View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17556_low_35 (Length: 221)
Name: NF17556_low_35
Description: NF17556
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17556_low_35 |
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Alignment Details
Target: chr5 (Bit Score: 184; Significance: 1e-100; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 19 - 202
Target Start/End: Complemental strand, 30757210 - 30757027
Alignment:
| Q |
19 |
gaacattggttagccataatgagcgccacacatatgttttagagctggtttctcattaaactgaagcagaaggtgatgaaacttcttttatttttgttgt |
118 |
Q |
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| T |
30757210 |
gaacattggttagccataatgagcgccacacatatgttttagagctggtttctcattaaactgaagcagaaggtgatgaaacttcttttatttttgttgt |
30757111 |
T |
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| Q |
119 |
ttctaaaagtcgaaagaagaaaaataatcgcgaagcatatccaaccccgctcaaagggttcacgttcaccatcatctattcgcc |
202 |
Q |
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| T |
30757110 |
ttctaaaagtcgaaagaagaaaaataatcgcgaagcatatccaaccccgctcaaagggttcacgttcaccatcatctattcgcc |
30757027 |
T |
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