View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17555_high_1 (Length: 401)
Name: NF17555_high_1
Description: NF17555
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17555_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 142 - 375
Target Start/End: Original strand, 32012612 - 32012842
Alignment:
| Q |
142 |
ttatatttcttgttgttgtctacaatgggccgcggaacagcggcatgttgatgacgtaatcgaccattgaaacgacgtccaaccttggatgcattatttg |
241 |
Q |
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| T |
32012612 |
ttatatttcttgttgttgtctacaatgggccgtggaacagcggcatgttgatgacgtaatcgaccattgaaacgacatccaaccttggatgcattatttg |
32012711 |
T |
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| Q |
242 |
cgtccatagttgagatgccacaacccatgatgtatataaggactaggaattacgaaaagatcaaattaggagggtaaagagaattgaagaattgggttaa |
341 |
Q |
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| T |
32012712 |
agtccatagttgagatgccacaacccatgatgtatataaggactaggaattacgaaaagatcaaattaggagggtaaagagaattgaagaattgggttaa |
32012811 |
T |
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| Q |
342 |
caataataatagggattgtgaatgcgacatatta |
375 |
Q |
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| T |
32012812 |
c---aataatagggattgtgaatgcgacatatta |
32012842 |
T |
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