View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17556_low_13 (Length: 392)
Name: NF17556_low_13
Description: NF17556
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17556_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 347; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 4 - 375
Target Start/End: Complemental strand, 36529678 - 36529311
Alignment:
| Q |
4 |
atgaattttttatatggaccaaactaaaaagtgtaatttataaaaactataaacatacttaactctaattagatataacttaaattcatagagtattgtt |
103 |
Q |
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| T |
36529678 |
atgaattttttatatggaccaaactaaaaagtgtaatttataaaaactataaacatacttaactctaattagatataacttaaactcatagagtattgtt |
36529579 |
T |
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| Q |
104 |
tattctgaaaagagacatagcttgtggttaaatttctgattgaaatgaggcacataaatacttatcttgagaagcctgaacttttgttttcagatgtggc |
203 |
Q |
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| T |
36529578 |
tattctgaaaagagacatagcttgtggttaaatttctgattgaaatgaggcacataaatacttatcttgagaagcctgaacttttgttttcagatatggc |
36529479 |
T |
|
| Q |
204 |
ataaaggttcagaaaagtctgaggtccaaaacatggccaaggatgaagttcaggaatacaagagatatgcttagtggttggaaatttgggggctttcatt |
303 |
Q |
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| T |
36529478 |
ataaaggttcagaaaagtctgaggtccaaaacatggccaaggatgaagttcaggaatacaagagatatgcttagtggttggaaatttgggggctttcatt |
36529379 |
T |
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| Q |
304 |
tctgatattgttgcatggaatgaatgaatgatgatatgctatagcactaaagaaattgattgaaggacaagc |
375 |
Q |
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| T |
36529378 |
tctgatattgttgcatggaatga----atgatgatatgctatagcactaaagaaattgattgaaggacaagc |
36529311 |
T |
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