View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17557_low_7 (Length: 239)

Name: NF17557_low_7
Description: NF17557
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17557_low_7
NF17557_low_7
[»] chr1 (17 HSPs)
chr1 (1-120)||(1077850-1077970)
chr1 (1-120)||(25275480-25275600)
chr1 (1-120)||(25381969-25382089)
chr1 (1-120)||(25387936-25388056)
chr1 (1-120)||(50305803-50305923)
chr1 (45-120)||(44409606-44409681)
chr1 (6-119)||(27954768-27954881)
chr1 (11-120)||(31051150-31051259)
chr1 (11-120)||(31057650-31057759)
chr1 (50-120)||(12184080-12184150)
chr1 (11-120)||(34739592-34739701)
chr1 (11-120)||(8093290-8093399)
chr1 (29-119)||(33458371-33458459)
chr1 (8-115)||(24927209-24927317)
chr1 (11-104)||(38152402-38152495)
chr1 (29-95)||(4280191-4280258)
chr1 (8-114)||(24964145-24964252)
[»] chr3 (34 HSPs)
chr3 (1-121)||(26429851-26429972)
chr3 (1-120)||(11840159-11840279)
chr3 (1-120)||(42191654-42191774)
chr3 (1-120)||(42197596-42197716)
chr3 (1-120)||(10238646-10238766)
chr3 (1-120)||(10244768-10244888)
chr3 (1-120)||(17056225-17056345)
chr3 (1-120)||(55003835-55003955)
chr3 (11-119)||(11846421-11846530)
chr3 (123-221)||(53513928-53514026)
chr3 (11-120)||(10761095-10761204)
chr3 (11-120)||(10769414-10769523)
chr3 (11-120)||(23138861-23138970)
chr3 (1-120)||(17601967-17602087)
chr3 (29-120)||(30051562-30051654)
chr3 (45-120)||(9586491-9586566)
chr3 (11-120)||(38449508-38449617)
chr3 (29-120)||(28964486-28964578)
chr3 (11-120)||(38455995-38456104)
chr3 (29-120)||(49151218-49151310)
chr3 (29-120)||(49157285-49157377)
chr3 (157-221)||(53510319-53510383)
chr3 (11-108)||(53071696-53071793)
chr3 (29-120)||(8331393-8331485)
chr3 (31-120)||(24643954-24644044)
chr3 (45-121)||(12109145-12109221)
chr3 (23-119)||(34300045-34300142)
chr3 (29-119)||(8474596-8474688)
chr3 (39-119)||(2982699-2982779)
chr3 (124-158)||(53524291-53524325)
chr3 (79-111)||(46656306-46656338)
chr3 (175-221)||(53547857-53547903)
chr3 (181-217)||(20196817-20196853)
chr3 (123-155)||(20196876-20196908)
[»] scaffold0208 (2 HSPs)
scaffold0208 (1-120)||(12001-12121)
scaffold0208 (1-120)||(6128-6248)
[»] chr8 (17 HSPs)
chr8 (1-120)||(32896618-32896738)
chr8 (1-120)||(42993433-42993553)
chr8 (1-120)||(32890494-32890614)
chr8 (1-120)||(36818578-36818698)
chr8 (11-119)||(5542605-5542714)
chr8 (1-120)||(9934889-9935009)
chr8 (30-120)||(10699635-10699726)
chr8 (11-120)||(14417567-14417676)
chr8 (11-120)||(10705444-10705553)
chr8 (29-120)||(39727746-39727838)
chr8 (29-120)||(42033403-42033495)
chr8 (8-114)||(1883278-1883385)
chr8 (11-119)||(39735983-39736091)
chr8 (29-120)||(22220189-22220281)
chr8 (40-116)||(17954116-17954192)
chr8 (11-68)||(30890535-30890593)
chr8 (37-108)||(33630872-33630943)
[»] chr7 (16 HSPs)
chr7 (1-120)||(28421392-28421512)
chr7 (1-120)||(5979609-5979730)
chr7 (11-121)||(5849135-5849245)
chr7 (11-120)||(351393-351502)
chr7 (11-120)||(26383275-26383384)
chr7 (11-119)||(3811613-3811721)
chr7 (29-116)||(35152990-35153078)
chr7 (29-120)||(43539601-43539693)
chr7 (11-120)||(338987-339096)
chr7 (11-120)||(3817755-3817864)
chr7 (29-121)||(35148470-35148564)
chr7 (11-120)||(22742374-22742483)
chr7 (47-121)||(8824416-8824490)
chr7 (60-114)||(7608060-7608114)
chr7 (39-90)||(30219547-30219598)
chr7 (11-83)||(26380751-26380823)
[»] chr6 (14 HSPs)
chr6 (1-120)||(4580755-4580875)
chr6 (1-120)||(25353819-25353937)
chr6 (11-119)||(21191314-21191423)
chr6 (1-120)||(25343233-25343351)
chr6 (11-119)||(21197485-21197594)
chr6 (45-120)||(30906059-30906134)
chr6 (11-120)||(8651248-8651357)
chr6 (23-120)||(17581210-17581308)
chr6 (11-120)||(21771009-21771118)
chr6 (29-121)||(21783787-21783880)
chr6 (29-120)||(6096916-6097008)
chr6 (8-115)||(12801979-12802087)
chr6 (11-93)||(13007348-13007431)
chr6 (45-114)||(1105925-1105994)
[»] chr5 (19 HSPs)
chr5 (1-120)||(12686612-12686732)
chr5 (1-120)||(12692714-12692834)
chr5 (1-120)||(32094655-32094775)
chr5 (1-120)||(32097456-32097575)
chr5 (11-120)||(14609737-14609846)
chr5 (11-120)||(41296885-41296994)
chr5 (11-117)||(20499747-20499853)
chr5 (29-120)||(28525847-28525939)
chr5 (29-120)||(28531943-28532035)
chr5 (29-119)||(30384845-30384936)
chr5 (11-120)||(7389992-7390101)
chr5 (29-120)||(30771889-30771978)
chr5 (8-115)||(19060214-19060322)
chr5 (8-93)||(22647928-22648014)
chr5 (8-114)||(19066548-19066655)
chr5 (39-119)||(25408437-25408514)
chr5 (46-120)||(33753710-33753784)
chr5 (39-96)||(8706859-8706916)
chr5 (45-89)||(26318721-26318765)
[»] chr2 (19 HSPs)
chr2 (1-120)||(13455705-13455825)
chr2 (1-120)||(13461646-13461766)
chr2 (1-120)||(35085113-35085233)
chr2 (2-120)||(36750020-36750139)
chr2 (1-120)||(35091086-35091206)
chr2 (11-121)||(28683389-28683499)
chr2 (11-120)||(30964933-30965042)
chr2 (11-120)||(35439815-35439924)
chr2 (15-120)||(23283849-23283955)
chr2 (8-121)||(23343168-23343282)
chr2 (11-120)||(19879200-19879309)
chr2 (11-120)||(31001982-31002091)
chr2 (11-120)||(35442277-35442386)
chr2 (11-120)||(44717250-44717359)
chr2 (11-120)||(13150134-13150243)
chr2 (11-91)||(31007989-31008069)
chr2 (29-102)||(7771648-7771722)
chr2 (65-113)||(38731147-38731195)
chr2 (86-120)||(11049012-11049046)
[»] chr4 (22 HSPs)
chr4 (2-120)||(24287593-24287712)
chr4 (11-120)||(10733794-10733903)
chr4 (11-120)||(10947563-10947672)
chr4 (11-120)||(26957248-26957357)
chr4 (12-120)||(10739782-10739890)
chr4 (12-120)||(10953551-10953659)
chr4 (29-120)||(6257666-6257758)
chr4 (11-120)||(48160565-48160674)
chr4 (11-120)||(48166784-48166893)
chr4 (39-120)||(26972027-26972108)
chr4 (29-119)||(17627236-17627327)
chr4 (49-120)||(33461797-33461868)
chr4 (45-120)||(50168201-50168276)
chr4 (29-94)||(50426879-50426945)
chr4 (49-120)||(33458672-33458743)
chr4 (14-115)||(49976213-49976314)
chr4 (29-103)||(35177413-35177492)
chr4 (11-114)||(4631987-4632091)
chr4 (29-107)||(44832076-44832155)
chr4 (82-120)||(532100-532138)
chr4 (81-119)||(19686866-19686905)
chr4 (39-100)||(19686790-19686854)
[»] scaffold0363 (1 HSPs)
scaffold0363 (11-120)||(1043-1152)
[»] scaffold1114 (1 HSPs)
scaffold1114 (29-120)||(669-761)
[»] scaffold0185 (1 HSPs)
scaffold0185 (11-117)||(5576-5682)
[»] scaffold0064 (1 HSPs)
scaffold0064 (29-120)||(13879-13971)
[»] scaffold0440 (1 HSPs)
scaffold0440 (11-120)||(1632-1741)
[»] scaffold0012 (1 HSPs)
scaffold0012 (11-120)||(173334-173443)
[»] scaffold0449 (1 HSPs)
scaffold0449 (69-119)||(1281-1331)
[»] scaffold0085 (1 HSPs)
scaffold0085 (31-116)||(38038-38124)


Alignment Details
Target: chr1 (Bit Score: 101; Significance: 3e-50; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 1077970 - 1077850
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    ||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1077970 ttatccaaaatagaaatctaattagtcttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataattattattacgat 1077871  T
Q  100 atttgcccacataatgatatt 120  Q
    |||||||||||||||||||||    
T  1077870 atttgcccacataatgatatt 1077850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 25275480 - 25275600
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    ||||||||||||||||||||||||| | |||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25275480 ttatccaaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataattattattacgat 25275579  T
Q  100 atttgcccacataatgatatt 120  Q
    |||||||||||||||||||||    
T  25275580 atttgcccacataatgatatt 25275600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 25381969 - 25382089
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    ||||||||||||||||||||||||| | |||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25381969 ttatccaaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataattattattacgat 25382068  T
Q  100 atttgcccacataatgatatt 120  Q
    |||||||||||||||||||||    
T  25382069 atttgcccacataatgatatt 25382089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 25387936 - 25388056
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    ||||||||||||||||||||||||| | |||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25387936 ttatccaaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaataaataatataattattattacgat 25388035  T
Q  100 atttgcccacataatgatatt 120  Q
    |||||||||||||||||||||    
T  25388036 atttgcccacataatgatatt 25388056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 50305923 - 50305803
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    ||||||||||||||||||||||||| | |||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  50305923 ttatccaaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataattattattacgat 50305824  T
Q  100 atttgcccacataatgatatt 120  Q
    |||||||||||||||||||||    
T  50305823 atttgcccacataatgatatt 50305803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 45 - 120
Target Start/End: Complemental strand, 44409681 - 44409606
Alignment:
Q  45 actaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatatt 120  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  44409681 actaatcaattaaggctcacaattgataaatagctaatataattattattacgatatttgcccacataatgatatt 44409606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 27954881 - 27954768
Alignment:
Q  6 caaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttg 104  Q
    |||| |||||||||||| || | |||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||    
T  27954881 caaattagaaatctaat-agccttattacttaatttgatcactaatcaattaagcctcacaattgataaataactaatataattagtattacgatttttg 27954783  T
Q  105 cccacataatgatat 119  Q
    ||||| |||||||||    
T  27954782 cccacgtaatgatat 27954768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 31051259 - 31051150
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | |||||||||||| ||| ||||||||| |||||| ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  31051259 tagaaatctaat-agccttattacttaatttgatcactaatcaactaaggcccacaattgataaatagctaatataattattgttacgatatttgcccac 31051161  T
Q  110 ataatgatatt 120  Q
    |||||||||||    
T  31051160 ataatgatatt 31051150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 31057759 - 31057650
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | |||||||||||| ||| ||||||||| |||||| ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  31057759 tagaaatctaat-agccttattacttaatttgatcactaatcaactaaggcccacaattgataaatagctaatataattattgttacgatatttgcccac 31057661  T
Q  110 ataatgatatt 120  Q
    |||||||||||    
T  31057660 ataatgatatt 31057650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 50 - 120
Target Start/End: Original strand, 12184080 - 12184150
Alignment:
Q  50 tcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatatt 120  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12184080 tcaattaaggctctaaattgataaataactaatataattattattacgatatttgcccacataatgatatt 12184150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 34739701 - 34739592
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | |||||||||||| ||| ||||||||| |||||| | ||||| ||||||| |||||||||||||| ||||||||||| |||||    
T  34739701 tagaaatctaat-agccttattacttaatttgatcactaatcaactaaggccctcaatttataaatagctaatataattattgttacgatattttcccac 34739603  T
Q  110 ataatgatatt 120  Q
    |||||||||||    
T  34739602 ataatgatatt 34739592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 8093290 - 8093399
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | |||||||||||| ||| | ||||||| |||| |||||||||||||||||||||||||||||||| |||||  ||||||||      
T  8093290 tagaaatctaat-agccttattacttaatttgattattaatcaactaagactcacaattgataaataactaatataattattgttacggcatttgcccgg 8093388  T
Q  110 ataatgatatt 120  Q
    |||||||||||    
T  8093389 ataatgatatt 8093399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 29 - 119
Target Start/End: Original strand, 33458371 - 33458459
Alignment:
Q  29 tattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatat 119  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||| ||||||   |||||||| ||||||| ||||||    
T  33458371 tattacttaatttgatcactaatcaattaaggctcacaattgataaataaccaatataactattat---gatatttgtccacatactgatat 33458459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 24927209 - 24927317
Alignment:
Q  8 aaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcc 106  Q
    |||||||||||| || || | | |||||||||| ||| |||||||||||||| |||  |||||||||||| ||||||||||||||||   ||||||||||    
T  24927209 aaatagaaatcttataagccttgttacttaatttgatcactaatcaattaagactccaaattgataaatagctaatataattattatagagatatttgcc 24927308  T
Q  107 cacataatg 115  Q
    |||||||||    
T  24927309 cacataatg 24927317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 38152402 - 38152495
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttg 104  Q
    |||||||||||| || | |||||||||||| ||| ||||||||| |||||| |||||||||||||||| ||||||||||||| |||| |||||||    
T  38152402 tagaaatctaat-agccttattacttaatttgatcactaatcaactaaggcccacaattgataaataattaatataattattgttacaatatttg 38152495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 4280191 - 4280258
Alignment:
Q  29 tattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattatta 95  Q
    |||||||||||| ||| ||||||||||||||| ||||||||||||||||  |||||||||||||||||    
T  4280191 tattacttaatttgatcactaatcaattaaggttcacaattgataaatagttaatataattattatta 4280258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 24964145 - 24964252
Alignment:
Q  8 aaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcc 106  Q
    |||||||||||| || ||   |||||||||||| ||| |||||||||||||||||   |||||||||||| ||||||||||||||||   ||||||| ||    
T  24964145 aaatagaaatcttataagctttattacttaatttgatcactaatcaattaaggcttcaaattgataaatagctaatataattattatagagatatttacc 24964244  T
Q  107 cacataat 114  Q
    ||||||||    
T  24964245 cacataat 24964252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 2e-48; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 26429851 - 26429972
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    ||||||||||||||||||||||||| | |||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26429851 ttatccaaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataattattattacgat 26429950  T
Q  100 atttgcccacataatgatatta 121  Q
    ||||||||||||||||||||||    
T  26429951 atttgcccacataatgatatta 26429972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 11840159 - 11840279
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    ||||||||||||||||||||||||| | |||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  11840159 ttatccaaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataattattattacgat 11840258  T
Q  100 atttgcccacataatgatatt 120  Q
    |||||||||||||||||||||    
T  11840259 atttgcccacataatgatatt 11840279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 42191654 - 42191774
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    ||||||||||||||||||||||||| | |||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  42191654 ttatccaaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataattattattacgat 42191753  T
Q  100 atttgcccacataatgatatt 120  Q
    |||||||||||||||||||||    
T  42191754 atttgcccacataatgatatt 42191774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 42197596 - 42197716
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    ||||||||||||||||||||||||| | |||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  42197596 ttatccaaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataattattattacgat 42197695  T
Q  100 atttgcccacataatgatatt 120  Q
    |||||||||||||||||||||    
T  42197696 atttgcccacataatgatatt 42197716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 10238646 - 10238766
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    ||||||||||||||||||||||||| | |||||||||||| ||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10238646 ttatccaaaatagaaatctaattagccttattacttaatttgaacactaatcaattaaggctcacaattgataaatagctaatataattattattacgat 10238745  T
Q  100 atttgcccacataatgatatt 120  Q
    |||||||||||||||||||||    
T  10238746 atttgcccacataatgatatt 10238766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 10244768 - 10244888
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    ||||||||||||||||||||||||| | |||||||||||| ||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10244768 ttatccaaaatagaaatctaattagccttattacttaatttgaacactaatcaattaaggctcacaattgataaatagctaatataattattattacgat 10244867  T
Q  100 atttgcccacataatgatatt 120  Q
    |||||||||||||||||||||    
T  10244868 atttgcccacataatgatatt 10244888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 17056225 - 17056345
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    ||||||||||||||||||||||||| | |||||||||||| ||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  17056225 ttatccaaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagataatataattattattacgat 17056324  T
Q  100 atttgcccacataatgatatt 120  Q
    |||||||||||||||||||||    
T  17056325 atttgcccacataatgatatt 17056345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 55003835 - 55003955
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    ||||||||||||||||||||||||| | |||||||||||| ||| |||||| |||||||||||  |||||||||||||||||||||||||||||||||||    
T  55003835 ttatccaaaatagaaatctaattagccttattacttaatttgatcactaataaattaaggctctaaattgataaataactaatataattattattacgat 55003934  T
Q  100 atttgcccacataatgatatt 120  Q
    ||||| |||||||||||||||    
T  55003935 atttgtccacataatgatatt 55003955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 11846421 - 11846530
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    ||||||||||||||| | |||||||||||| ||| ||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  11846421 tagaaatctaattagccttattacttaatttgatcactaatccattaaggctctaaattgataaataactaatataattattattacgatatttgcccac 11846520  T
Q  110 ataatgatat 119  Q
    ||||||||||    
T  11846521 ataatgatat 11846530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 53514026 - 53513928
Alignment:
Q  123 gagtcgggcagaaatttgagcctcattacgattacaccgctggtggggtcgtcactaagaatggaggcccgcgagttgctagagttcttatgtatctgt 221  Q
    |||||||||| |||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  53514026 gagtcgggcaaaaatgtgagcctcattacgattacacctctgatggggtcgtcactaagaatggaggcccacgagttgctacagttcttatgtatctgt 53513928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 10761095 - 10761204
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | |||||||||||| ||| ||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  10761095 tagaaatctaat-agccttattacttaatttgatcactaatcaactaaggctcacaattgataaatagctaatataattattgttacgatatttgcccac 10761193  T
Q  110 ataatgatatt 120  Q
    |||||||||||    
T  10761194 ataatgatatt 10761204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 10769414 - 10769523
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | |||||||||||| ||| ||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  10769414 tagaaatctaat-agccttattacttaatttgatcactaatcaactaaggctcacaattgataaatagctaatataattattgttacgatatttgcccac 10769512  T
Q  110 ataatgatatt 120  Q
    |||||||||||    
T  10769513 ataatgatatt 10769523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 23138861 - 23138970
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| |||| |||||||||||| ||| ||||||||| |||| ||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  23138861 tagaaatctaat-agtcttattacttaatttgatcactaatcaactaagactcacaattgataaatagctaatataattattgttacgatatttgcccac 23138959  T
Q  110 ataatgatatt 120  Q
    |||||||||||    
T  23138960 ataatgatatt 23138970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 17601967 - 17602087
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    ||||||||||||||||||||||||| | |||||||||||| ||  ||||||||||||||||||  |||||||||||||||||||||||||||| || |||    
T  17601967 ttatccaaaatagaaatctaattagccttattacttaatttgaccactaatcaattaaggctctaaattgataaataactaatataattattactatgat 17602066  T
Q  100 atttgcccacataatgatatt 120  Q
    |||| | |||||| |||||||    
T  17602067 atttacgcacatagtgatatt 17602087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 30051562 - 30051654
Alignment:
Q  29 tattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatatt 120  Q
    |||||||||||| ||| ||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  30051562 tattacttaatttgatcactaatcaactaaggctcacaattgataaatagctaatataattattgttacgatatttgcccacataatgatatt 30051654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 45 - 120
Target Start/End: Original strand, 9586491 - 9586566
Alignment:
Q  45 actaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatatt 120  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9586491 actaatcaactaaggctcacaattgataaatagctaatataattattattacgatatttgcccacataatgatatt 9586566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 38449508 - 38449617
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | |||||||||||| ||| ||||||||| |||| ||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  38449508 tagaaatctaat-agccttattacttaatttgatcactaatcaactaagactcacaattgataaatagctaatataattattgttacgatatttgcccac 38449606  T
Q  110 ataatgatatt 120  Q
    |||||||||||    
T  38449607 ataatgatatt 38449617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 28964578 - 28964486
Alignment:
Q  29 tattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatatt 120  Q
    |||||||||||| ||| ||||||||| |||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  28964578 tattacttaatttgatcactaatcaactaaggctcacaatttataaatagctaatataattattgttacgatatttgcccacataatgatatt 28964486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 38455995 - 38456104
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | |||||||||||| ||| ||||||||| |||  ||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  38455995 tagaaatctaat-agccttattacttaatttgatcactaatcaactaacactcacaattgataaatagctaatataattattgttacgatatttgcccac 38456093  T
Q  110 ataatgatatt 120  Q
    |||||||||||    
T  38456094 ataatgatatt 38456104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 49151310 - 49151218
Alignment:
Q  29 tattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatatt 120  Q
    |||||||||||| ||| ||||||||| |||||| ||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||    
T  49151310 tattacttaatttgatcactaatcaactaaggcccacaattgataaatagctaatataattattgttacgatattttcccacataatgatatt 49151218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 49157377 - 49157285
Alignment:
Q  29 tattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatatt 120  Q
    |||||||||||| ||| ||||||||| |||||| ||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||    
T  49157377 tattacttaatttgatcactaatcaactaaggcccacaattgataaatagctaatataattattgttacgatattttcccacataatgatatt 49157285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 53510383 - 53510319
Alignment:
Q  157 caccgctggtggggtcgtcactaagaatggaggcccgcgagttgctagagttcttatgtatctgt 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  53510383 caccgctggtggggtcgtcactaagaatggaggcccgcgagttgctacagttcttatgtatctgt 53510319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 53071696 - 53071793
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgccca 108  Q
    |||||||||||| || | |||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  53071696 tagaaatctaat-agccttattacttaatttgatcactaatcaactaaggctcacaattgataaataactaatataattattgttatgatatttgccca 53071793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 8331485 - 8331393
Alignment:
Q  29 tattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatatt 120  Q
    |||||||||||| ||| ||||||||| |||||  ||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  8331485 tattacttaatttgatcactaatcaactaaggtccacaattgataaatagctaatataattattgttacgatatttgtccacataatgatatt 8331393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 120
Target Start/End: Original strand, 24643954 - 24644044
Alignment:
Q  31 ttacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatatt 120  Q
    |||||||||| ||| ||||||||| |||| ||||||||||||||||||||||| |||||||| ||| |||||||||||||||||| |||||    
T  24643954 ttacttaatttgatcactaatcaactaagactcacaattgataaataactaatgtaattattgttaggatatttgcccacataataatatt 24644044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 12109145 - 12109221
Alignment:
Q  45 actaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatatta 121  Q
    ||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||| | |||||||| ||||||    
T  12109145 actaatcaattaaagatcacaattgataaataactaatacaattattattacgatatttactcacataataatatta 12109221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 119
Target Start/End: Complemental strand, 34300142 - 34300045
Alignment:
Q  23 tagtcctattacttaattga-taactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatat 119  Q
    ||||| |||||||||||| | | |||||||||||||  |||||||||||||||||  ||||||||||||||||| ||| ||||||||| |||||||||    
T  34300142 tagtcttattacttaattcaattactaatcaattaattctcacaattgataaatagttaatataattattattatgatgtttgcccacgtaatgatat 34300045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 29 - 119
Target Start/End: Original strand, 8474596 - 8474688
Alignment:
Q  29 tattacttaatt-gataactaatcaattaa-ggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatat 119  Q
    |||||||||||| ||| ||||||||||||| ||| |||||||||| || |  ||||||||||||||||||||||||||  |||||||||||||    
T  8474596 tattacttaatttgatcactaatcaattaaaggcccacaattgattaaaagttaatataattattattacgatatttgttcacataatgatat 8474688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 119
Target Start/End: Original strand, 2982699 - 2982779
Alignment:
Q  39 ttgataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatat 119  Q
    ||||| ||||||||| |||||||| | |||||||||||  | |||||||||||||||| |||||||  | |||||||||||    
T  2982699 ttgatcactaatcaaataaggctcgctattgataaatagattatataattattattacaatatttgttcgcataatgatat 2982779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 158
Target Start/End: Complemental strand, 53524325 - 53524291
Alignment:
Q  124 agtcgggcagaaatttgagcctcattacgattaca 158  Q
    |||||||||||||||||||||||||||||||||||    
T  53524325 agtcgggcagaaatttgagcctcattacgattaca 53524291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 111
Target Start/End: Complemental strand, 46656338 - 46656306
Alignment:
Q  79 taatataattattattacgatatttgcccacat 111  Q
    |||||||||||||||||||||||||||||||||    
T  46656338 taatataattattattacgatatttgcccacat 46656306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 53547903 - 53547857
Alignment:
Q  175 cactaagaatggaggcccgcgagttgctagagttcttatgtatctgt 221  Q
    |||||||||||||||||  |||||||| | |||||||||||||||||    
T  53547903 cactaagaatggaggccaacgagttgcaacagttcttatgtatctgt 53547857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 20196853 - 20196817
Alignment:
Q  181 gaatggaggcccgcgagttgctagagttcttatgtat 217  Q
    ||||||||||||||||||||||| | |||||||||||    
T  20196853 gaatggaggcccgcgagttgctacatttcttatgtat 20196817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 20196908 - 20196876
Alignment:
Q  123 gagtcgggcagaaatttgagcctcattacgatt 155  Q
    |||||||||||||||||| ||||||||||||||    
T  20196908 gagtcgggcagaaatttgtgcctcattacgatt 20196876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 97; Significance: 8e-48; HSPs: 2)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 12121 - 12001
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    ||||||||||||||||||||||||| | |||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12121 ttatccaaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataattattattacgat 12022  T
Q  100 atttgcccacataatgatatt 120  Q
    |||||||||||||||||||||    
T  12021 atttgcccacataatgatatt 12001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 6248 - 6128
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    ||||||||||||||||||||||||| | |||||||||||| ||| |||||||||||||||||   |||||||||||||||||||||||||||||||||||    
T  6248 ttatccaaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctttaaattgataaataactaatataattattattacgat 6149  T
Q  100 atttgcccacataatgatatt 120  Q
    |||||||||||||||||||||    
T  6148 atttgcccacataatgatatt 6128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 97; Significance: 8e-48; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 32896738 - 32896618
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    ||||||||||||||||||||||||| | |||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32896738 ttatccaaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataattattattacgat 32896639  T
Q  100 atttgcccacataatgatatt 120  Q
    |||||||||||||||||||||    
T  32896638 atttgcccacataatgatatt 32896618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 42993433 - 42993553
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    ||||||||||||||||||||||||| | |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42993433 ttatccaaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaataactaatataattattattacgat 42993532  T
Q  100 atttgcccacataatgatatt 120  Q
    ||||||||| |||||||||||    
T  42993533 atttgcccatataatgatatt 42993553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 32890614 - 32890494
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    ||||||||||||||||||||||||| | |||||||||||| ||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  32890614 ttatccaaaatagaaatctaattagccttattacttaatttgatcactaatcaattaagggtcacaattgataaatagctaatataattattattacgat 32890515  T
Q  100 atttgcccacataatgatatt 120  Q
    |||||||||||||||||||||    
T  32890514 atttgcccacataatgatatt 32890494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 36818698 - 36818578
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    ||||||||||||||||||||||||  | |||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  36818698 ttatccaaaatagaaatctaattaaccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataattattattacgat 36818599  T
Q  100 atttgcccacataatgatatt 120  Q
    |||||||||||||||||||||    
T  36818598 atttgcccacataatgatatt 36818578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 5542605 - 5542714
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    ||||||||||||||||| |||||||||||| ||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  5542605 tagaaatctaattagtcttattacttaatttgatcactaatcaattaaggctctaaattgataaataactaatataattattattacgatatttgcccac 5542704  T
Q  110 ataatgatat 119  Q
    ||||||||||    
T  5542705 ataatgatat 5542714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 9935009 - 9934889
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    |||||||||||||||||||||||||   |||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  9935009 ttatccaaaatagaaatctaattagctttattacttaatttgatcactaatcaattaagactcacaattgataaataactaatataattattattacaat 9934910  T
Q  100 atttgcccacataatgatatt 120  Q
    |||| |||||||||| |||||    
T  9934909 atttacccacataatcatatt 9934889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 10699726 - 10699635
Alignment:
Q  30 attacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatatt 120  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  10699726 attacttaatttgatcactaatcaattaaggctcacaattgataaataactagtataattattgttacgatatttgcccacataatgatatt 10699635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 14417676 - 14417567
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | |||||||||||| ||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14417676 tagaaatctaat-agccttattacttaatttgatcactaatcaactaagactcacaattgataaataactaatataattattattacgatattttcccac 14417578  T
Q  110 ataatgatatt 120  Q
    |||||||||||    
T  14417577 ataatgatatt 14417567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 10705553 - 10705444
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| |||  |||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||    
T  10705553 tagaaatctaat-agttttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataattattgttacgatattcgcccac 10705455  T
Q  110 ataatgatatt 120  Q
    | |||||||||    
T  10705454 aaaatgatatt 10705444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 39727746 - 39727838
Alignment:
Q  29 tattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatatt 120  Q
    |||||||||||| ||| ||||||||| |||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  39727746 tattacttaatttgatcactaatcaactaagtctcacaattgataaatagctaatataattattgttacgatatttgcccacataatgatatt 39727838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 42033495 - 42033403
Alignment:
Q  29 tattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatatt 120  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||||    
T  42033495 tattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataattattgttacgatatttacccgcataatgatatt 42033403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 1883278 - 1883385
Alignment:
Q  8 aaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcc 106  Q
    ||||||||||||||| || | |||||||||||| ||| ||||||||| ||||||||  |||||||||||| |||||||||||||||||||||||||||||    
T  1883278 aaatagaaatctaataagccttattacttaatttgatcactaatcaagtaaggctccaaattgataaatagctaatataattattattacgatatttgcc 1883377  T
Q  107 cacataat 114  Q
    | ||||||    
T  1883378 cgcataat 1883385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 39735983 - 39736091
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | |||||||||||| ||| ||||||||| ||| |||||||||||||||||| |||||||||||||| |||||||||||| ||||    
T  39735983 tagaaatctaat-agccttattacttaatttgatcactaatcaactaatgctcacaattgataaatagctaatataattattgttacgatatttgtccac 39736081  T
Q  110 ataatgatat 119  Q
    ||||| ||||    
T  39736082 ataataatat 39736091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 22220189 - 22220281
Alignment:
Q  29 tattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatatt 120  Q
    |||||||||||| ||| ||||||||| ||||||| || ||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||    
T  22220189 tattacttaatttgatcactaatcaactaaggcttacgattgataaatagctaatataactattgttacgatatttgcccacataatgatatt 22220281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 116
Target Start/End: Complemental strand, 17954192 - 17954116
Alignment:
Q  40 tgataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatga 116  Q
    |||| |||||||||||||| |||  |||||||||||| |||||||||||||||| | ||||||| |||||| |||||    
T  17954192 tgatcactaatcaattaagtctccaaattgataaatagctaatataattattataaagatattttcccacaaaatga 17954116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 30890535 - 30890593
Alignment:
Q  11 tagaaatctaattagtcctattacttaa-ttgataactaatcaattaaggctcacaatt 68  Q
    ||||||||||||||||| ||||| |||| ||||| |||||||||||||| |||||||||    
T  30890535 tagaaatctaattagtcttattaattaatttgatcactaatcaattaagactcacaatt 30890593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 108
Target Start/End: Complemental strand, 33630943 - 33630872
Alignment:
Q  37 aattgataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgccca 108  Q
    ||||||| | ||||| |||||| ||| ||| | ||||||||||||||||| |||||| | ||||||||||||    
T  33630943 aattgatcattaatcgattaagactctcaaattataaataactaatataaatattataaagatatttgccca 33630872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 8e-48; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 28421392 - 28421512
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    ||||||||||||||||||||||||| | |||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28421392 ttatccaaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataattattattacgat 28421491  T
Q  100 atttgcccacataatgatatt 120  Q
    |||||||||||||||||||||    
T  28421492 atttgcccacataatgatatt 28421512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 5979609 - 5979730
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaagg-ctcacaattgataaataactaatataattattattacga 98  Q
    ||||||||||||||||||||||||| | |||||||||||| ||| ||||||||||||||| |||  ||||||||||||||||||||||||||||||||||    
T  5979609 ttatccaaaatagaaatctaattagccttattacttaatttgatcactaatcaattaagggctctaaattgataaataactaatataattattattacga 5979708  T
Q  99 tatttgcccacataatgatatt 120  Q
    ||||||||||||||||||||||    
T  5979709 tatttgcccacataatgatatt 5979730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 5849245 - 5849135
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | |||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  5849245 tagaaatctaat-agccttattacttaatttgatcactaatcaactaaggctcacaattgataaataactaatataattattgttacgatatttacccac 5849147  T
Q  110 ataatgatatta 121  Q
    ||||||||||||    
T  5849146 ataatgatatta 5849135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 351502 - 351393
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | |||||||||||| ||| ||||||||| ||||||| |||||||||||||| |||||||||||||| |||||||||||||||||    
T  351502 tagaaatctaat-agccttattacttaatttgatcactaatcaactaaggctgacaattgataaatagctaatataattattgttacgatatttgcccac 351404  T
Q  110 ataatgatatt 120  Q
    |||||||||||    
T  351403 ataatgatatt 351393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 26383384 - 26383275
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | |||||||||||| ||| ||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  26383384 tagaaatctaat-agccttattacttaatttgatcactaatcaactaaggctcacaattgataaatagctaatataattattattatgatatttgcccac 26383286  T
Q  110 ataatgatatt 120  Q
    | |||||||||    
T  26383285 aaaatgatatt 26383275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 3811613 - 3811721
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | |||||||||||| ||| ||||||||| |||||| ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  3811613 tagaaatctaat-agccttattacttaatttgatcactaatcaactaaggcccacaattgataaatagctaatataattattgttacgatatttgcccac 3811711  T
Q  110 ataatgatat 119  Q
    ||||||||||    
T  3811712 ataatgatat 3811721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 116
Target Start/End: Original strand, 35152990 - 35153078
Alignment:
Q  29 tattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatga 116  Q
    |||||||||||| ||| ||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  35152990 tattacttaatttgatcactaatcaactaaggctcacaattgataaatatctaatataattattgttacgatatttgcccacataatga 35153078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 43539693 - 43539601
Alignment:
Q  29 tattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatatt 120  Q
    |||||||||||| ||| |||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  43539693 tattacttaatttgatcactaatcaattaaggctcacaaatgataaataattaatataattatttttacgatatttgcacacataatgatatt 43539601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 339096 - 338987
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | |||||||||||| ||| ||||||||| ||||||| |||||||||||||| |||||||||||||| ||| |||||||||||||    
T  339096 tagaaatctaat-agccttattacttaatttgatcactaatcaactaaggctgacaattgataaatagctaatataattattgttatgatatttgcccac 338998  T
Q  110 ataatgatatt 120  Q
    |||||||||||    
T  338997 ataatgatatt 338987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 3817755 - 3817864
Alignment:
Q  11 tagaaatctaattagtcctattacttaattg-ataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | ||||||||||||  || ||||||||| |||||| ||||||||||||||| |||||||||||||| |||||||||||||| ||    
T  3817755 tagaaatctaat-agccttattacttaatttcatcactaatcaactaaggcccacaattgataaatagctaatataattattgttacgatatttgcctac 3817853  T
Q  110 ataatgatatt 120  Q
    |||||||||||    
T  3817854 ataatgatatt 3817864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 35148470 - 35148564
Alignment:
Q  29 tattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttg-cccacataatgatatta 121  Q
    |||||||||||| ||| ||||||||| ||||||||| |||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||    
T  35148470 tattacttaatttgatcactaatcaactaaggctcataattgataaatagctaatataattattgttacgatatttgccccacataatgatatta 35148564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 22742374 - 22742483
Alignment:
Q  11 tagaaatctaattagtcctattacttaattg-ataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | ||||||||||||  || ||||||||| ||||||||||| ||||||||||||||||||||||||| ||||| |||||||| ||    
T  22742374 tagaaatctaat-agccttattacttaattttatcactaatcaactaaggctcacagttgataaataactaatataattattgttacggtatttgcctac 22742472  T
Q  110 ataatgatatt 120  Q
    ||||| |||||    
T  22742473 ataataatatt 22742483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 121
Target Start/End: Complemental strand, 8824490 - 8824416
Alignment:
Q  47 taatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatatta 121  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||| | |||||||||| ||||||||| ||||    
T  8824490 taatcaattaagcctcacaattgataaatagctaatataattattataaagatatttgcctacataatgacatta 8824416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 114
Target Start/End: Complemental strand, 7608114 - 7608060
Alignment:
Q  60 ctcacaattgataaataactaatataattattattacgatatttgcccacataat 114  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||| |||||    
T  7608114 ctcacaattgataaataactgatataattattattatgatatttgcccatataat 7608060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 30219547 - 30219598
Alignment:
Q  39 ttgataactaatcaattaaggctcacaattgataaataactaatataattat 90  Q
    ||||| |||||||||||||||||||||||| ||||||||||| ||| |||||    
T  30219547 ttgatcactaatcaattaaggctcacaattaataaataactactattattat 30219598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 26380823 - 26380751
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaata 83  Q
    |||||||||||| || | ||||| |||||| ||| ||||||||| |||||||||||||||||||||| ||||||    
T  26380823 tagaaatctaat-agccttattatttaatttgatcactaatcaactaaggctcacaattgataaatagctaata 26380751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 8e-48; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 4580755 - 4580875
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    ||||||||||||||||||||||||| | |||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  4580755 ttatccaaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataattattattacgat 4580854  T
Q  100 atttgcccacataatgatatt 120  Q
    |||||||||||||||||||||    
T  4580855 atttgcccacataatgatatt 4580875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 25353937 - 25353819
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    ||||||||||||  ||||||||||| | |||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25353937 ttatccaaaata--aatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataattattattacgat 25353840  T
Q  100 atttgcccacataatgatatt 120  Q
    |||||||||||||||||||||    
T  25353839 atttgcccacataatgatatt 25353819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 21191314 - 21191423
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    ||||||||||||||| | |||||||||||| ||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  21191314 tagaaatctaattagccatattacttaatttgatcactaatcaattaaggctctaaattgataaataactaatataattattattacgatatttgcccac 21191413  T
Q  110 ataatgatat 119  Q
    ||||||||||    
T  21191414 ataatgatat 21191423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 25343351 - 25343233
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaattga-taactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    ||||||||||||  ||||||||||| | |||||||||||| | | ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  25343351 ttatccaaaata--aatctaattagccttattacttaatttaatcactaatcaattaaggttcacaattgataaatagctaatataattattattacgat 25343254  T
Q  100 atttgcccacataatgatatt 120  Q
    |||||||||||||||||||||    
T  25343253 atttgcccacataatgatatt 25343233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 21197485 - 21197594
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    ||||||||||||||| | |||||||||||| ||| |||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||| |||||    
T  21197485 tagaaatctaattagccttattacttaatttgatcactaatcagttaaggctctaaattgataaataactaatataattattattacgatatttacccac 21197584  T
Q  110 ataatgatat 119  Q
    ||||||||||    
T  21197585 ataatgatat 21197594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 45 - 120
Target Start/End: Original strand, 30906059 - 30906134
Alignment:
Q  45 actaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatatt 120  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30906059 actaatcaactaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatatt 30906134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 8651248 - 8651357
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| |||| |||||||||||| ||| ||||||||| |||| ||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  8651248 tagaaatctaat-agtcttattacttaatttgatcactaatcaactaagactcacaattgataaatagctaatataattattgttacgatatttgcccac 8651346  T
Q  110 ataatgatatt 120  Q
    |||||||||||    
T  8651347 ataatgatatt 8651357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 17581308 - 17581210
Alignment:
Q  23 tagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatatt 120  Q
    ||||| |||||||||||| ||| ||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  17581308 tagtcttattacttaatttgatcactaatcaattgaggctcacaattgataaatagttaatataattattattacgatatttgcccacataatgatatt 17581210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 21771009 - 21771118
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| |||  |||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||    
T  21771009 tagaaatctaat-agttttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataattattgttacgatatttgtccac 21771107  T
Q  110 ataatgatatt 120  Q
    |||||||||||    
T  21771108 ataatgatatt 21771118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 21783787 - 21783880
Alignment:
Q  29 tattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatatta 121  Q
    |||||||||||| ||| ||||||| | |||| |||||||||||||||||  ||||||||||||||||||||||||| |||||||||| ||||||    
T  21783787 tattacttaatttgatcactaatccactaagactcacaattgataaatagttaatataattattattacgatatttacccacataataatatta 21783880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 6097008 - 6096916
Alignment:
Q  29 tattacttaattg-ataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatatt 120  Q
    ||||||||||||  || ||||||||| ||||||| |||||||| |||||| ||||||||||||| |||| |||||||||||||||||||||||    
T  6097008 tattacttaatttcatcactaatcaagtaaggctgacaattgacaaataagtaatataattattgttactatatttgcccacataatgatatt 6096916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 12801979 - 12802087
Alignment:
Q  8 aaatagaaatctaattagtcctattacttaa-ttgataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcc 106  Q
    ||||||||||||||| ||   |||||||||| ||||| ||||||||||||||||||  |||||| ||||| ||||||||||||||||   ||||||||||    
T  12801979 aaatagaaatctaataagctttattacttaaattgatcactaatcaattaaggctccaaattgacaaatagctaatataattattatagagatatttgcc 12802078  T
Q  107 cacataatg 115  Q
    ||| |||||    
T  12802079 cacgtaatg 12802087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 13007431 - 13007348
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattat 93  Q
    ||||||| ||||||||| ||||  |||||| ||| | |||||||||| |||||  |||||||||||||||||||||||||||||    
T  13007431 tagaaatttaattagtcttattgtttaatttgatcattaatcaattagggctccaaattgataaataactaatataattattat 13007348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 1105994 - 1105925
Alignment:
Q  45 actaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataat 114  Q
    ||||||||| |||  || |||||||||||||| | ||||||||||||| ||| |||||||||||||||||    
T  1105994 actaatcaaataaaacttacaattgataaatatcaaatataattattactaccatatttgcccacataat 1105925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 8e-48; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 12686612 - 12686732
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    ||||||||||||||||||||||||| | |||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12686612 ttatccaaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataattattattacgat 12686711  T
Q  100 atttgcccacataatgatatt 120  Q
    |||||||||||||||||||||    
T  12686712 atttgcccacataatgatatt 12686732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 12692714 - 12692834
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    ||||||||||||||||||||||||| | |||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12692714 ttatccaaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataattattattacgat 12692813  T
Q  100 atttgcccacataatgatatt 120  Q
    |||||||||||||||||||||    
T  12692814 atttgcccacataatgatatt 12692834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 32094655 - 32094775
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    ||||||||||||||||||||||||| | |||||||||||| ||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  32094655 ttatccaaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagttaatataattattattacgat 32094754  T
Q  100 atttgcccacataatgatatt 120  Q
    |||||||||||||||||||||    
T  32094755 atttgcccacataatgatatt 32094775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 32097456 - 32097575
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    ||||||||||||||||||||||||| | ||||| |||||| ||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32097456 ttatccaaaatagaaatctaattag-cttattatttaatttgatcactaaccaattaaggctcacaattgataaatagctaatataattattattacgat 32097554  T
Q  100 atttgcccacataatgatatt 120  Q
    |||||||||||||||||||||    
T  32097555 atttgcccacataatgatatt 32097575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 14609846 - 14609737
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| |||  |||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||    
T  14609846 tagaaatctaat-agttttattacttaatttgatcactaatcaattaaggctcacaattgataagtaactaatataattattattacgatatttgcacac 14609748  T
Q  110 ataatgatatt 120  Q
    |||||||||||    
T  14609747 ataatgatatt 14609737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 41296994 - 41296885
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | |||||||||||| ||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41296994 tagaaatctaat-agccttattacttaatttgatcactaatcaactaaggctcacaattgataaatagctaatataattattattacgatatttgcccac 41296896  T
Q  110 ataatgatatt 120  Q
    |||||||||||    
T  41296895 ataatgatatt 41296885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 20499853 - 20499747
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| |||| |||||||||||| ||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||     
T  20499853 tagaaatctaat-agtcttattacttaatttgatcactaatcaattaagactcacaattgataaatagctaatataattattattacgatatttgtccat 20499755  T
Q  110 ataatgat 117  Q
    ||||||||    
T  20499754 ataatgat 20499747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 28525847 - 28525939
Alignment:
Q  29 tattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatatt 120  Q
    |||||||||||| ||| ||||||||| |||||| ||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||    
T  28525847 tattacttaatttgatcactaatcaactaaggcccacaattgataaatagctaatataattattgttacgatattttcccacataatgatatt 28525939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 28531943 - 28532035
Alignment:
Q  29 tattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatatt 120  Q
    |||||||||||| ||| ||||||||| |||||| ||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||    
T  28531943 tattacttaatttgatcactaatcaactaaggcccacaattgataaatagctaatataattattgttacgatattttcccacataatgatatt 28532035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 119
Target Start/End: Original strand, 30384845 - 30384936
Alignment:
Q  29 tattacttaattga-taactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatat 119  Q
    |||||||||||| | | |||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||| ||||||||||||||    
T  30384845 tattacttaatttaatcactaatcaattaaggctcacaactgataaatagctaatataattattattacaatatttgtccacataatgatat 30384936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 7389992 - 7390101
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | |||||||||||| ||| ||||||||| |||| ||||||||||||||||| |||||||||||||  ||||||||||| |||||    
T  7389992 tagaaatctaat-agccttattacttaatttgatcactaatcaactaagactcacaattgataaatagctaatataattatcgttacgatattttcccac 7390090  T
Q  110 ataatgatatt 120  Q
    |||||||||||    
T  7390091 ataatgatatt 7390101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 30771978 - 30771889
Alignment:
Q  29 tattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatatt 120  Q
    |||||||||||| ||| |||||||||||||||||||||| ||||||    |||||||||||||||||||||||||||||||||||||||||||    
T  30771978 tattacttaatttgatcactaatcaattaaggctcacaactgataag---ctaatataattattattacgatatttgcccacataatgatatt 30771889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 19060214 - 19060322
Alignment:
Q  8 aaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcc 106  Q
    ||||||||||||||| || | |||||||||||| ||| |||||||||||||| |||  |||||| ||||| ||||||||||||||||   ||||||||||    
T  19060214 aaatagaaatctaataagccttattacttaatttgatcactaatcaattaagtctccaaattgacaaatagctaatataattattatggagatatttgcc 19060313  T
Q  107 cacataatg 115  Q
    |||||||||    
T  19060314 cacataatg 19060322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 22647928 - 22648014
Alignment:
Q  8 aaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattat 93  Q
    |||||||||||||||||||| |||||||||||| |||||||||| ||||||| |||  |||| |||||||| |||||||||||||||    
T  22647928 aaatagaaatctaattagtcttattacttaatttgataactaattaattaagactccaaatttataaataattaatataattattat 22648014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 19066548 - 19066655
Alignment:
Q  8 aaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcc 106  Q
    ||||||||||||||| || | | |||||||||| ||| ||||||||||||||||||   ||||| |||||| |||||||||||||||   ||||||||||    
T  19066548 aaatagaaatctaataagccttgttacttaatttgatcactaatcaattaaggctccagattgacaaataattaatataattattatggagatatttgcc 19066647  T
Q  107 cacataat 114  Q
    ||||||||    
T  19066648 cacataat 19066655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 119
Target Start/End: Original strand, 25408437 - 25408514
Alignment:
Q  39 ttgataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatat 119  Q
    ||||| ||||||||||||||||||||||||||||||||    ||||||||| | |||||||||||| ||||||||||||||    
T  25408437 ttgatcactaatcaattaaggctcacaattgataaata---tatataattacttttacgatatttgtccacataatgatat 25408514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 33753710 - 33753784
Alignment:
Q  46 ctaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatatt 120  Q
    |||||||||||| ||||  |||||||||||| ||||||||||||| || |  |||||| ||||||||||||||||    
T  33753710 ctaatcaattaaagctccaaattgataaatagctaatataattatgataataatatttacccacataatgatatt 33753784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 8706859 - 8706916
Alignment:
Q  39 ttgataactaatcaattaaggctcacaattgataaataactaatataattattattac 96  Q
    ||||| |||||||||||||| | |||| |||||||||| |||||||||||||||||||    
T  8706859 ttgatcactaatcaattaagacccacagttgataaatagctaatataattattattac 8706916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 26318721 - 26318765
Alignment:
Q  45 actaatcaattaaggctcacaattgataaataactaatataatta 89  Q
    |||||||||||||| |||| |||||||| ||||||||||||||||    
T  26318721 actaatcaattaagtctcagaattgatagataactaatataatta 26318765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 8e-48; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 13455825 - 13455705
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    ||||||||||||||||||||||||| | |||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13455825 ttatccaaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataattattattacgat 13455726  T
Q  100 atttgcccacataatgatatt 120  Q
    |||||||||||||||||||||    
T  13455725 atttgcccacataatgatatt 13455705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 13461766 - 13461646
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    ||||||||||||||||||||||||| | |||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13461766 ttatccaaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataattattattacgat 13461667  T
Q  100 atttgcccacataatgatatt 120  Q
    |||||||||||||||||||||    
T  13461666 atttgcccacataatgatatt 13461646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 35085113 - 35085233
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    ||||||||||||||||||||||||| | |||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  35085113 ttatccaaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataattattattacgat 35085212  T
Q  100 atttgcccacataatgatatt 120  Q
    |||||||||||||||||||||    
T  35085213 atttgcccacataatgatatt 35085233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 36750139 - 36750020
Alignment:
Q  2 tatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgata 100  Q
    |||||||||||||||||||||||| | |||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  36750139 tatccaaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataattattattacgata 36750040  T
Q  101 tttgcccacataatgatatt 120  Q
    ||||||||||||||||||||    
T  36750039 tttgcccacataatgatatt 36750020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 35091086 - 35091206
Alignment:
Q  1 ttatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgat 99  Q
    ||||||||||||||||||||||||| | |||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  35091086 ttatccaaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataattattattacgat 35091185  T
Q  100 atttgcccacataatgatatt 120  Q
    |||| ||||||||||||||||    
T  35091186 atttacccacataatgatatt 35091206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 28683389 - 28683499
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | |||||||||||| ||| ||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  28683389 tagaaatctaat-agccttattacttaatttgatcactaatcaactaaggcccacaattgataaataactaatataattattgttacgatatttgcccac 28683487  T
Q  110 ataatgatatta 121  Q
    ||||||||||||    
T  28683488 ataatgatatta 28683499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 30965042 - 30964933
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| |||| |||||||||||| ||| ||||||||| |||||| ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  30965042 tagaaatctaat-agtcttattacttaatttgatcactaatcaactaaggcccacaattgataaatagctaatataattattgttacgatatttgcccac 30964944  T
Q  110 ataatgatatt 120  Q
    |||||||||||    
T  30964943 ataatgatatt 30964933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 35439815 - 35439924
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | |||||||||||| ||| |||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  35439815 tagaaatctaat-agccttattacttaatttgatcactaatcaatcaaggctcacaattgataaataacgaatataattattgttacgatatttgcccac 35439913  T
Q  110 ataatgatatt 120  Q
    |||||||||||    
T  35439914 ataatgatatt 35439924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 23283955 - 23283849
Alignment:
Q  15 aatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataa 113  Q
    |||||||| || | |||||||||||| ||| |||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  23283955 aatctaataagccttattacttaatttgatcactaatcaattaagactccaaattgataaataactaatataattattattacgatatttgtccacataa 23283856  T
Q  114 tgatatt 120  Q
    |||||||    
T  23283855 tgatatt 23283849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 23343282 - 23343168
Alignment:
Q  8 aaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcc 106  Q
    ||||||||||||||| || | |||||||||||| ||| ||||||||||||||||||  ||||||||||||  ||||||||||||||||| |||||||| |    
T  23343282 aaatagaaatctaataagccttattacttaatttgatcactaatcaattaaggctccaaattgataaatagttaatataattattattatgatatttgtc 23343183  T
Q  107 cacataatgatatta 121  Q
    |||||||||||||||    
T  23343182 cacataatgatatta 23343168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 19879309 - 19879200
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | |||||||||||| ||| ||||||||| |||||||||||||| ||||||| |||||||| ||||||||||||||||| |||||    
T  19879309 tagaaatctaat-agccttattacttaatttgatcactaatcaactaaggctcacaattaataaatagctaatatagttattattacgatattttcccac 19879211  T
Q  110 ataatgatatt 120  Q
    |||||||||||    
T  19879210 ataatgatatt 19879200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 31002091 - 31001982
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | |||||||||||| ||| ||||||||| |||||| ||||||||||||||| |||||||||||||| ||| |||||||||||||    
T  31002091 tagaaatctaat-agccttattacttaatttgatcactaatcaactaaggcccacaattgataaatagctaatataattattgttatgatatttgcccac 31001993  T
Q  110 ataatgatatt 120  Q
    |||||||||||    
T  31001992 ataatgatatt 31001982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 35442277 - 35442386
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | |||||||||||| ||| |||||||||| ||||||||||||||||||||| | |||||||||||| ||||||||||| |||||    
T  35442277 tagaaatctaat-agccttattacttaatttgatcactaatcaatcaaggctcacaattgataaatagcgaatataattattgttacgatatttacccac 35442375  T
Q  110 ataatgatatt 120  Q
    |||||||||||    
T  35442376 ataatgatatt 35442386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 44717250 - 44717359
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | |||||||||||| ||| ||||||||| |||| ||||||||||||||||| |||||||||||||| ||||||||| |||||||    
T  44717250 tagaaatctaat-agccttattacttaatttgatcactaatcaactaagactcacaattgataaatagctaatataattattgttacgatatgtgcccac 44717348  T
Q  110 ataatgatatt 120  Q
    |||||||||||    
T  44717349 ataatgatatt 44717359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 13150134 - 13150243
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | |||||||||||| ||| | ||||||| ||| || ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  13150134 tagaaatctaat-agccttattacttaatttgatcaataatcaactaatgcccacaattgataaatagctaatataattattgttacgatatttgcccac 13150232  T
Q  110 ataatgatatt 120  Q
    |||||||||||    
T  13150233 ataatgatatt 13150243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 31008069 - 31007989
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattatt 91  Q
    |||||||||||| || | |||||||||||| ||| ||||||||| |||||| ||||||||||||||| ||||||||||||||    
T  31008069 tagaaatctaat-agccttattacttaatttgatcactaatcaactaaggcccacaattgataaatagctaatataattatt 31007989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 7771648 - 7771722
Alignment:
Q  29 tattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatt 102  Q
    |||||||||||| ||| | ||||||| |||| || |||||||||||||| |||||||||||||| ||||||||||    
T  7771648 tattacttaatttgatcagtaatcaactaagacttacaattgataaatagctaatataattattgttacgatatt 7771722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 38731195 - 38731147
Alignment:
Q  65 aattgataaataactaatataattattattacgatatttgcccacataa 113  Q
    ||||||||||| ||||||||||||||||| | |||||||| ||||||||    
T  38731195 aattgataaatgactaatataattattataaagatatttgaccacataa 38731147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 120
Target Start/End: Original strand, 11049012 - 11049046
Alignment:
Q  86 attattattacgatatttgcccacataatgatatt 120  Q
    ||||||||||||||||||||||||||||| |||||    
T  11049012 attattattacgatatttgcccacataataatatt 11049046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 8e-45; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 24287712 - 24287593
Alignment:
Q  2 tatccaaaatagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgata 100  Q
    |||||||||||||||||||||||| | |||||||||||| ||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  24287712 tatccaaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaatttataaatagctaatataattattattacgata 24287613  T
Q  101 tttgcccacataatgatatt 120  Q
    ||||||||||||||||||||    
T  24287612 tttgcccacataatgatatt 24287593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 10733794 - 10733903
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | |||||||||||| ||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10733794 tagaaatctaat-agccttattacttaatttgatcactaatcaactaaggctcacaattgataaatagctaatataattattattacgatatttgcccac 10733892  T
Q  110 ataatgatatt 120  Q
    |||||||||||    
T  10733893 ataatgatatt 10733903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 10947563 - 10947672
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | |||||||||||| ||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10947563 tagaaatctaat-agccttattacttaatttgatcactaatcaactaaggctcacaattgataaatagctaatataattattattacgatatttgcccac 10947661  T
Q  110 ataatgatatt 120  Q
    |||||||||||    
T  10947662 ataatgatatt 10947672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 26957248 - 26957357
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| |||| |||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  26957248 tagaaatctaat-agtcttattacttaatttgatcactaattaattaaggctcacaattgataaatagctaatataattattgttacgatatttgcccac 26957346  T
Q  110 ataatgatatt 120  Q
    |||||||||||    
T  26957347 ataatgatatt 26957357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 12 - 120
Target Start/End: Original strand, 10739782 - 10739890
Alignment:
Q  12 agaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccaca 110  Q
    ||||||||||| || | |||||||||||| ||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10739782 agaaatctaat-agccttattacttaatttgatcactaatcaactaaggctcacaattgataaatagctaatataattattattacgatatttgcccaca 10739880  T
Q  111 taatgatatt 120  Q
    ||||||||||    
T  10739881 taatgatatt 10739890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 12 - 120
Target Start/End: Original strand, 10953551 - 10953659
Alignment:
Q  12 agaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccaca 110  Q
    ||||||||||| || | |||||||||||| ||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10953551 agaaatctaat-agccttattacttaatttgatcactaatcaactaaggctcacaattgataaatagctaatataattattattacgatatttgcccaca 10953649  T
Q  111 taatgatatt 120  Q
    ||||||||||    
T  10953650 taatgatatt 10953659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 6257666 - 6257758
Alignment:
Q  29 tattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatatt 120  Q
    |||||||||||| ||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6257666 tattacttaatttgatcactaatcaactaaggctcacaattgataaatagctaatataattattattacgatatttgcccacataatgatatt 6257758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 48160674 - 48160565
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | |||||||||||| ||| ||||||||| |||||| ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  48160674 tagaaatctaat-agccttattacttaatttgatcactaatcaactaaggcccacaattgataaatagctaatataattattgttacgatatttgcccac 48160576  T
Q  110 ataatgatatt 120  Q
    |||||||||||    
T  48160575 ataatgatatt 48160565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 48166893 - 48166784
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | |||||||||||| ||| ||||||||| |||||| ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  48166893 tagaaatctaat-agccttattacttaatttgatcactaatcaactaaggcccacaattgataaatagctaatataattattgttacgatatttgcccac 48166795  T
Q  110 ataatgatatt 120  Q
    |||||||||||    
T  48166794 ataatgatatt 48166784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 39 - 120
Target Start/End: Original strand, 26972027 - 26972108
Alignment:
Q  39 ttgataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatatt 120  Q
    ||||| |||||||||||||| ||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||    
T  26972027 ttgatcactaatcaattaagactcacaattgataaatagctaatataattattgttacaatatttgcccacataatgatatt 26972108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 29 - 119
Target Start/End: Original strand, 17627236 - 17627327
Alignment:
Q  29 tattacttaattga-taactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatat 119  Q
    |||||||||||| | | ||||||||||| || |||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  17627236 tattacttaatttaatcactaatcaattcagactcacaatcgataaatagctaatataattattattacgatattttcccacataatgatat 17627327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 33461797 - 33461868
Alignment:
Q  49 atcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatatt 120  Q
    ||||| |||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| ||||||    
T  33461797 atcaactaaggctcacaattgataaatagctaatataattattgttacgataattgcccacataaagatatt 33461868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 45 - 120
Target Start/End: Complemental strand, 50168276 - 50168201
Alignment:
Q  45 actaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatatt 120  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| || || ||||| ||||    
T  50168276 actaatcaattaagactcacaattgataaatagctaatataattattattacgatattttccgacgtaatgttatt 50168201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 50426945 - 50426879
Alignment:
Q  29 tattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattatt 94  Q
    |||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  50426945 tattacttaatttgatcactaatcaattaaggctcacacttgataaataactaatataattattatt 50426879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 33458672 - 33458743
Alignment:
Q  49 atcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatatt 120  Q
    ||||| ||||||||||||||||||||||  ||||||||||||| |||||||| |||||||||||| ||||||    
T  33458672 atcaactaaggctcacaattgataaatagttaatataattattgttacgataattgcccacataaggatatt 33458743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 115
Target Start/End: Complemental strand, 49976314 - 49976213
Alignment:
Q  14 aaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacata 112  Q
    ||||||||| || | |||||||||||| ||| ||||||||||||||||||  |||| ||||||| ||||||||||||||||   |||| |||||||||||    
T  49976314 aaatctaataagccttattacttaatttgatcactaatcaattaaggctccaaattaataaatagctaatataattattatagagata-ttgcccacata 49976216  T
Q  113 atg 115  Q
    |||    
T  49976215 atg 49976213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 35177492 - 35177413
Alignment:
Q  29 tattacttaatt-gataactaatcaattaaggctc----acaattgataaataactaatataattattattacgatattt 103  Q
    |||||||||||| ||| ||||||||||||| ||||    | |||||||||||| ||||||||||||||||||||||||||    
T  35177492 tattacttaatttgatcactaatcaattaatgctcgttcataattgataaatatctaatataattattattacgatattt 35177413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 4632091 - 4631987
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| |  | |||||||||||| ||| |||||||||||||| ||   ||||||||||||||||||||||||| |||   ||||| ||| |||    
T  4632091 tagaaatctaataaaccttattacttaatttgattactaatcaattaagacttcaaattgataaataactaatataattactatagagatatatgctcac 4631992  T
Q  110 ataat 114  Q
    |||||    
T  4631991 ataat 4631987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 107
Target Start/End: Original strand, 44832076 - 44832155
Alignment:
Q  29 tattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgccc 107  Q
    |||||||||||| ||| ||||||||| ||||    | ||||||||||||||||||||||||||| |||| ||||||||||    
T  44832076 tattacttaatttgatcactaatcaactaagatctataattgataaataactaatataattattgttacaatatttgccc 44832155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 120
Target Start/End: Original strand, 532100 - 532138
Alignment:
Q  82 tataattattattacgatatttgcccacataatgatatt 120  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  532100 tataattattattacgatatttgcctacataatgatatt 532138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 119
Target Start/End: Original strand, 19686866 - 19686905
Alignment:
Q  81 atataattattattacgatatttgcccac-ataatgatat 119  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  19686866 atataattattattacgatatttgcccacaataatgatat 19686905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 19686790 - 19686854
Alignment:
Q  39 ttgataactaatcaattaaggctcacaattgataaataacta---atataattattattacgata 100  Q
    ||||| |||||||||||||| | |||||| |||||||| |||   ||||||||||||||||||||    
T  19686790 ttgatcactaatcaattaagacacacaatcgataaatagctaattatataattattattacgata 19686854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 1043 - 1152
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | |||||||||||| ||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1043 tagaaatctaat-agccttattacttaatttgatcactaatcaactaagactcacaattgataaataactaatataattattattacgatattttcccac 1141  T
Q  110 ataatgatatt 120  Q
    |||||||||||    
T  1142 ataatgatatt 1152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1114 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold1114
Description:

Target: scaffold1114; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 761 - 669
Alignment:
Q  29 tattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatatt 120  Q
    |||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  761 tattacttaatttgatcactaatcaattgaggctcacaattgataaataactaatataattattattatgatattttcccacataatgatatt 669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 5682 - 5576
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| |||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||    
T  5682 tagaaatctaat-agtcatattacttaatttgatcactaatcaattaaggctcacaattgataaataactaatataattattatagcgatatttgcctac 5584  T
Q  110 ataatgat 117  Q
    | ||||||    
T  5583 aaaatgat 5576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 13971 - 13879
Alignment:
Q  29 tattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatgatatt 120  Q
    |||||||||||| ||| |||| ||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||    
T  13971 tattacttaatttgatcactagtcaattaaggctcacgattgataaatagctaatataattattattactatattttcccacataatgatatt 13879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0440 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 1632 - 1741
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | |||||||||||| ||| ||||||||| |||||| ||||||||||||||| |||||||||||||| ||||||||||| |||||    
T  1632 tagaaatctaat-agccttattacttaatttgatcactaatcaactaaggcccacaattgataaatagctaatataattattgttacgatatttacccac 1730  T
Q  110 ataatgatatt 120  Q
    ||||| |||||    
T  1731 ataataatatt 1741  T

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Target: scaffold0012 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 173334 - 173443
Alignment:
Q  11 tagaaatctaattagtcctattacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccac 109  Q
    |||||||||||| || | |||||||||||| ||| ||||||||| |||| | ||||||||||||||  ||||||||||||||||||||||||||||||||    
T  173334 tagaaatctaat-agccttattacttaatttgatcactaatcaactaagacccacaattgataaatcgctaatataattattattacgatatttgcccac 173432  T
Q  110 ataatgatatt 120  Q
    ||||| |||||    
T  173433 ataataatatt 173443  T

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Target: scaffold0449 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 69 - 119
Target Start/End: Original strand, 1281 - 1331
Alignment:
Q  69 gataaataactaatataattattattacgatatttgcccacataatgatat 119  Q
    |||||||| ||||||||||||||||||||||||||| ||| ||||||||||    
T  1281 gataaatagctaatataattattattacgatatttgtccatataatgatat 1331  T

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Target: scaffold0085 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 38124 - 38038
Alignment:
Q  31 ttacttaatt-gataactaatcaattaaggctcacaattgataaataactaatataattattattacgatatttgcccacataatga 116  Q
    |||||||||| ||| |||| |||||||||| |   ||||||||||||||||||| ||||||||||| ||| || || ||||||||||    
T  38124 ttacttaatttgatcactattcaattaaggtttcaaattgataaataactaataaaattattattatgattttcgctcacataatga 38038  T

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