View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17557_low_6 (Length: 256)
Name: NF17557_low_6
Description: NF17557
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17557_low_6 |
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Alignment Details
Target: chr4 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 97 - 238
Target Start/End: Complemental strand, 10361544 - 10361402
Alignment:
| Q |
97 |
ccactaacacattcttatttattatatattttaatcattttactgttcaaataatttcgtactataagaatattttagtaaataaaatacaaa-ggcacc |
195 |
Q |
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| T |
10361544 |
ccactaacacattcttatttattatatattttaatcattttactgttcaaataatttcgtactataaggatattttagtaaataaaatacaaagggcacc |
10361445 |
T |
|
| Q |
196 |
taatttgagaccaagaaagtagtaatattctaaagttattcat |
238 |
Q |
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| T |
10361444 |
taatttgagaccaagaaagtagtaatattctaaagttattcat |
10361402 |
T |
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