50171318 gaagctattccaagtagcatttgagcttatagcttat 50171282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 3660956 - 3661095
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    |||||||||||||||||||  ||||||       | |||||||||||||  || || || | ||||||||| |||||||||||||||||||| |||||||    
T  3660956 agcttatagcttataagctcatttgacaacaaaagttctgtttggtaacactttttcaccatgagcttatatcttatttcacgagcttataagctatttt 3661055  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||| | |||||| ||||||  |||||||||||||||||||    
T  3661056 tcaaaagctattccaagtagcgtttgagcttatagcttat 3661095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 15313316 - 15313393
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||| ||||||||| |||||||||||| |||||| ||||||  |||||||||||||||||||    
T  15313316 gagcttatagcttatttcacaagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 15313393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 178 - 279
Target Start/End: Original strand, 15348873 - 15348974
Alignment:
Q  178 tgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagctt 277  Q
    |||||||||||  || || || | ||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||  |||||||||||||| ||    
T  15348873 tgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataaattatttttcagaagctattccaagtagcgtttgagcttatagttt 15348972  T
Q  278 at 279  Q
    ||    
T  15348973 at 15348974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 198 - 335
Target Start/End: Complemental strand, 27659431 - 27659294
Alignment:
Q  198 caacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttt 297  Q
    |||||| |||||| ||||||||| ||| |||||   |||||| || |||||||||||||||  ||||||||||||| ||||||||||||| |   |||||    
T  27659431 caacgaacttataacttatttcaggagtttatagtttattttccaaacgctatttcaagtagcgtttgagcttataacttatcatcttttatcttatttt 27659332  T
Q  298 tacccttatcattttaattaaaactcacttttaccctt 335  Q
    ||||||||| ||||| | |||||||||  |||||||||    
T  27659331 tacccttattattttgaataaaactcatgtttaccctt 27659294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 206 - 279
Target Start/End: Original strand, 30774158 - 30774231
Alignment:
Q  206 ttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||||||||    
T  30774158 ttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 30774231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 203 - 287
Target Start/End: Complemental strand, 2029037 - 2028953
Alignment:
Q  203 agcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatctttt 287  Q
    ||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||  |||| || ||||| |||||||||||||    
T  2029037 agcttatagtttatttaacgagtttataaactatttttcagacgctatttcaagtaccgtttaagattataacttatcatctttt 2028953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 175 - 279
Target Start/End: Complemental strand, 37672439 - 37672335
Alignment:
Q  175 ctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatag 274  Q
    ||||||||||||||  || || || | ||||||||||||||||||||||| |||||| |||||||||||| |||||| ||||||  |||||||||||||     
T  37672439 ctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagtttataagctatttttcagaagctattccaagtaacgtttgagcttataa 37672340  T
Q  275 cttat 279  Q
    |||||    
T  37672339 cttat 37672335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 203 - 279
Target Start/End: Original strand, 40887949 - 40888025
Alignment:
Q  203 agcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||| |||||||||||| |||||||||||| |||||| ||||||  |||||||||||||||||||    
T  40887949 agcttatagcttattttacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 40888025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 41005051 - 41004937
Alignment:
Q  206 ttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagctta-------tcatcttttcttccattttt 298  Q
    ||||||||||||||| ||||||||||  ||||||| ||| |||||||||||||  |||||| |||||||||||       ||||||||||||||||||||    
T  41005051 ttatagcttatttcatgagcttataagttatttttaagaagctatttcaagtagcgtttgaacttatagcttatagcttctcatcttttcttccattttt 41004952  T
Q  299 acccttatcatttta 313  Q
    |||||||| ||||||    
T  41004951 acccttattatttta 41004937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 1507868 - 1507728
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnn-gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactattt 238  Q
    ||||||||||||||||||| |||||||        |||||||||||||||  || || || |  || |||||||||||||||||||||||||| ||||||    
T  1507868 agcttatagcttataagctcgtttgacaaaaagaagctctgtttggtaacactttttcaccattagtttatagcttatttcacgagcttataagctattt 1507769  T
Q  239 ttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||| |||||| ||| ||  |||||||||||||||||||    
T  1507768 ttcagaagctattccaaatagcgtttgagcttatagcttat 1507728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 13570857 - 13570778
Alignment:
Q  200 acgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||| ||  |||||| ||||||||||||    
T  13570857 acgagcttatagcttatttcacgaacttataagctatttttcagacgctattccaaatagcgtttgaacttatagcttat 13570778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 176 - 279
Target Start/End: Original strand, 22098965 - 22099068
Alignment:
Q  176 tctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc 275  Q
    |||||||||||||  || || || | ||||||||||||||||||||||| |||||| |||||||| ||| |||||| ||||||  |||||||||||||||    
T  22098965 tctgtttggtaacattttttcaccatgagcttatagcttatttcacgagtttataagctattttttagaagctattccaagtagcgtttgagcttatagc 22099064  T
Q  276 ttat 279  Q
    ||||    
T  22099065 ttat 22099068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 202 - 313
Target Start/End: Original strand, 42963901 - 42964012
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacc 301  Q
    |||||||||  |||||| ||||| |||||| |||||||| ||| |||||||||||||  ||||||||||| |||||||  | |||||||||| |||||||    
T  42963901 gagcttataatttattttacgagtttataagctatttttgagaagctatttcaagtagcgtttgagcttacagcttattgttttttcttccacttttacc 42964000  T
Q  302 cttatcatttta 313  Q
    ||||| ||||||    
T  42964001 cttattatttta 42964012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 200 - 306
Target Start/End: Complemental strand, 10628893 - 10628787
Alignment:
Q  200 acgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccattttta 299  Q
    |||||||||||| |||||| || |||||||||  ||||||||||||  |||||||||||  ||||||||||||| ||||||| ||||| ||| |||||||    
T  10628893 acgagcttatagtttattttactagcttataacttatttttcagacattatttcaagtagcgtttgagcttataacttatcaccttttattctattttta 10628794  T
Q  300 cccttat 306  Q
    || ||||    
T  10628793 cctttat 10628787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 209 - 319
Target Start/End: Original strand, 40719554 - 40719664
Alignment:
Q  209 tagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatca 308  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||  ||||||| ||||||||| |||  |||  || || |||||||||||| |    
T  40719554 tagcttatttcacgagcttataaactatttttcagaagttatttcaagtagcgtttgagtttatagcttctcacttttaatttcagttttacccttatta 40719653  T
Q  309 ttttaattaaa 319  Q
    || ||| ||||    
T  40719654 ttctaactaaa 40719664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 205 - 279
Target Start/End: Complemental strand, 51423043 - 51422969
Alignment:
Q  205 cttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||| ||||||||||||||| ||| |||||| ||||||  |||||||||||||||||||    
T  51423043 cttatagcttatttcacgagtttataaactattttttagaagctattccaagtagcgtttgagcttatagcttat 51422969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 43727094 - 43727171
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||||||||||||| ||||||||||||||||||||||| | |||| ||||||  |||||| ||||||||||||    
T  43727094 gagcttatagcttatttcatgagcttataaactatttttcagaagttattccaagtagcgtttgaacttatagcttat 43727171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 30495257 - 30495153
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacc 301  Q
    ||||||||||||||||||  ||| |||||| |||||||||||| |||||||||||||  |||| |||||||||||| |||  |||  ||||| |||||||    
T  30495257 gagcttatagcttatttctagagtttataagctatttttcagaagctatttcaagtagcgtttcagcttatagcttctcacttttaattccagttttacc 30495158  T
Q  302 cttat 306  Q
    |||||    
T  30495157 cttat 30495153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 16085675 - 16085596
Alignment:
Q  200 acgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||| |||||||  ||||| |||||||||||| |||||||||||| |||||||||||||  |||||||||||||||||||    
T  16085675 acgatcttatagtctattttacgagcttataagctatttttcagatgctatttcaagtagcgtttgagcttatagcttat 16085596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 175 - 319
Target Start/End: Original strand, 46369853 - 46370001
Alignment:
Q  175 ctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatag 274  Q
    ||||||||||||||  || || || | |||||||||||||||||||||||||   || |||||||||||| |||||| ||||||  ||||||||||||||    
T  46369853 ctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagct---aagctatttttcagaagctattccaagtagcgtttgagcttatag 46369949  T
Q  275 ctta-------tcatcttttcttccatttttacccttatcattttaattaaa 319  Q
    ||||       |||  |||||||||| |||||||||||| |||||| |||||    
T  46369950 cttatagcttctcactttttcttccaattttacccttattattttatttaaa 46370001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 177 - 279
Target Start/End: Complemental strand, 42614222 - 42614120
Alignment:
Q  177 ctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagct 276  Q
    ||||||||||||  || || || | |||||| ||||||||||||| ||||||||| |||||||||||| |||||| ||||||  ||||||| ||||||||    
T  42614222 ctgtttggtaacattttttcaccatgagcttctagcttatttcacaagcttataagctatttttcagaagctattccaagtagcgtttgaggttatagct 42614123  T
Q  277 tat 279  Q
    |||    
T  42614122 tat 42614120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 140 - 237
Target Start/End: Complemental strand, 33562019 - 33561922
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatt 237  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||    
T  33562019 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatt 33561922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 200 - 339
Target Start/End: Complemental strand, 46088064 - 46087918
Alignment:
Q  200 acgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttg-------agcttatagcttatcatcttttcttcc 292  Q
    ||||||||||| ||||||||||||| |||||| |||||||||||||| |||| ||||||   ||||       ||||||||||||||||| |||||||||    
T  46088064 acgagcttataacttatttcacgagtttataagctatttttcagacgttattccaagtaatatttgagcttgtagcttatagcttatcattttttcttcc 46087965  T
Q  293 atttttacccttatcattttaattaaaactcacttttaccctttata 339  Q
    | |||||| |||||  |||||  | ||| ||  ||||||||||||||    
T  46087964 aattttactcttattgttttatcttaaattcttttttaccctttata 46087918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 202 - 273
Target Start/End: Complemental strand, 9770035 - 9769964
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    |||||||||||||||||||||||||||||| |||||||||| | |||||| ||| ||  |||||||||||||    
T  9770035 gagcttatagcttatttcacgagcttataagctatttttcaaaagctattccaaataacgtttgagcttata 9769964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 216 - 306
Target Start/End: Original strand, 9169142 - 9169232
Alignment:
Q  216 tttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttat 306  Q
    |||||| | ||||||| |||||||||||| |||||| ||||||  ||||||||||||||||| ||   |||||||||| ||||||||||||    
T  9169142 tttcaccaacttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctccctttttcttccaattttacccttat 9169232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 39583107 - 39583246
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||| |||||||||         |||||||||||||  || || || | ||||||||| ||||||| ||||| |||||| |||||||    
T  39583107 agcttatagcttataagtttgtttgacaaaaaaaattctgtttggtaacactttttcaccatgagcttataacttatttaacgagtttataagctatttt 39583206  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  ||||||| ||||| |||||    
T  39583207 tcagaagctattccaagtagcgtttgagtttataccttat 39583246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 222 - 319
Target Start/End: Original strand, 7024916 - 7025013
Alignment:
Q  222 gagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaattaaa 319  Q
    |||||||||| |||||||||||| |||||| ||||||  ||||||||||||||||| |||  |||  ||||| |||||||||||| ||| ||| ||||    
T  7024916 gagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcacttttaattccagttttacccttattattctaactaaa 7025013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 2479171 - 2479268
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatt 237  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || ||||  | ||| |||||||||||||||||||||||||| |||||    
T  2479171 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacacttttttatcatgagtttatagcttatttcacgagcttataagctatt 2479268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 205 - 279
Target Start/End: Complemental strand, 46929043 - 46928969
Alignment:
Q  205 cttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||| |||||||||||| |||||||||||| ||||||  || ||  ||||| |||||||||||||    
T  46929043 cttatagcttattttacgagcttataagctatttttcagaagctattctaattagcgtttgtgcttatagcttat 46928969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 194 - 279
Target Start/End: Original strand, 912718 - 912803
Alignment:
Q  194 tttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||||||||||| ||||||||| |||||||||  |||||||  |||| ||||||||| ||   |||||||||||| |||||    
T  912718 tttacaacgagcttataacttatttcaggagcttatatcctattttctagacactatttcaaataacatttgagcttataacttat 912803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 220 - 279
Target Start/End: Original strand, 6814118 - 6814177
Alignment:
Q  220 acgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||| |||||||  |||||||||||||||||||||||||  ||||||||||||| |||||    
T  6814118 acgaacttataagttatttttcagacgctatttcaagtagcgtttgagcttataacttat 6814177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 338
Target Start/End: Complemental strand, 31259642 - 31259501
Alignment:
Q  199 aacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatca--tcttttcttccattt 296  Q
    ||||||||||||| |||||||| |||||| ||   ||||||  | ||| |||||||| ||  |||||||||||||||||||||  | |||||||| ||||    
T  31259642 aacgagcttatagtttatttcaggagcttttagcttattttctaaacgttatttcaaatagcgtttgagcttatagcttatcattttttttcttctattt 31259543  T
Q  297 ttacccttatcattttaattaaaactcacttttaccctttat 338  Q
     ||||||| | ||||||  |||||  || |||||||| ||||    
T  31259542 ctacccttgttattttatctaaaatccatttttacccattat 31259501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 223 - 339
Target Start/End: Original strand, 9894931 - 9895054
Alignment:
Q  223 agcttataaactatttttcagacgctatttcaagtatagtttgagc-------ttatagcttatcatcttttcttccatttttacccttatcattttaat 315  Q
    ||||||||| |||||||||||||||||||  |||||  ||||||||       ||||||||| |||| ||||||| || |||||||||||| |||||       
T  9894931 agcttataagctatttttcagacgctattcaaagtagcgtttgagcttatagtttatagcttgtcattttttctttcaattttacccttattattttttg 9895030  T
Q  316 taaaactcacttttaccctttata 339  Q
    ||||| |||  |||||||||||||    
T  9895031 taaaattcatatttaccctttata 9895054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 206 - 279
Target Start/End: Complemental strand, 36379204 - 36379131
Alignment:
Q  206 ttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||| |||||||| ||| ||||||  ||||||||| | |||||| ||||||  |||||||||||||||||||    
T  36379204 ttatagtttatttcatgagtttataagttatttttcaaaagctattccaagtagcgtttgagcttatagcttat 36379131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 226 - 278
Target Start/End: Complemental strand, 40935945 - 40935893
Alignment:
Q  226 ttataaactatttttcagacgctatttcaagtatagtttgagcttatagctta 278  Q
    |||||||||||||||||||  ||||| ||||||  ||||||||||||||||||    
T  40935945 ttataaactatttttcagaaactattccaagtagcgtttgagcttatagctta 40935893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 52071319 - 52071222
Alignment:
Q  113 gggtctgtttggtaagctcactaaatgagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttata 210  Q
    ||||||||||||||||  |   ||||||||||||||||||||||||  ||||||       |||||||||||||| |||| || || |||||||||||    
T  52071319 gggtctgtttggtaagaccctcaaatgagcttatagcttataagctcatttgacaaaaaaagctctgtttggtaatggtttttcaccacgagcttata 52071222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 339
Target Start/End: Original strand, 19715386 - 19715457
Alignment:
Q  268 cttatagcttatcatcttttcttccatttttacccttatcattttaattaaaactcacttttaccctttata 339  Q
    ||||||||||||||| ||| |||||| ||| |||||||| ||||||  ||||| ||  ||||||||||||||    
T  19715386 cttatagcttatcatttttacttccaatttcacccttattattttatctaaaattcttttttaccctttata 19715457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 250
Target Start/End: Complemental strand, 52071233 - 52071202
Alignment:
Q  219 cacgagcttataaactatttttcagacgctat 250  Q
    ||||||||||||||||||||||||||||||||    
T  52071233 cacgagcttataaactatttttcagacgctat 52071202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 262 - 337
Target Start/End: Original strand, 10120698 - 10120774
Alignment:
Q  262 tttgagcttatagcttatca-tcttttcttccatttttacccttatcattttaattaaaactcacttttacccttta 337  Q
    |||||| ||||| ||||||| | |||| || ||| ||||||||||| |||||| |||||| ||| ||||||||||||    
T  10120698 tttgagattataacttatcaattttttatttcatatttacccttattattttatttaaaattcatttttacccttta 10120774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 3e-58; HSPs: 81)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 140 - 339
Target Start/End: Complemental strand, 11100892 - 11100693
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| || ||||       ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||| |||||||    
T  11100892 agcttatagcttataagctcgtctgacaaaaaaagctctgtttggtaacgtctttttacaacgagcttatagcttatttcacgagcttataagctatttt 11100793  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaattaaaactcacttttaccctttata 339  Q
    |||||||||||| ||||||  |||||||||||||||||||||| ||||||||||| ||||||||||| ||||||| |||||| ||  |||||||||||||    
T  11100792 tcagacgctattccaagtagcgtttgagcttatagcttatcattttttcttccatctttacccttattattttaactaaaacccatatttaccctttata 11100693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 174 - 329
Target Start/End: Original strand, 13936233 - 13936388
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||   ||||||||||||    
T  13936233 gctctgtttggtaacggttttttacaacgagcttatagcttatttcatgagcttataagctatttttcagacgctatttcaagtagcatttgagcttata 13936332  T
Q  274 gcttatcatcttttcttccatttttacccttatcattttaattaaaactcactttt 329  Q
    ||||||||  |||| ||||||| |||||||||| |||||||||||||| |||||||    
T  13936333 gcttatcactttttattccattattacccttattattttaattaaaacccactttt 13936388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 113 - 339
Target Start/End: Original strand, 648511 - 648737
Alignment:
Q  113 gggtctgtttggtaagctcactaaatgagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagc 212  Q
    ||||||||||||||||    || ||||||||||||||||||||||| || ||||       |||||||||||||| | || || || | |||||||||||    
T  648511 gggtctgtttggtaagacacctcaatgagcttatagcttataagctcgtctgacaaaaaaagctctgtttggtaatgctttttcaccatgagcttatagc 648610  T
Q  213 ttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcatttt 312  Q
    ||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||||||||||   |||||||||||||||||||||  |||||    
T  648611 ttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttatcaaaatttcttccatttttacccttaatatttt 648710  T
Q  313 aattaaaactcacttttaccctttata 339  Q
    |  |||||  || ||||| ||||||||    
T  648711 atctaaaatccatttttatcctttata 648737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 140 - 311
Target Start/End: Complemental strand, 4221603 - 4221432
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       | |||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  4221603 agcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 4221504  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||| |||||| ||||||  ||||||||||||||||| |||  |||||||||| |||||||||||| ||||    
T  4221503 tcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 4221432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 140 - 311
Target Start/End: Complemental strand, 39246966 - 39246796
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  39246966 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactt-ttcaccatgagcttatagcttatttcacgagcttataagctatttt 39246868  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||| |||||| ||||||  ||||||||||||||||| |||  |||||||||| |||||| ||||| ||||    
T  39246867 tcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacacttattattt 39246796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 139 - 279
Target Start/End: Original strand, 43402450 - 43402590
Alignment:
Q  139 gagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactattt 238  Q
    |||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| ||||||    
T  43402450 gagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctattt 43402549  T
Q  239 ttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||| | |||||||||||||  |||||||||||||||||||    
T  43402550 ttcaaaagctatttcaagtagcgtttgagcttatagcttat 43402590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 311
Target Start/End: Original strand, 2671421 - 2671592
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||| ||||||||| |||||||    
T  2671421 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacaagcttataagctatttt 2671520  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||| |||||| ||||||  ||||||||||||||||| ||   ||||||| || |||||||||||| ||||    
T  2671521 tcagaagctattccaagtagcgtttgagcttatagcttctcgctttttctttcaattttacccttattattt 2671592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 12774583 - 12774722
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  12774583 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 12774682  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  12774683 tcagaagctattccaagtagcgtttgagcttatagcttat 12774722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 14647487 - 14647348
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  14647487 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 14647388  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  14647387 tcagaagctattccaagtagcgtttgagcttatagcttat 14647348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 24793979 - 24794118
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  24793979 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 24794078  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  24794079 tcagaagctattccaagtagcgtttgagcttatagcttat 24794118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 30299705 - 30299844
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  30299705 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 30299804  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  30299805 tcagaagctattccaagtagcgtttgagcttatagcttat 30299844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 13228602 - 13228464
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || ||||| | |||||||||||||||||||||||||||||| |||||||    
T  13228602 agcttatagcttataagctcgtttgacaaaaaa-gctctgtttggtaacacttttttaccatgagcttatagcttatttcacgagcttataagctatttt 13228504  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  13228503 tcagaagctattccaagtagcgtttgagcttatagcttat 13228464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 113 - 279
Target Start/End: Original strand, 15530415 - 15530581
Alignment:
Q  113 gggtctgtttggtaagctcactaaatgagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagc 212  Q
    |||||||||||| || || |  ||| |||||||||||||||||||| |||||||        || |||||||||||  || || || | |||||||||||    
T  15530415 gggtctgtttgggaaactaaaaaaaagagcttatagcttataagctcgtttgacaaaaaaaactatgtttggtaacactttttcaccatgagcttatagc 15530514  T
Q  213 ttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||  |||||||||||||||||||    
T  15530515 ttatttcacgagcttataaactatttttcagaagctattccaagtagcgtttgagcttatagcttat 15530581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 36685825 - 36685962
Alignment:
Q  142 cttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttc 241  Q
    ||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||||    
T  36685825 cttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttttc 36685924  T
Q  242 agacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||| |||||| ||||||  |||||||||||||||||||    
T  36685925 agaagctattccaagtagcgtttgagcttatagcttat 36685962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 139 - 279
Target Start/End: Complemental strand, 36028122 - 36027982
Alignment:
Q  139 gagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactattt 238  Q
    ||||||||||||||||||||||||||||        ||||||||||||||  || || || | ||||||||||||||||| |||||||||||| ||||||    
T  36028122 gagcttatagcttataagcttgtttgacaaaaaaaactctgtttggtaacactttttcaccatgagcttatagcttattttacgagcttataagctattt 36028023  T
Q  239 ttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||| |||||||||||||  ||||||||||||| |||||    
T  36028022 ttcagaagctatttcaagtagcgtttgagcttataacttat 36027982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 2236646 - 2236507
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||        ||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  2236646 agcttatagcttataagctcgtttgacaaaaaaaactctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 2236547  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  2236546 tcagaagctattccaagtagcgtttgagcttatagcttat 2236507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 5998024 - 5997885
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || ||   |||||||||||||||||||||||||||||| |||||||    
T  5998024 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccgtgagcttatagcttatttcacgagcttataagctatttt 5997925  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  5997924 tcagaagctattccaagtagcgtttgagcttatagcttat 5997885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 6604040 - 6603901
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||| | |||||||       |||||||||||||||  || || ||   |||||||||||||||||||||||||||||| |||||||    
T  6604040 agcttatagcttataagttcgtttgacaaaaaaagctctgtttggtaacattttttcaccgtgagcttatagcttatttcacgagcttataagctatttt 6603941  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||||||||||  |||||||||||||||||||    
T  6603940 tcagaagctatttcaagtagcgtttgagcttatagcttat 6603901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 8024114 - 8023975
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||| | |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  8024114 agcttatagcttataagttcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 8024015  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  8024014 tcagaagctattccaagtagcgtttgagcttatagcttat 8023975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 12713319 - 12713458
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  12713319 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 12713418  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||   ||||||||||||||||||    
T  12713419 tcagaagctattccaagtagcatttgagcttatagcttat 12713458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 30412742 - 30412603
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | ||| |||||||||||||||||||||||||| |||||||    
T  30412742 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagtttatagcttatttcacgagcttataagctatttt 30412643  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  30412642 tcagaagctattccaagtagcgtttgagcttatagcttat 30412603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 32381804 - 32381665
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    |||||||||||||||||||||||||||        || |||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  32381804 agcttatagcttataagcttgtttgacaaaaaaaactatgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 32381705  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  32381704 tcagaagctattccaagtagcgtttgagcttatagcttat 32381665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 39744672 - 39744533
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       ||||||||| |||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  39744672 agcttatagcttataagctcgtttgacaaaaaaagctctgttttgtaacattttttcaccatgagcttatagcttatttcacgagcttataagctatttt 39744573  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  39744572 tcagaagctattccaagtagcgtttgagcttatagcttat 39744533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 202 - 311
Target Start/End: Complemental strand, 9587254 - 9587145
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacc 301  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  ||||||||||||||||| |||  |||| ||||| |||||||    
T  9587254 gagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttattccaattttacc 9587155  T
Q  302 cttatcattt 311  Q
    ||||| ||||    
T  9587154 cttattattt 9587145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 140 - 313
Target Start/End: Original strand, 16474778 - 16474958
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    |||||||||||||||| || |||||||       |||||||||||||| |||   |||| |||||||||||| |||||||||||| |||||| |||||||    
T  16474778 agcttatagcttataaactcgtttgacaaaaatagctctgtttggtaatggtctcttaccacgagcttatagtttatttcacgagattataagctatttt 16474877  T
Q  240 tcagacgctatttcaagtatagtttg-------agcttatagcttatcatcttttcttccatttttacccttatcatttta 313  Q
    | ||| |||||| ||||||  |||||       ||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  16474878 ttagaagctattccaagtagcgtttgagcttatagcttatagcttatcatcttttcttccatttatacccttattatttta 16474958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 174 - 311
Target Start/End: Complemental strand, 29392203 - 29392066
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    |||||||||||||||  || ||||| | |||||||||||||||||||||||||||||| |||||||| | | |||||| ||| ||  |||||||||||||    
T  29392203 gctctgtttggtaacacttttttaccatgagcttatagcttatttcacgagcttataagctattttttaaaagctattccaaatagcgtttgagcttata 29392104  T
Q  274 gcttatcatcttttcttccatttttacccttatcattt 311  Q
    |||| |||  |||||||||| |||||||||||| ||||    
T  29392103 gcttctcactttttcttccaattttacccttattattt 29392066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 174 - 306
Target Start/End: Complemental strand, 6893475 - 6893343
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    |||||||||||||||  || ||||| | |||||||||||||||||||||||||||||||||| |||||||| | |||| ||||||  |||||||||||||    
T  6893475 gctctgtttggtaacacttttttaccatgagcttatagcttatttcacgagcttataaactagttttcagaagttattccaagtagcgtttgagcttata 6893376  T
Q  274 gcttatcatcttttcttccatttttacccttat 306  Q
    |||| |||| |||  ||| | ||||||||||||    
T  6893375 gcttctcatttttaattctagttttacccttat 6893343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 175 - 279
Target Start/End: Original strand, 7651682 - 7651786
Alignment:
Q  175 ctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatag 274  Q
    ||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||  ||||||||||||||    
T  7651682 ctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataatctatttttcagaagctatttcaagtagtgtttgagcttatag 7651781  T
Q  275 cttat 279  Q
    |||||    
T  7651782 cttat 7651786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 142 - 311
Target Start/End: Complemental strand, 13157014 - 13156845
Alignment:
Q  142 cttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttc 241  Q
    ||||||||||||||| |||||||||       |||||||||||||||  || || || |  | |||||||||||||||||||| |||||| |||||||||    
T  13157014 cttatagcttataagtttgtttgacaaaaaaagctctgtttggtaacactttttcaccattaacttatagcttatttcacgagtttataagctatttttc 13156915  T
Q  242 agacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||| |||||| ||||||   |||||||||||||||| |||  |||||||||| |||||||||||| ||||    
T  13156914 agaagctattccaagtagcttttgagcttatagcttctcactttttcttccaattttacccttattattt 13156845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 39275432 - 39275569
Alignment:
Q  142 cttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttc 241  Q
    ||||||||||||||||| |||||||       | |||||||||||||  || ||||| | |||||||||||||||||||||||||||||| ||||||||     
T  39275432 cttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacacttttttaccatgagcttatagcttatttcacgagcttataagctatttttt 39275531  T
Q  242 agacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||| |||||| ||||||  |||||||||||||||||||    
T  39275532 agaagctattccaagtagcgtttgagcttatagcttat 39275569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 1174791 - 1174930
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||| ||       | |||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  1174791 agcttatagcttataagctcgtttcacaaaaaaagttctgtttggtaacactttttgaccatgagcttatagcttatttcacgagcttataagctatttt 1174890  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  1174891 tcagaagctattccaagtagcgtttgagcttatagcttat 1174930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 1711333 - 1711194
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | ||||||||| |||||||||| ||||||||| |||||||    
T  1711333 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttataacttatttcacaagcttataagctatttt 1711234  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  1711233 tcagaagctattccaagtagcgtttgagcttatagcttat 1711194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 5591595 - 5591734
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       | |||||||||||||  || || || | |||||||||||||||||||||| ||||||| |||||||    
T  5591595 agcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttatttcacgaacttataagctatttt 5591694  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  5591695 tcagaagctattccaagtagcgtttgagcttatagcttat 5591734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 9160822 - 9160683
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||| || |||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  9160822 agcttttaacttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 9160723  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  9160722 tcagaagctattccaagtagcgtttgagcttatagcttat 9160683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 10697276 - 10697415
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    |||||||||||||||||||  ||| ||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  10697276 agcttatagcttataagctcatttcacaaaaaaagctctgtttggtaacactttttgaccatgagcttatagcttatttcacgagcttataagctatttt 10697375  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  10697376 tcagaagctattccaagtagtgtttgagcttatagcttat 10697415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 26699236 - 26699097
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||| ||||||||| |||||||       |||||||||||||||  || || || | ||||||||||||||||||| |||||||||| |||||||    
T  26699236 agcttataggttataagctcgtttgacaaataaagctctgtttggtaacactttttcaccatgagcttatagcttatttcatgagcttataagctatttt 26699137  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  26699136 tcagaggctattccaagtagcgtttgagcttatagcttat 26699097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 26968969 - 26968830
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||| ||||||||| |||||||       |||||||||||||||  || || || | ||||||||||||||||||| |||||||||| |||||||    
T  26968969 agcttataggttataagctcgtttgacaaataaagctctgtttggtaacactttttcaccatgagcttatagcttatttcatgagcttataagctatttt 26968870  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  26968869 tcagaggctattccaagtagcgtttgagcttatagcttat 26968830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 27130340 - 27130479
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    |||||||||||||||||||  ||||||        ||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  27130340 agcttatagcttataagctcttttgacaaaaaaaactctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 27130439  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  27130440 tcagaagctattccaagtagcgtttgagcttatagcttat 27130479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 32382856 - 32382995
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| ||||||        | |||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  32382856 agcttatagcttataagctcgtttgataaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 32382955  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  32382956 tcagaagctattccaagtagcgtttgagcttatagcttat 32382995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 35235857 - 35235718
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||| ||||||||||||| |||||||        ||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  35235857 agcttttagcttataagctcgtttgacaaaaaaaactctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 35235758  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  35235757 tcagaagctattccaagtagcgtttgagcttatagcttat 35235718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 5382073 - 5381935
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || ||||||||||| ||||||||| |||||||||| |||||||    
T  5382073 agcttatagcttataagctcgtttgacaaaaaa-gctctgtttggtaacactttttcaccacgagcttataacttatttcatgagcttataagctatttt 5381975  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  5381974 tcagaagctattccaagtagcgtttgagcttatagcttat 5381935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 194 - 339
Target Start/End: Original strand, 13921786 - 13921930
Alignment:
Q  194 tttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttcca 293  Q
    ||||| |||| |||||| ||||||||||||||||| || ||||||||||||||||||||||||||  |||||| |||||| |||||||| |||||||| |    
T  13921786 tttaccacgaacttataacttatttcacgagcttaaaagctatttttcagacgctatttcaagtagcgtttgaacttataacttatcattttttcttcta 13921885  T
Q  294 tttttacccttatcattttaattaaaactcacttttaccctttata 339  Q
     ||||| ||||||  |||||  ||||| ||  ||||||||||||||    
T  13921886 attttatccttattgttttatctaaaattc-tttttaccctttata 13921930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 19347747 - 19347852
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    ||||||||||||||   || ||||| | |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||    
T  19347747 gctctgtttggtaatacttttttaccatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttata 19347846  T
Q  274 gcttat 279  Q
    ||||||    
T  19347847 gcttat 19347852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 35236763 - 35236658
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||    
T  35236763 gctctgtttggtaacactttttgaccatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttata 35236664  T
Q  274 gcttat 279  Q
    ||||||    
T  35236663 gcttat 35236658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 175 - 279
Target Start/End: Original strand, 4379300 - 4379404
Alignment:
Q  175 ctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatag 274  Q
    ||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||  |||||||||||||     
T  4379300 ctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttataa 4379399  T
Q  275 cttat 279  Q
    |||||    
T  4379400 cttat 4379404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 140 - 277
Target Start/End: Complemental strand, 30774322 - 30774185
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||| ||       |||||||||||||||  || || || |  ||||||||||||||||||||||||||||| |||||||    
T  30774322 agcttatagcttataagctcgtttcacaaaaaaagctctgtttggtaacactttttgaccataagcttatagcttatttcacgagcttataagctatttt 30774223  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagctt 277  Q
    ||||| |||||| ||||||  |||||||||||||||||    
T  30774222 tcagaagctattccaagtagcgtttgagcttatagctt 30774185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 19956437 - 19956299
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||| ||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| ||| |||    
T  19956437 agcttatagcttataagctcgtttaacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagcta-ttt 19956339  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  19956338 tcagaagctattccaagtagcgtttgagcttatagcttat 19956299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 174 - 311
Target Start/End: Original strand, 3669582 - 3669719
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    |||||||||||||||  || ||||| |  | ||| |||||||||||| |||||||||| |||||||||||| ||||||  |||||  |||||||||||||    
T  3669582 gctctgtttggtaacacttttttaccataaacttgtagcttatttcatgagcttataagctatttttcagaagctattcaaagtagcgtttgagcttata 3669681  T
Q  274 gcttatcatcttttcttccatttttacccttatcattt 311  Q
    |||| |||  |||||||||| |||||||||||| ||||    
T  3669682 gcttctcactttttcttccaattttacccttattattt 3669719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 15443525 - 15443602
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||  |||||||||||||||||||    
T  15443525 gagcttatagcttatttcacgagcttataaactatttttcagaagctattccaaatagcgtttgagcttatagcttat 15443602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 31169055 - 31168978
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||||||||    
T  31169055 gagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 31168978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 175 - 279
Target Start/End: Original strand, 2178802 - 2178906
Alignment:
Q  175 ctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatag 274  Q
    ||||||||||||||  || || || | ||||||||||||||||||||||| |||||| |||||||||||| |||||| ||||||  ||||||||||||||    
T  2178802 ctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagtttataagctatttttcagaagctattccaagtagcgtttgagcttatag 2178901  T
Q  275 cttat 279  Q
    |||||    
T  2178902 cttat 2178906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 139 - 340
Target Start/End: Original strand, 2497569 - 2497770
Alignment:
Q  139 gagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactattt 238  Q
    |||||||||||||||||||| || | ||       ||||| |||||||| | || || || | ||| ||||| ||||||||||||||||||||  |||||    
T  2497569 gagcttatagcttataagctcgtctaacaaaaaatgctctatttggtaatgctttttcaccatgagattataacttatttcacgagcttataagttattt 2497668  T
Q  239 ttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaattaaaactcacttttaccctttat 338  Q
    |||| | ||||||  || ||  ||||||||||||| ||||||||||||| ||  ||||||||| |||| ||||||||||||   ||||||||||||| ||    
T  2497669 ttcaaaagctattctaaatagcgtttgagcttataacttatcatcttttattaaatttttaccgttattattttaattaaattccacttttacccttaat 2497768  T
Q  339 at 340  Q
    ||    
T  2497769 at 2497770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 3037553 - 3037416
Alignment:
Q  142 cttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttc 241  Q
    ||||||||||||||||||||||||        | | |||||||||||  || ||||| | ||| |||||||||||||||||||||||||| |||||||||    
T  3037553 cttatagcttataagcttgtttgataaaaaaaggtatgtttggtaacacttttttaccatgagtttatagcttatttcacgagcttataagctatttttc 3037454  T
Q  242 agacgctatttcaagtatagtttgagcttatagcttat 279  Q
    | | |||||| ||||||  |||||||||||||||||||    
T  3037453 aaaagctattccaagtagcgtttgagcttatagcttat 3037416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 175 - 279
Target Start/End: Original strand, 3670320 - 3670424
Alignment:
Q  175 ctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatag 274  Q
    ||||||||||||||  || || || | | |||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  ||||||||||||||    
T  3670320 ctctgtttggtaacactttttgaccatgcgcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatag 3670419  T
Q  275 cttat 279  Q
    |||||    
T  3670420 cttat 3670424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 139 - 279
Target Start/End: Original strand, 5521304 - 5521444
Alignment:
Q  139 gagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactattt 238  Q
    |||||||||||||||||||| |||||||         |||||||||||||  || || || | |||||||||||||||||||||||||||||| ||||||    
T  5521304 gagcttatagcttataagctcgtttgacaaaaaaaattctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctattt 5521403  T
Q  239 ttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||| ||||||  |||||  ||||||| |||||||||||    
T  5521404 ttcagaagctattctaagtagcgtttgagtttatagcttat 5521444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 176 - 279
Target Start/End: Complemental strand, 12363706 - 12363603
Alignment:
Q  176 tctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc 275  Q
    |||||||||||||  || || || | ||||||||| |||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||||    
T  12363706 tctgtttggtaacactttttcaccatgagcttataacttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagc 12363607  T
Q  276 ttat 279  Q
    ||||    
T  12363606 ttat 12363603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 199 - 302
Target Start/End: Complemental strand, 32321733 - 32321630
Alignment:
Q  199 aacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccattttt 298  Q
    ||||||||||||||||||||||||| |||| ||  |||||||||||| ||||||||| ||  ||||||||||||||||||| || |||| |||||| |||    
T  32321733 aacgagcttatagcttatttcacgaacttacaacttatttttcagactctatttcaaataacgtttgagcttatagcttataattttttattccatattt 32321634  T
Q  299 accc 302  Q
    ||||    
T  32321633 accc 32321630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 219 - 332
Target Start/End: Original strand, 7896599 - 7896711
Alignment:
Q  219 cacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaattaa 318  Q
    ||||||||||||| ||||||| || |||||||||||| ||  ||||||| ||||||||||| ||||||||||| |||||||||||||| ||||||  |||    
T  7896599 cacgagcttataagctatttt-caaacgctatttcaaatagcgtttgagtttatagcttataatcttttcttctatttttacccttattattttatctaa 7896697  T
Q  319 aactcacttttacc 332  Q
    || ||| |||||||    
T  7896698 aattcaattttacc 7896711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 19525818 - 19525895
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||| |||| |  |||||||||||||||||||    
T  19525818 gagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagcagcgtttgagcttatagcttat 19525895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 22977273 - 22977196
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||||||||||||| ||||||||||||||||||||| | |||||| ||||||  |||||||||||||||||||    
T  22977273 gagcttatagcttatttcatgagcttataaactatttttcataagctattccaagtagcgtttgagcttatagcttat 22977196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 206 - 279
Target Start/End: Original strand, 35640013 - 35640086
Alignment:
Q  206 ttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||||||||    
T  35640013 ttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 35640086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 194 - 335
Target Start/End: Complemental strand, 9627230 - 9627082
Alignment:
Q  194 tttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagctta-------tcatcttt 286  Q
    ||||||| |||||||||||||||||||  ||||||||| |||||||||||| |||| ||||||||  ||||||||||||| ||||       |||  |||    
T  9627230 tttacaatgagcttatagcttatttcagaagcttataagctatttttcagaagctacttcaagtagcgtttgagcttataacttatagtgtctcactttt 9627131  T
Q  287 tcttccatttttacccttatcattttaattaaaactcacttttaccctt 335  Q
      ||||| |||||| ||||| |||||||||||||  |||||||||||||    
T  9627130 aattccaattttactcttattattttaattaaaatccacttttaccctt 9627082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 11664021 - 11663882
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||| ||       |||||||||||||||  || || || |  || ||||||||||||||||||||||||||  ||||||    
T  11664021 agcttatagcttataagctcgtttcacaaaaaaagctctgtttggtaacactttttgaccataagtttatagcttatttcacgagcttataagttatttt 11663922  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| ||||||  |||||  |||||||||||||||||||    
T  11663921 tcagaagctattctaagtagcgtttgagcttatagcttat 11663882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 220 - 339
Target Start/End: Complemental strand, 28812466 - 28812345
Alignment:
Q  220 acgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatc--ttttcttccatttttacccttatcattttaatta 317  Q
    ||||| ||||||  ||||||||||||||||||| || ||  ||||||||||||| ||||||||   |||||||||||||| |||| ||||||||||||||    
T  28812466 acgagattataacttatttttcagacgctatttaaaataacgtttgagcttataacttatcattatttttcttccattttaacccatatcattttaatta 28812367  T
Q  318 aaactcacttttaccctttata 339  Q
    ||||| |  |||||| ||||||    
T  28812366 aaacttatgtttaccttttata 28812345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 11063003 - 11062898
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    |||||||||||||||  || || || | ||||||||| ||||||||| |||||||||| |||||||||||| |||||| ||||||  |||||||||||||    
T  11063003 gctctgtttggtaacactttttcaccatgagcttataacttatttcatgagcttataagctatttttcagaagctattccaagtagcgtttgagcttata 11062904  T
Q  274 gcttat 279  Q
    | ||||    
T  11062903 gtttat 11062898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 27005924 - 27005845
Alignment:
Q  200 acgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||| |||||||||||||||| ||||||||||  |||||| || |||||||||||||||  |||||||||||||||||||    
T  27005924 acgaacttatagcttatttcaagagcttataacttattttccaaacgctatttcaagtaacgtttgagcttatagcttat 27005845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 225 - 311
Target Start/End: Complemental strand, 25872273 - 25872187
Alignment:
Q  225 cttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    |||||||  ||||||||||| |||||| |||||| |||||||||||||||||| ||| ||||||||| | |||||||||||| ||||    
T  25872273 cttataatttatttttcagaagctattccaagtagagtttgagcttatagcttctcaccttttcttctaattttacccttattattt 25872187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 202 - 271
Target Start/End: Original strand, 23920526 - 23920595
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagctta 271  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||  |||||| ||||    
T  23920526 gagcttatagtttatttcacgagcttataagctatttttcagacgctattccaagtagtgtttgaactta 23920595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 174 - 294
Target Start/End: Complemental strand, 41472006 - 41471885
Alignment:
Q  174 gctctgtttggtaacggttgttt-acaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttat 272  Q
    ||||||||||||||| ||  ||| ||||| | ||| |||||||||||| |||||| ||   |||||| ||||||||||||||| ||  ||||||||||||    
T  41472006 gctctgtttggtaacagtcttttcacaacaaacttgtagcttatttcaggagcttttagcttattttccagacgctatttcaaatagtgtttgagcttat 41471907  T
Q  273 agcttatcatcttttcttccat 294  Q
    ||||||| || |||||||||||    
T  41471906 agcttattattttttcttccat 41471885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 4657652 - 4657592
Alignment:
Q  219 cacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||||||| ||||||||||||  |||||||||||| ||||||||||||||||||||    
T  4657652 cacgagcttataagctatttttcagaaactatttcaagtagagtttgagcttatagcttat 4657592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 219 - 279
Target Start/End: Original strand, 6349426 - 6349486
Alignment:
Q  219 cacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||||||||||||||||  |||||  |||||||||||||||||||    
T  6349426 cacgagcttataaactatttttcagacgctattctaagtagcgtttgagcttatagcttat 6349486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 206 - 336
Target Start/End: Original strand, 11780118 - 11780248
Alignment:
Q  206 ttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttaccctta 305  Q
    ||||||||| ||||  ||||||||||||||||||| ||||  ||||| |||||  |||||||||||||| |||| || |||| |  ||||||||||||||    
T  11780118 ttatagcttttttcgtgagcttataaactattttttagactttattttaagtaacgtttgagcttatagtttataattttttgtctcatttttaccctta 11780217  T
Q  306 tcattttaattaaaactcacttttacccttt 336  Q
    | | ||||| |||||  |  |||||||||||    
T  11780218 ttactttaactaaaatccgattttacccttt 11780248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 335
Target Start/End: Complemental strand, 18480638 - 18480497
Alignment:
Q  194 tttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttcca 293  Q
    ||||| ||||||||||| |||||||||| ||||||||   ||||||| ||||||||| |||||||   |||||||||||||| | |||  |||  || ||    
T  18480638 tttactacgagcttatatcttatttcacaagcttatagtttattttttagacgctatctcaagtagcatttgagcttatagcgtctcacttttaatttca 18480539  T
Q  294 tttttacccttatcattttaattaaaactcacttttaccctt 335  Q
     ||||| |||||| |||||||| | ||  |||||||||||||    
T  18480538 gttttatccttattattttaatgacaatccacttttaccctt 18480497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 234 - 338
Target Start/End: Original strand, 813769 - 813871
Alignment:
Q  234 tatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaattaaaactcacttttaccc 333  Q
    ||||||||| |||||||||||||||  |||| | |||||| ||||| || |||||||||| ||||||||||||||| |||||||||| | |  |||||||    
T  813769 tatttttcatacgctatttcaagtag-gtttaaacttataacttat-attttttcttccaattttacccttatcatattaattaaaatttatgtttaccc 813866  T
Q  334 tttat 338  Q
    |||||    
T  813867 tttat 813871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 205 - 279
Target Start/End: Complemental strand, 42323672 - 42323598
Alignment:
Q  205 cttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||| | ||||| ||||| |||||| |||||||||||||||||||  |||||  |||||||||||||||||||    
T  42323672 cttataacatattttacgagtttataagctatttttcagacgctattctaagtagtgtttgagcttatagcttat 42323598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 6280523 - 6280446
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||| |||||||||| | ||||||||||||||||| | | |||||||||||   ||| ||||||||||||||    
T  6280523 gagcttatagtttatttcacgggtttataaactatttttcataagttatttcaagtagcatttaagcttatagcttat 6280446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 178 - 279
Target Start/End: Original strand, 4875689 - 4875790
Alignment:
Q  178 tgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagctt 277  Q
    |||||||||||  || ||||| ||||| |||||| |||||| | ||| |||||| |||||||| | | ||||||  |||||  |||||||||||||||||    
T  4875689 tgtttggtaacatttttttactacgagtttatagtttattttaggagtttataagctattttttaaaagctattcaaagtagcgtttgagcttatagctt 4875788  T
Q  278 at 279  Q
    ||    
T  4875789 at 4875790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 166
Target Start/End: Complemental strand, 4657721 - 4657686
Alignment:
Q  131 cactaaatgagcttatagcttataagcttgtttgac 166  Q
    |||||||||||||||||||||||||||| |||||||    
T  4657721 cactaaatgagcttatagcttataagctcgtttgac 4657686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 251
Target Start/End: Original strand, 31408001 - 31408040
Alignment:
Q  212 cttatttcacgagcttataaactatttttcagacgctatt 251  Q
    |||||||||||||||||||| |||||| ||||||||||||    
T  31408001 cttatttcacgagcttataagctatttgtcagacgctatt 31408040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 8638273 - 8638229
Alignment:
Q  261 gtttgagcttatagcttatcatcttttcttccatttttaccctta 305  Q
    |||||| ||||||||||||||| ||||||| ||||||||| ||||    
T  8638273 gtttgaacttatagcttatcattttttctttcatttttactctta 8638229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 234 - 278
Target Start/End: Complemental strand, 41686823 - 41686779
Alignment:
Q  234 tatttttcagacgctatttcaagtatagtttgagcttatagctta 278  Q
    ||||||||| ||||||||| |||||  ||||||||||||||||||    
T  41686823 tatttttcaaacgctattttaagtagtgtttgagcttatagctta 41686779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 3e-43; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 113 - 306
Target Start/End: Original strand, 46757691 - 46757884
Alignment:
Q  113 gggtctgtttggtaagctcactaaatgagcttatagcttataagcttgtttgacnnnnnnn-gctctgtttggtaacggttgtttacaacgagcttatag 211  Q
    ||||||| ||||||| ||| | ||| |||||||||||||||||||| || ||||        |||||||||||||||| || |||||||||||||||||     
T  46757691 gggtctgattggtaa-ctcccaaaaagagcttatagcttataagctcgtctgacaaaaaaaagctctgtttggtaacgcttttttacaacgagcttataa 46757789  T
Q  212 cttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttat 306  Q
    ||||||||| |||||||||| |||||||||||| |||| ||||||||  |||||||||||||||||||||| |||||||||||||||| ||||||    
T  46757790 cttatttcatgagcttataagctatttttcagaagctacttcaagtagcgtttgagcttatagcttatcatattttcttccatttttatccttat 46757884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 140 - 306
Target Start/End: Original strand, 1342784 - 1342957
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| || ||||       |||||||||||||||| || |||||||||||||||||||||||||||  ||||||||| |||||||    
T  1342784 agcttatagcttataagctcgtctgacaaaaaaagctctgtttggtaacgcttttttacaacgagcttatagcttatttcagaagcttataagctatttt 1342883  T
Q  240 tcagacgctatttcaagtatagtttgagct-------tatagcttatcatcttttcttccatttttacccttat 306  Q
    ||||| |||| ||||||||  |||||||||       ||||||||||||| |||||||||||||||| ||||||    
T  1342884 tcagaagctacttcaagtagcgtttgagcttatagcttatagcttatcatgttttcttccatttttatccttat 1342957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 176 - 306
Target Start/End: Complemental strand, 22642362 - 22642232
Alignment:
Q  176 tctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc 275  Q
    ||||||||||||||||| || || ||||||||||||||||||||||||| |||||| |||||||| | ||||||||  |||||   ||||||||||||||    
T  22642362 tctgtttggtaacggtttttcaccacgagcttatagcttatttcacgagtttataagctattttttaaacgctattctaagtagcatttgagcttatagc 22642263  T
Q  276 ttatcatcttttcttccatttttacccttat 306  Q
    ||||||| |||||||| ||||||||||||||    
T  22642262 ttatcatattttcttctatttttacccttat 22642232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 140 - 311
Target Start/End: Complemental strand, 42375929 - 42375759
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||        ||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  42375929 agcttatagcttataagctcgtttgacaaaaaaa-ctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 42375831  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||| |||||| ||||||  ||||||||||||||||| |||  |||||||||| |||||||||||| ||||    
T  42375830 tcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 42375759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 21254842 - 21254705
Alignment:
Q  142 cttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttc 241  Q
    ||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||||    
T  21254842 cttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcactatgagcttatagcttatttcacgagcttataagctatttttc 21254743  T
Q  242 agacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||| |||||||||||||  |||||||||||||||||||    
T  21254742 agaagctatttcaagtagcgtttgagcttatagcttat 21254705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 139 - 311
Target Start/End: Complemental strand, 19832138 - 19831966
Alignment:
Q  139 gagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactattt 238  Q
    |||||| ||||||||||||| ||||||        |||||||||||||||  || || || | |||||||||||||||||||||||||||||| ||||||    
T  19832138 gagcttttagcttataagctcgtttgataaaaaaagctctgtttggtaacattttttcaccatgagcttatagcttatttcacgagcttataagctattt 19832039  T
Q  239 ttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    |||| | |||||| ||||||  ||||||||||||||||| |||  |||||||||| |||||||||||| ||||    
T  19832038 ttcaaaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 19831966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 36246523 - 36246384
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  36246523 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 36246424  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  36246423 tcagaagctattccaagtagcgtttgagcttatagcttat 36246384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 42587530 - 42587391
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  42587530 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 42587431  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  42587430 tcagaagctattccaagtagcgtttgagcttatagcttat 42587391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 43254111 - 43254250
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  43254111 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 43254210  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  43254211 tcagaagctattccaagtagcgtttgagcttatagcttat 43254250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 45687063 - 45686924
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  45687063 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 45686964  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  45686963 tcagaagctattccaagtagcgtttgagcttatagcttat 45686924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 206 - 311
Target Start/End: Complemental strand, 17192523 - 17192418
Alignment:
Q  206 ttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttaccctta 305  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||  ||||||||||||||||| |||  |||||||||| |||||||||||    
T  17192523 ttatagcttatttcacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttatagcttctcactttttcttccaattttaccctta 17192424  T
Q  306 tcattt 311  Q
    | ||||    
T  17192423 ttattt 17192418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 46879637 - 46879532
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    ||||||| |||||||| || ||||||||||||||||||||||||||| |||||||||| |||||||||||| |||| ||||||||  |||||||||||||    
T  46879637 gctctgtctggtaacgcttttttacaacgagcttatagcttatttcaggagcttataagctatttttcagaagctacttcaagtagcgtttgagcttata 46879538  T
Q  274 gcttat 279  Q
    ||||||    
T  46879537 gcttat 46879532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 202 - 311
Target Start/End: Complemental strand, 47587190 - 47587081
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacc 301  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  ||||||||||||||||| |||  |||||||||| |||||||    
T  47587190 gagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacc 47587091  T
Q  302 cttatcattt 311  Q
    ||||| ||||    
T  47587090 cttattattt 47587081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 9487415 - 9487554
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| || ||||       | |||||||||||||  || ||||| | |||||||||||||||||||||||||||||| |||||||    
T  9487415 agcttatagcttataagctcgtctgacaaaaaaagttctgtttggtaacacttttttactatgagcttatagcttatttcacgagcttataagctatttt 9487514  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  9487515 tcagaagctattccaagtagcgtttgagcttatagcttat 9487554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 10312176 - 10312037
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  10312176 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 10312077  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  ||||||||||||| |||||    
T  10312076 tcagaagctattccaagtagcgtttgagcttatatcttat 10312037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 21374641 - 21374780
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    |||||||||||||||||||||||||||         |||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  21374641 agcttatagcttataagcttgtttgacaaaaaaaattctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 21374740  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  21374741 tcagaagctattccaagtagcgtttgagcttatagcttat 21374780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 27089803 - 27089664
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  27089803 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 27089704  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||| ||  |||||||||||||||||||    
T  27089703 tcagaagctattccaaatagcgtttgagcttatagcttat 27089664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 27188498 - 27188637
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  27188498 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 27188597  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||| ||  |||||||||||||||||||    
T  27188598 tcagaagctattccaaatagcgtttgagcttatagcttat 27188637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 31511308 - 31511447
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||        ||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  31511308 agcttatagcttataagctcgtttgacaaaaaaaactctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 31511407  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  31511408 tcagaagctattccaagtagcgtttgagcttatagcttat 31511447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 40258865 - 40259004
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    |||||||||||||||||||||||||||       ||| |||||||||||  || || || | ||||||||| |||||||||||||||||||| |||||||    
T  40258865 agcttatagcttataagcttgtttgacagaaaaagctatgtttggtaacactttttcaccatgagcttataacttatttcacgagcttataagctatttt 40258964  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  40258965 tcagaagctattccaagtagcgtttgagcttatagcttat 40259004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 174 - 311
Target Start/End: Complemental strand, 21313902 - 21313765
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    |||||||||||||||  || || || | |||||||||||||||||||| ||||||||| |||||||||| | |||||| ||||||  |||||||||||||    
T  21313902 gctctgtttggtaacactttttcaccatgagcttatagcttatttcacaagcttataagctatttttcaaaagctattccaagtagcgtttgagcttata 21313803  T
Q  274 gcttatcatcttttcttccatttttacccttatcattt 311  Q
    |||| |||  |||||||||| |||||||||||| ||||    
T  21313802 gcttctcactttttcttccaattttacccttattattt 21313765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 202 - 306
Target Start/End: Original strand, 35000782 - 35000886
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacc 301  Q
    |||||||||||||||||||| || ||||||||||||||||||| |||||| ||||||  |||||||||||||||||||  | |||||||||| |||||||    
T  35000782 gagcttatagcttatttcacaagtttataaactatttttcagatgctattccaagtagcgtttgagcttatagcttattgttttttcttccacttttacc 35000881  T
Q  302 cttat 306  Q
    |||||    
T  35000882 cttat 35000886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 146 - 279
Target Start/End: Complemental strand, 40106146 - 40106013
Alignment:
Q  146 tagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagac 245  Q
    ||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||||||||||||||||     
T  40106146 tagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataaactatttttcagaa 40106047  T
Q  246 gctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||| ||||||  |||||||||||||| ||||    
T  40106046 gctattccaagtaacgtttgagcttatagtttat 40106013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 194 - 302
Target Start/End: Original strand, 45672356 - 45672464
Alignment:
Q  194 tttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttcca 293  Q
    |||||||||| ||||||  |||||| |||| ||||||| |||||||||||||| |||||||||||  |||||||||||||| |||||||||||| |||||    
T  45672356 tttacaacgaacttataatttattttacgaacttataagctatttttcagacgttatttcaagtagcgtttgagcttatagtttatcatcttttattcca 45672455  T
Q  294 tttttaccc 302  Q
    |||||||||    
T  45672456 tttttaccc 45672464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 176 - 279
Target Start/End: Original strand, 44596654 - 44596757
Alignment:
Q  176 tctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc 275  Q
    |||||||||||||  || ||||| | |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||||    
T  44596654 tctgtttggtaacacttttttaccatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagc 44596753  T
Q  276 ttat 279  Q
    ||||    
T  44596754 ttat 44596757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 483129 - 482990
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||| ||       ||| |||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  483129 agcttatagcttataagctcgtttcacaaaaaaagctttgtttggtaacactttttgaccatgagcttatagcttatttcacgagcttataagctatttt 483030  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  483029 tcagaagctattccaagtagcgtttgagcttatagcttat 482990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 35587587 - 35587726
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||        ||||||||| ||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  35587587 agcttatagcttataagctcgtttgacaaaaaaaactctgtttgataacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 35587686  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  35587687 tcagaagctattccaagtagcgtttgagcttatagcttat 35587726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 40637307 - 40637168
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||        |||||||||| |||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  40637307 agcttatagcttataagctcgtttgacaaaaaaaactctgtttggcaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 40637208  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  40637207 tcagaagctattccaagtagcgtttgagcttatagcttat 40637168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 47471109 - 47470970
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       | ||||||||||||   || || || | ||||||||||||||||||||||||||||||||||||||    
T  47471109 agcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaatactttttcaccatgagcttatagcttatttcacgagcttataaactatttt 47471010  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| | |||| ||||||  |||||||||||||||||||    
T  47471009 tcagaagttattccaagtagcgtttgagcttatagcttat 47470970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 12345180 - 12345075
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||   ||||||||||||    
T  12345180 gctctgtttggtaacactttttcacgaagagcttatagcttatttcacgagcttataagctatttttcagaagctatttcaagtagcatttgagcttata 12345081  T
Q  274 gcttat 279  Q
    ||||||    
T  12345080 gcttat 12345075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 33026918 - 33027023
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||    
T  33026918 gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttata 33027017  T
Q  274 gcttat 279  Q
    ||||||    
T  33027018 gcttat 33027023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 33203781 - 33203676
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||  |||||||||||||    
T  33203781 gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttata 33203682  T
Q  274 gcttat 279  Q
     |||||    
T  33203681 acttat 33203676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 178 - 311
Target Start/End: Original strand, 36436199 - 36436332
Alignment:
Q  178 tgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagctt 277  Q
    |||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||||||| |||||| ||| ||  ||||||||||||| |||    
T  36436199 tgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaaatagcgtttgagcttataactt 36436298  T
Q  278 atcatcttttcttccatttttacccttatcattt 311  Q
     |||  |||||||||| |||||||||||| ||||    
T  36436299 ctcactttttcttccaattttacccttattattt 36436332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 118 - 279
Target Start/End: Original strand, 40893357 - 40893519
Alignment:
Q  118 tgtttggtaagctcactaaatgagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggt-tgtttacaacgagcttatagcttat 216  Q
    |||||||||| | |||||||| || |||||||||||||| | |||||||       | |||||||||||| | | | ||||| |||||||||||||||||    
T  40893357 tgtttggtaaacccactaaattagtttatagcttataagttcgtttgacaaaaaaagttctgtttggtaatgatctctttaccacgagcttatagcttat 40893456  T
Q  217 ttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| ||||||||| |||||||| |||  ||||||||||||  |||||||||||||||||||    
T  40893457 ttcacaagcttataagctattttttagaacctatttcaagtagcgtttgagcttatagcttat 40893519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 140 - 305
Target Start/End: Complemental strand, 11466186 - 11466021
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||| ||||||||||||| ||||||        ||||||||||||||   || || || | |||||||||||||||||||||| ||||||| |||||||    
T  11466186 agcttttagcttataagctcgtttgataaaaaaagctctgtttggtaatactttttaaccatgagcttatagcttatttcacgaacttataagctatttt 11466087  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttaccctta 305  Q
    | ||| |||||| ||||||  |||||||||||||||||||  | |||||||||| |||||||||||    
T  11466086 ttagaagctattccaagtagcgtttgagcttatagcttattgttttttcttccacttttaccctta 11466021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 113 - 313
Target Start/End: Complemental strand, 27869736 - 27869536
Alignment:
Q  113 gggtctgtttggtaagctcactaaatgagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagc 212  Q
    |||||| |||||||||  |||  || |||||||||||||||||||| |||||||       |  |||||| |||| |||  || || ||  ||||||| |    
T  27869736 gggtctatttggtaagaccacataacgagcttatagcttataagctcgtttgacaaaaaaagtcctgtttagtaatggtctttcaccacccgcttataac 27869637  T
Q  213 ttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcatttt 312  Q
    ||||||||||||||||||| ||||||||| |||| |||| ||||||  ||||||| |||||||||||  | |||||||||||| |||||||||| |||||    
T  27869636 ttatttcacgagcttataagctatttttcggacgttattccaagtagcgtttgagtttatagcttattgttttttcttccattattacccttattatttt 27869537  T
Q  313 a 313  Q
    |    
T  27869536 a 27869536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 27655820 - 27655681
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||| ||||||||||||| ||||||        ||||||||||||||   || ||||| | ||||||||||||||||||| |||||||||| |||||||    
T  27655820 agcttttagcttataagctcgtttgataaaaaaagctctgtttggtaatacttttttaccatgagcttatagcttatttcaagagcttataagctatttt 27655721  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  27655720 tcagaagctattccaagtagcgtttgagcttatagcttat 27655681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 34709241 - 34709380
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||| ||||||||||| |||||||||       ||||||| |||||||  || || || | |||||||||| ||||||||||||||||||| |||||||    
T  34709241 agcttttagcttataagtttgtttgactaaaaaagctctgtctggtaacactttttcaccatgagcttatagtttatttcacgagcttataagctatttt 34709340  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  34709341 tcagaagctattccaagtagcgtttgagcttatagcttat 34709380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 44743725 - 44743864
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||| ||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  44743725 agcttatagtttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 44743824  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||   |||||| |||||||||||    
T  44743825 tcagaagctattccaagtagcatttgagtttatagcttat 44743864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 48832200 - 48832061
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||| ||||||||||||| |||||||       |||||||||||||||  || || ||   |||||||||||||||||||||||||||||| |||||||    
T  48832200 agcttttagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccgtgagcttatagcttatttcacgagcttataagctatttt 48832101  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||| | |||||| ||||||  |||||||||||||||||||    
T  48832100 tcaaaagctattccaagtagcgtttgagcttatagcttat 48832061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 791446 - 791341
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    |||||||||| ||||| || |||||||||| |||||||||||||| | |||||||||| |||||||||||| |||||| ||||||  |||||| ||||||    
T  791446 gctctgtttgataacgattttttacaacgaacttatagcttattttatgagcttataagctatttttcagatgctattacaagtagcgtttgaacttata 791347  T
Q  274 gcttat 279  Q
    ||||||    
T  791346 gcttat 791341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 9485786 - 9485863
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||  ||||||||||||||||||    
T  9485786 gagcttatagcttatttcacgagcttataagctatttttcaaaagctatttcaagtatcatttgagcttatagcttat 9485863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 178 - 279
Target Start/End: Complemental strand, 19757625 - 19757524
Alignment:
Q  178 tgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagctt 277  Q
    |||||| ||||| || |||||||||||||||||||||| |||| |||||||||| |||||||||| | |||| ||||||||  |||||||||||||||||    
T  19757625 tgtttgataacgcttttttacaacgagcttatagcttaattcaggagcttataagctatttttcaaaagctacttcaagtagcgtttgagcttatagctt 19757526  T
Q  278 at 279  Q
    ||    
T  19757525 at 19757524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 23029860 - 23029937
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||  |||||||||||||||||||    
T  23029860 gagcttatagcttatttcacgagcttataaactattattcagaagctattccaagtagcgtttgagcttatagcttat 23029937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 178 - 279
Target Start/End: Complemental strand, 36612220 - 36612119
Alignment:
Q  178 tgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagctt 277  Q
    |||||||||||| || |||||||||||||| |||||||||||| ||| |||||| |||||||| ||| |||| ||||||||  |||||||||||||||||    
T  36612220 tgtttggtaacgcttttttacaacgagcttttagcttatttcaggagtttataagctattttttagaagctacttcaagtagcgtttgagcttatagctt 36612121  T
Q  278 at 279  Q
    ||    
T  36612120 at 36612119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 43134446 - 43134551
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||    
T  43134446 gctctgtttggtaacactttttgaccatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttata 43134545  T
Q  274 gcttat 279  Q
     |||||    
T  43134546 acttat 43134551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 176 - 279
Target Start/End: Original strand, 36407272 - 36407375
Alignment:
Q  176 tctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc 275  Q
    |||||||||||||  || || || | ||||||||| |||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||||    
T  36407272 tctgtttggtaacactttttgaccatgagcttataacttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagc 36407371  T
Q  276 ttat 279  Q
    ||||    
T  36407372 ttat 36407375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 45222220 - 45222081
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||| ||||||||| |||||||       | |||||||||||||   | || || | |||||||||||||||||||||||||||||| |||||||    
T  45222220 agcttatagtttataagctcgtttgacaaaaaaagttctgtttggtaacaccttttcaccatgagcttatagcttatttcacgagcttataagctatttt 45222121  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||| ||||||||    
T  45222120 tcagaagctattccaagtagcgtttgagcttttagcttat 45222081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 17844614 - 17844691
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||  |||||  |||||||||||||||||||    
T  17844614 gagcttatagcttatttcacgagcttataagctatttttcagaagctattctaagtagcgtttgagcttatagcttat 17844691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 21742042 - 21742119
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||||||||||||||||||||| || |||||||||||| |||||| ||||||  |||||||||||||||||||    
T  21742042 gagcttatagcttatttcacgagcttaaaagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 21742119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 28425758 - 28425619
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    |||||||||||||||| || |||||||       | | |||||||||||  || || || | ||||||||||||||||||||||||||||||  ||||||    
T  28425758 agcttatagcttataaactcgtttgacaaaaaatgttttgtttggtaactttttttcaccatgagcttatagcttatttcacgagcttataagttatttt 28425659  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||| | |||||| ||||||  |||||||||||||||||||    
T  28425658 tcataagctattccaagtagtgtttgagcttatagcttat 28425619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 266 - 339
Target Start/End: Complemental strand, 33609143 - 33609070
Alignment:
Q  266 agcttatagcttatcatcttttcttccatttttacccttatcattttaattaaaactcacttttaccctttata 339  Q
    |||||||||||||||||||||| | |||||||||||||||| |||||||||||||| ||  |||||||||||||    
T  33609143 agcttatagcttatcatcttttgtcccatttttacccttattattttaattaaaacccatgtttaccctttata 33609070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 48313509 - 48313432
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||| ||||||||| |||||||||||| |||||| ||||||   ||||||||||||||||||    
T  48313509 gagcttatagcttatttcacaagcttataagctatttttcagaagctattccaagtagcttttgagcttatagcttat 48313432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 48590756 - 48590861
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    |||||||||||||||  || || || | ||||||||||||||||||||||||||||||  ||||||||| | ||||||  |||||  |||||||||||||    
T  48590756 gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagttatttttcaaaagctattcaaagtagcgtttgagcttata 48590855  T
Q  274 gcttat 279  Q
    ||||||    
T  48590856 gcttat 48590861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 225 - 339
Target Start/End: Original strand, 47584185 - 47584299
Alignment:
Q  225 cttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaattaaaactca 324  Q
    |||||||||||||||||||| | |||| ||| ||  ||||||| ||||||||| |||| |||| | |||||||||||||||| ||||||||| |||  ||    
T  47584185 cttataaactatttttcagaagttattccaaatagcgtttgagtttatagcttctcatattttatcccatttttacccttattattttaattcaaatcca 47584284  T
Q  325 cttttaccctttata 339  Q
      |||||||||||||    
T  47584285 tgtttaccctttata 47584299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 49148340 - 49148479
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    |||| ||||||||||||||| ||||||       ||||||||| |||||  || |  || | |||||||||||||||||||||||||||| | |||||||    
T  49148340 agctaatagcttataagcttttttgacaaaaaaagctctgtttagtaacacttttccaccatgagcttatagcttatttcacgagcttatgagctatttt 49148439  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| |||| |  |||||||||||||| ||||    
T  49148440 tcagaagctattccaagcagcgtttgagcttatagtttat 49148479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 141 - 258
Target Start/End: Complemental strand, 21316730 - 21316613
Alignment:
Q  141 gcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactattttt 240  Q
    |||||||||||||||||| |||||||        ||||||||||||||  || || || | |||||||||||||||||||  ||||||||| ||||||||    
T  21316730 gcttatagcttataagctcgtttgaccaaaaaaactctgtttggtaacactttttcactatgagcttatagcttatttcataagcttataagctattttt 21316631  T
Q  241 cagacgctatttcaagta 258  Q
    |||| |||||| ||||||    
T  21316630 cagaagctattccaagta 21316613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 32168841 - 32168938
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatt 237  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||    
T  32168841 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatt 32168938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 206 - 273
Target Start/End: Original strand, 48620531 - 48620598
Alignment:
Q  206 ttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    |||||| ||||||||||||||||||||||||||||||||  ||||||||||||  |||||||| ||||    
T  48620531 ttatagtttatttcacgagcttataaactatttttcagaaactatttcaagtagcgtttgagcatata 48620598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 244
Target Start/End: Complemental strand, 21740258 - 21740188
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcaga 244  Q
    |||||||||||||||| || |||||||| ||||||||||||||||||  || |||||| ||||||||||||    
T  21740258 gctctgtttggtaacgcttttttacaacaagcttatagcttatttcagaagtttataagctatttttcaga 21740188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 140 - 319
Target Start/End: Original strand, 38481288 - 38481467
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||| | |||||||       |||||||||||||||  || || || | ||  |||||||||||||||||||  ||||| |||||||    
T  38481288 agcttatagcttataagttcgtttgacaaaaacagctctgtttggtaacactttttcaccatgaatttatagcttatttcacgagtctataagctatttt 38481387  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaattaaa 319  Q
    ||| | |||||| ||||||  ||||||||||||| ||| |||  |||  ||||| ||||| |||||| ||| ||| ||||    
T  38481388 tcaaaagctattccaagtagcgtttgagcttataacttctcacttttaattccagttttatccttattattctaactaaa 38481467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 175 - 279
Target Start/End: Complemental strand, 38531294 - 38531191
Alignment:
Q  175 ctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatag 274  Q
    ||||||||||||||  || || || | || || ||||||||||| |||||||||||| |||||||||||| | || ||||||||  ||||||||||||||    
T  38531294 ctctgtttggtaacactttttcaccatgatctaatagcttattttacgagcttataagctatttttcagaagtta-ttcaagtagcgtttgagcttatag 38531196  T
Q  275 cttat 279  Q
    |||||    
T  38531195 cttat 38531191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 194 - 279
Target Start/End: Complemental strand, 22621551 - 22621466
Alignment:
Q  194 tttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||||| |||||| |||||||| ||||| ||||  ||||||||||||  ||||||||| |  ||||||||||||| |||||    
T  22621551 tttacaacgagattatagtttatttcaggagctcataacttatttttcagacattatttcaagcagcgtttgagcttataacttat 22621466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 24170818 - 24170860
Alignment:
Q  206 ttatagcttatttcacgagcttataaactatttttcagacgct 248  Q
    ||||||||||||||| |||||||||| ||||||||||||||||    
T  24170818 ttatagcttatttcatgagcttataagctatttttcagacgct 24170860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 305
Target Start/End: Original strand, 48729549 - 48729635
Alignment:
Q  219 cacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttaccctta 305  Q
    ||||||||||||   ||||||  |||||||||||||||||   |||||||||||| |||||  | |||||||||| |||||||||||    
T  48729549 cacgagcttatatcttattttctagacgctatttcaagtagcatttgagcttataacttattgttttttcttccacttttaccctta 48729635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 240
Target Start/End: Original strand, 21358657 - 21358692
Alignment:
Q  205 cttatagcttatttcacgagcttataaactattttt 240  Q
    |||||||||||||||||||| |||||||||||||||    
T  21358657 cttatagcttatttcacgagtttataaactattttt 21358692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 253 - 311
Target Start/End: Original strand, 32168940 - 32168998
Alignment:
Q  253 caagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||||  ||||||||||||||||| |||  |||||||||| |||||||||||| ||||    
T  32168940 caagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 32168998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 202 - 276
Target Start/End: Original strand, 39229953 - 39230027
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagct 276  Q
    ||||||||| | |||||||||| |||||||  |||||||||||  |||||| || ||  ||||||||||||||||    
T  39229953 gagcttataacctatttcacgaacttataacttatttttcagatactattttaaatagtgtttgagcttatagct 39230027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 304
Target Start/End: Original strand, 40893513 - 40893551
Alignment:
Q  266 agcttatagcttatcatcttttcttccatttttaccctt 304  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  40893513 agcttatagcttatcattttttcttccatctttaccctt 40893551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 269 - 335
Target Start/End: Original strand, 44072787 - 44072853
Alignment:
Q  269 ttatagcttatcatcttttcttccatttttacccttatcattttaattaaaactcacttttaccctt 335  Q
    |||||| ||||||| |||| || ||||||||| ||||| |||||||| ||||  |||||||||||||    
T  44072787 ttatagtttatcattttttattacatttttactcttattattttaatgaaaatccacttttaccctt 44072853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 261 - 313
Target Start/End: Complemental strand, 7884709 - 7884658
Alignment:
Q  261 gtttgagcttatagcttatcatcttttcttccatttttacccttatcatttta 313  Q
    |||||||||||||||||||  | |||||||||| |||||||||||| ||||||    
T  7884709 gtttgagcttatagcttatttt-ttttcttccacttttacccttattatttta 7884658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 21358734 - 21358774
Alignment:
Q  295 ttttacccttatcattttaattaaaactcacttttaccctt 335  Q
    |||||||||||| |||||||||||||  |||||||||||||    
T  21358734 ttttacccttattattttaattaaaatccacttttaccctt 21358774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 223 - 319
Target Start/End: Original strand, 39698930 - 39699026
Alignment:
Q  223 agcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaattaaa 319  Q
    |||||| || |||||||||||| |||||| ||||||   |||||||||||||||| |||  |||  || || |||||||||||| ||| ||| ||||    
T  39698930 agcttacaagctatttttcagaagctattccaagtagcatttgagcttatagcttctcacttttaatttcaattttacccttattattctaactaaa 39699026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 113 - 304
Target Start/End: Original strand, 9203 - 9401
Alignment:
Q  113 gggtctgtttggtaagctcactaaatgagcttatagcttata-------agcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagc 205  Q
    |||||| |||||||||| ||||||||||||||||||||||||       |||| |||||||        ||||||||| ||| |||   |||| ||||||    
T  9203 gggtctttttggtaagcccactaaatgagcttatagcttataccttataagctcgtttgacaaaaaaaactctgtttgttaatggtctcttaccacgagc 9302  T
Q  206 ttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttaccctt 304  Q
    | ||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||| ||||||||||| |||||||||    
T  9303 tcatagcttatttcacgagcttataaactatttttcagaagctatttcaagtagtgtttgagcttatagcttatcattttttcttccatctttaccctt 9401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 2e-38; HSPs: 80)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 196 - 301
Target Start/End: Original strand, 16669113 - 16669218
Alignment:
Q  196 tacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatt 295  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||  ||||||||||||||||||||||||||| |||||||    
T  16669113 tacaacgagcttatagcttatttcaggagcttataagctatttttcagacgctattccaagtagcgtttgagcttatagcttatcatcttttattccatt 16669212  T
Q  296 tttacc 301  Q
    ||||||    
T  16669213 tttacc 16669218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 200 - 358
Target Start/End: Original strand, 15250170 - 15250335
Alignment:
Q  200 acgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat-------catcttttcttcc 292  Q
    |||||||||||||||||||| |||||||||||  |||||||||||||||||| ||||||  |||||||||||||| ||||       ||| |||| ||||    
T  15250170 acgagcttatagcttatttctcgagcttataagttatttttcagacgctattccaagtagcgtttgagcttatagtttatagcttgtcatgttttgttcc 15250269  T
Q  293 atttttacccttatcattttaattaaaactcacttttaccctttatatattaaaacacatttatta 358  Q
    |||| |||||||||||||||||||||||| ||| ||||||| ||||||||| ||||||| ||||||    
T  15250270 atttctacccttatcattttaattaaaacccacatttaccccttatatatttaaacacacttatta 15250335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 200 - 339
Target Start/End: Original strand, 24019951 - 24020090
Alignment:
Q  200 acgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccattttta 299  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  ||||||||||||||||||||||||||| |||||||| ||    
T  24019951 acgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttatcatcttttattccatttata 24020050  T
Q  300 cccttatcattttaattaaaactcacttttaccctttata 339  Q
    || |||| ||||||  |||||  || |||||||| |||||    
T  24020051 ccattattattttatctaaaaaccaattttacccattata 24020090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 140 - 359
Target Start/End: Original strand, 34884815 - 34885035
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    |||| |||| |||||||||||||||||        ||||||||| ||| |||| |  || ||||| |||||| ||||||||||||||||||  |||||||    
T  34884815 agctgatagattataagcttgtttgacaaaaaaaactctgtttgataaaggttttccaccacgagtttatagtttatttcacgagcttatagcctatttt 34884914  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttcca-tttttacccttatcattttaattaaaactcacttttaccctttat 338  Q
    |||||| ||||| ||||||  |||| |||||||||||| |||| |||||||||| ||||||||||||| ||||||||||||||  |  |||| ||||||     
T  34884915 tcagactctattccaagtagtgtttcagcttatagcttctcattttttcttccattttttacccttataattttaattaaaacctaactttaacctttaa 34885014  T
Q  339 atattaaaacacatttattac 359  Q
    |||||||||||| ||||||||    
T  34885015 atattaaaacacctttattac 34885035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 140 - 319
Target Start/End: Complemental strand, 4385661 - 4385482
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       | |||||||||||||  || || || | ||| |||||||||||||||||||||||||| |||||||    
T  4385661 agcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgagtttatagcttatttcacgagcttataagctatttt 4385562  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaattaaa 319  Q
    |||||  ||||||||||||  ||||||||||||||||| |||  |||||||||| |||||||||||| |||| |||||||    
T  4385561 tcagaaactatttcaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattatttcaattaaa 4385482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 140 - 311
Target Start/End: Original strand, 5039780 - 5039951
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || ||   |||||||||||||||||||||||||||||| |||||||    
T  5039780 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccgtgagcttatagcttatttcacgagcttataagctatttt 5039879  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||| |||||| ||||||  ||||||||||||||||| |||  |||||||||| |||||||||||| ||||    
T  5039880 tcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 5039951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 178 - 319
Target Start/End: Original strand, 2758874 - 2759015
Alignment:
Q  178 tgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagctt 277  Q
    |||||||| || ||| ||||||||||||||||| ||||||||| |||||||||| |||||||| |||||||||| ||||||  |||||||||||||  ||    
T  2758874 tgtttggtgacagttttttacaacgagcttataacttatttcatgagcttataagctattttttagacgctattccaagtagcgtttgagcttataattt 2758973  T
Q  278 atcatcttttcttccatttttacccttatcattttaattaaa 319  Q
    |||||||||| |||||||||||||||||| | ||||| ||||    
T  2758974 atcatcttttattccatttttacccttattagtttaactaaa 2759015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 200 - 350
Target Start/End: Original strand, 4055955 - 4056112
Alignment:
Q  200 acgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttga-------gcttatagcttatcatcttttcttcc 292  Q
    |||||||||||||||||||||||||||||| | ||||||||||||| ||||| ||| ||  ||||||       |||||||||||||||| |||| || |    
T  4055955 acgagcttatagcttatttcacgagcttattagctatttttcagacactattccaaatagcgtttgaacttatagcttatagcttatcatgttttatttc 4056054  T
Q  293 atttttacccttatcattttaattaaaactcacttttaccctttatatattaaaacac 350  Q
    ||||||||| ||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  4056055 atttttacctttatcattttaattaaaacccacatttgccctttatatattaaaacac 4056112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 140 - 311
Target Start/End: Complemental strand, 31616522 - 31616351
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       ||| |||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  31616522 agcttatagcttataagctcgtttgacaaaaaaagctttgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 31616423  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||| |||||| ||| ||  ||||||||||||||||| |||  |||||||||| |||||||||||| ||||    
T  31616422 tcagaagctattccaaatagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 31616351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 140 - 314
Target Start/End: Complemental strand, 6760740 - 6760566
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||| ||       |||||||||||||||  || || || | |||||||||||||||||||| ||||||||| |||||||    
T  6760740 agcttatagcttataagctcgtttcacaaaaaaagctctgtttggtaacactttttgaccatgagcttatagcttatttcacaagcttataagctatttt 6760641  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaa 314  Q
    ||||| |||||| ||||||  ||||||||||||||||| |||| |||| |  ||||||||||||||||| |||||    
T  6760640 tcagaagctattccaagtagcgtttgagcttatagcttctcattttttgtctcatttttacccttatcaatttaa 6760566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 139 - 279
Target Start/End: Original strand, 39167755 - 39167895
Alignment:
Q  139 gagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactattt 238  Q
    |||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| ||||||    
T  39167755 gagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctattt 39167854  T
Q  239 ttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||| |||||| ||||||  |||||||||||||||||||    
T  39167855 ttcagaagctattccaagtagcgtttgagcttatagcttat 39167895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 650916 - 650777
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  650916 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 650817  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  650816 tcagaagctattccaagtagcgtttgagcttatagcttat 650777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 3377397 - 3377536
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  3377397 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 3377496  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  3377497 tcagaagctattccaagtagcgtttgagcttatagcttat 3377536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 4453659 - 4453520
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  4453659 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 4453560  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  4453559 tcagaagctattccaagtagtgtttgagcttatagcttat 4453520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 9886997 - 9887136
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  9886997 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 9887096  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||| | |||||||||||||  |||||||||||||||||||    
T  9887097 tcataagctatttcaagtagcgtttgagcttatagcttat 9887136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 16486887 - 16487026
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  16486887 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 16486986  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  16486987 tcagaagctattccaagtagcgtttgagcttatagcttat 16487026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 28382816 - 28382677
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  28382816 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 28382717  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  28382716 tcagaagctattccaagtagcgtttgagcttatagcttat 28382677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 36712672 - 36712533
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  36712672 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 36712573  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  36712572 tcagaagctattccaagtagcgtttgagcttatagcttat 36712533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 38579144 - 38579005
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  38579144 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 38579045  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  38579044 tcagaagctattccaagtagcgtttgagcttatagcttat 38579005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 43507698 - 43507559
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  43507698 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacattttttcaccatgagcttatagcttatttcacgagcttataagctatttt 43507599  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  43507598 tcagaagctattccaagtagcgtttgagcttatagcttat 43507559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 8815220 - 8815357
Alignment:
Q  142 cttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttc 241  Q
    ||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||||    
T  8815220 cttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttttc 8815319  T
Q  242 agacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||| |||||| ||||||  |||||||||||||||||||    
T  8815320 agaagctattccaagtagcgtttgagcttatagcttat 8815357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 113 - 338
Target Start/End: Complemental strand, 23357155 - 23356915
Alignment:
Q  113 gggtctgtttggtaagctcactaaatgagcttatagcttataagctt--------gtttgacnnnnnnngctctgtttggtaacggttgtttacaacgag 204  Q
    ||||||||||||||||| || ||||||||||||||||||||| ||||        |||||||       ||| |||||||||| | |   |||| |||||    
T  23357155 gggtctgtttggtaagcccattaaatgagcttatagcttataggcttataagctcgtttgacaaaaaaagctatgtttggtaatgctctcttaccacgag 23357056  T
Q  205 cttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata-------gcttatcatcttttcttccatttt 297  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||||||||  || ||||||||||       |||| | ||||||| |||||||||    
T  23357055 cttatagcttatttcacgagcttatatgctatttttcagaagctatttcaagtagcgtctgagcttatagcttttagctttttatcttttgttccatttt 23356956  T
Q  298 tacccttatcattttaattaaaactcacttttaccctttat 338  Q
    ||||||||| ||||||| ||||| |||  ||||||||||||    
T  23356955 tacccttattattttaactaaaagtcaaatttaccctttat 23356915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 41322763 - 41322900
Alignment:
Q  142 cttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttc 241  Q
    ||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||||    
T  41322763 cttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttttc 41322862  T
Q  242 agacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||| |||||| ||||||  |||||||||||||||||||    
T  41322863 agaagctattccaagtagcgtttgagcttatagcttat 41322900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 202 - 314
Target Start/End: Complemental strand, 41796816 - 41796704
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacc 301  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  ||||||||||||||||| |||| |||| |  ||||||||||    
T  41796816 gagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcattttttgtctcatttttacc 41796717  T
Q  302 cttatcattttaa 314  Q
    ||||||| |||||    
T  41796716 cttatcaatttaa 41796704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 176 - 311
Target Start/End: Complemental strand, 4038440 - 4038305
Alignment:
Q  176 tctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc 275  Q
    |||||||||||||  || || || | ||||||||||||||||||||||||||||||  ||||||||||| |||||| ||||||  |||||||||||||||    
T  4038440 tctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagttatttttcagaagctattccaagtagcgtttgagcttatagc 4038341  T
Q  276 ttatcatcttttcttccatttttacccttatcattt 311  Q
    || |||  |||||||||| |||||||||||| ||||    
T  4038340 ttctcactttttcttccaattttacccttattattt 4038305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 143 - 279
Target Start/End: Complemental strand, 8689095 - 8688959
Alignment:
Q  143 ttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttca 242  Q
    |||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| ||||||||||    
T  8689095 ttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttttca 8688996  T
Q  243 gacgctatttcaagtatagtttgagcttatagcttat 279  Q
    || |||||| ||||||  |||||||||||||||||||    
T  8688995 gaagctattccaagtagcgtttgagcttatagcttat 8688959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 2546460 - 2546321
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||   | || || | |||||||||||||||||||||||||||||| |||||||    
T  2546460 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacaaattttaaccatgagcttatagcttatttcacgagcttataagctatttt 2546361  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  2546360 tcagaagctattccaagtagcgtttgagcttatagcttat 2546321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 15521484 - 15521623
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       ||||||||||||||   || || || | |||||||||||||||||||||||||||||| |||||||    
T  15521484 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaaaactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 15521583  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  15521584 tcagaagctattccaagtagcgtttgagcttatagcttat 15521623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 24402188 - 24402049
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||| ||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  24402188 agcttttagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 24402089  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  24402088 tcagaagctattccaagtagcgtttgagcttatagcttat 24402049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 206 - 339
Target Start/End: Original strand, 38842906 - 38843046
Alignment:
Q  206 ttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagctta-------tcatcttttcttccattttt 298  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||| |||||||||||       |||| |||| | ||||||||    
T  38842906 ttatagcttatttcacgagcttataaactatttttcagaagctatttcaagtagcgtttgaacttatagcttataacttctcatattttatcccattttt 38843005  T
Q  299 acccttatcattttaattaaaactcacttttaccctttata 339  Q
    |||| ||| ||||||||||||| |||  |||||||||||||    
T  38843006 acccatattattttaattaaaattcatgtttaccctttata 38843046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 176 - 314
Target Start/End: Complemental strand, 40869459 - 40869321
Alignment:
Q  176 tctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc 275  Q
    |||||||||||||  || || || | ||||||||||||||||||| |||||||||| |||||||||||| |||||| ||||||  |||||||||||||||    
T  40869459 tctgtttggtaacactttttcaccatgagcttatagcttatttcatgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagc 40869360  T
Q  276 ttatcatcttttcttccatttttacccttatcattttaa 314  Q
    || |||| |||| |  ||||||||||||||||| |||||    
T  40869359 ttctcattttttgtctcatttttacccttatcaatttaa 40869321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 134 - 279
Target Start/End: Complemental strand, 7400533 - 7400388
Alignment:
Q  134 taaatgagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaac 233  Q
    ||||| || |||||||||||||| | |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |    
T  7400533 taaattagtttatagcttataagttcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagc 7400434  T
Q  234 tatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||||| |||||| ||||||  |||||||||||||||||||    
T  7400433 tatttttcagaagctattccaagtagcgtttgagcttatagcttat 7400388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 13111879 - 13111739
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgttt-ggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactattt 238  Q
    ||||||||||||||||||| |||||||       ||||||||| ||||||  || || || | |||||||||||||||||||||||||||||| ||||||    
T  13111879 agcttatagcttataagctcgtttgacaaaaaaagctctgttttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctattt 13111780  T
Q  239 ttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||| |||||| ||||||  |||||||||||||||||||    
T  13111779 ttcagaagctattccaagtagcgtttgagcttatagcttat 13111739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 143 - 279
Target Start/End: Original strand, 36999497 - 36999633
Alignment:
Q  143 ttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttca 242  Q
    |||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| ||||||||||    
T  36999497 ttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttttca 36999596  T
Q  243 gacgctatttcaagtatagtttgagcttatagcttat 279  Q
    || |||||| ||||||  ||||||||||||| |||||    
T  36999597 gaagctattccaagtagcgtttgagcttataacttat 36999633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 37356173 - 37356313
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnn-gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactattt 238  Q
    ||||||||||||||||||| |||||||        |||||||||||||||  || || || | |||||||||||||||||||||||||||||| ||||||    
T  37356173 agcttatagcttataagctcgtttgaccaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctattt 37356272  T
Q  239 ttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||| |||||| ||||||  |||||||||||||||||||    
T  37356273 ttcagaagctattccaagtagcgtttgagcttatagcttat 37356313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 217 - 304
Target Start/End: Original strand, 41877821 - 41877908
Alignment:
Q  217 ttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttaccctt 304  Q
    |||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||| |||||||| || |||||||||    
T  41877821 ttcacgagcttataaactatttttcagaagctatttcaagtagtgtttgagcttatagcttatcattttttcttcaatctttaccctt 41877908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 2266288 - 2266149
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||| ||||||||| |||||||        ||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  2266288 agcttatagtttataagctcgtttgacaaaaaaaactctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 2266189  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  2266188 tcagaagctattccaagtagcgtttgagcttatagcttat 2266149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 234 - 328
Target Start/End: Original strand, 6807492 - 6807586
Alignment:
Q  234 tatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaattaaaactcacttt 328  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||| ||||||  |||||| ||||||    
T  6807492 tatttttcagacgctatttcaagtagcgtttgagcttatagcttatcattttttcttccaattttacccttattattttatctaaaacccacttt 6807586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 10393171 - 10393032
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | ||||||||||||||||||| |||||||||| |||||||    
T  10393171 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcatgagcttataagctatttt 10393072  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  ||||||| |||||||||||    
T  10393071 tcagaagctattccaagtagcgtttgagtttatagcttat 10393032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 17263889 - 17263750
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||| ||||||||||||| |||||||       |||||||||||||||   | || || | |||||||||||||||||||||||||||||| |||||||    
T  17263889 agcttttagcttataagctcgtttgacaaaaaaagctctgtttggtaacatgttttcaccatgagcttatagcttatttcacgagcttataagctatttt 17263790  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  17263789 tcagaagctattccaagtagcgtttgagcttatagcttat 17263750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 174 - 319
Target Start/End: Original strand, 29514872 - 29515024
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||    
T  29514872 gctctgtttggtaacactttttcaccaagagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttata 29514971  T
Q  274 gctta-------tcatcttttcttccatttttacccttatcattttaattaaa 319  Q
    |||||       |||  |||||||||| |||||||||||| |||||| |||||    
T  29514972 gcttatagcttctcactttttcttccaattttacccttattattttatttaaa 29515024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 175 - 335
Target Start/End: Complemental strand, 5520169 - 5520002
Alignment:
Q  175 ctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagctta--- 271  Q
    |||||||| |||||| || ||||||||||||||||||||||||| | ||| |||||| |||||||||||| |||||| ||| ||  |||||||||||       
T  5520169 ctctgtttagtaacgattttttacaacgagcttatagcttattttatgagtttataagctatttttcagatgctattacaaatagcgtttgagcttatag 5520070  T
Q  272 ----tagcttatcatcttttcttccatttttacccttatcattttaattaaaactcacttttaccctt 335  Q
        ||||||||||| |||| |||||||| |||||||| || ||||| |||||| ||| |||||||||    
T  5520069 catatagcttatcatattttattccatttatacccttaccactttaagtaaaacccacgtttaccctt 5520002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 202 - 311
Target Start/End: Original strand, 43135684 - 43135793
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacc 301  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  ||||||||||||||||| |||  |||||||  | |||||||    
T  43135684 gagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttctttgaattttacc 43135783  T
Q  302 cttatcattt 311  Q
    ||||| ||||    
T  43135784 cttattattt 43135793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 21865251 - 21865391
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnn-gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactattt 238  Q
    ||||||||||||||||||| |||||||        |||||||||||||||  || || || | |||||||||||||||||||||||||||||| ||||||    
T  21865251 agcttatagcttataagctcgtttgacaaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctattt 21865350  T
Q  239 ttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||| | |||| ||||||  |||||||||||||||||||    
T  21865351 ttcagaagttattccaagtagcgtttgagcttatagcttat 21865391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 40025078 - 40024939
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    |||||||||| |||||||| |||||||       | |||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  40025078 agcttatagcatataagctcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 40024979  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||   ||||||||||||||||||    
T  40024978 tcagaagctattccaagtagcctttgagcttatagcttat 40024939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 194 - 335
Target Start/End: Complemental strand, 7823629 - 7823481
Alignment:
Q  194 tttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat--catc-----ttt 286  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| | | |||| ||||||||  |||||||||||||||||||  ||||     |||    
T  7823629 tttacaacgagcttgtagcttatttcacgagcttataagctattttttataagctacttcaagtagcgtttgagcttatagcttatagcatctcactttt 7823530  T
Q  287 tcttccatttttacccttatcattttaattaaaactcacttttaccctt 335  Q
      ||| | |||||||||||| |||||||||||||  |||||||||||||    
T  7823529 aattctagttttacccttattattttaattaaaatccacttttaccctt 7823481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 201 - 313
Target Start/End: Original strand, 25071436 - 25071555
Alignment:
Q  201 cgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttg-------agcttatagcttatcatcttttcttcca 293  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||  ||||| ||||||  |||||       ||||||||||||||||||||||||||||    
T  25071436 cgagcttatagtttatttcacgagcttataagctatttttcagaaactattccaagtagcgtttgagcttatagcttatagcttatcatcttttcttcca 25071535  T
Q  294 tttttacccttatcatttta 313  Q
    ||| ||||||||| ||||||    
T  25071536 tttatacccttattatttta 25071555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 174 - 311
Target Start/End: Original strand, 43285657 - 43285794
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    |||||||||||||||  || || || | ||||||||||||||||||| ||| |||||| |||||||||||| |||||| ||| ||  |||||||||||||    
T  43285657 gctctgtttggtaacactttttcaccatgagcttatagcttatttcatgagtttataagctatttttcagaagctattccaaatagcgtttgagcttata 43285756  T
Q  274 gcttatcatcttttcttccatttttacccttatcattt 311  Q
    |||| |||  |||||||| | |||||||||||| ||||    
T  43285757 gcttctcactttttcttctacttttacccttattattt 43285794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 176 - 279
Target Start/End: Complemental strand, 6232380 - 6232277
Alignment:
Q  176 tctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc 275  Q
    |||||||||||||  || || || | |||||||||| ||||||||||||||||||| |||||||||||| | |||||||||||  |||||||||||||||    
T  6232380 tctgtttggtaacactttttcaccatgagcttatagtttatttcacgagcttataagctatttttcagaagatatttcaagtagcgtttgagcttatagc 6232281  T
Q  276 ttat 279  Q
    ||||    
T  6232280 ttat 6232277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 176 - 279
Target Start/End: Complemental strand, 38880882 - 38880779
Alignment:
Q  176 tctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc 275  Q
    |||||||||||||  || || || | ||||||||||||||||||||||| |||||| |||||||||||| |||||| ||||||  |||||||||||||||    
T  38880882 tctgtttggtaacactttttgaccatgagcttatagcttatttcacgagtttataagctatttttcagaagctattccaagtagcgtttgagcttatagc 38880783  T
Q  276 ttat 279  Q
    ||||    
T  38880782 ttat 38880779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 10839716 - 10839577
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    |||||||||||||||| || |||||||       |||||||||||||||  || || || | ||||||||| |||||||||| ||||||||| |||||||    
T  10839716 agcttatagcttataaactcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatatcttatttcactagcttataagctatttt 10839617  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||| | |||||| ||||||  |||||||||||||||||||    
T  10839616 tcaaaagctattccaagtagcgtttgagcttatagcttat 10839577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 207 - 304
Target Start/End: Complemental strand, 6222708 - 6222611
Alignment:
Q  207 tatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttaccctt 304  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||| |   ||||| ||||||||||||||| ||| ||| ||| |||||||||    
T  6222708 tatagcttatttcacgagcttataagctatttttcagaagctatttcaagcagcatttgaacttatagcttatcatttttgctttcatctttaccctt 6222611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 219 - 339
Target Start/End: Original strand, 13761842 - 13761960
Alignment:
Q  219 cacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaattaa 318  Q
    ||||||||||||| |||||||||||| | ||   ||||||  |||||||||||||||||||||||||||||||||||| ||||||||| ||||||  |||    
T  13761842 cacgagcttataagctatttttcagaagttac--caagtagcgtttgagcttatagcttatcatcttttcttccatttatacccttattattttatctaa 13761939  T
Q  319 aactcacttttaccctttata 339  Q
    ||  || |||||||| |||||    
T  13761940 aaaccaattttacccattata 13761960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 26911578 - 26911655
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  ||||||||||||| |||||    
T  26911578 gagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttataacttat 26911655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 202 - 319
Target Start/End: Original strand, 42132734 - 42132851
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacc 301  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||| ||| ||  ||||||||||||||||| |||  |||  || || |||||||    
T  42132734 gagcttatagcttatttcacgagcttataagctatttttcagaagctattccaaatagcgtttgagcttatagcttctcacttttaattacagttttacc 42132833  T
Q  302 cttatcattttaattaaa 319  Q
    ||||| ||| ||| ||||    
T  42132834 cttattattctaactaaa 42132851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 178 - 279
Target Start/End: Original strand, 44275705 - 44275806
Alignment:
Q  178 tgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagctt 277  Q
    |||||||||||  || || || |||||||||||||||||||||||||||||||| |||||||||||| | |||| ||| ||  |||||||||||||||||    
T  44275705 tgtttggtaacactttttgaccacgagcttatagcttatttcacgagcttataatctatttttcagaagttattccaattagcgtttgagcttatagctt 44275804  T
Q  278 at 279  Q
    ||    
T  44275805 at 44275806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 175 - 279
Target Start/End: Original strand, 598931 - 599035
Alignment:
Q  175 ctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatag 274  Q
    ||||| ||||||||| || ||||||||||| |||||| ||||||||  ||||||||| |||||||||||| |||| ||||||||  ||||||||||||||    
T  598931 ctctgcttggtaacgcttttttacaacgagtttatagtttatttcaaaagcttataagctatttttcagaagctacttcaagtagcgtttgagcttatag 599030  T
Q  275 cttat 279  Q
     ||||    
T  599031 tttat 599035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 9053198 - 9053128
Alignment:
Q  208 atagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagctta 278  Q
    |||| ||||||||||||||||||||||||| |||||| |||||||||||||  ||||||||||||||||||    
T  9053198 atagtttatttcacgagcttataaactattcttcagaagctatttcaagtagcgtttgagcttatagctta 9053128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 231 - 311
Target Start/End: Complemental strand, 13351649 - 13351569
Alignment:
Q  231 aactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||| | || ||||||| || |||||||||||| ||||    
T  13351649 aactatttttcagacgctatttcaagtagcgtttgagcttatagcttcttattttttctttcaattttacccttattattt 13351569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 202 - 273
Target Start/End: Complemental strand, 7213735 - 7213664
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  ||||| |||||||    
T  7213735 gagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgtgcttata 7213664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 200 - 311
Target Start/End: Original strand, 37674484 - 37674595
Alignment:
Q  200 acgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccattttta 299  Q
    ||||| |||||  ||||||||||||||| |||||||| ||| |||||||||| ||||||  ||||||| ||||||||| |||  |||||||||| |||||    
T  37674484 acgagtttataatttatttcacgagcttgtaaactatattttagacgctattccaagtagcgtttgagtttatagcttctcactttttcttccactttta 37674583  T
Q  300 cccttatcattt 311  Q
     |||||| ||||    
T  37674584 tccttattattt 37674595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 234 - 320
Target Start/End: Original strand, 3337166 - 3337252
Alignment:
Q  234 tatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaattaaaa 320  Q
    ||||||||||||| |||||||| ||   |||||||||||||||||||||||||| || |||||| |||||||||| ||||| |||||    
T  3337166 tatttttcagacgttatttcaaataatatttgagcttatagcttatcatcttttatttcattttcacccttatcactttaactaaaa 3337252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 178 - 279
Target Start/End: Complemental strand, 8070718 - 8070617
Alignment:
Q  178 tgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagctt 277  Q
    |||||||||||  || || || | ||||||||| |||||||||||||||||||| |||||||||||| ||||||  |||||  |||||||||||||| ||    
T  8070718 tgtttggtaacactttttcaccatgagcttataacttatttcacgagcttataagctatttttcagaagctattctaagtagcgtttgagcttatagttt 8070619  T
Q  278 at 279  Q
    ||    
T  8070618 at 8070617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 222 - 311
Target Start/End: Original strand, 18710257 - 18710346
Alignment:
Q  222 gagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    |||||||||| |||||||| ||| |||||| ||||||  ||||||||||||||||| |||  |||||||||| |||||||||||| ||||    
T  18710257 gagcttataagctattttttagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacccttattattt 18710346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 206 - 337
Target Start/End: Original strand, 2221460 - 2221598
Alignment:
Q  206 ttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttg-------agcttatagcttatcatcttttcttccattttt 298  Q
    |||||| ||||||||||||||| ||| ||||||||||||||||||| ||||||  |||||       | |||||| |||||||| |||||||||  ||||    
T  2221460 ttatagtttatttcacgagcttctaagctatttttcagacgctattccaagtaacgtttgaacttataacttataacttatcattttttcttcctatttt 2221559  T
Q  299 acccttatcattttaattaaaactcacttttacccttta 337  Q
    |||||||| ||||||  |||||  || ||||||||||||    
T  2221560 acccttattattttatctaaaatccatttttacccttta 2221598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 6153515 - 6153427
Alignment:
Q  223 agcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    ||||||||| |||||||||||| | |||| ||||||  ||||||||||||||||| |||| ||||||| || |||||||||||| ||||    
T  6153515 agcttataagctatttttcagaagttattccaagtagtgtttgagcttatagcttctcattttttctttcaattttacccttattattt 6153427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 13528038 - 13527901
Alignment:
Q  142 cttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttc 241  Q
    ||||||||||||||||| |||||||       |||||||| ||||||   | || || | ||| ||||| |||||||||| || |||||| |||||||||    
T  13528038 cttatagcttataagctcgtttgacaaaaaaagctctgttcggtaacaccttttcaccatgagtttataacttatttcacaagtttataagctatttttc 13527939  T
Q  242 agacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||| |||||||||||||  |||||| ||||||||||||    
T  13527938 agaagctatttcaagtaacgtttgaacttatagcttat 13527901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 142 - 238
Target Start/End: Original strand, 18212127 - 18212223
Alignment:
Q  142 cttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactattt 238  Q
    ||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| ||||||    
T  18212127 cttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctattt 18212223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 203 - 319
Target Start/End: Original strand, 10727898 - 10728021
Alignment:
Q  203 agcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgag-------cttatagcttatcatcttttcttccatt 295  Q
    ||||||||||||||||||||| ||||||| |||||||||| |  ||||| ||||||  |||||||       |||||||||| |||  |||||||||| |    
T  10727898 agcttatagcttatttcacgaacttataagctatttttcaaaaactattccaagtagcgtttgagcttataacttatagcttctcactttttcttccaat 10727997  T
Q  296 tttacccttatcattttaattaaa 319  Q
    ||||||||||| |||||| |||||    
T  10727998 tttacccttattattttatttaaa 10728021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 113 - 155
Target Start/End: Original strand, 24019846 - 24019888
Alignment:
Q  113 gggtctgtttggtaagctcactaaatgagcttatagcttataa 155  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  24019846 gggtctgtttggtaagcccactaaatgagcttatagcttataa 24019888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 279
Target Start/End: Complemental strand, 2047391 - 2047318
Alignment:
Q  206 ttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||||||||||| ||| |||||| |||||||||||| | ||||  |||||  |||||||||||||||||||    
T  2047391 ttatagcttatttcatgagtttataagctatttttcagaagttattctaagtagcgtttgagcttatagcttat 2047318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 154
Target Start/End: Original strand, 13761750 - 13761791
Alignment:
Q  113 gggtctgtttggtaagctcactaaatgagcttatagcttata 154  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  13761750 gggtctgtttggtaagcccactaaatgagcttatagcttata 13761791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 202 - 319
Target Start/End: Complemental strand, 33850198 - 33850081
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacc 301  Q
    ||||||||||| |||||||| || |||||   |||| | || |||||||||||||||  ||||||| |||||||||||  | |||||||||| ||||| |    
T  33850198 gagcttatagcgtatttcactagtttatagcttattctccatacgctatttcaagtagcgtttgagtttatagcttattgttttttcttccacttttaac 33850099  T
Q  302 cttatcattttaattaaa 319  Q
    ||||  ||||| ||||||    
T  33850098 cttactattttgattaaa 33850081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 268 - 339
Target Start/End: Original strand, 2757312 - 2757383
Alignment:
Q  268 cttatagcttatcatcttttcttccatttttacccttatcattttaattaaaactcacttttaccctttata 339  Q
    |||||| |||||||| ||||||| ||||||||||||||| ||||||  ||||| |||||| ||||| |||||    
T  2757312 cttataacttatcattttttctttcatttttacccttattattttatctaaaattcacttatacccattata 2757383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 8340046 - 8340123
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||| |||||| ||||  |||||| |||||||||| | |||||| ||||||  ||||||||||| |||||||    
T  8340046 gagcttatagtttattttacgaatttataagctatttttcaaaagctattccaagtagcgtttgagcttaaagcttat 8340123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 311
Target Start/End: Complemental strand, 12738620 - 12738544
Alignment:
Q  235 atttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttacccttatcattt 311  Q
    |||||||| ||||||||| |||||   |||||| ||||| |||| ||| |||| |||||||||||||||||| ||||    
T  12738620 atttttcatacgctattttaagtagcatttgagtttataacttaccattttttattccatttttacccttattattt 12738544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 7569853 - 7569908
Alignment:
Q  222 gagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagctt 277  Q
    |||||||||| |||||||||||| | ||||| |||||  |||||||||||||||||    
T  7569853 gagcttataagctatttttcagaagttattttaagtaacgtttgagcttatagctt 7569908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 287
Target Start/End: Complemental strand, 2689151 - 2689059
Alignment:
Q  194 tttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatctttt 287  Q
    ||||||| |||||||||||||||||||  ||| ||||   |||||| || | |||||||||||||  |||||| |||||| |||||||| ||||    
T  2689151 tttacaatgagcttatagcttatttcagaagc-tatagtttattttccaaaagctatttcaagtagcgtttgaacttataacttatcatttttt 2689059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 273
Target Start/End: Original strand, 26411311 - 26411384
Alignment:
Q  200 acgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    |||||||||||||||||||||| ||||||   | |||| | ||||| ||||||||| ||  |||||||||||||    
T  26411311 acgagcttatagcttatttcactagcttaaggattattctccagacactatttcaaatagcgtttgagcttata 26411384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 279
Target Start/End: Original strand, 39675078 - 39675163
Alignment:
Q  194 tttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||||| || |||||| ||||||||| ||| ||||||  ||||||||| | |||  ||||||||  ||||||||||||| |||||    
T  39675078 tttacaatgaacttataacttatttcaagagtttataagatatttttcaaaagctgcttcaagtagcgtttgagcttataacttat 39675163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 78; Significance: 4e-36; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 175 - 304
Target Start/End: Original strand, 84298 - 84427
Alignment:
Q  175 ctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatag 274  Q
    ||||||||||||| |||   |||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||     
T  84298 ctctgtttggtaatggtctcttatcacgagcttatagcttatttcacgagcttataaactatttttcagaagctatttcaagtagcgtttgagcttataa 84397  T
Q  275 cttatcatcttttcttccatttttaccctt 304  Q
    |||||||| ||||||||||| | |||||||    
T  84398 cttatcattttttcttccatctctaccctt 84427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 93463 - 93386
Alignment:
Q  202 gagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||||||||||||||||||||||| |||||||||| | |||||| ||||||  |||||||||||||||||||    
T  93463 gagcttatagcttatttcacgagcttataagctatttttcataagctattccaagtagcgtttgagcttatagcttat 93386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 174 - 311
Target Start/End: Complemental strand, 53126 - 52989
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttata 273  Q
    |||||||||||||||  || || || | ||||||||||| |||||||||||||||||| |||||||||||| |||||| ||||||  |||||||||||||    
T  53126 gctctgtttggtaacactttttcaccatgagcttatagcctatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttata 53027  T
Q  274 gcttatcatcttttcttccatttttacccttatcattt 311  Q
    |||| |||  |||||||||| |||||||||||| ||||    
T  53026 gcttctcactttttcttccaattttacccttattattt 52989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 178 - 279
Target Start/End: Complemental strand, 119340 - 119239
Alignment:
Q  178 tgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagctt 277  Q
    ||||| ||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||| |||||| ||||||||||||||||||    
T  119340 tgtttagtaacagttttttacaacgagcttatagcttatttcacgagcttataagctatttttcagatcctattccaagtagagtttgagcttatagctt 119241  T
Q  278 at 279  Q
    ||    
T  119240 at 119239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 139 - 279
Target Start/End: Original strand, 431264 - 431404
Alignment:
Q  139 gagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactattt 238  Q
    |||||| ||||||||||| | |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| ||||||    
T  431264 gagcttttagcttataagttcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctattt 431363  T
Q  239 ttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||| |||||| ||| ||  |||||||||||||||||||    
T  431364 ttcagaagctattccaaatagcgtttgagcttatagcttat 431404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1632 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold1632
Description:

Target: scaffold1632; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 176 - 37
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||| ||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  176 agcttatagcttataagctcgtttcacaaaaaaagctctgtttggtaacactttttgaccatgagcttatagcttatttcacgagcttataagctatttt 77  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  76 tcagaagctattccaagtagcgtttgagcttatagcttat 37  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 22602 - 22741
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | ||||||||||||||||||||||||||||||  ||||||    
T  22602 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagttatttt 22701  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  |||||||||||||||||||    
T  22702 tcagaagctattccaagtagcgtttgagcttatagcttat 22741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 126899 - 126760
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| |||||||       |||||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||    
T  126899 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 126800  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  | |||||||||||||||||    
T  126799 tcagaagctattccaagtagcgcttgagcttatagcttat 126760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 175 - 311
Target Start/End: Original strand, 5451 - 5586
Alignment:
Q  175 ctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatag 274  Q
    ||||||||||||||  || ||||| | ||||||||| ||||||||||||||||||||  ||||||||||| |||||| ||||||  ||||||||||||||    
T  5451 ctctgtttggtaacacttttttaccatgagcttata-cttatttcacgagcttataagttatttttcagaagctattccaagtagcgtttgagcttatag 5549  T
Q  275 cttatcatcttttcttccatttttacccttatcattt 311  Q
    ||| |||  |||||||||| |||||||||||| ||||    
T  5550 cttctcactttttcttccaattttacccttattattt 5586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 118 - 279
Target Start/End: Complemental strand, 72927 - 72765
Alignment:
Q  118 tgtttggtaagctcactaaatgagcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggt-tgtttacaacgagcttatagcttat 216  Q
    |||||||||| | |||||||| || |||||||||||||| | |||||||       | |||||||||||| | | | ||||| |||||||||||||||||    
T  72927 tgtttggtaaacccactaaattagtttatagcttataagttcgtttgacaaaaaaagttctgtttggtaatgatctctttaccacgagcttatagcttat 72828  T
Q  217 ttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| ||||||||| |||||||| |||  ||||||||||||  |||||||||||||||||||    
T  72827 ttcacaagcttataagctattttttagaacctatttcaagtagcgtttgagcttatagcttat 72765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 175 - 311
Target Start/End: Complemental strand, 30281 - 30145
Alignment:
Q  175 ctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatag 274  Q
    ||||||||||||||  || || || | ||||||||||||||||||||||| |||||| |||||||||||| | |||| ||||||  ||||||||||||||    
T  30281 ctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagtttataagctatttttcagaagttattccaagtagcgtttgagcttatag 30182  T
Q  275 cttatcatcttttcttccatttttacccttatcattt 311  Q
    ||| |||  ||||||| || |||||||||||| ||||    
T  30181 cttctcacattttctttcaattttacccttattattt 30145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 279
Target Start/End: Complemental strand, 28139 - 28076
Alignment:
Q  216 tttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||| ||||||||| |||||||||||| |||||| ||||||  |||||||||||||||||||    
T  28139 tttcacaagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 28076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 203 - 314
Target Start/End: Original strand, 4562 - 4673
Alignment:
Q  203 agcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccatttttaccc 302  Q
    |||||||| |||||||||||||||||||| |||||||||||| | |||| ||||||  ||||||||||||||||| |||| |||| |  |||||||||||    
T  4562 agcttataacttatttcacgagcttataagctatttttcagaagttattccaagtagcgtttgagcttatagcttctcattttttgtctcatttttaccc 4661  T
Q  303 ttatcattttaa 314  Q
    |||||| |||||    
T  4662 ttatcaatttaa 4673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 176 - 279
Target Start/End: Original strand, 7100 - 7203
Alignment:
Q  176 tctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc 275  Q
    |||||||||||||  || ||||| | |||||||||||||||||||||||||||||| |||||||| ||| |||||| ||||||  |||||||||||||||    
T  7100 tctgtttggtaacacttttttaccatgagcttatagcttatttcacgagcttataagctattttttagaagctattccaagtagtgtttgagcttatagc 7199  T
Q  276 ttat 279  Q
    ||||    
T  7200 ttat 7203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 140 - 279
Target Start/End: Complemental strand, 12856 - 12717
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| ||||||        |||||||||||||||  || || || | ||||||||||||||||| |||||||||||| |||||||    
T  12856 agcttatagcttataagctcgtttgataaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttgacgagcttataagctatttt 12757  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    ||||| |||||| ||||||  ||||||| |||||||||||    
T  12756 tcagaagctattccaagtagcgtttgaggttatagcttat 12717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 176 - 279
Target Start/End: Original strand, 63887 - 63990
Alignment:
Q  176 tctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagc 275  Q
    |||||||||||||  || || || | |||||||||||||||||||||||||||||| |||||||||||| ||||||  |||||  |||||||||||||||    
T  63887 tctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttttcagaagctattctaagtagcgtttgagcttatagc 63986  T
Q  276 ttat 279  Q
    ||||    
T  63987 ttat 63990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 140 - 279
Target Start/End: Original strand, 192020 - 192159
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnngctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttt 239  Q
    ||||||||||||||||||| || ||||       ||||||||||||||   || || || | |||||||||||||||||||||||||||||| |||||||    
T  192020 agcttatagcttataagctcgtatgacaaaaaaagctctgtttggtaatactttttcaccatgagcttatagcttatttcacgagcttataagctatttt 192119  T
Q  240 tcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    | ||| |||||| ||||||   ||||||||||||||||||    
T  192120 tgagaagctattccaagtagcttttgagcttatagcttat 192159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 10824 - 10901
Alignment:
Q  194 tttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagctta 271  Q
    |||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||| ||| ||  |||||||||||    
T  10824 tttacaacaagcttatagcttatttcacgagtttataagctatttttcagacgctattccaaatagcgtttgagctta 10901  T

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Target: scaffold0075 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 140 - 251
Target Start/End: Complemental strand, 27274 - 27162
Alignment:
Q  140 agcttatagcttataagcttgtttgacnnnnnnn-gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactattt 238  Q
    ||||||||||||||||||| |||||||        ||| |||||||||||  || || || | |||||||||||||||||||||||||||||| ||||||    
T  27274 agcttatagcttataagctcgtttgacaaaataaagctatgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctattt 27175  T
Q  239 ttcagacgctatt 251  Q
    |||||| ||||||    
T  27174 ttcagaagctatt 27162  T

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Target: scaffold0347 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 11850 - 11910
Alignment:
Q  261 gtttgagcttatagcttatcatcttttcttccatttttacccttatcattttaattaaaac 321  Q
    ||||||||||||| |||||||| |||| ||||||||||| |||||||||||| ||||||||    
T  11850 gtttgagcttataacttatcattttttattccatttttatccttatcatttttattaaaac 11910  T

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Target: scaffold1360 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1360
Description:

Target: scaffold1360; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 266 - 339
Target Start/End: Complemental strand, 1251 - 1178
Alignment:
Q  266 agcttatagcttatcatcttttcttccatttttacccttatcattttaattaaaactcacttttaccctttata 339  Q
    ||||||||||||||||| ||||||| ||||||||||||||| ||||||  |||||  || |||||||| |||||    
T  1251 agcttatagcttatcatattttctttcatttttacccttattattttatctaaaatccaattttacccattata 1178  T

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Target: scaffold0027 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 222 - 279
Target Start/End: Complemental strand, 41822 - 41765
Alignment:
Q  222 gagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttat 279  Q
    |||||||||| |||||||||||| |||||| ||||||  |||||||||||||||||||    
T  41822 gagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 41765  T

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Target: scaffold0598 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 9067 - 8984
Alignment:
Q  174 gctctgtttggtaacggttgtttacaacgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagta 258  Q
    |||||||||||||| || | || || |||||||||||| ||||||||| || |||||| ||||||||||||| || |||||||||    
T  9067 gctctgtttggtaatgggttttcaccacgagcttatagtttatttcacaagtttataagctatttttcagacact-tttcaagta 8984  T

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Target: scaffold0043 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 200 - 324
Target Start/End: Complemental strand, 59257 - 59134
Alignment:
Q  200 acgagcttatagcttatttcacgagcttataaactatttttcagacgctatttcaagtatagtttgagcttatagcttatcatcttttcttccattttta 299  Q
    ||||||||||| |||||||||| ||||||||   |||| ||||||| |||||| || ||   ||| ||||||||||||||||| |||| |  ||||||||    
T  59257 acgagcttataacttatttcactagcttatagtttattattcagacactattttaaatagcatttaagcttatagcttatcat-ttttatctcattttta 59159  T
Q  300 cccttatcattttaattaaaactca 324  Q
    ||||| | |||| || |||||||||    
T  59158 cccttgtaatttaaactaaaactca 59134  T

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Target: scaffold0050 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 306
Target Start/End: Original strand, 32580 - 32613
Alignment:
Q  273 agcttatcatcttttcttccatttttacccttat 306  Q
    ||||||||||||||| ||||||||||||||||||    
T  32580 agcttatcatcttttattccatttttacccttat 32613  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 50373 - 50426
Alignment:
Q  113 gggtctgtttggtaagctcactaaatgagcttatagcttataagcttgtttgac 166  Q
    ||||||||||||||||  |   |||||||||||||||||||||||| |||||||    
T  50373 gggtctgtttggtaagacctgaaaatgagcttatagcttataagctcgtttgac 50426  T

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