View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17555_high_6 (Length: 211)
Name: NF17555_high_6
Description: NF17555
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17555_high_6 |
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Alignment Details
Target: chr1 (Bit Score: 111; Significance: 3e-56; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 6736451 - 6736333
Alignment:
| Q |
14 |
gaagctgagaggttagaggctaggattagttttgcggtgtaacgggagattttgagaagtttgtcaacaccgtcgcgtttggcgaggtaggtttcgaagt |
113 |
Q |
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| T |
6736451 |
gaagctgagaggttagaggcgaggattagttttgcggtgtaacgggagattttgagaagtttgtcaacgccgtcgcgtttggcgaggtaggtttcgaagt |
6736352 |
T |
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| Q |
114 |
gggttaagaaatctcgttc |
132 |
Q |
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| T |
6736351 |
gggttaagaaatctcgttc |
6736333 |
T |
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