View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17557_high_4 (Length: 358)
Name: NF17557_high_4
Description: NF17557
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17557_high_4 |
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Alignment Details
Target: chr4 (Bit Score: 128; Significance: 4e-66; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 13 - 165
Target Start/End: Original strand, 9861126 - 9861278
Alignment:
| Q |
13 |
aatattgataaagcttgattgtgaacgagttgttcacaatgcagctagcttttcctttgcacacaatagtgaatatgtatcatggnnnnnnnttaatcac |
112 |
Q |
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| T |
9861126 |
aatattgataaagcttgattgtgaacgagttgttcacaatgccgctagcttttcctttgcacacaatagtgaatatgtatcatggaaaaaaattaatcac |
9861225 |
T |
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| Q |
113 |
cagcaagtttacaaattgaattgcctattacaaataatgaatgaacaatgaat |
165 |
Q |
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| T |
9861226 |
cagcaagtttacaaattgaattgcctattacaaataatgaatgaacaatgaat |
9861278 |
T |
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