View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1755_high_26 (Length: 225)

Name: NF1755_high_26
Description: NF1755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1755_high_26
NF1755_high_26
[»] chr5 (79 HSPs)
chr5 (25-159)||(28388520-28388658)
chr5 (19-159)||(25889928-25890072)
chr5 (19-91)||(34122530-34122602)
chr5 (1-63)||(27662244-27662306)
chr5 (25-91)||(28387275-28387341)
chr5 (25-91)||(34123936-34124002)
chr5 (18-91)||(25897073-25897146)
chr5 (19-91)||(7017518-7017590)
chr5 (19-91)||(41798824-41798896)
chr5 (16-75)||(7757347-7757406)
chr5 (12-63)||(8577008-8577059)
chr5 (16-63)||(28238173-28238220)
chr5 (25-74)||(19037471-19037520)
chr5 (30-91)||(39743154-39743215)
chr5 (109-161)||(1039835-1039887)
chr5 (44-91)||(13568095-13568142)
chr5 (20-63)||(13837758-13837801)
chr5 (43-86)||(27863440-27863483)
chr5 (25-91)||(542791-542857)
chr5 (19-61)||(27659976-27660018)
chr5 (44-90)||(37820874-37820920)
chr5 (25-91)||(38968101-38968167)
chr5 (18-91)||(1035190-1035263)
chr5 (18-63)||(14280894-14280939)
chr5 (25-62)||(18307289-18307326)
chr5 (19-88)||(25877631-25877699)
chr5 (26-63)||(38855713-38855750)
chr5 (25-85)||(18538336-18538396)
chr5 (26-70)||(35926389-35926433)
chr5 (28-91)||(1398610-1398673)
chr5 (44-91)||(7021878-7021925)
chr5 (28-91)||(8702202-8702265)
chr5 (28-63)||(11346041-11346076)
chr5 (16-63)||(19041109-19041156)
chr5 (16-63)||(28876677-28876724)
chr5 (19-58)||(31787559-31787598)
chr5 (16-63)||(37814616-37814663)
chr5 (28-63)||(41201762-41201797)
chr5 (29-75)||(8052-8098)
chr5 (25-63)||(3603149-3603187)
chr5 (25-63)||(4204212-4204250)
chr5 (25-63)||(19035272-19035310)
chr5 (25-63)||(25497545-25497583)
chr5 (24-62)||(30705167-30705205)
chr5 (29-91)||(34682263-34682325)
chr5 (26-63)||(5810-5847)
chr5 (18-63)||(11028998-11029043)
chr5 (25-74)||(30708926-30708975)
chr5 (19-60)||(33995143-33995184)
chr5 (19-75)||(7762239-7762295)
chr5 (19-63)||(17965883-17965927)
chr5 (27-91)||(17966889-17966953)
chr5 (28-68)||(30354400-30354440)
chr5 (19-63)||(30708868-30708912)
chr5 (27-63)||(36503106-36503142)
chr5 (44-91)||(27867840-27867887)
chr5 (110-161)||(42912967-42913018)
chr5 (34-64)||(4203912-4203942)
chr5 (25-63)||(13838425-13838463)
chr5 (25-63)||(20200149-20200187)
chr5 (116-162)||(30705068-30705114)
chr5 (25-63)||(38408471-38408509)
chr5 (45-90)||(1396293-1396338)
chr5 (19-64)||(7021572-7021617)
chr5 (25-58)||(28880361-28880394)
chr5 (25-62)||(33993315-33993352)
chr5 (18-63)||(39742609-39742654)
chr5 (18-63)||(42098337-42098382)
chr5 (26-63)||(42539375-42539412)
chr5 (16-56)||(8118-8158)
chr5 (19-63)||(511073-511117)
chr5 (19-63)||(540960-541004)
chr5 (19-63)||(13567789-13567833)
chr5 (25-85)||(25499888-25499948)
chr5 (19-63)||(25983403-25983447)
chr5 (19-63)||(27532612-27532656)
chr5 (116-160)||(27673748-27673792)
chr5 (19-63)||(29430573-29430617)
chr5 (27-91)||(41799770-41799834)
[»] scaffold0116 (2 HSPs)
scaffold0116 (19-160)||(15950-16095)
scaffold0116 (45-91)||(11307-11353)
[»] chr3 (116 HSPs)
chr3 (19-159)||(4002500-4002643)
chr3 (18-161)||(14398467-14398614)
chr3 (19-91)||(2743404-2743476)
chr3 (19-164)||(36812765-36812915)
chr3 (43-159)||(14402989-14403109)
chr3 (25-91)||(20918012-20918078)
chr3 (25-91)||(20926974-20927040)
chr3 (19-91)||(24700727-24700799)
chr3 (25-91)||(41803004-41803070)
chr3 (25-91)||(48250870-48250936)
chr3 (29-91)||(49219796-49219858)
chr3 (1-58)||(1835237-1835294)
chr3 (1-58)||(41844267-41844324)
chr3 (19-91)||(9429844-9429916)
chr3 (19-91)||(13747714-13747785)
chr3 (19-91)||(19341589-19341661)
chr3 (19-91)||(34691631-34691703)
chr3 (27-91)||(46989553-46989617)
chr3 (26-90)||(48888747-48888811)
chr3 (16-84)||(49268837-49268905)
chr3 (16-63)||(46697745-46697792)
chr3 (20-74)||(34049103-34049157)
chr3 (25-91)||(42756165-42756231)
chr3 (17-63)||(50477214-50477260)
chr3 (20-74)||(54389818-54389872)
chr3 (25-74)||(2647700-2647749)
chr3 (18-63)||(30943223-30943268)
chr3 (18-63)||(35743576-35743621)
chr3 (18-91)||(36817515-36817588)
chr3 (25-74)||(43476215-43476264)
chr3 (43-91)||(13743299-13743347)
chr3 (27-91)||(30256006-30256070)
chr3 (43-91)||(41137724-41137772)
chr3 (19-63)||(41844359-41844403)
chr3 (19-75)||(43478825-43478881)
chr3 (19-75)||(48246434-48246490)
chr3 (16-63)||(600536-600583)
chr3 (24-91)||(11380447-11380514)
chr3 (16-63)||(42165197-42165244)
chr3 (16-63)||(49144448-49144495)
chr3 (28-75)||(55385159-55385206)
chr3 (25-75)||(4004804-4004854)
chr3 (13-63)||(8475860-8475910)
chr3 (25-63)||(19440290-19440328)
chr3 (25-91)||(29918342-29918408)
chr3 (25-91)||(29967495-29967561)
chr3 (25-91)||(34694435-34694501)
chr3 (25-63)||(41579725-41579763)
chr3 (24-62)||(42760209-42760247)
chr3 (20-74)||(49140843-49140897)
chr3 (43-89)||(50957685-50957731)
chr3 (26-63)||(3501897-3501934)
chr3 (18-63)||(3953209-3953254)
chr3 (19-88)||(6489338-6489407)
chr3 (18-63)||(6745320-6745365)
chr3 (18-63)||(8156542-8156587)
chr3 (25-62)||(44227147-44227184)
chr3 (14-62)||(4015119-4015167)
chr3 (19-63)||(34712754-34712798)
chr3 (20-63)||(1293411-1293454)
chr3 (16-63)||(2967917-2967964)
chr3 (28-91)||(7247864-7247927)
chr3 (24-63)||(41612398-41612437)
chr3 (109-160)||(42166498-42166549)
chr3 (27-62)||(48566403-48566438)
chr3 (28-91)||(49196453-49196516)
chr3 (16-58)||(2271395-2271437)
chr3 (25-91)||(2432944-2433010)
chr3 (25-63)||(2950400-2950438)
chr3 (16-58)||(4004885-4004927)
chr3 (109-159)||(4331908-4331958)
chr3 (25-63)||(13896877-13896915)
chr3 (19-73)||(16484451-16484505)
chr3 (25-91)||(28611101-28611167)
chr3 (25-63)||(36134357-36134395)
chr3 (25-63)||(46406592-46406630)
chr3 (25-63)||(49138648-49138686)
chr3 (16-62)||(52387833-52387879)
chr3 (25-63)||(54392029-54392067)
chr3 (25-91)||(55207664-55207730)
chr3 (18-63)||(42166404-42166449)
chr3 (20-85)||(49609395-49609460)
chr3 (25-62)||(51402399-51402436)
chr3 (19-63)||(2647763-2647807)
chr3 (16-60)||(36134267-36134311)
chr3 (19-63)||(41844183-41844227)
chr3 (31-63)||(46344971-46345003)
chr3 (16-63)||(4008315-4008362)
chr3 (20-63)||(6143705-6143748)
chr3 (25-60)||(29929463-29929498)
chr3 (25-60)||(29978617-29978652)
chr3 (109-160)||(42165097-42165148)
chr3 (19-62)||(48566377-48566420)
chr3 (24-63)||(50481387-50481426)
chr3 (25-63)||(1294078-1294116)
chr3 (25-55)||(2267098-2267128)
chr3 (25-75)||(2271314-2271364)
chr3 (109-159)||(4015217-4015267)
chr3 (25-63)||(14043899-14043937)
chr3 (17-63)||(17561808-17561854)
chr3 (49-91)||(23443131-23443173)
chr3 (29-63)||(34051318-34051352)
chr3 (25-63)||(50604421-50604459)
chr3 (45-83)||(50953316-50953354)
chr3 (25-59)||(50998655-50998689)
chr3 (25-63)||(52570567-52570605)
chr3 (19-60)||(10492868-10492909)
chr3 (34-63)||(46992934-46992963)
chr3 (31-63)||(1835334-1835366)
chr3 (19-63)||(2645490-2645534)
chr3 (19-63)||(3493623-3493667)
chr3 (19-63)||(3497317-3497361)
chr3 (43-91)||(7841127-7841175)
chr3 (19-63)||(27738639-27738683)
chr3 (27-63)||(34712267-34712303)
chr3 (27-63)||(44523456-44523492)
[»] chr4 (98 HSPs)
chr4 (25-91)||(9890000-9890066)
chr4 (19-88)||(15995731-15995800)
chr4 (19-88)||(19069196-19069265)
chr4 (18-91)||(15999793-15999866)
chr4 (25-91)||(41023392-41023458)
chr4 (25-82)||(19073656-19073713)
chr4 (1-58)||(37563183-37563240)
chr4 (1-58)||(39773510-39773567)
chr4 (1-58)||(54633918-54633975)
chr4 (25-89)||(55407794-55407858)
chr4 (16-91)||(8109397-8109472)
chr4 (16-63)||(21022880-21022927)
chr4 (16-63)||(30726733-30726780)
chr4 (16-63)||(31425310-31425357)
chr4 (16-63)||(40358272-40358319)
chr4 (16-75)||(51492093-51492152)
chr4 (25-91)||(1041941-1042007)
chr4 (25-75)||(16983544-16983594)
chr4 (25-70)||(958595-958640)
chr4 (25-74)||(6178111-6178160)
chr4 (2-63)||(21018068-21018129)
chr4 (25-74)||(49094107-49094156)
chr4 (19-75)||(16984156-16984212)
chr4 (18-62)||(26932619-26932663)
chr4 (19-63)||(37563275-37563319)
chr4 (19-63)||(39773438-39773482)
chr4 (19-63)||(54634010-54634054)
chr4 (16-63)||(1089576-1089623)
chr4 (44-91)||(3403853-3403900)
chr4 (16-63)||(49169089-49169136)
chr4 (25-63)||(11494577-11494615)
chr4 (25-63)||(39590569-39590607)
chr4 (16-81)||(37022053-37022118)
chr4 (25-74)||(41795357-41795406)
chr4 (25-74)||(55793943-55793992)
chr4 (25-74)||(56138275-56138324)
chr4 (27-63)||(20208544-20208580)
chr4 (25-64)||(67625-67664)
chr4 (109-160)||(28235649-28235700)
chr4 (16-63)||(37015932-37015979)
chr4 (109-160)||(37880597-37880648)
chr4 (16-63)||(41800929-41800976)
chr4 (24-63)||(44680078-44680117)
chr4 (25-63)||(955826-955864)
chr4 (25-63)||(28234450-28234488)
chr4 (25-63)||(29700303-29700341)
chr4 (12-58)||(30723213-30723259)
chr4 (25-63)||(33383839-33383877)
chr4 (25-63)||(34151648-34151686)
chr4 (18-60)||(37563102-37563144)
chr4 (109-159)||(37880655-37880705)
chr4 (25-63)||(37959721-37959759)
chr4 (25-63)||(40354639-40354677)
chr4 (25-63)||(41793398-41793436)
chr4 (25-91)||(48256569-48256635)
chr4 (25-63)||(49563874-49563912)
chr4 (45-91)||(50274766-50274812)
chr4 (29-63)||(52529247-52529281)
chr4 (25-74)||(21018005-21018054)
chr4 (30-91)||(24414841-24414902)
chr4 (26-63)||(26792246-26792283)
chr4 (109-158)||(56565693-56565742)
chr4 (14-63)||(56565791-56565840)
chr4 (27-63)||(9013873-9013909)
chr4 (19-63)||(21015773-21015817)
chr4 (43-91)||(37395210-37395258)
chr4 (19-63)||(38460460-38460504)
chr4 (19-63)||(44051087-44051131)
chr4 (27-62)||(72510-72545)
chr4 (109-160)||(3186152-3186203)
chr4 (27-62)||(8111420-8111455)
chr4 (45-92)||(9491280-9491327)
chr4 (19-62)||(10423401-10423444)
chr4 (24-63)||(31421736-31421775)
chr4 (48-91)||(37394254-37394297)
chr4 (25-60)||(49096319-49096354)
chr4 (28-63)||(49572904-49572939)
chr4 (25-63)||(4783680-4783718)
chr4 (25-63)||(6175911-6175949)
chr4 (25-63)||(11084008-11084046)
chr4 (25-63)||(21470937-21470975)
chr4 (25-63)||(33409557-33409595)
chr4 (25-63)||(33410230-33410268)
chr4 (25-63)||(41933623-41933661)
chr4 (25-63)||(44561331-44561369)
chr4 (109-159)||(44794994-44795044)
chr4 (109-159)||(56566639-56566689)
chr4 (34-63)||(3408250-3408279)
chr4 (109-158)||(16473768-16473817)
chr4 (27-60)||(30704051-30704084)
chr4 (28-85)||(38464770-38464826)
chr4 (26-75)||(49889705-49889753)
chr4 (19-63)||(23221665-23221709)
chr4 (25-53)||(31242786-31242814)
chr4 (19-63)||(34503743-34503787)
chr4 (19-63)||(36480535-36480579)
chr4 (43-91)||(50278817-50278865)
chr4 (31-63)||(54633846-54633878)
[»] chr1 (86 HSPs)
chr1 (25-91)||(52802136-52802202)
chr1 (18-91)||(6562155-6562228)
chr1 (19-91)||(44470006-44470078)
chr1 (19-91)||(15047288-15047360)
chr1 (20-91)||(9711647-9711718)
chr1 (25-91)||(6557921-6557987)
chr1 (19-88)||(23359344-23359413)
chr1 (19-91)||(48751405-48751477)
chr1 (25-91)||(44336255-44336321)
chr1 (27-91)||(23276111-23276175)
chr1 (16-63)||(3728769-3728816)
chr1 (16-63)||(8548661-8548708)
chr1 (28-91)||(11183192-11183255)
chr1 (25-84)||(51289961-51290020)
chr1 (25-91)||(26633533-26633599)
chr1 (18-63)||(3944008-3944053)
chr1 (18-63)||(3993837-3993882)
chr1 (25-74)||(13636123-13636172)
chr1 (19-75)||(19161914-19161970)
chr1 (16-63)||(15051340-15051387)
chr1 (16-63)||(26879287-26879334)
chr1 (16-63)||(29622416-29622463)
chr1 (15-62)||(31783706-31783753)
chr1 (44-91)||(41453844-41453891)
chr1 (28-91)||(41804037-41804100)
chr1 (28-91)||(49927517-49927580)
chr1 (25-91)||(22345267-22345332)
chr1 (25-63)||(36072403-36072441)
chr1 (19-85)||(38689944-38690009)
chr1 (25-91)||(46141788-46141854)
chr1 (25-86)||(8460098-8460158)
chr1 (25-62)||(13633904-13633941)
chr1 (25-74)||(19159646-19159695)
chr1 (18-63)||(20353929-20353974)
chr1 (18-63)||(38771663-38771708)
chr1 (19-75)||(9710600-9710656)
chr1 (44-92)||(29356685-29356733)
chr1 (43-91)||(30910022-30910070)
chr1 (27-63)||(38119614-38119650)
chr1 (19-75)||(51271586-51271642)
chr1 (16-75)||(2425677-2425736)
chr1 (44-91)||(20349463-20349510)
chr1 (16-63)||(22524160-22524207)
chr1 (25-63)||(471097-471135)
chr1 (25-91)||(18975121-18975187)
chr1 (25-63)||(19054251-19054289)
chr1 (43-85)||(29352271-29352313)
chr1 (19-69)||(29425331-29425381)
chr1 (25-91)||(35258873-35258939)
chr1 (19-73)||(44598901-44598955)
chr1 (25-91)||(46973210-46973275)
chr1 (1-58)||(19159557-19159614)
chr1 (25-86)||(36076559-36076620)
chr1 (18-63)||(50117840-50117885)
chr1 (19-63)||(1656084-1656128)
chr1 (19-63)||(3941145-3941189)
chr1 (27-91)||(19499115-19499179)
chr1 (19-83)||(19521623-19521687)
chr1 (19-63)||(19928806-19928850)
chr1 (43-91)||(22346036-22346083)
chr1 (19-63)||(29424414-29424458)
chr1 (27-63)||(38127494-38127530)
chr1 (19-63)||(46217313-46217357)
chr1 (25-60)||(7981140-7981175)
chr1 (48-91)||(30905777-30905820)
chr1 (19-62)||(45943721-45943764)
chr1 (25-84)||(50113320-50113379)
chr1 (25-63)||(16270026-16270064)
chr1 (25-63)||(21141056-21141094)
chr1 (19-65)||(26606830-26606876)
chr1 (25-63)||(29438021-29438059)
chr1 (109-159)||(31779963-31780013)
chr1 (25-91)||(49924862-49924928)
chr1 (109-158)||(98011-98060)
chr1 (27-64)||(45829133-45829170)
chr1 (17-62)||(45977665-45977710)
chr1 (19-60)||(46043543-46043584)
chr1 (19-85)||(50617215-50617283)
chr1 (27-63)||(11197430-11197466)
chr1 (18-58)||(22528611-22528651)
chr1 (43-75)||(29765548-29765580)
chr1 (19-63)||(31945856-31945900)
chr1 (19-63)||(46216432-46216476)
chr1 (19-75)||(46886383-46886438)
chr1 (19-63)||(47652728-47652772)
chr1 (43-91)||(52805552-52805600)
[»] scaffold0341 (1 HSPs)
scaffold0341 (18-91)||(17345-17418)
[»] chr8 (79 HSPs)
chr8 (19-91)||(35962313-35962385)
chr8 (18-160)||(43262358-43262500)
chr8 (25-91)||(1114749-1114815)
chr8 (43-159)||(41743824-41743944)
chr8 (1-58)||(184455-184512)
chr8 (2-58)||(22014364-22014420)
chr8 (19-75)||(22550860-22550916)
chr8 (43-156)||(20549251-20549368)
chr8 (16-63)||(26663025-26663072)
chr8 (16-75)||(39601726-39601785)
chr8 (109-159)||(39408-39458)
chr8 (25-91)||(2146958-2147023)
chr8 (25-91)||(26451486-26451552)
chr8 (25-91)||(42602466-42602532)
chr8 (18-63)||(8419438-8419483)
chr8 (18-63)||(32375685-32375730)
chr8 (1-58)||(36677831-36677888)
chr8 (26-91)||(38872932-38872997)
chr8 (19-63)||(184547-184591)
chr8 (19-63)||(41016448-41016492)
chr8 (29-88)||(44052231-44052290)
chr8 (25-91)||(18205792-18205858)
chr8 (16-74)||(34366934-34366992)
chr8 (25-63)||(40077251-40077289)
chr8 (18-63)||(7344551-7344596)
chr8 (18-63)||(17924277-17924322)
chr8 (18-63)||(22014280-22014325)
chr8 (26-63)||(36677931-36677968)
chr8 (46-91)||(45454412-45454457)
chr8 (19-63)||(15030918-15030962)
chr8 (19-91)||(21406273-21406345)
chr8 (19-91)||(21800765-21800837)
chr8 (112-160)||(23923928-23923976)
chr8 (19-63)||(45066356-45066400)
chr8 (25-68)||(22577694-22577737)
chr8 (28-91)||(35966753-35966816)
chr8 (43-85)||(39495-39537)
chr8 (25-63)||(483850-483888)
chr8 (25-63)||(18438668-18438706)
chr8 (25-63)||(22519563-22519601)
chr8 (16-62)||(23018720-23018766)
chr8 (109-147)||(31960105-31960143)
chr8 (25-63)||(32383206-32383244)
chr8 (25-63)||(32437161-32437199)
chr8 (25-91)||(34823017-34823083)
chr8 (29-63)||(41855402-41855436)
chr8 (109-159)||(45409806-45409856)
chr8 (38-91)||(39751080-39751132)
chr8 (26-75)||(39939217-39939266)
chr8 (18-58)||(184376-184416)
chr8 (43-91)||(1116207-1116255)
chr8 (33-89)||(7168096-7168152)
chr8 (109-161)||(28694507-28694559)
chr8 (16-63)||(1056193-1056240)
chr8 (25-60)||(15033148-15033183)
chr8 (24-63)||(26659484-26659523)
chr8 (29-88)||(28646252-28646311)
chr8 (29-88)||(28650836-28650895)
chr8 (20-63)||(34892805-34892848)
chr8 (16-63)||(41250064-41250111)
chr8 (27-61)||(546424-546458)
chr8 (18-63)||(36677746-36677792)
chr8 (25-63)||(40039160-40039198)
chr8 (25-63)||(40039685-40039723)
chr8 (25-63)||(40740940-40740978)
chr8 (25-63)||(41274626-41274664)
chr8 (25-63)||(42605235-42605273)
chr8 (27-64)||(4866467-4866504)
chr8 (25-62)||(18441442-18441479)
chr8 (53-98)||(41238872-41238917)
chr8 (27-63)||(486054-486090)
chr8 (19-63)||(914751-914795)
chr8 (19-63)||(2335143-2335187)
chr8 (19-63)||(7340101-7340145)
chr8 (20-60)||(13782272-13782312)
chr8 (19-63)||(20547111-20547155)
chr8 (19-63)||(21835174-21835218)
chr8 (115-159)||(34366846-34366890)
chr8 (19-55)||(42481603-42481639)
[»] scaffold0201 (1 HSPs)
scaffold0201 (19-160)||(22336-22481)
[»] chr6 (45 HSPs)
chr6 (16-91)||(28362723-28362798)
chr6 (20-91)||(31146379-31146450)
chr6 (16-91)||(31768759-31768834)
chr6 (27-91)||(2051035-2051098)
chr6 (19-91)||(13388703-13388775)
chr6 (25-74)||(6204850-6204899)
chr6 (25-74)||(11691817-11691866)
chr6 (25-74)||(22305131-22305180)
chr6 (1-58)||(26712161-26712218)
chr6 (18-75)||(29076317-29076374)
chr6 (18-75)||(29109850-29109907)
chr6 (18-75)||(29111290-29111347)
chr6 (26-91)||(32643523-32643588)
chr6 (19-63)||(13382663-13382707)
chr6 (19-63)||(26712082-26712126)
chr6 (19-63)||(28249919-28249963)
chr6 (16-63)||(11840242-11840289)
chr6 (16-63)||(18351635-18351682)
chr6 (16-63)||(27616749-27616796)
chr6 (25-91)||(18606051-18606116)
chr6 (25-91)||(23958896-23958962)
chr6 (14-63)||(26351086-26351135)
chr6 (19-80)||(31771736-31771797)
chr6 (44-91)||(18347047-18347094)
chr6 (28-63)||(24721962-24721997)
chr6 (25-63)||(6207061-6207099)
chr6 (25-63)||(11694028-11694066)
chr6 (29-63)||(26712228-26712262)
chr6 (30-91)||(7361197-7361258)
chr6 (18-91)||(8193203-8193276)
chr6 (31-64)||(24885132-24885165)
chr6 (19-63)||(9048109-9048153)
chr6 (19-75)||(14012370-14012426)
chr6 (19-63)||(17597519-17597563)
chr6 (24-63)||(3501181-3501220)
chr6 (20-63)||(9049080-9049123)
chr6 (109-159)||(3501086-3501136)
chr6 (25-63)||(13404633-13404671)
chr6 (25-75)||(29097829-29097879)
chr6 (19-60)||(14011754-14011795)
chr6 (20-61)||(15546385-15546426)
chr6 (28-65)||(24088790-24088827)
chr6 (29-70)||(31516149-31516190)
chr6 (25-62)||(35096673-35096710)
chr6 (19-63)||(32223508-32223552)
[»] chr7 (73 HSPs)
chr7 (25-88)||(42499418-42499481)
chr7 (16-84)||(34738377-34738445)
chr7 (16-63)||(35606823-35606870)
chr7 (16-91)||(47776338-47776413)
chr7 (20-74)||(9367720-9367774)
chr7 (1-63)||(10098015-10098077)
chr7 (25-91)||(37340308-37340374)
chr7 (18-63)||(45767855-45767900)
chr7 (19-63)||(15070389-15070433)
chr7 (19-63)||(17840885-17840929)
chr7 (19-63)||(18105407-18105451)
chr7 (44-91)||(618745-618792)
chr7 (28-91)||(9494810-9494873)
chr7 (16-63)||(15074220-15074267)
chr7 (16-63)||(17834521-17834568)
chr7 (16-63)||(41884118-41884165)
chr7 (25-63)||(30355240-30355278)
chr7 (110-159)||(17834422-17834471)
chr7 (19-88)||(19044303-19044371)
chr7 (19-88)||(20710265-20710333)
chr7 (18-63)||(30791002-30791047)
chr7 (25-62)||(47060961-47060998)
chr7 (28-162)||(29592474-29592612)
chr7 (25-84)||(40587674-40587733)
chr7 (25-63)||(9365713-9365751)
chr7 (25-63)||(10098400-10098438)
chr7 (45-91)||(29593349-29593395)
chr7 (19-85)||(34742390-34742456)
chr7 (25-63)||(42682028-42682066)
chr7 (18-63)||(20564107-20564152)
chr7 (25-89)||(28980173-28980238)
chr7 (25-62)||(41047812-41047849)
chr7 (19-63)||(10098112-10098156)
chr7 (27-63)||(16674802-16674838)
chr7 (27-63)||(17649170-17649206)
chr7 (31-63)||(41049196-41049228)
chr7 (16-63)||(603813-603860)
chr7 (24-63)||(5541547-5541586)
chr7 (28-63)||(7975613-7975648)
chr7 (32-63)||(10097950-10097981)
chr7 (24-63)||(17465717-17465756)
chr7 (24-63)||(17587458-17587497)
chr7 (16-63)||(42508019-42508066)
chr7 (43-89)||(5537880-5537926)
chr7 (17-63)||(9491457-9491503)
chr7 (25-75)||(17838672-17838722)
chr7 (45-91)||(27453615-27453661)
chr7 (115-161)||(36185651-36185697)
chr7 (25-63)||(36781450-36781488)
chr7 (25-63)||(38555414-38555452)
chr7 (25-63)||(42795114-42795152)
chr7 (19-73)||(48407282-48407336)
chr7 (18-63)||(20353924-20353969)
chr7 (30-63)||(34623386-34623419)
chr7 (43-88)||(36186492-36186536)
chr7 (18-63)||(38265479-38265524)
chr7 (26-91)||(48314679-48314744)
chr7 (19-63)||(618438-618482)
chr7 (27-63)||(11629764-11629800)
chr7 (20-60)||(14102344-14102384)
chr7 (20-60)||(14412361-14412401)
chr7 (19-63)||(15059946-15059990)
chr7 (19-55)||(16636203-16636239)
chr7 (17-57)||(16681030-16681070)
chr7 (19-55)||(17459399-17459435)
chr7 (19-55)||(17593779-17593815)
chr7 (17-57)||(17655266-17655306)
chr7 (25-65)||(19072469-19072509)
chr7 (27-63)||(29112407-29112443)
chr7 (47-91)||(34139903-34139947)
chr7 (27-63)||(37345107-37345143)
chr7 (35-63)||(40140773-40140801)
chr7 (35-63)||(45763721-45763749)
[»] chr2 (85 HSPs)
chr2 (18-91)||(27276368-27276441)
chr2 (19-91)||(3795343-3795415)
chr2 (19-91)||(25184825-25184896)
chr2 (19-159)||(24754019-24754170)
chr2 (19-91)||(41183219-41183290)
chr2 (16-64)||(43536135-43536183)
chr2 (36-91)||(1149478-1149533)
chr2 (16-75)||(7189943-7190002)
chr2 (16-63)||(28468675-28468722)
chr2 (25-91)||(19187224-19187290)
chr2 (1-63)||(28472060-28472122)
chr2 (20-74)||(30273146-30273200)
chr2 (20-74)||(43982222-43982276)
chr2 (29-91)||(45475446-45475508)
chr2 (18-75)||(3943186-3943243)
chr2 (25-74)||(17424155-17424204)
chr2 (43-91)||(1096601-1096649)
chr2 (18-62)||(5351726-5351770)
chr2 (19-63)||(22003396-22003440)
chr2 (31-91)||(34638147-34638206)
chr2 (28-91)||(2917689-2917752)
chr2 (19-74)||(23346803-23346858)
chr2 (31-86)||(25964822-25964877)
chr2 (16-91)||(32956335-32956410)
chr2 (44-91)||(38945768-38945815)
chr2 (45-91)||(3803564-3803610)
chr2 (16-62)||(30493394-30493440)
chr2 (25-91)||(34921760-34921826)
chr2 (25-91)||(41008929-41008994)
chr2 (18-63)||(18000266-18000311)
chr2 (26-63)||(28477069-28477106)
chr2 (19-80)||(29397927-29397988)
chr2 (25-74)||(41500235-41500284)
chr2 (18-63)||(44100792-44100837)
chr2 (19-63)||(2983434-2983478)
chr2 (47-91)||(20951069-20951113)
chr2 (19-75)||(23347323-23347379)
chr2 (19-91)||(41004535-41004606)
chr2 (16-63)||(7267436-7267483)
chr2 (16-63)||(17420602-17420649)
chr2 (16-63)||(39947633-39947680)
chr2 (25-63)||(3935897-3935935)
chr2 (20-74)||(3937848-3937902)
chr2 (25-91)||(34639315-34639381)
chr2 (25-91)||(35493342-35493408)
chr2 (29-91)||(41497478-41497540)
chr2 (25-63)||(42499820-42499858)
chr2 (25-91)||(43491115-43491181)
chr2 (19-85)||(43943701-43943767)
chr2 (25-63)||(43984302-43984340)
chr2 (18-63)||(7263051-7263096)
chr2 (29-62)||(35490741-35490774)
chr2 (18-63)||(39798477-39798522)
chr2 (30-63)||(41564498-41564531)
chr2 (27-91)||(82265-82328)
chr2 (19-63)||(14456536-14456580)
chr2 (19-91)||(24601645-24601717)
chr2 (19-91)||(24612397-24612469)
chr2 (28-84)||(30271087-30271143)
chr2 (19-91)||(35490686-35490758)
chr2 (16-88)||(45137425-45137497)
chr2 (44-91)||(1101072-1101119)
chr2 (27-62)||(6637567-6637602)
chr2 (25-88)||(23409502-23409565)
chr2 (20-63)||(33222650-33222693)
chr2 (28-91)||(39393043-39393106)
chr2 (25-91)||(435349-435414)
chr2 (25-63)||(12908430-12908468)
chr2 (25-63)||(17426366-17426404)
chr2 (25-63)||(26543990-26544028)
chr2 (20-70)||(28138607-28138657)
chr2 (109-159)||(28419342-28419392)
chr2 (25-63)||(40221131-40221169)
chr2 (25-63)||(41565352-41565390)
chr2 (25-62)||(2648152-2648189)
chr2 (110-159)||(7184990-7185039)
chr2 (25-62)||(10365793-10365830)
chr2 (110-159)||(41273337-41273386)
chr2 (19-63)||(213447-213491)
chr2 (19-63)||(9660050-9660094)
chr2 (19-75)||(10424861-10424917)
chr2 (19-55)||(15835172-15835208)
chr2 (19-63)||(18003267-18003311)
chr2 (115-159)||(39377635-39377679)
chr2 (19-91)||(42177209-42177281)
[»] scaffold0494 (5 HSPs)
scaffold0494 (19-91)||(837-909)
scaffold0494 (18-62)||(892-936)
scaffold0494 (19-63)||(5365-5409)
scaffold0494 (34-63)||(1200-1229)
scaffold0494 (24-64)||(11456-11496)
[»] scaffold0513 (1 HSPs)
scaffold0513 (26-91)||(8205-8270)
[»] scaffold0361 (1 HSPs)
scaffold0361 (18-91)||(4394-4467)
[»] scaffold0794 (1 HSPs)
scaffold0794 (19-91)||(5278-5349)
[»] scaffold0744 (2 HSPs)
scaffold0744 (18-63)||(417-462)
scaffold0744 (15-55)||(79-119)
[»] scaffold0340 (2 HSPs)
scaffold0340 (109-161)||(19161-19213)
scaffold0340 (20-91)||(1177-1247)
[»] scaffold0038 (1 HSPs)
scaffold0038 (19-63)||(50081-50125)
[»] scaffold0012 (1 HSPs)
scaffold0012 (19-87)||(232827-232895)
[»] scaffold0101 (3 HSPs)
scaffold0101 (16-63)||(41014-41061)
scaffold0101 (25-74)||(36535-36584)
scaffold0101 (18-58)||(36616-36656)
[»] scaffold0199 (2 HSPs)
scaffold0199 (25-75)||(12389-12439)
scaffold0199 (25-63)||(10686-10724)
[»] scaffold0011 (4 HSPs)
scaffold0011 (27-64)||(235932-235969)
scaffold0011 (109-159)||(235867-235917)
scaffold0011 (16-62)||(236226-236272)
scaffold0011 (14-63)||(236250-236299)
[»] scaffold0293 (1 HSPs)
scaffold0293 (19-63)||(717-761)
[»] scaffold0219 (1 HSPs)
scaffold0219 (19-91)||(20107-20179)
[»] scaffold0634 (1 HSPs)
scaffold0634 (16-63)||(7452-7499)
[»] scaffold0260 (1 HSPs)
scaffold0260 (44-91)||(11786-11833)
[»] scaffold0184 (1 HSPs)
scaffold0184 (29-91)||(18037-18099)
[»] scaffold0180 (1 HSPs)
scaffold0180 (25-63)||(15623-15661)
[»] scaffold0078 (1 HSPs)
scaffold0078 (29-91)||(54745-54807)
[»] scaffold0014 (1 HSPs)
scaffold0014 (25-63)||(84614-84652)
[»] scaffold0618 (1 HSPs)
scaffold0618 (31-63)||(3919-3951)
[»] scaffold1379 (1 HSPs)
scaffold1379 (20-91)||(430-501)
[»] scaffold0504 (1 HSPs)
scaffold0504 (14-60)||(12419-12465)
[»] scaffold0360 (1 HSPs)
scaffold0360 (25-58)||(7305-7338)
[»] scaffold1500 (1 HSPs)
scaffold1500 (19-91)||(754-826)
[»] scaffold0206 (1 HSPs)
scaffold0206 (115-159)||(13302-13346)
[»] scaffold0176 (1 HSPs)
scaffold0176 (47-91)||(828-872)


Alignment Details
Target: chr5 (Bit Score: 69; Significance: 4e-31; HSPs: 79)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 25 - 159
Target Start/End: Original strand, 28388520 - 28388658
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcag----ttgtcgaggaggnnnnnnngtaaaatactcg 120  Q
    ||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||     || ||||| ||       ||||||||||||    
T  28388520 cggcagttaactaccgaggttttcctcggcagttaactgcagctggatttcaaattcctcggcagctaactgccgagggggcaaaagagtaaaatactcg 28388619  T
Q  121 tgtggcatagccttatgtaaagtgtaaacatcaattctc 159  Q
    ||||||| |||||||||||||||||||||| ||||||||    
T  28388620 tgtggcacagccttatgtaaagtgtaaacaacaattctc 28388658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 25890072 - 25889928
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagt----tgtcgaggaggnnnnnnngtaaaa 114  Q
    ||||| |||||||| |||||||||||||||||||| ||||||||| |  |||||||||||||||||||||||    ||  |||| ||       ||||||    
T  25890072 tttcctcggcagtttactaccgaggttttcctcggtagttaactgcagtcggatttcaaattcctcggcagtttactgctgagggggcaaaagagtaaaa 25889973  T
Q  115 tactcgtgtggcatagccttatgtaaagtgtaaacatcaattctc 159  Q
    |||| |||||||| |||||||||||||||||||||| ||||||||    
T  25889972 tacttgtgtggcacagccttatgtaaagtgtaaacagcaattctc 25889928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 34122602 - 34122530
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||| |||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||    
T  34122602 tttcctcggcagttaactaccgagcttttcctcggcagttaactgcagccggatttcaaattcctcggcagtt 34122530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 27662306 - 27662244
Alignment:
Q  1 tttttagaattatgaagatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||| |||||| |||||||    
T  27662306 tttttagaatgatgaagatttcctcggcagttaactaccgaggttttcttcggcaattaactg 27662244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 28387341 - 28387275
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||| ||||||||||| ||||||| | ||||| |||||||||||||||||||    
T  28387341 cggcagttaactaccgaggatttcctcggcaattaactgcagccggaattcaaattcctcggcagtt 28387275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 34123936 - 34124002
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||||||||||||||| |||||||||||| | |||||||||||||| |||| |||||    
T  34123936 cggcagttaactaccgaggttttccttggcagttaactgcagccggatttcaaatttctcgacagtt 34124002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 25897073 - 25897146
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||| ||||||||||||||||||| |||||| |||||||||||| | ||||| |||||||||||||| ||||    
T  25897073 atttcctcggcagttaactaccgaggatttcctgggcagttaactgcagccggagttcaaattcctcggtagtt 25897146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 7017590 - 7017518
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||| |||||||||||||||||||||||||| |  ||||||||| | |||||||||||||||||| ||||||    
T  7017590 tttcctcggcagttaactaccgaggttttccttgagagttaactgcagccggatttcaaattcctcagcagtt 7017518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 41798896 - 41798824
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||| |||||| ||||||||||||||||| |||||||||||||| | ||||||||||||||| || ||||||    
T  41798896 tttcctcggcagataactaccgaggttttcttcggcagttaactgcagccggatttcaaattcttcagcagtt 41798824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 7757406 - 7757347
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttc 75  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||| | |||||||||    
T  7757406 agatttcctcggcagttaactagcgaggttttcctcggcagttaactgcagccggatttc 7757347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 8577059 - 8577008
Alignment:
Q  12 atgaagatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  8577059 atgaagatttcctcggcagttaactaccgaggttttcttcggcagttaactg 8577008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 28238220 - 28238173
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||    
T  28238220 agatttcctcggcagttaactaccgaggttttcctcggcagttaactg 28238173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 19037471 - 19037520
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggattt 74  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  19037471 cggcagttaactaccgaggttttcctcggcagttaactgcagccggattt 19037520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 39743154 - 39743215
Alignment:
Q  30 gttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||| |||||||||||||||||||||||||| |  || |||||||||||||||||||||    
T  39743154 gttaactgccgaggttttcctcggcagttaactgcagtcgaatttcaaattcctcggcagtt 39743215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 1039835 - 1039887
Alignment:
Q  109 gtaaaatactcgtgtggcatagccttatgtaaagtgtaaacatcaattctctt 161  Q
    ||||||||||||||||||| | | |||||||||||||||||||||||||||||    
T  1039835 gtaaaatactcgtgtggcacaactttatgtaaagtgtaaacatcaattctctt 1039887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 44 - 91
Target Start/End: Original strand, 13568095 - 13568142
Alignment:
Q  44 ttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||    
T  13568095 ttttcctcggcagttaactgcagccggatttcaaattcctcggcagtt 13568142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 13837801 - 13837758
Alignment:
Q  20 ttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  13837801 ttcctcggcagttaactaccgaggttttcctcggcagttaactg 13837758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 27863483 - 27863440
Alignment:
Q  43 gttttcctcggcagttaactgtaaccggatttcaaattcctcgg 86  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  27863483 gttttcctcggcagttaactgcaaccggatttcaaattcctcgg 27863440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 542791 - 542857
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||  ||||||||||||||| ||| | ||||||||| ||||||||| |||||    
T  542791 cggcagttaactaccgagagtttcctcggcagttagctgcagccggatttctaattcctcgacagtt 542857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 27660018 - 27659976
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaac 61  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  27660018 tttcctcggcagttaactaccgaggttttcctcggcagttaac 27659976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 37820874 - 37820920
Alignment:
Q  44 ttttcctcggcagttaactgtaaccggatttcaaattcctcggcagt 90  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||    
T  37820874 ttttcctcggcagttaactgcagccggatttcaaattcctcggcagt 37820920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 38968167 - 38968101
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||| ||||||||||||||||||||||||| | ||||||||   ||||||||| ||||    
T  38968167 cggcagttaactatcgaggttttcctcggcagttaactgcagccggattttttattcctcggtagtt 38968101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 1035263 - 1035190
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||| ||||||||||||| ||||| ||||||||| | ||||||| | ||| | |||||||||||||||||||    
T  1035263 atttcctcggcagttaactatcgaggatttcctcggtaattaactgcagccgaaattcaaattcctcggcagtt 1035190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 14280894 - 14280939
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||    
T  14280894 atttcctcggccgttaactaccgaggttttcctcggcagttaactg 14280939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 18307326 - 18307289
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaact 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18307326 cggcagttaactaccgaggttttcctcggcagttaact 18307289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 25877699 - 25877631
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggca 88  Q
    ||||| ||||||||||||||||| |||||||||||||||||| || | |||| |||| ||||||||||||    
T  25877699 tttcctcggcagttaactaccgaagttttcctcggcagttaattgcagccgg-tttcgaattcctcggca 25877631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 38855713 - 38855750
Alignment:
Q  26 ggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||||||||||||||    
T  38855713 ggcagttaactaccgaggttttcctcggcagttaactg 38855750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 18538336 - 18538396
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcg 85  Q
    ||||||||||||||||| ||||||||||||||||||||| | |||| |||  |||||||||    
T  18538336 cggcagttaactaccgaagttttcctcggcagttaactgcagccggtttttgaattcctcg 18538396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 35926433 - 35926389
Alignment:
Q  26 ggcagttaactaccgaggttttcctcggcagttaactgtaaccgg 70  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||    
T  35926433 ggcagttaactaccgaggttttcctcggtagttaactgtagccgg 35926389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 1398673 - 1398610
Alignment:
Q  28 cagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||||||| ||| |||||||| |||||| | |  |||||||||||||||    
T  1398673 cagttaactaccgaggttttccttggctgttaactgcaaccggttattgaattcctcggcagtt 1398610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 91
Target Start/End: Original strand, 7021878 - 7021925
Alignment:
Q  44 ttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||||||||| | |||||||||||||||||| ||||||    
T  7021878 ttttcctcggcagttaactgcagccggatttcaaattcctcagcagtt 7021925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 8702202 - 8702265
Alignment:
Q  28 cagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||||||||||||| ||||||||||| |  | |||||  |||||||||||||||    
T  8702202 cagttaactaccgaggttttcctcagcagttaactgcagtcagatttttaattcctcggcagtt 8702265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 11346076 - 11346041
Alignment:
Q  28 cagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||||||||||||    
T  11346076 cagttaactaccgaggttttcctcggcagttaactg 11346041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 19041109 - 19041156
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| |||||||||||||||||||||||| ||||||| ||||||    
T  19041109 agatttcctcggcagttaactaccgaggttttcttcggcagctaactg 19041156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 28876724 - 28876677
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| |||||||||||| |||||||||||||||| |||||||||    
T  28876724 agatttcctcggcagttaactgccgaggttttcctcgggagttaactg 28876677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 31787598 - 31787559
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagtt 58  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  31787598 tttcctcggcagttaactaccgaggttttcctcggcagtt 31787559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 37814663 - 37814616
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||  ||||||||||||||| |||||||||||||||||||||||    
T  37814663 agatttcttcggcagttaactaccaaggttttcctcggcagttaactg 37814616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 41201797 - 41201762
Alignment:
Q  28 cagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||||||||||||    
T  41201797 cagttaactaccgaggttttcctcggcagttaactg 41201762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 8052 - 8098
Alignment:
Q  29 agttaactaccgaggttttcctcggcagttaactgtaaccggatttc 75  Q
    |||||||||||||| |||||||||||||||||||| ||||| |||||    
T  8052 agttaactaccgagattttcctcggcagttaactgcaaccgtatttc 8098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 3603149 - 3603187
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  3603149 cggcagttaactaccgaggttttcctcggaagttaactg 3603187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 4204212 - 4204250
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  4204212 cggcagttaactaccgaggttttcctcgacagttaactg 4204250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 19035310 - 19035272
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  19035310 cggcagttaactaccgaggttttcctcggcacttaactg 19035272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 25497583 - 25497545
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  25497583 cggcagttaactaccgagattttcctcggcagttaactg 25497545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 62
Target Start/End: Original strand, 30705167 - 30705205
Alignment:
Q  24 gcggcagttaactaccgaggttttcctcggcagttaact 62  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  30705167 gcggcagttaactaccgaggatttcctcggcagttaact 30705205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 34682325 - 34682263
Alignment:
Q  29 agttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||| |||||||||||||||||||||||||| | |||| |||  ||||||||| |||||    
T  34682325 agttaactcccgaggttttcctcggcagttaactgcagccggtttttgaattcctcgacagtt 34682263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 5847 - 5810
Alignment:
Q  26 ggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||||||||||||||| |||||||    
T  5847 ggcagttaactaccgaggttttcctcggcaattaactg 5810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 11028998 - 11029043
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||| |||||||||||| |||||| |||||||||||||||||||    
T  11028998 atttcctcggcagttaactcccgaggatttcctcggcagttaactg 11029043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 30708975 - 30708926
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggattt 74  Q
    |||||||||||| ||||||||| |||||||||||||||| | ||||||||    
T  30708975 cggcagttaactcccgaggtttccctcggcagttaactgcagccggattt 30708926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 33995143 - 33995184
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaa 60  Q
    ||||| |||||||||||| |||||||||||||||||||||||    
T  33995143 tttcctcggcagttaactcccgaggttttcctcggcagttaa 33995184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 7762239 - 7762295
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttc 75  Q
    ||||| |||||||||||| | ||||||||||||| |||||||||| ||||| |||||    
T  7762239 tttcctcggcagttaactcctgaggttttcctcgacagttaactgcaaccgaatttc 7762295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 17965927 - 17965883
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||||| ||||||||||| |||||||||||||||||||||    
T  17965927 tttcctcggcaattaactaccgatgttttcctcggcagttaactg 17965883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 17966889 - 17966953
Alignment:
Q  27 gcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||||| |||||||||| ||||||||| |  |||||||  |||| ||||||||||    
T  17966889 gcagttaactaccgagattttcctcggtagttaactgcagtcggatttttaatttctcggcagtt 17966953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 30354400 - 30354440
Alignment:
Q  28 cagttaactaccgaggttttcctcggcagttaactgtaacc 68  Q
    ||||||||||||||||||||||||| |||||||||| ||||    
T  30354400 cagttaactaccgaggttttcctcgacagttaactgcaacc 30354440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 30708868 - 30708912
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||    
T  30708868 tttcctcggcagttaactatcgaggttttcttcggcagttaactg 30708912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 36503106 - 36503142
Alignment:
Q  27 gcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||| |||||||||||||||    
T  36503106 gcagttaactaccgaggtttttctcggcagttaactg 36503142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 91
Target Start/End: Original strand, 27867840 - 27867887
Alignment:
Q  44 ttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||| ||||| | ||||| |||||||||||||||||||    
T  27867840 ttttcctcggcagtaaactgcagccggaattcaaattcctcggcagtt 27867887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 161
Target Start/End: Original strand, 42912967 - 42913018
Alignment:
Q  110 taaaatactcgtgtggcatagccttatgtaaagtgtaaacatcaattctctt 161  Q
    |||||||||||||||||| ||||||||  || ||||||||| ||||||||||    
T  42912967 taaaatactcgtgtggcacagccttatcaaatgtgtaaacagcaattctctt 42913018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 64
Target Start/End: Original strand, 4203912 - 4203942
Alignment:
Q  34 actaccgaggttttcctcggcagttaactgt 64  Q
    |||||||||||||||||||||||||||||||    
T  4203912 actaccgaggttttcctcggcagttaactgt 4203942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 13838425 - 13838463
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  13838425 cggcagttaactgccgaggttttcctcggtagttaactg 13838463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 20200149 - 20200187
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||| || |||||||||||||||||||||    
T  20200149 cggcagttaactacagatgttttcctcggcagttaactg 20200187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 162
Target Start/End: Complemental strand, 30705114 - 30705068
Alignment:
Q  116 actcgtgtggcatagccttatgtaaagtgtaaacatcaattctcttg 162  Q
    |||||||||||| ||||||||| || ||||||||| |||||||||||    
T  30705114 actcgtgtggcacagccttatgaaatgtgtaaacaacaattctcttg 30705068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 38408509 - 38408471
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  38408509 cggcagttaactcccgaggatttcctcggcagttaactg 38408471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 1396338 - 1396293
Alignment:
Q  45 tttcctcggcagttaactgtaaccggatttcaaattcctcggcagt 90  Q
    |||||||| |||||||||  ||||||||||| ||||||||||||||    
T  1396338 tttcctcgacagttaactacaaccggatttctaattcctcggcagt 1396293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 7021572 - 7021617
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgt 64  Q
    ||||| ||||| | ||||||||| ||||||||||||||||||||||    
T  7021572 tttcctcggcactaaactaccgaagttttcctcggcagttaactgt 7021617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 28880394 - 28880361
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagtt 58  Q
    |||||||||| |||||||||||||||||||||||    
T  28880394 cggcagttaattaccgaggttttcctcggcagtt 28880361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 33993352 - 33993315
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaact 62  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  33993352 cggcagttaactaccgaggtttttcacggcagttaact 33993315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 39742654 - 39742609
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||| ||| |||||||| | ||||||||||||||||||||||||    
T  39742654 atttcctcggtagttaactgctgaggttttcctcggcagttaactg 39742609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 42098382 - 42098337
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||| ||| |||||||  ||||||||||||||||||||||||||    
T  42098382 atttcctcggtagttaaccgccgaggttttcctcggcagttaactg 42098337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 42539375 - 42539412
Alignment:
Q  26 ggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||| | |||||||||||||||||||||    
T  42539375 ggcagttaactaccaaagttttcctcggcagttaactg 42539412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 8158 - 8118
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcag 56  Q
    |||||||  |||||||||||||||||||||||| |||||||    
T  8158 agatttcgtcggcagttaactaccgaggttttcttcggcag 8118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 511073 - 511117
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||||||||||||||||||||||||||  ||||| |||||    
T  511073 tttcctcggcagttaactaccgaggttttcctgagcagtaaactg 511117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 541004 - 540960
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||||||||||||||||||  |||||||| ||||||||||    
T  541004 tttcctcggcagttaactaccgagaatttcctcgacagttaactg 540960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 13567789 - 13567833
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||||| | ||||||||| |||||||||||||||||||||    
T  13567789 tttcctcggcactaaactaccgaagttttcctcggcagttaactg 13567833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 25499888 - 25499948
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcg 85  Q
    ||||| ||||||||  ||||||||||||||||||||| | |||||| |||  |||||||||    
T  25499888 cggcacttaactactaaggttttcctcggcagttaaccgcaaccggtttttgaattcctcg 25499948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 25983447 - 25983403
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||| ||||||||||||| ||||||||||| |||||||||    
T  25983447 tttcctcggtagttaactaccgatgttttcctcggtagttaactg 25983403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 27532612 - 27532656
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| |||||||||||| |||||||||||||||  |||||||||    
T  27532612 tttcctcggcagttaactgccgaggttttcctcgatagttaactg 27532656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 27673748 - 27673792
Alignment:
Q  116 actcgtgtggcatagccttatgtaaagtgtaaacatcaattctct 160  Q
    |||||||||||||||||||||  || ||||||||| |||||||||    
T  27673748 actcgtgtggcatagccttatcaaatgtgtaaacaacaattctct 27673792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 29430573 - 29430617
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||| |||||||| |||||||||||||| |||||||||||    
T  29430573 tttcctcggtagttaactgccgaggttttcctcagcagttaactg 29430617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 41799770 - 41799834
Alignment:
Q  27 gcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||| |||| |||||| |||||||||||||| | |  |||||| |||||||| ||||||    
T  41799770 gcagttaacttccgaagttttcatcggcagttaactgcagctagatttctaattcctcagcagtt 41799834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 15950 - 16095
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagt----tgtcgaggaggnnnnnnngtaaaa 114  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||    || |||||  |       ||||||    
T  15950 tttcctcggaagttaactaccgaggttttcctcggcagttaactgcagctggatttcaaattcctcggcagttaactgccgagggagcaaatgagtaaaa 16049  T
Q  115 tactcgtgtggcatagccttatgtaaagtgtaaacatcaattctct 160  Q
    ||||||||||||| | |||||||||||||||||||| |||||||||    
T  16050 tactcgtgtggcacaaccttatgtaaagtgtaaacagcaattctct 16095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 11353 - 11307
Alignment:
Q  45 tttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||| ||||||||| | ||||| |||||||||||||||||||    
T  11353 tttcctcggaagttaactgcagccggaattcaaattcctcggcagtt 11307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 116)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 4002500 - 4002643
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagt----tgtcgaggaggnnnnnnngtaaaa 114  Q
    ||||| |||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||| | |||    || ||||| ||       ||||||    
T  4002500 tttcctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcagtagttaactgccgagg-ggcaaaagagtaaaa 4002598  T
Q  115 tactcgtgtggcatagccttatgtaaagtgtaaacatcaattctc 159  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||    
T  4002599 tactcgtgtggcacagccttatgtaaagtgtaaacagcaattctc 4002643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 18 - 161
Target Start/End: Complemental strand, 14398614 - 14398467
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt----gtcgaggaggnnnnnnngtaaa 113  Q
    |||||| || ||||||||| |||||| || |||||||||||||||| | ||||| |||||||||||||||||||    | |||||||        |||||    
T  14398614 atttcctcgacagttaacttccgaggattccctcggcagttaactgcagccggaattcaaattcctcggcagttaaccgccgaggagataaaatcgtaaa 14398515  T
Q  114 atactcgtgtggcatagccttatgtaaagtgtaaacatcaattctctt 161  Q
    ||||||||||| || |||||||||||||||||||||| ||||||||||    
T  14398514 atactcgtgtgacacagccttatgtaaagtgtaaacaacaattctctt 14398467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 2743476 - 2743404
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||| |||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  2743476 tttcctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagtt 2743404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 164
Target Start/End: Complemental strand, 36812915 - 36812765
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccgga-tttcaaattcctcggcag----ttgtcgaggaggnnnnnnngtaaa 113  Q
    ||||| |||||||| |||||||||||||||||||| ||||||||| | ||||| ||||||||||||||| ||     || ||||| ||       |||||    
T  36812915 tttcctcggcagtttactaccgaggttttcctcggtagttaactgcagccggattttcaaattcctcggtagctaactgccgagggggcaaaagagtaaa 36812816  T
Q  114 atactcgtgtggcatagccttatgtaaagtgtaaacatcaattctcttgga 164  Q
    |||||||||||||| | |||||||||||||||||||| |||||||| ||||    
T  36812815 atactcgtgtggcacatccttatgtaaagtgtaaacagcaattctcatgga 36812765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 159
Target Start/End: Original strand, 14402989 - 14403109
Alignment:
Q  43 gttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt----gtcgaggaggnnnnnnngtaaaatactcgtgtggcatagccttatgt 138  Q
    ||||||||||||||||||||    |||||||||||||||||||||||||    | ||||| ||       ||||||||||||||||||| ||||||||||    
T  14402989 gttttcctcggcagttaactaccgccggatttcaaattcctcggcagttaactgccgagggggcaaaagagtaaaatactcgtgtggcacagccttatgt 14403088  T
Q  139 aaagtgtaaacatcaattctc 159  Q
    |||||||||||| ||||||||    
T  14403089 aaagtgtaaacaacaattctc 14403109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 20918012 - 20918078
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||    
T  20918012 cggcagttaactaccgaggttttcctcggcagttaactgtagccggatttttaattcatcggcagtt 20918078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 20926974 - 20927040
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||    
T  20926974 cggcagttaactaccgaggttttcctcggcagttaactgtagccggatttttaattcatcggcagtt 20927040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 24700799 - 24700727
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||| ||||||||||| ||||||||| |||||    
T  24700799 tttcctcggcagttaactaccgaggatttcctcgggagttaactgcaaccggatttctaattcctcgacagtt 24700727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 41803070 - 41803004
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||||||||||||||||||||||| | |||| ||| |||||| |||||||||    
T  41803070 cggcagttaactaccgaggttttcctcggcagttaactgcagccggtttttaaattcttcggcagtt 41803004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 48250870 - 48250936
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||| |||||||||||||||||||||||||| | ||||| |||||||||||| ||||||    
T  48250870 cggcagttaactcccgaggttttcctcggcagttaactgcagccggaattcaaattcctcagcagtt 48250936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 49219796 - 49219858
Alignment:
Q  29 agttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||| ||||||||||||||||||||||| | ||||||||| |||||||||||||||    
T  49219796 agttaactaccaaggttttcctcggcagttaactgcagccggatttctaattcctcggcagtt 49219858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 1835237 - 1835294
Alignment:
Q  1 tttttagaattatgaagatttccgcggcagttaactaccgaggttttcctcggcagtt 58  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||    
T  1835237 tttttagaatgatgaagatttcctcggcagttaactaccgaggttttcttcggcagtt 1835294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 41844324 - 41844267
Alignment:
Q  1 tttttagaattatgaagatttccgcggcagttaactaccgaggttttcctcggcagtt 58  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||    
T  41844324 tttttagaatgatgaagatttcctcggcagttaactaccgaggttttcttcggcagtt 41844267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 9429844 - 9429916
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||| ||||||||||||||||||||||||||||| | ||||||| | ||  |||||||||||||||||||||    
T  9429844 tttcctcggcagttaactaccgaggttttcctcggtacttaactgcagccaaatttcaaattcctcggcagtt 9429916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 13747714 - 13747785
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||| |||||||||||||| |||||||||||| ||||||||||| | ||||||||||||||| |||||||||    
T  13747714 tttcctcggcagttaactac-gaggttttcctcagcagttaactgcagccggatttcaaattcatcggcagtt 13747785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 19341589 - 19341661
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||| |||||||||||| |||| ||||||||||| ||||||||| | ||||||||| |||||||||||||||    
T  19341589 tttcctcggcagttaactgccgaagttttcctcggtagttaactgcagccggatttctaattcctcggcagtt 19341661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 34691703 - 34691631
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||| |||||||||||||||||||||||||||| |||||||||| | ||||||||  | |||||||||||||    
T  34691703 tttcctcggcagttaactaccgaggttttcctcgacagttaactgcagccggatttttatttcctcggcagtt 34691631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 46989617 - 46989553
Alignment:
Q  27 gcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||||||||||||||||||||| | ||||| |||||||| ||||| ||||    
T  46989617 gcagttaactaccgaggttttcctcggcagttaactgcagccggaattcaaatttctcggtagtt 46989553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 48888811 - 48888747
Alignment:
Q  26 ggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagt 90  Q
    ||||||||||||||||| |||||||||||||||||||| | ||||||||  ||||||||||||||    
T  48888811 ggcagttaactaccgagattttcctcggcagttaactgcagccggatttttaattcctcggcagt 48888747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 49268837 - 49268905
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctc 84  Q
    |||||||  ||||||||||||||||| ||||||||||||||||||||| ||||||||||  ||||||||    
T  49268837 agatttcttcggcagttaactaccgatgttttcctcggcagttaactgcaaccggatttttaattcctc 49268905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 46697792 - 46697745
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||    
T  46697792 agatttcctcggcagttaactaccgaggttttcctcggcagttaactg 46697745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 34049157 - 34049103
Alignment:
Q  20 ttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggattt 74  Q
    |||| ||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  34049157 ttcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggattt 34049103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 42756231 - 42756165
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||  ||||||||||||||||||||||||| ||||||||||  ||||||||| |||||    
T  42756231 cggcagttaactctcgaggttttcctcggcagttaactgcaaccggatttttaattcctcgacagtt 42756165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 50477260 - 50477214
Alignment:
Q  17 gatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||    
T  50477260 gatttcctcggcagttaactaccgaggttttcctcggcagttaactg 50477214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 54389872 - 54389818
Alignment:
Q  20 ttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggattt 74  Q
    |||| ||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  54389872 ttcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggattt 54389818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 2647700 - 2647749
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggattt 74  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  2647700 cggcagttaactaccgaggttttcctcggcagttaactgcagccggattt 2647749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 30943268 - 30943223
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  30943268 atttcctcggcagttaactaccgaggttttcctcggcagttaactg 30943223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 35743576 - 35743621
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  35743576 atttcctcggcagttaactaccgaggttttcctcggcagttaactg 35743621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 36817515 - 36817588
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||| ||||||||||||||||||| ||||||||  ||||||||| | ||||| |||||||||||||| ||||    
T  36817515 atttcctcggcagttaactaccgaggatttcctcgatagttaactgcagccggagttcaaattcctcggtagtt 36817588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 43476264 - 43476215
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggattt 74  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  43476264 cggcagttaactaccgaggttttcctcggcagttaactgcagccggattt 43476215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 13743347 - 13743299
Alignment:
Q  43 gttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||    
T  13743347 gttttcctcggcagttaactgcagccggatttcaaattcctcggcagtt 13743299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 30256006 - 30256070
Alignment:
Q  27 gcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||| ||||||||||||||||||||||||| | |||| |||  |||||||||||||||    
T  30256006 gcagttaactatcgaggttttcctcggcagttaactgcagccggttttttaattcctcggcagtt 30256070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 41137772 - 41137724
Alignment:
Q  43 gttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||    
T  41137772 gttttcctcggcagttaactgcagccggatttcaaattcctcggcagtt 41137724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 41844359 - 41844403
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  41844359 tttcctcggcagttaactaccgaggttttcctcggcagttaactg 41844403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 43478825 - 43478881
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttc 75  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||| | |||||||||    
T  43478825 tttcctcggcagttaactaccgaagttttcctcggcagttaactgcagccggatttc 43478881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 48246490 - 48246434
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttc 75  Q
    ||||| |||||||||||||||||||||||||||| |||||||||| | |||||||||    
T  48246490 tttcctcggcagttaactaccgaggttttcctcgacagttaactgcagccggatttc 48246434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 600536 - 600583
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||    
T  600536 agatttcctcggcagttaactaccgaggttttcctcgacagttaactg 600583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 11380514 - 11380447
Alignment:
Q  24 gcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||| ||||||||||||| ||||||||||||||||| ||||  ||||  |||||||||||||||    
T  11380514 gcggcagtaaactaccgaggttatcctcggcagttaactgcaaccatatttttaattcctcggcagtt 11380447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 42165244 - 42165197
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  42165244 agatttcctcggcagttaactaccgaggttttcctcggcaattaactg 42165197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 49144448 - 49144495
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||    
T  49144448 agatttcctcggcagttaactaccgaggttttcttcggcagttaactg 49144495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 55385206 - 55385159
Alignment:
Q  28 cagttaactaccgaggttttcctcggcagttaactgtaaccggatttc 75  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||    
T  55385206 cagttaactaccgaggttttcctcggcagttaactgcagccggatttc 55385159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 4004804 - 4004854
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttc 75  Q
    |||||||||| |||||||||||||||||||||||||||| | |||||||||    
T  4004804 cggcagttaagtaccgaggttttcctcggcagttaactgcagccggatttc 4004854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 8475910 - 8475860
Alignment:
Q  13 tgaagatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||||| | |||||||||||||||||||||||||||||||||||||    
T  8475910 tgaagttttcctcagcagttaactaccgaggttttcctcggcagttaactg 8475860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 19440328 - 19440290
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19440328 cggcagttaactaccgaggttttcctcggcagttaactg 19440290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 29918342 - 29918408
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||| ||||||||||||||||||||||||| | |||| |||| ||||  |||||||||    
T  29918342 cggcagttaactaacgaggttttcctcggcagttaactgcagccggttttcgaattattcggcagtt 29918408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 29967495 - 29967561
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||| ||||||||||||||||||||||||| | |||| |||| ||||  |||||||||    
T  29967495 cggcagttaactaacgaggttttcctcggcagttaactgcagccggttttcgaattattcggcagtt 29967561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 34694435 - 34694501
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||| |||||||||| |||||||||| |||| | ||||||||| ||||||||| |||||    
T  34694435 cggcagttaactcccgaggtttttctcggcagtttactgcagccggatttctaattcctcgacagtt 34694501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 41579725 - 41579763
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  41579725 cggcagttaactaccgaggttttcctcggcagttaactg 41579763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 62
Target Start/End: Original strand, 42760209 - 42760247
Alignment:
Q  24 gcggcagttaactaccgaggttttcctcggcagttaact 62  Q
    |||||||||||||||||||||||||||||||||||||||    
T  42760209 gcggcagttaactaccgaggttttcctcggcagttaact 42760247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 49140843 - 49140897
Alignment:
Q  20 ttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggattt 74  Q
    |||| |||||||||||||| |||||||||||||||||||||||| | ||||||||    
T  49140843 ttcctcggcagttaactactgaggttttcctcggcagttaactgcagccggattt 49140897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 89
Target Start/End: Original strand, 50957685 - 50957731
Alignment:
Q  43 gttttcctcggcagttaactgtaaccggatttcaaattcctcggcag 89  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||    
T  50957685 gttttcctcggcagttaactgcagccggatttcaaattcctcggcag 50957731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 3501897 - 3501934
Alignment:
Q  26 ggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3501897 ggcagttaactaccgaggttttcctcggcagttaactg 3501934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 3953209 - 3953254
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||    
T  3953209 atttcctcggcagttaactcccgaggttttcctcggcagttaactg 3953254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 6489407 - 6489338
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggca 88  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||| | |||| ||   ||||||||||||    
T  6489407 tttcctcggcagttaactaccgaggatttcctcggcagttaactgcagccggtttcttaattcctcggca 6489338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 6745320 - 6745365
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||    
T  6745320 atttcctcggcagttaactaccgaggttttccttggcagttaactg 6745365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 8156587 - 8156542
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||    
T  8156587 atttcctcggcagttaactgccgaggttttcctcggcagttaactg 8156542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 44227184 - 44227147
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaact 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  44227184 cggcagttaactaccgaggttttcctcggcagttaact 44227147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 4015119 - 4015167
Alignment:
Q  14 gaagatttccgcggcagttaactaccgaggttttcctcggcagttaact 62  Q
    |||| ||||| |||||||||||| |||||||||||||||||||||||||    
T  4015119 gaagttttcctcggcagttaacttccgaggttttcctcggcagttaact 4015167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 34712754 - 34712798
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||| |||||||||||||||| |||||||||    
T  34712754 tttccgcggcagttaactgccgaggttttcctcgggagttaactg 34712798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 1293454 - 1293411
Alignment:
Q  20 ttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||| |||||||||||| ||||||||||||||||||||||||||    
T  1293454 ttcctcggcagttaactcccgaggttttcctcggcagttaactg 1293411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 2967917 - 2967964
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| |||||||||||||||||||||||| ||||||| ||||||    
T  2967917 agatttcctcggcagttaactaccgaggttttcttcggcagctaactg 2967964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 7247864 - 7247927
Alignment:
Q  28 cagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||||||||| |||||||||| | |||| | |  |||||||||||||||    
T  7247864 cagttaactaccgaggttttcctcgtcagttaactgcagccggttattgaattcctcggcagtt 7247927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 41612398 - 41612437
Alignment:
Q  24 gcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  41612398 gcggcagttaactaccgaggatttcctcggcagttaactg 41612437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 160
Target Start/End: Original strand, 42166498 - 42166549
Alignment:
Q  109 gtaaaatactcgtgtggcatagccttatgtaaagtgtaaacatcaattctct 160  Q
    ||||| ||||||||||||| | |||||||||| |||||||||||||||||||    
T  42166498 gtaaagtactcgtgtggcacaaccttatgtaatgtgtaaacatcaattctct 42166549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 62
Target Start/End: Complemental strand, 48566438 - 48566403
Alignment:
Q  27 gcagttaactaccgaggttttcctcggcagttaact 62  Q
    ||||||||||||||||||||||||||||||||||||    
T  48566438 gcagttaactaccgaggttttcctcggcagttaact 48566403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 49196453 - 49196516
Alignment:
Q  28 cagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||| || |||||||||||| ||||||||| ||||||||||  ||||||||| |||||    
T  49196453 cagttaactatcgcggttttcctcggtagttaactgcaaccggatttttaattcctcgacagtt 49196516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 58
Target Start/End: Complemental strand, 2271437 - 2271395
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagtt 58  Q
    |||||||| |||||||||||| |||||||||||||||||||||    
T  2271437 agatttcctcggcagttaactcccgaggttttcctcggcagtt 2271395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 2432944 - 2433010
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||| |||||||||||| |||||||||||| |||| | |  ||||||||| |||||    
T  2432944 cggcagttaactaccaaggttttcctcgacagttaactgtatccggttattgaattcctcgacagtt 2433010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 2950438 - 2950400
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  2950438 cggcagttaactaccgaggttttcctcggcacttaactg 2950400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 58
Target Start/End: Complemental strand, 4004927 - 4004885
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagtt 58  Q
    |||||||| |||||||||||||||||||||||||||| |||||    
T  4004927 agatttcctcggcagttaactaccgaggttttcctcgacagtt 4004885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 4331908 - 4331958
Alignment:
Q  109 gtaaaatactcgtgtggcatagccttatgtaaagtgtaaacatcaattctc 159  Q
    ||||| ||||||||||||| |||||||||||| ||||||||| ||||||||    
T  4331908 gtaaagtactcgtgtggcacagccttatgtaatgtgtaaacagcaattctc 4331958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 13896877 - 13896915
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  13896877 cggcagttaactaccgaggttttcctcgacagttaactg 13896915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 16484451 - 16484505
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatt 73  Q
    ||||| |||||||||||| |||| ||||||||||||||||||||| | |||||||    
T  16484451 tttcctcggcagttaactcccgaagttttcctcggcagttaactgcagccggatt 16484505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 28611101 - 28611167
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||  ||||||||||||||||||||| | |||| |||  |||| ||||||||||    
T  28611101 cggcagttaactaccgttgttttcctcggcagttaactgcagccggtttttgaatttctcggcagtt 28611167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 36134395 - 36134357
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  36134395 cggcagttaactcccgaggttttcctcggcagttaactg 36134357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 46406592 - 46406630
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  46406592 cggcagttaactaccgaggttttcctcggcacttaactg 46406630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 49138686 - 49138648
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  49138686 cggcagttaactaccgaggttttcctcggcacttaactg 49138648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 52387879 - 52387833
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaact 62  Q
    |||||||| ||||||||||||||||| |||||| |||||||||||||    
T  52387879 agatttcctcggcagttaactaccgaagttttcgtcggcagttaact 52387833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 54392029 - 54392067
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  54392029 cggcagttaactaccgaggttttcctcggcacttaactg 54392067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 55207664 - 55207730
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||| ||||| |||| |||||||||||| |||||| |||  ||||| |||||||||    
T  55207664 cggcagttaactaccaaggttgtcctaggcagttaactgcaaccggtttttgaattcttcggcagtt 55207730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 42166404 - 42166449
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||| ||||||||||||||||| |||||||||||||||| ||||    
T  42166404 atttcctcggcagttaactaccgaagttttcctcggcagtttactg 42166449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 49609460 - 49609395
Alignment:
Q  20 ttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcg 85  Q
    |||| ||||||||||||||||||||||| |||| || |||||||   ||| |||||||||||||||    
T  49609460 ttcctcggcagttaactaccgaggtttttctcgacaattaactgcggccgaatttcaaattcctcg 49609395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 51402399 - 51402436
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaact 62  Q
    |||||||||||||||||||||||||||| |||||||||    
T  51402399 cggcagttaactaccgaggttttcctcgacagttaact 51402436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 2647807 - 2647763
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||||||||||| |||||||||||| ||||||||||||||    
T  2647807 tttcctcggcagttaaccaccgaggttttcttcggcagttaactg 2647763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 36134267 - 36134311
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaa 60  Q
    |||||| | |||||||||||||||||||||||||| |||||||||    
T  36134267 agattttctcggcagttaactaccgaggttttccttggcagttaa 36134311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 41844227 - 41844183
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||| ||||||||||||||||||||||| |||||||||||    
T  41844227 tttcctcggtagttaactaccgaggttttcctcagcagttaactg 41844183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 63
Target Start/End: Complemental strand, 46345003 - 46344971
Alignment:
Q  31 ttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||||||||||||||||||    
T  46345003 ttaactaccgaggttttcctcggcagttaactg 46344971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 4008315 - 4008362
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| |||||||||||| |||||||||| |||| ||||||||||    
T  4008315 agatttcctcggcagttaactcccgaggtttttctcgacagttaactg 4008362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 6143748 - 6143705
Alignment:
Q  20 ttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||| |||||||||||| |||| |||||||||||||||||||||    
T  6143748 ttcctcggcagttaactgccgaagttttcctcggcagttaactg 6143705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 29929498 - 29929463
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaa 60  Q
    ||||||||||||| ||||||||||||||||||||||    
T  29929498 cggcagttaactatcgaggttttcctcggcagttaa 29929463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 29978652 - 29978617
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaa 60  Q
    ||||||||||||| ||||||||||||||||||||||    
T  29978652 cggcagttaactatcgaggttttcctcggcagttaa 29978617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 42165148 - 42165097
Alignment:
Q  109 gtaaaatactcgtgtggcatagccttatgtaaagtgtaaacatcaattctct 160  Q
    ||||||||||||||||||| ||||||||  || ||||||||| |||||||||    
T  42165148 gtaaaatactcgtgtggcacagccttatcaaatgtgtaaacaacaattctct 42165097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 48566420 - 48566377
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaact 62  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||||    
T  48566420 tttcctcggcagttaactaccgaagttttcctcggtagttaact 48566377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 50481426 - 50481387
Alignment:
Q  24 gcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||| |||||||||||| |||||||||||||||||||    
T  50481426 gcggcagctaactaccgaggatttcctcggcagttaactg 50481387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 1294078 - 1294116
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  1294078 cggcagttaactgccgaggttttcctcggaagttaactg 1294116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 55
Target Start/End: Complemental strand, 2267128 - 2267098
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggca 55  Q
    |||||||||||||||||||||||||||||||    
T  2267128 cggcagttaactaccgaggttttcctcggca 2267098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 2271314 - 2271364
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttc 75  Q
    |||||||||||| |||||| || |||||||||||||||| | |||||||||    
T  2271314 cggcagttaactcccgaggattccctcggcagttaactgcagccggatttc 2271364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 4015217 - 4015267
Alignment:
Q  109 gtaaaatactcgtgtggcatagccttatgtaaagtgtaaacatcaattctc 159  Q
    ||||| |||||||||| || |||||||||||| ||||||||| ||||||||    
T  4015217 gtaaagtactcgtgtgacacagccttatgtaatgtgtaaacagcaattctc 4015267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 14043899 - 14043937
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||| |||| |||||||||||||||||||||    
T  14043899 cggcagttaactgccgaagttttcctcggcagttaactg 14043937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 17561808 - 17561854
Alignment:
Q  17 gatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||| ||||||||||||| ||||| ||||||||||||| |||||    
T  17561808 gatttcctcggcagttaactatcgaggatttcctcggcagtaaactg 17561854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 23443131 - 23443173
Alignment:
Q  49 ctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||| | ||||| |||||||||||||||||||    
T  23443131 ctcggcagttaactgcagccggaattcaaattcctcggcagtt 23443173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 34051318 - 34051352
Alignment:
Q  29 agttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||| |||||||    
T  34051318 agttaactaccgaggttttcctcggcacttaactg 34051352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 50604421 - 50604459
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  50604421 cggcagttaactgccgaggttttcctcggtagttaactg 50604459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 83
Target Start/End: Complemental strand, 50953354 - 50953316
Alignment:
Q  45 tttcctcggcagttaactgtaaccggatttcaaattcct 83  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  50953354 tttcctcggcagttaactgcagccggatttcaaattcct 50953316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 59
Target Start/End: Original strand, 50998655 - 50998689
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagtta 59  Q
    |||||||||||||||||||||||||||| ||||||    
T  50998655 cggcagttaactaccgaggttttcctcgacagtta 50998689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 52570567 - 52570605
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  52570567 cggcagttaactaccgaggtttttctcggtagttaactg 52570605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 10492868 - 10492909
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaa 60  Q
    ||||| |||||||||||| |||| ||||||||||||||||||    
T  10492868 tttcctcggcagttaactgccgaagttttcctcggcagttaa 10492909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 63
Target Start/End: Original strand, 46992934 - 46992963
Alignment:
Q  34 actaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||||||    
T  46992934 actaccgaggttttcctcggcagttaactg 46992963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 1835334 - 1835366
Alignment:
Q  31 ttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||| |||||||||||||||    
T  1835334 ttaactaccgaggtttttctcggcagttaactg 1835366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 2645534 - 2645490
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||| |||||||| ||||||||||||||||| ||||||||    
T  2645534 tttcctcggtagttaactgccgaggttttcctcggctgttaactg 2645490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 3493667 - 3493623
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| |||||||||||| |||||||||| ||| |||||||||||    
T  3493667 tttcctcggcagttaactcccgaggtttttctctgcagttaactg 3493623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 3497361 - 3497317
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| |||||||||||| |||||||||| ||| |||||||||||    
T  3497361 tttcctcggcagttaactcccgaggtttttctctgcagttaactg 3497317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 7841175 - 7841127
Alignment:
Q  43 gttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||||||| || | || ||||||||||||||||| ||||    
T  7841175 gttttcctcggcagttaaatgcagccagatttcaaattcctcggtagtt 7841127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 27738683 - 27738639
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||| |||| |||||||| |||||||||||||||||||||    
T  27738683 tttcctcggtagtttactaccgaagttttcctcggcagttaactg 27738639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 34712303 - 34712267
Alignment:
Q  27 gcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||| |||||||||||||||| |||||||||    
T  34712303 gcagttaactgccgaggttttcctcggtagttaactg 34712267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 44523456 - 44523492
Alignment:
Q  27 gcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||| || ||||||||||||||||||||||||    
T  44523456 gcagttaacaactgaggttttcctcggcagttaactg 44523492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 4e-25; HSPs: 98)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 9890066 - 9890000
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  9890066 cggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagtt 9890000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 15995800 - 15995731
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggca 88  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  15995800 tttcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggca 15995731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 19069265 - 19069196
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggca 88  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  19069265 tttcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggca 19069196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 15999793 - 15999866
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||| |||||||||||||||||||||||||||||||||||| || | |||||||||||||| ||||||||||    
T  15999793 atttcctcggcagttaactaccgaggttttcctcggcagttaattgcagccggatttcaaatttctcggcagtt 15999866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 41023458 - 41023392
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||| ||||||| ||||||||||| | |||||||||||||| ||||||||||    
T  41023458 cggcagttaactaccgaggatttcctcagcagttaactgcagccggatttcaaatttctcggcagtt 41023392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 19073656 - 19073713
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcc 82  Q
    ||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||    
T  19073656 cggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaattcc 19073713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 37563240 - 37563183
Alignment:
Q  1 tttttagaattatgaagatttccgcggcagttaactaccgaggttttcctcggcagtt 58  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||    
T  37563240 tttttagaatgatgaagatttcctcggcagttaactaccgaggttttcttcggcagtt 37563183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 39773510 - 39773567
Alignment:
Q  1 tttttagaattatgaagatttccgcggcagttaactaccgaggttttcctcggcagtt 58  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||    
T  39773510 tttttagaatgatgaagatttcctcggcagttaactaccgaggttttcttcggcagtt 39773567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 54633975 - 54633918
Alignment:
Q  1 tttttagaattatgaagatttccgcggcagttaactaccgaggttttcctcggcagtt 58  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||    
T  54633975 tttttagaatgatgaagatttcctcggcagttaactaccgaggttttcttcggcagtt 54633918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 55407794 - 55407858
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcag 89  Q
    |||||||||||||||||| |||||||||||||||||||| | ||||||||  |||||||||||||    
T  55407794 cggcagttaactaccgagattttcctcggcagttaactgcagccggatttttaattcctcggcag 55407858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 8109472 - 8109397
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||| | |||||||||| |||||||||||||||||||||||||||| |||||| |  ||||||||| |||||    
T  8109472 agatttcctcagcagttaactcccgaggttttcctcggcagttaactgtagccggatatttaattcctcgacagtt 8109397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 21022880 - 21022927
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||    
T  21022880 agatttcctcggcagttaactaccgaggttttcctcggcagttaactg 21022927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 30726733 - 30726780
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||    
T  30726733 agatttcctcggcagttaactaccgaggttttcctcggcagttaactg 30726780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 31425310 - 31425357
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||    
T  31425310 agatttcctcggcagttaactaccgaggttttcctcggcagttaactg 31425357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 40358272 - 40358319
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||    
T  40358272 agatttcctcggcagttaactaccgaggttttcctcggcagttaactg 40358319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 51492152 - 51492093
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttc 75  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||| | |||||||||    
T  51492152 agatttcctcggcagttaactaccgaggttttcctaggcagttaactgcagccggatttc 51492093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 1042007 - 1041941
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||||||| |||| ||||||||||||||| |  |||||||| |||||||||||||||    
T  1042007 cggcagttaactaccgagatttttctcggcagttaactgcagtcggatttctaattcctcggcagtt 1041941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 16983594 - 16983544
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttc 75  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  16983594 cggcagttaactaccgaggtttttctcggcagttaactgtagccggatttc 16983544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 958595 - 958640
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccgg 70  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  958595 cggcagttaactaccgaggttttcctcggcagttaactgcaaccgg 958640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 6178111 - 6178160
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggattt 74  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  6178111 cggcagttaactaccgaggttttcctcggcagttaactgcagccggattt 6178160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 21018129 - 21018068
Alignment:
Q  2 ttttagaattatgaagatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||| ||| ||| |||| |||||||||||||||||||||||| ||||||||||||||    
T  21018129 ttttagaatgatgcagaattcctcggcagttaactaccgaggttttcttcggcagttaactg 21018068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 49094156 - 49094107
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggattt 74  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  49094156 cggcagttaactaccgaggttttcctcggcagttaactgcagccggattt 49094107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 16984156 - 16984212
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttc 75  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||| | |||||||||    
T  16984156 tttcctcggcagttaactatcgaggttttcctcggcagttaactgcagccggatttc 16984212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 26932663 - 26932619
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaact 62  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  26932663 atttcctcggcagttaactaccgaggttttcctcggcagttaact 26932619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 37563275 - 37563319
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  37563275 tttcctcggcagttaactaccgaggttttcctcggcagttaactg 37563319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 39773482 - 39773438
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  39773482 tttcctcggcagttaactaccgaggttttcctcggcagttaactg 39773438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 54634010 - 54634054
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  54634010 tttcctcggcagttaactaccgaggttttcctcggcagttaactg 54634054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 1089576 - 1089623
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  1089576 agatttcctcggcagttaactaccgaggttttcctcggcatttaactg 1089623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 3403900 - 3403853
Alignment:
Q  44 ttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||    
T  3403900 ttttcctcggcagttaactgcagccggatttcaaattcctcggcagtt 3403853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 49169089 - 49169136
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||    
T  49169089 agatttcctcggcagttaactaccgaggtattcctcggcagttaactg 49169136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 11494615 - 11494577
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  11494615 cggcagttaactaccgaggttttcctcggcagttaactg 11494577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 39590569 - 39590607
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  39590569 cggcagttaactaccgaggttttcctcggcagttaactg 39590607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 37022053 - 37022118
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattc 81  Q
    |||||| | |||||||||||| |||||||||||||||| ||||||||| | ||| |||||||||||    
T  37022053 agattttctcggcagttaactgccgaggttttcctcggtagttaactgcagccgaatttcaaattc 37022118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 41795357 - 41795406
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggattt 74  Q
    ||||||||||||| ||||||||||||||||||||||||| | ||||||||    
T  41795357 cggcagttaactaacgaggttttcctcggcagttaactgcagccggattt 41795406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 55793992 - 55793943
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggattt 74  Q
    |||||||||||| |||||||||||||||||||||||||| | ||||||||    
T  55793992 cggcagttaactcccgaggttttcctcggcagttaactgcagccggattt 55793943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 56138324 - 56138275
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggattt 74  Q
    |||||||||||||| |||||||||||||||||||||||| | ||||||||    
T  56138324 cggcagttaactactgaggttttcctcggcagttaactgcagccggattt 56138275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 20208580 - 20208544
Alignment:
Q  27 gcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||||||||||||||||||||||    
T  20208580 gcagttaactaccgaggttttcctcggcagttaactg 20208544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 67664 - 67625
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgt 64  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  67664 cggcagttaactaccgaggttttcctcgacagttaactgt 67625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 160
Target Start/End: Original strand, 28235649 - 28235700
Alignment:
Q  109 gtaaaatactcgtgtggcatagccttatgtaaagtgtaaacatcaattctct 160  Q
    ||||||||||||||||| | |||||||||||| ||||||||| |||||||||    
T  28235649 gtaaaatactcgtgtggtacagccttatgtaatgtgtaaacaacaattctct 28235700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 37015979 - 37015932
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||  |||||||||||||||| |||||||||||||||||||||    
T  37015979 agatttcctgggcagttaactaccgaagttttcctcggcagttaactg 37015932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 37880648 - 37880597
Alignment:
Q  109 gtaaaatactcgtgtggcatagccttatgtaaagtgtaaacatcaattctct 160  Q
    ||||| ||||||||||||| |||||||||||| ||||||||| |||||||||    
T  37880648 gtaaagtactcgtgtggcacagccttatgtaatgtgtaaacagcaattctct 37880597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 41800929 - 41800976
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| |||||||||||||||||||||||| ||||||| ||||||    
T  41800929 agatttcctcggcagttaactaccgaggttttcttcggcagctaactg 41800976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 44680117 - 44680078
Alignment:
Q  24 gcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  44680117 gcggcagttaactaccgaggatttcctcggcagttaactg 44680078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 955864 - 955826
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  955864 cggcagttaactaccgaggtttttctcggcagttaactg 955826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 28234488 - 28234450
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  28234488 cggcagttaactaccgaggttttcctcggcatttaactg 28234450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 29700303 - 29700341
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  29700303 cggcaattaactaccgaggttttcctcggcagttaactg 29700341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 30723259 - 30723213
Alignment:
Q  12 atgaagatttccgcggcagttaactaccgaggttttcctcggcagtt 58  Q
    |||||||||||| |||||||||||||||||||||||| || ||||||    
T  30723259 atgaagatttcctcggcagttaactaccgaggttttcttccgcagtt 30723213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 33383877 - 33383839
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  33383877 cggcagttaacttccgaggttttcctcggcagttaactg 33383839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 34151686 - 34151648
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  34151686 cggcagtttactaccgaggttttcctcggcagttaactg 34151648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 37563144 - 37563102
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaa 60  Q
    |||||| ||| ||||||||||||||||||||||||||||||||    
T  37563144 atttcctcggtagttaactaccgaggttttcctcggcagttaa 37563102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 37880655 - 37880705
Alignment:
Q  109 gtaaaatactcgtgtggcatagccttatgtaaagtgtaaacatcaattctc 159  Q
    ||||| ||||||||||||| |||||||||||| ||||||||| ||||||||    
T  37880655 gtaaagtactcgtgtggcacagccttatgtaatgtgtaaacaacaattctc 37880705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 37959721 - 37959759
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  37959721 cggcagttaactaccgatgttttcctcggcagttaactg 37959759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 40354677 - 40354639
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  40354677 cggcagttaactaccgaggttttcttcggcagttaactg 40354639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 41793436 - 41793398
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  41793436 cggcagttaactaccgaggttttcctcggcacttaactg 41793398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 48256569 - 48256635
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||| || ||||||||||||||||||||| | ||||||||  ||||| || ||||||    
T  48256569 cggcagttaactactgaagttttcctcggcagttaactgcagccggatttttaattcttctgcagtt 48256635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 49563912 - 49563874
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  49563912 cggccgttaactaccgaggttttcctcggcagttaactg 49563874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 50274812 - 50274766
Alignment:
Q  45 tttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||| | ||||||||| |||||||||||||||    
T  50274812 tttcctcggcagttaactgcagccggatttctaattcctcggcagtt 50274766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 52529281 - 52529247
Alignment:
Q  29 agttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||||||||||||||||||||    
T  52529281 agttaactaccgaggttttcctcggcagttaactg 52529247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 21018005 - 21018054
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggattt 74  Q
    |||||||||||| ||||||||||||||||||||||| || | ||||||||    
T  21018005 cggcagttaactgccgaggttttcctcggcagttaattgcagccggattt 21018054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 24414902 - 24414841
Alignment:
Q  30 gttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||||||| ||| ||||||||||| |||||  |||  |||||||||||||||    
T  24414902 gttaactaccgaggttttactcagcagttaactgcaaccgatttttgaattcctcggcagtt 24414841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 26792246 - 26792283
Alignment:
Q  26 ggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  26792246 ggcagttaactaccgagattttcctcggcagttaactg 26792283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 56565742 - 56565693
Alignment:
Q  109 gtaaaatactcgtgtggcatagccttatgtaaagtgtaaacatcaattct 158  Q
    ||||| ||||||||||||| |||||||||||| ||||||||| |||||||    
T  56565742 gtaaactactcgtgtggcacagccttatgtaatgtgtaaacagcaattct 56565693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 56565840 - 56565791
Alignment:
Q  14 gaagatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||| ||||| ||| |||||||| ||||||||||||||||||||||||||    
T  56565840 gaagttttcctcggtagttaactcccgaggttttcctcggcagttaactg 56565791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 9013909 - 9013873
Alignment:
Q  27 gcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||| |||||||||||||||||||||||||    
T  9013909 gcagttaactatcgaggttttcctcggcagttaactg 9013873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 21015817 - 21015773
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| |||||||||||||||||||||| |||| |||||||||||    
T  21015817 tttcctcggcagttaactaccgaggtttccctcagcagttaactg 21015773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 37395210 - 37395258
Alignment:
Q  43 gttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||| ||||||| | ||||||||||||||||||| |||||    
T  37395210 gttttcctcggcaattaactgcagccggatttcaaattcctcgacagtt 37395258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 38460504 - 38460460
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| |||||||||| ||||||||||||||||| ||||||||||    
T  38460504 tttcctcggcagttaattaccgaggttttcctcgacagttaactg 38460460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 44051087 - 44051131
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||||    
T  44051087 tttcctcggcagttaactaccgaggatttcctcgggagttaactg 44051131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 62
Target Start/End: Complemental strand, 72545 - 72510
Alignment:
Q  27 gcagttaactaccgaggttttcctcggcagttaact 62  Q
    |||||||||||||||||||||||||| |||||||||    
T  72545 gcagttaactaccgaggttttcctcgacagttaact 72510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 160
Target Start/End: Original strand, 3186152 - 3186203
Alignment:
Q  109 gtaaaatactcgtgtggcatagccttatgtaaagtgtaaacatcaattctct 160  Q
    ||||||||||||||||||| ||||||||  || ||||||||| |||||||||    
T  3186152 gtaaaatactcgtgtggcacagccttatcaaatgtgtaaacagcaattctct 3186203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 62
Target Start/End: Complemental strand, 8111455 - 8111420
Alignment:
Q  27 gcagttaactaccgaggttttcctcggcagttaact 62  Q
    ||||||||||||||||| ||||||||||||||||||    
T  8111455 gcagttaactaccgaggatttcctcggcagttaact 8111420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 9491280 - 9491327
Alignment:
Q  45 tttcctcggcagttaactgtaaccggatttcaaattcctcggcagttg 92  Q
    |||| |||||||||||||| | |||||||||||||||||| |||||||    
T  9491280 tttcttcggcagttaactgcagccggatttcaaattcctctgcagttg 9491327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 10423401 - 10423444
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaact 62  Q
    ||||| ||||||||||||||| ||| ||||||||||||||||||    
T  10423401 tttcctcggcagttaactacctaggatttcctcggcagttaact 10423444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 31421736 - 31421775
Alignment:
Q  24 gcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||| |||||||||||| |||||||||||||||||||    
T  31421736 gcggcagctaactaccgaggatttcctcggcagttaactg 31421775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 91
Target Start/End: Complemental strand, 37394297 - 37394254
Alignment:
Q  48 cctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||||| | ||||||||||||||||||| |||||    
T  37394297 cctcggcagttaactgcatccggatttcaaattcctcgacagtt 37394254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 49096319 - 49096354
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaa 60  Q
    ||||||||||||||||||||||||||||||| ||||    
T  49096319 cggcagttaactaccgaggttttcctcggcacttaa 49096354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 49572904 - 49572939
Alignment:
Q  28 cagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||||||||||||||||||||||||||||||    
T  49572904 cagtttactaccgaggttttcctcggcagttaactg 49572939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 4783718 - 4783680
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||| |||| |||||||||||||||||||||    
T  4783718 cggcagttaactgccgaagttttcctcggcagttaactg 4783680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 6175949 - 6175911
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  6175949 cggcagttaactaccgaggttttccttggcacttaactg 6175911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 11084008 - 11084046
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  11084008 cggcagttaactgccgaggttttcctcgggagttaactg 11084046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 21470975 - 21470937
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||| || ||||||||    
T  21470975 cggcagttaactaccgaggttttcctctgcggttaactg 21470937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 33409595 - 33409557
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  33409595 cggcagttaactgccgaggttttcctcgggagttaactg 33409557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 33410230 - 33410268
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  33410230 cggcagttaactgccgaggttttcctcgggagttaactg 33410268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 41933623 - 41933661
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  41933623 cggcagttaactaccgaggtttttctcggtagttaactg 41933661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 44561331 - 44561369
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||| |||||||||| |||||||||    
T  44561331 cggcagttaactaccgagattttcctcggtagttaactg 44561369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 44795044 - 44794994
Alignment:
Q  109 gtaaaatactcgtgtggcatagccttatgtaaagtgtaaacatcaattctc 159  Q
    ||||| ||||||||| ||| ||||| |||||||||||||||| ||||||||    
T  44795044 gtaaagtactcgtgtagcacagcctcatgtaaagtgtaaacagcaattctc 44794994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 56566639 - 56566689
Alignment:
Q  109 gtaaaatactcgtgtggcatagccttatgtaaagtgtaaacatcaattctc 159  Q
    ||||| |||||||||| || |||||||||||| ||||||||| ||||||||    
T  56566639 gtaaagtactcgtgtgacacagccttatgtaacgtgtaaacaacaattctc 56566689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 63
Target Start/End: Original strand, 3408250 - 3408279
Alignment:
Q  34 actaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||||||    
T  3408250 actaccgaggttttcctcggcagttaactg 3408279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 16473768 - 16473817
Alignment:
Q  109 gtaaaatactcgtgtggcatagccttatgtaaagtgtaaacatcaattct 158  Q
    ||||| ||||||||||||| | |||||||||| ||||||||| |||||||    
T  16473768 gtaaagtactcgtgtggcacaaccttatgtaatgtgtaaacagcaattct 16473817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 30704051 - 30704084
Alignment:
Q  27 gcagttaactaccgaggttttcctcggcagttaa 60  Q
    ||||||||||||| ||||||||||||||||||||    
T  30704051 gcagttaactaccaaggttttcctcggcagttaa 30704084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 38464770 - 38464826
Alignment:
Q  28 cagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcg 85  Q
    ||||||||||||||||||||||| | |||||||||| | |||| |||| |||||||||    
T  38464770 cagttaactaccgaggttttccttgacagttaactgcagccgg-tttcgaattcctcg 38464826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 49889753 - 49889705
Alignment:
Q  26 ggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttc 75  Q
    ||||||||||| ||||| |||||||||||||||||||| |||| ||||||    
T  49889753 ggcagttaactcccgag-ttttcctcggcagttaactgcaaccagatttc 49889705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 23221665 - 23221709
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||| |||| |||||||| |||||||||||||||||||||    
T  23221665 tttcctcggtagtttactaccgaagttttcctcggcagttaactg 23221709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 53
Target Start/End: Original strand, 31242786 - 31242814
Alignment:
Q  25 cggcagttaactaccgaggttttcctcgg 53  Q
    |||||||||||||||||||||||||||||    
T  31242786 cggcagttaactaccgaggttttcctcgg 31242814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 34503787 - 34503743
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||||||||||||||||| ||||| ||||| |||||||||    
T  34503787 tttcctcggcagttaactaccgaagtttttctcggtagttaactg 34503743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 36480535 - 36480579
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||| ||||||||||||| ||||||||||| |||||||||    
T  36480535 tttcctcggtagttaactaccgaagttttcctcggtagttaactg 36480579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 50278817 - 50278865
Alignment:
Q  43 gttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||||| | ||||||||| ||||| ||| |||||    
T  50278817 gttttcctcggcagttaactgcagccggatttctaattcatcgacagtt 50278865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 63
Target Start/End: Complemental strand, 54633878 - 54633846
Alignment:
Q  31 ttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||| |||||||||||||||||||||    
T  54633878 ttaactaccgaagttttcctcggcagttaactg 54633846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 4e-25; HSPs: 86)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 52802202 - 52802136
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  52802202 cggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagtt 52802136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 6562155 - 6562228
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||    
T  6562155 atttcctcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaattcctcggcagtt 6562228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 44470006 - 44470078
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||| |||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  44470006 tttcctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagtt 44470078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 15047360 - 15047288
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||| |||||||||||||||||||  |||||||||||||||||| | |||||||||||||||||||||||||    
T  15047360 tttcctcggcagttaactaccgaggaattcctcggcagttaactgcagccggatttcaaattcctcggcagtt 15047288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 9711647 - 9711718
Alignment:
Q  20 ttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||| |||||||||||| ||||||||||||||||||||||||||  |||||||||| |||||||||||||||    
T  9711647 ttcctcggcagttaactcccgaggttttcctcggcagttaactgcgaccggatttctaattcctcggcagtt 9711718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 6557987 - 6557921
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||||||| |||||||||||||||||||| | ||| |||||||||||||||||||||    
T  6557987 cggcagttaactaccgagattttcctcggcagttaactgcagccgaatttcaaattcctcggcagtt 6557921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 23359344 - 23359413
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggca 88  Q
    ||||| |||||||| |||||||||||||||||||| ||||||||| | ||||||||||||||||||||||    
T  23359344 tttcctcggcagtttactaccgaggttttcctcggtagttaactgcagccggatttcaaattcctcggca 23359413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 48751405 - 48751477
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||| | ||||||||  |||||||||||||||    
T  48751405 tttcctcggcagttaactaccgaggttttcctcggcaattaactgcagccggatttttaattcctcggcagtt 48751477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 44336321 - 44336255
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||||||||||||||||||||||| | ||| ||||| ||||||||| |||||    
T  44336321 cggcagttaactaccgaggttttcctcggcagttaactgcagccgaatttctaattcctcgacagtt 44336255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 23276111 - 23276175
Alignment:
Q  27 gcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||  |||||||| ||||||    
T  23276111 gcagttaactatcgaggttttcctcggcagttaactgtagccggatttttaattcctcagcagtt 23276175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 3728816 - 3728769
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||    
T  3728816 agatttcctcggcagttaactaccgaggttttcctcggcagttaactg 3728769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 8548661 - 8548708
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||    
T  8548661 agatttcctcggcagttaactaccgaggttttcctcggcagttaactg 8548708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 11183255 - 11183192
Alignment:
Q  28 cagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||  |||||||| ||||||    
T  11183255 cagttaactaccgaggttttcctcggcagttaactgcagccggatttttaattcctcagcagtt 11183192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 51289961 - 51290020
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctc 84  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||  ||||||||    
T  51289961 cggcagctaactaccgaggttttcctcggcagttaactgcaaccggatttttaattcctc 51290020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 26633599 - 26633533
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||  ||||| |||| ||||    
T  26633599 cggcagttaactaccgaggttttcctcggcagttaactgcaaccggtttttgaattcttcggtagtt 26633533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 3944053 - 3944008
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  3944053 atttcctcggcagttaactaccgaggttttcctcggcagttaactg 3944008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 3993837 - 3993882
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  3993837 atttcctcggcagttaactaccgaggttttcctcggcagttaactg 3993882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 13636123 - 13636172
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggattt 74  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  13636123 cggcagttaactaccgaggttttcctcggcagttaactgcagccggattt 13636172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 19161970 - 19161914
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttc 75  Q
    ||||| |||||||||||| |||||||||||||||||||||||||| | |||||||||    
T  19161970 tttcctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttc 19161914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 15051340 - 15051387
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||    
T  15051340 agatttcgccggcagttaactaccgaggttttcctcggcagttaactg 15051387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 26879287 - 26879334
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||    
T  26879287 agatttccttggcagttaactaccgaggttttcctcggcagttaactg 26879334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 29622416 - 29622463
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  29622416 agatttcctcggcagttaactaccgaggttttcctcggcaattaactg 29622463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 31783706 - 31783753
Alignment:
Q  15 aagatttccgcggcagttaactaccgaggttttcctcggcagttaact 62  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||    
T  31783706 aagatttcctcggcagttaactcccgaggttttcctcggcagttaact 31783753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 41453891 - 41453844
Alignment:
Q  44 ttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||    
T  41453891 ttttcctcggcagttaactgcagccggatttcaaattcctcggcagtt 41453844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 41804037 - 41804100
Alignment:
Q  28 cagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||||||||||||||||||||||||| |  ||| |||  |||||||||||||||    
T  41804037 cagttaactaccgaggttttcctcggcagttaactgcagtcggtttttgaattcctcggcagtt 41804100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 49927517 - 49927580
Alignment:
Q  28 cagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||||||||| |||||||||||||| || |||| ||| |||||| |||||||||    
T  49927517 cagttaactaccgaggtttttctcggcagttaactatagccggtttttaaattcttcggcagtt 49927580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 22345332 - 22345267
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||| |||  |||||||||||||| | |||| ||||||||||||||||||||    
T  22345332 cggcagttaactaccgaggattttttcggcagttaactgcagccgg-tttcaaattcctcggcagtt 22345267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 36072441 - 36072403
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  36072441 cggcagttaactaccgaggttttcctcggcagttaactg 36072403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 38690009 - 38689944
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcg 85  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| | |||| |||| |||||||||    
T  38690009 tttcctcggcagttaactaccgaggttttccttggcagttaactgcagccgg-tttcgaattcctcg 38689944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 46141854 - 46141788
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||| ||||||||||||||||||||| | |||| | |  |||||||||||||||    
T  46141854 cggcagttaactaccgatgttttcctcggcagttaactgcagccggttattgaattcctcggcagtt 46141788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 8460098 - 8460158
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcgg 86  Q
    |||||||||||||||||| ||||||| |||||||||||| | || |||||||||||||||||    
T  8460098 cggcagttaactaccgagattttccttggcagttaactgcagcc-gatttcaaattcctcgg 8460158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 13633941 - 13633904
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaact 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13633941 cggcagttaactaccgaggttttcctcggcagttaact 13633904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 19159695 - 19159646
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggattt 74  Q
    |||||||||||||||||||||||||| |||||||||||| | ||||||||    
T  19159695 cggcagttaactaccgaggttttccttggcagttaactgcagccggattt 19159646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 20353929 - 20353974
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||    
T  20353929 atttcctcggcagttaactaccgaagttttcctcggcagttaactg 20353974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 38771708 - 38771663
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||    
T  38771708 atttcctcggcagttaactcccgaggttttcctcggcagttaactg 38771663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 9710656 - 9710600
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttc 75  Q
    ||||| |||||||||||| |||| ||||||||||||||||||||| | |||||||||    
T  9710656 tttcctcggcagttaactcccgaagttttcctcggcagttaactgcagccggatttc 9710600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 29356685 - 29356733
Alignment:
Q  44 ttttcctcggcagttaactgtaaccggatttcaaattcctcggcagttg 92  Q
    |||||||||||||||||||| | | ||||||||||||||||||||||||    
T  29356685 ttttcctcggcagttaactgcagctggatttcaaattcctcggcagttg 29356733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 30910022 - 30910070
Alignment:
Q  43 gttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||||| | ||||||||||||||||||| |||||    
T  30910022 gttttcctcggcagttaactgcagccggatttcaaattcctcgacagtt 30910070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 38119614 - 38119650
Alignment:
Q  27 gcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||||||||||||||||||||||    
T  38119614 gcagttaactaccgaggttttcctcggcagttaactg 38119650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 51271586 - 51271642
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttc 75  Q
    ||||| ||||||||||| ||||||||||||||||||| ||||||| | |||||||||    
T  51271586 tttccccggcagttaaccaccgaggttttcctcggcaattaactgcagccggatttc 51271642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 2425677 - 2425736
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttc 75  Q
    |||||||| |||||||||||||||||| || ||||| ||||||||||| | |||||||||    
T  2425677 agatttcctcggcagttaactaccgagattctcctcagcagttaactgcagccggatttc 2425736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 20349510 - 20349463
Alignment:
Q  44 ttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||||||||| | |||||||||||||||||||| ||||    
T  20349510 ttttcctcggcagttaactgcagccggatttcaaattcctcggtagtt 20349463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 22524207 - 22524160
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||| | ||||||||||||||||||||||||||||| |||||||||    
T  22524207 agattttctcggcagttaactaccgaggttttcctcgggagttaactg 22524160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 471097 - 471135
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  471097 cggcagttaactcccgaggttttcctcggcagttaactg 471135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 18975121 - 18975187
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||| ||||||||| ||||||||||| |||| | | | |||||||||| |||||    
T  18975121 cggcagttaactaccgaagttttcctctgcagttaactgcaaccagttattaaattcctcgacagtt 18975187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 19054251 - 19054289
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  19054251 cggcagttaactaccgaggttttccttggcagttaactg 19054289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 29352313 - 29352271
Alignment:
Q  43 gttttcctcggcagttaactgtaaccggatttcaaattcctcg 85  Q
    ||||||||||||||||||||| | |||||||||||||||||||    
T  29352313 gttttcctcggcagttaactggagccggatttcaaattcctcg 29352271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 29425331 - 29425381
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccg 69  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||||| |||||    
T  29425331 tttcctcggcagttaactaccgaagttttcctcggtagttaactgcaaccg 29425381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 35258873 - 35258939
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||| | |||||||||||||||  |||||||| | ||||||||  |||||||||||||||    
T  35258873 cggcagttaaccatcgaggttttcctcgggtgttaactgcagccggatttttaattcctcggcagtt 35258939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 44598901 - 44598955
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatt 73  Q
    ||||| |||||||||||| |||| ||||||||||||||||||||| | |||||||    
T  44598901 tttcctcggcagttaactcccgaagttttcctcggcagttaactgcagccggatt 44598955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 46973275 - 46973210
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||  |||||||||||||||||||||||| | |||| |||  |||||||||||||||    
T  46973275 cggcagttaactat-gaggttttcctcggcagttaactgcagccggtttttgaattcctcggcagtt 46973210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 19159557 - 19159614
Alignment:
Q  1 tttttagaattatgaagatttccgcggcagttaactaccgaggttttcctcggcagtt 58  Q
    |||||||||| || ||||||||| |||||| ||||||||||||||||| |||| ||||    
T  19159557 tttttagaatgataaagatttcctcggcagataactaccgaggttttcttcggtagtt 19159614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 36076559 - 36076620
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcgg 86  Q
    |||||||| |||| ||||||||||||||||||||||||| | |||| |||  ||||||||||    
T  36076559 cggcagtttactagcgaggttttcctcggcagttaactgcagccggtttttgaattcctcgg 36076620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 50117840 - 50117885
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||| ||||| |||||||||||| ||||||||||||||||||||    
T  50117840 atttcctcggcatttaactaccgagattttcctcggcagttaactg 50117885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 1656084 - 1656128
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||||||||||||||||||||||| |||| ||||||||||    
T  1656084 tttcctcggcagttaactaccgaggtttttctcgacagttaactg 1656128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 3941145 - 3941189
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||||    
T  3941145 tttcctcggcagttaactaccgaagttttcctcggtagttaactg 3941189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 19499115 - 19499179
Alignment:
Q  27 gcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||| || |||||||||||||||||||||||| | ||| |||| ||||| ||| ||||||    
T  19499115 gcagttaacgactgaggttttcctcggcagttaactgcagccgaattttaaatttctcagcagtt 19499179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 19521687 - 19521623
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcct 83  Q
    ||||| |||||||||||||||||| || |||| ||||| |||||| | ||||||||| |||||||    
T  19521687 tttcctcggcagttaactaccgagattatccttggcaggtaactgcagccggatttctaattcct 19521623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 19928806 - 19928850
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||||||||||||||||||||||| ||||||| |||||||    
T  19928806 tttcctcggcagttaactaccgaggttttactcggcacttaactg 19928850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 22346036 - 22346083
Alignment:
Q  43 gttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||||| | |||| ||||||||||||||||||||    
T  22346036 gttttcctcggcagttaactgcagccgg-tttcaaattcctcggcagtt 22346083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 29424458 - 29424414
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||||    
T  29424458 tttcctcggcagttaactaccgaagttttcctcggtagttaactg 29424414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 38127530 - 38127494
Alignment:
Q  27 gcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||| |||||||||||||||||||||    
T  38127530 gcagttaactaccgaagttttcctcggcagttaactg 38127494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 46217313 - 46217357
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||||    
T  46217313 tttcctcggcagttaactaccgaagttttcctcggtagttaactg 46217357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 7981140 - 7981175
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaa 60  Q
    |||| |||||||||||||||||||||||||||||||    
T  7981140 cggcggttaactaccgaggttttcctcggcagttaa 7981175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 91
Target Start/End: Complemental strand, 30905820 - 30905777
Alignment:
Q  48 cctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||||| | |||||||||||||| ||||||||||    
T  30905820 cctcggcagttaactgcagccggatttcaaatttctcggcagtt 30905777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 45943721 - 45943764
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaact 62  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||||    
T  45943721 tttcctcggcagttaactaccgaagttttcctcggtagttaact 45943764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 50113379 - 50113320
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctc 84  Q
    |||||||||||||||||| |||||||||||| ||||||  | ||| | ||||||||||||    
T  50113379 cggcagttaactaccgagattttcctcggcaattaactacagccgaaattcaaattcctc 50113320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 16270026 - 16270064
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  16270026 cggcagttaactgccgaggttttcttcggcagttaactg 16270064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 21141056 - 21141094
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||| ||||||| |||||||||||||||||||    
T  21141056 cggcagttaacgaccgaggatttcctcggcagttaactg 21141094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 26606876 - 26606830
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgta 65  Q
    ||||| |||||||||||| |||| ||||||||||| |||||||||||    
T  26606876 tttcctcggcagttaactgccgaagttttcctcggtagttaactgta 26606830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 29438021 - 29438059
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  29438021 cggcagttaattaccgaggttttcctcggtagttaactg 29438059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 31780013 - 31779963
Alignment:
Q  109 gtaaaatactcgtgtggcatagccttatgtaaagtgtaaacatcaattctc 159  Q
    ||||| ||||| ||||||| |||||||||||| ||||||||| ||||||||    
T  31780013 gtaaagtactcatgtggcacagccttatgtaatgtgtaaacaacaattctc 31779963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 49924928 - 49924862
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||| |||| | ||||||||||||||||||||| |||| |||  ||||  |||||||||    
T  49924928 cggcagttaactcccgatgatttcctcggcagttaactgtagccggtttttgaatttttcggcagtt 49924862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 98011 - 98060
Alignment:
Q  109 gtaaaatactcgtgtggcatagccttatgtaaagtgtaaacatcaattct 158  Q
    ||||||||||||||||||| ||||||||  || ||||||||| |||||||    
T  98011 gtaaaatactcgtgtggcacagccttatcaaatgtgtaaacaacaattct 98060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 64
Target Start/End: Complemental strand, 45829170 - 45829133
Alignment:
Q  27 gcagttaactaccgaggttttcctcggcagttaactgt 64  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  45829170 gcagttaactaccaaggttttcctcggcagtaaactgt 45829133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 45977665 - 45977710
Alignment:
Q  17 gatttccgcggcagttaactaccgaggttttcctcggcagttaact 62  Q
    ||||||| ||||||||||||| ||| ||||||||| ||||||||||    
T  45977665 gatttcctcggcagttaactatcgaagttttcctctgcagttaact 45977710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 46043584 - 46043543
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaa 60  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||    
T  46043584 tttcctcggcagttaactaccgaagttttcctcggtagttaa 46043543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 50617283 - 50617215
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccgg--atttcaaattcctcg 85  Q
    ||||| |||||||||||| ||||||||||||| | |||||||||| | ||||  ||||| |||||||||    
T  50617283 tttcctcggcagttaactcccgaggttttccttgacagttaactgcagccggaaatttctaattcctcg 50617215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 11197466 - 11197430
Alignment:
Q  27 gcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  11197466 gcagttaactcccgagattttcctcggcagttaactg 11197430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 22528611 - 22528651
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagtt 58  Q
    |||||| ||||||||||||| |||||||||||||| |||||    
T  22528611 atttcctcggcagttaactatcgaggttttcctcgacagtt 22528651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 29765548 - 29765580
Alignment:
Q  43 gttttcctcggcagttaactgtaaccggatttc 75  Q
    ||||||||||||||||||||| |||||||||||    
T  29765548 gttttcctcggcagttaactgcaaccggatttc 29765580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 31945856 - 31945900
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| |||||||||||||||||||  |||||||| |||||||||    
T  31945856 tttcctcggcagttaactaccgaggaattcctcggtagttaactg 31945900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 46216476 - 46216432
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||||||||||||||||| ||||||||||  |||||||||    
T  46216476 tttcctcggcagttaactaccgaagttttcctcgatagttaactg 46216432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 46886383 - 46886438
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttc 75  Q
    ||||| ||||||||||||||||| ||||||||||||| ||||||  | |||||||||    
T  46886383 tttcctcggcagttaactaccga-gttttcctcggcacttaactacagccggatttc 46886438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 47652772 - 47652728
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||| |||||||| |||| |||||||||||||||||||||    
T  47652772 tttcctcgggagttaactgccgaagttttcctcggcagttaactg 47652728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 52805552 - 52805600
Alignment:
Q  43 gttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||| ||||||  | ||||||||||||||| |||||||||    
T  52805552 gttttcctcggcaattaactacagccggatttcaaattcgtcggcagtt 52805600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 17345 - 17418
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||    
T  17345 atttcctcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaattcctcggcagtt 17418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 6e-24; HSPs: 79)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 35962385 - 35962313
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  35962385 tttcctcggcagttaactcccgaggttttcctcggcagttaactgtagccggatttcaaattcctcgacagtt 35962313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 160
Target Start/End: Complemental strand, 43262500 - 43262358
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagttgtcgaggaggnnnnnnngtaaaatac 117  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||| | | ||||||||||| |||||| ||||| ||||| ||       || |  |||    
T  43262500 atttcctcggcagttaactaccgaagttttcctcggcagttaactgcagctggatttcaaatacctcggaagttgccgagggggtaaaaacgtcatttac 43262401  T
Q  118 tcgtgtggcatagccttatgtaaagtgtaaacatcaattctct 160  Q
    |||||||||| |||||||||||| |||  |||| |||||||||    
T  43262400 tcgtgtggcacagccttatgtaatgtgagaacaacaattctct 43262358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 1114815 - 1114749
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||| ||||||||||||||||||| | |||||||||||||| ||||||||||    
T  1114815 cggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaatttctcggcagtt 1114749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 159
Target Start/End: Complemental strand, 41743944 - 41743824
Alignment:
Q  43 gttttcctcggcagttaactgtaaccggatttcaaattcctcggcagt----tgtcgaggaggnnnnnnngtaaaatactcgtgtggcatagccttatgt 138  Q
    |||||| |||||||||||||| | ||||||||||||||||||||||||    | |||||| ||       ||||||||||||||||| | | ||||||||    
T  41743944 gttttcttcggcagttaactgcagccggatttcaaattcctcggcagttaactatcgagggggcaaaagagtaaaatactcgtgtggtacaaccttatgt 41743845  T
Q  139 aaagtgtaaacatcaattctc 159  Q
    |||||||||||| ||||||||    
T  41743844 aaagtgtaaacaacaattctc 41743824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 184512 - 184455
Alignment:
Q  1 tttttagaattatgaagatttccgcggcagttaactaccgaggttttcctcggcagtt 58  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||    
T  184512 tttttagaatgatgaagatttcctcggcagttaactaccgaggttttcttcggcagtt 184455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 22014420 - 22014364
Alignment:
Q  2 ttttagaattatgaagatttccgcggcagttaactaccgaggttttcctcggcagtt 58  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||    
T  22014420 ttttagaatgatgaagatttcctcggcagttaactaccgaggttttcttcggcagtt 22014364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 22550860 - 22550916
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttc 75  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  22550860 tttcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttc 22550916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 156
Target Start/End: Original strand, 20549251 - 20549368
Alignment:
Q  43 gttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt----gtcgaggaggnnnnnnngtaaaatactcgtgtggcatagccttatgt 138  Q
    ||||||||||| ||||||||| | ||| |||||||||||||||||||||    | ||||| ||       ||||||||||||||||||| | ||||||||    
T  20549251 gttttcctcggtagttaactgcagccgaatttcaaattcctcggcagttaactgccgagggggcaaaagagtaaaatactcgtgtggcacaaccttatgt 20549350  T
Q  139 aaagtgtaaacatcaatt 156  Q
    |||||||||||| |||||    
T  20549351 aaagtgtaaacaacaatt 20549368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 26663025 - 26663072
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||    
T  26663025 agatttcctcggcagttaactaccgaggttttcctcggcagttaactg 26663072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 39601785 - 39601726
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttc 75  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||| | |||||||||    
T  39601785 agatttcctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttc 39601726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 39458 - 39408
Alignment:
Q  109 gtaaaatactcgtgtggcatagccttatgtaaagtgtaaacatcaattctc 159  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  39458 gtaaaatactcgtgtggcacagccttatgtaaagtgtaaacagcaattctc 39408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 2146958 - 2147023
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||||||||||||||||||||||| |||| | |||| ||||||||||| ||||||||    
T  2146958 cggcagttaactaccgaggttttcctcggcagtttactgcagccgg-tttcaaattccccggcagtt 2147023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 26451552 - 26451486
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||||||||||||||||||||||  | ||| ||||| |||||||| ||||||    
T  26451552 cggcagttaactaccgaggttttcctcggcagttaactacagccgaatttctaattcctcagcagtt 26451486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 42602532 - 42602466
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||||||||||||||||||||||| | |||| |||  ||||| |||||||||    
T  42602532 cggcagttaactaccgaggttttcctcggcagttaactgcatccggtttttgaattcttcggcagtt 42602466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 8419483 - 8419438
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  8419483 atttcctcggcagttaactaccgaggttttcctcggcagttaactg 8419438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 32375730 - 32375685
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  32375730 atttcctcggcagttaactaccgaggttttcctcggcagttaactg 32375685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 36677888 - 36677831
Alignment:
Q  1 tttttagaattatgaagatttccgcggcagttaactaccgaggttttcctcggcagtt 58  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||| ||| |||||    
T  36677888 tttttagaatgatgaagatttcctcggcagttaactaccgaggttttcttcgccagtt 36677831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 38872932 - 38872997
Alignment:
Q  26 ggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||| |||||||||||||||||||||||||||| | |||| ||| ||||||||||| ||||    
T  38872932 ggcagttaattaccgaggttttcctcggcagttaactgcagccggtttttaaattcctcggtagtt 38872997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 184547 - 184591
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  184547 tttcctcggcagttaactaccgaggttttcctcggcagttaactg 184591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 41016492 - 41016448
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  41016492 tttcctcggcagttaactaccgaggttttcctcggcagttaactg 41016448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 44052231 - 44052290
Alignment:
Q  29 agttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggca 88  Q
    ||||||||||||||||||||||||| || |||||| | ||||||| ||||||||||||||    
T  44052231 agttaactaccgaggttttcctcggtaggtaactgcagccggattgcaaattcctcggca 44052290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 18205858 - 18205792
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||||||||||||||| |||||||||||| | |||| |||  ||||| |||||||||    
T  18205858 cggcagttaactaccgaggttttccttggcagttaactgcagccggtttttgaattcttcggcagtt 18205792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 34366992 - 34366934
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggattt 74  Q
    |||||||  ||||||||||||||||||||||||||||| ||||||||| | ||||||||    
T  34366992 agatttcatcggcagttaactaccgaggttttcctcggaagttaactgcagccggattt 34366934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 40077251 - 40077289
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  40077251 cggcagttaactaccgaggttttcctcggcagttaactg 40077289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 7344551 - 7344596
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||    
T  7344551 atttcctcggcagttaactcccgaggttttcctcggcagttaactg 7344596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 17924277 - 17924322
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||    
T  17924277 atttcctcggcagttaactaccgaggtttttctcggcagttaactg 17924322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 22014325 - 22014280
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||    
T  22014325 atttcctcggtagttaactaccgaggttttcctcggcagttaactg 22014280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 36677931 - 36677968
Alignment:
Q  26 ggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36677931 ggcagttaactaccgaggttttcctcggcagttaactg 36677968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 45454457 - 45454412
Alignment:
Q  46 ttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||||||| | |||||||||||||||||||||||||    
T  45454457 ttcctcggcagttaactgcatccggatttcaaattcctcggcagtt 45454412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 15030962 - 15030918
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||    
T  15030962 tttcctcggcagttaactcccgaggttttcctcggcagttaactg 15030918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 21406345 - 21406273
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||||| | |||| ||   |||||||||||||||    
T  21406345 tttcctcggcagttaactaccgaagttttcctcggtagttaactgcagccggtttatgaattcctcggcagtt 21406273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 21800837 - 21800765
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||||| | |||| ||   |||||||||||||||    
T  21800837 tttcctcggcagttaactaccgaagttttcctcggtagttaactgcagccggtttatgaattcctcggcagtt 21800765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 23923976 - 23923928
Alignment:
Q  112 aaatactcgtgtggcatagccttatgtaaagtgtaaacatcaattctct 160  Q
    |||||||||||||||| |||||||||||||||||||||| || ||||||    
T  23923976 aaatactcgtgtggcagagccttatgtaaagtgtaaacagcagttctct 23923928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 45066356 - 45066400
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||    
T  45066356 tttcctcggcagttaattaccgaggttttcctcggcagttaactg 45066400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 22577737 - 22577694
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaacc 68  Q
    |||||||||||||||||||||||||||| |||||||||| ||||    
T  22577737 cggcagttaactaccgaggttttcctcgacagttaactgcaacc 22577694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 35966753 - 35966816
Alignment:
Q  28 cagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||||| |||| ||| || ||||||| |  ||||||||||||||||||||||||    
T  35966753 cagttaactaccgaggatttcttcgacaattaactgcagtcggatttcaaattcctcggcagtt 35966816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 39537 - 39495
Alignment:
Q  43 gttttcctcggcagttaactgtaaccggatttcaaattcctcg 85  Q
    ||||||||||||||||||||| | |||||||||||||||||||    
T  39537 gttttcctcggcagttaactgcagccggatttcaaattcctcg 39495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 483888 - 483850
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  483888 cggcagttaactaccgaggttttcctcggcacttaactg 483850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 18438706 - 18438668
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  18438706 cggcagttaactcccgaggttttcctcggcagttaactg 18438668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 22519563 - 22519601
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  22519563 cggcagttaactaccgaggttttcctcggcacttaactg 22519601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 23018766 - 23018720
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaact 62  Q
    |||||||| |||||||||||||| ||||||||||| |||||||||||    
T  23018766 agatttcctcggcagttaactactgaggttttccttggcagttaact 23018720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 109 - 147
Target Start/End: Original strand, 31960105 - 31960143
Alignment:
Q  109 gtaaaatactcgtgtggcatagccttatgtaaagtgtaa 147  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  31960105 gtaaaatactcgtgtggcacagccttatgtaaagtgtaa 31960143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 32383206 - 32383244
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  32383206 cggcagttaactaccgaggttttcctcggtagttaactg 32383244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 32437161 - 32437199
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  32437161 cggcagttaactaccgaggttttcctcggtagttaactg 32437199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 34823017 - 34823083
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||||||||||||||||| || ||||||| | ||| ||||  ||||||||| |||||    
T  34823017 cggcagttaactaccgaggttttcctcgacaattaactgcagccgtatttttaattcctcgacagtt 34823083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 41855436 - 41855402
Alignment:
Q  29 agttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||||||||||||||||||||    
T  41855436 agttaactaccgaggttttcctcggcagttaactg 41855402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 45409856 - 45409806
Alignment:
Q  109 gtaaaatactcgtgtggcatagccttatgtaaagtgtaaacatcaattctc 159  Q
    ||||| ||||||||||||| |||||||||||| ||||||||| ||||||||    
T  45409856 gtaaagtactcgtgtggcacagccttatgtaatgtgtaaacagcaattctc 45409806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 39751132 - 39751080
Alignment:
Q  38 ccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||||||||||||||| | |||| |||||||||| |||||||||    
T  39751132 ccgaggttttcctcggcagttaactgcagccgg-tttcaaattcatcggcagtt 39751080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 39939217 - 39939266
Alignment:
Q  26 ggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttc 75  Q
    |||||||||||||| |||||||||| |||||||||||| | |||||||||    
T  39939217 ggcagttaactacctaggttttccttggcagttaactgcagccggatttc 39939266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 184416 - 184376
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagtt 58  Q
    |||||| ||| ||||||||||||||||||||||||||||||    
T  184416 atttcctcggtagttaactaccgaggttttcctcggcagtt 184376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 1116207 - 1116255
Alignment:
Q  43 gttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||| ||||||||||||||| | ||||||||||||||||||| |||||    
T  1116207 gtttttctcggcagttaactgcagccggatttcaaattcctcgacagtt 1116255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 7168152 - 7168096
Alignment:
Q  33 aactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcag 89  Q
    ||||||||||||||||||||||||||||||| | |||| |||  ||||| |||||||    
T  7168152 aactaccgaggttttcctcggcagttaactgcagccggtttttgaattcttcggcag 7168096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 28694507 - 28694559
Alignment:
Q  109 gtaaaatactcgtgtggcatagccttatgtaaagtgtaaacatcaattctctt 161  Q
    ||||||||||||||||||| | |||||||||| |||| |||| ||||||||||    
T  28694507 gtaaaatactcgtgtggcacaaccttatgtaatgtgttaacagcaattctctt 28694559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 1056193 - 1056240
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| | |||||||||| || |||||||||||||||||||||||    
T  1056193 agatttcctcagcagttaactcccaaggttttcctcggcagttaactg 1056240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 15033148 - 15033183
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaa 60  Q
    |||||||||||||||||||||| |||||||||||||    
T  15033148 cggcagttaactaccgaggtttccctcggcagttaa 15033183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 26659484 - 26659523
Alignment:
Q  24 gcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||| |||||||||||| |||||||||||||||||||    
T  26659484 gcggcagctaactaccgaggatttcctcggcagttaactg 26659523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 28646252 - 28646311
Alignment:
Q  29 agttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggca 88  Q
    |||||||| |||| ||||||||||||||||||||| | |||  ||| |||||||||||||    
T  28646252 agttaactgccgaagttttcctcggcagttaactgcagccgatttttaaattcctcggca 28646311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 28650836 - 28650895
Alignment:
Q  29 agttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggca 88  Q
    |||||||| |||| ||||||||||||||||||||| | |||  ||| |||||||||||||    
T  28650836 agttaactgccgaagttttcctcggcagttaactgcagccgatttttaaattcctcggca 28650895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 34892805 - 34892848
Alignment:
Q  20 ttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||| |||||||||||| |||| |||||||||||||||||||||    
T  34892805 ttcctcggcagttaactgccgaagttttcctcggcagttaactg 34892848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 41250064 - 41250111
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| ||||||||||| | ||||||||||||||||||| |||||    
T  41250064 agatttcctcggcagttaaccatcgaggttttcctcggcagtaaactg 41250111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 546424 - 546458
Alignment:
Q  27 gcagttaactaccgaggttttcctcggcagttaac 61  Q
    |||||||||| ||||||||||||||||||||||||    
T  546424 gcagttaactcccgaggttttcctcggcagttaac 546458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 36677792 - 36677746
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcct-cggcagttaactg 63  Q
    |||||| ||| |||||||||||||||||||||| |||||||||||||    
T  36677792 atttcctcggtagttaactaccgaggttttcctccggcagttaactg 36677746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 40039198 - 40039160
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  40039198 cggcagttaacttccgaggttttcctcggtagttaactg 40039160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 40039685 - 40039723
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  40039685 cggcagttaactatcgaggttttcctcggtagttaactg 40039723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 40740978 - 40740940
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||| |||| |||||||||||||||||||||    
T  40740978 cggcagttaactgccgaagttttcctcggcagttaactg 40740940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 41274664 - 41274626
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  41274664 cggcagttaactaccgagattttcctcggcaattaactg 41274626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 42605235 - 42605273
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  42605235 cggcagttaactaccgatgttttcatcggcagttaactg 42605273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 4866467 - 4866504
Alignment:
Q  27 gcagttaactaccgaggttttcctcggcagttaactgt 64  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  4866467 gcagttaactaccgagtttttcctcggtagttaactgt 4866504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 18441442 - 18441479
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaact 62  Q
    |||||||||||| |||||||||| ||||||||||||||    
T  18441442 cggcagttaactgccgaggtttttctcggcagttaact 18441479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 41238917 - 41238872
Alignment:
Q  53 gcagttaactgtaaccggatttcaaattcctcggcagttgtcgagg 98  Q
    ||||||||||| | ||||||||  ||||||||||||||||||||||    
T  41238917 gcagttaactgcagccggatttttaattcctcggcagttgtcgagg 41238872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 486090 - 486054
Alignment:
Q  27 gcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||||| |||||| |||||||||    
T  486090 gcagttaactaccgaggtttacctcggtagttaactg 486054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 914795 - 914751
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||| |||| |||||||| |||||||||||||||||||||    
T  914795 tttcctcggtagtttactaccgaagttttcctcggcagttaactg 914751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 2335143 - 2335187
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||| |||| |||||||| |||||||||||||||||||||    
T  2335143 tttcctcggtagtttactaccgaagttttcctcggcagttaactg 2335187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 7340145 - 7340101
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| |||||||||||||||||||  |||||||| |||||||||    
T  7340145 tttcctcggcagttaactaccgaggaattcctcggtagttaactg 7340101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 13782312 - 13782272
Alignment:
Q  20 ttccgcggcagttaactaccgaggttttcctcggcagttaa 60  Q
    |||| |||||||||||| |||| ||||||||||||||||||    
T  13782312 ttcctcggcagttaactgccgaagttttcctcggcagttaa 13782272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 20547155 - 20547111
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||||| || |||||||| |||||||||||||||||||||    
T  20547155 tttcctcggcactttactaccgaagttttcctcggcagttaactg 20547111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 21835174 - 21835218
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| |||||||||| |||||| ||||||||||| |||||||||    
T  21835174 tttcctcggcagttaaataccgaagttttcctcggtagttaactg 21835218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 159
Target Start/End: Complemental strand, 34366890 - 34366846
Alignment:
Q  115 tactcgtgtggcatagccttatgtaaagtgtaaacatcaattctc 159  Q
    ||||||||||||| |||||||||||| |||  |||||||||||||    
T  34366890 tactcgtgtggcacagccttatgtaatgtgggaacatcaattctc 34366846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 42481639 - 42481603
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggca 55  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  42481639 tttcctcggcagttaactaccgaggttttactcggca 42481603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 22481 - 22336
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagt----tgtcgaggaggnnnnnnngtaaaa 114  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||| | ||| ||||||||||||||||||||    || ||||| ||       ||||||    
T  22481 tttcctcggcagttaactaccgagattttcctcagcagttaactgcagccgaatttcaaattcctcggcagttaactgccgagggggcaaaagagtaaaa 22382  T
Q  115 tactcgtgtggcatagccttatgtaaagtgtaaacatcaattctct 160  Q
    |||||||||| || | |||||||||||||||||| | |||||||||    
T  22381 tactcgtgtgacacaaccttatgtaaagtgtaaatagcaattctct 22336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 2e-23; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 28362723 - 28362798
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||| | ||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  28362723 agatttcctctgcagttaactatcgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagtt 28362798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 31146450 - 31146379
Alignment:
Q  20 ttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||| ||||||||||||||||| |||||||||| |||||||||| | |||||||||||||||||||||||||    
T  31146450 ttcctcggcagttaactaccgatgttttcctcgacagttaactgcagccggatttcaaattcctcggcagtt 31146379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 31768834 - 31768759
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||| | ||||||||  |||||||||||||||    
T  31768834 agatttcctcggcagttaactaccgaggttttcctcggcaattaactgcagccggatttttaattcctcggcagtt 31768759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 2051098 - 2051035
Alignment:
Q  27 gcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||| |||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||    
T  2051098 gcagataactaccgaggttttcctcggcagttaactgcaaccgg-tttcaaattcatcggcagtt 2051035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 13388703 - 13388775
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||| |||||||||||||||||||||||||||| |||||||||| | ||| |||| ||||| ||||||||||    
T  13388703 tttcctcggcagttaactaccgaggttttcctcgacagttaactgcagccgaatttgaaatttctcggcagtt 13388775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 6204899 - 6204850
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggattt 74  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  6204899 cggcagttaactaccgaggttttcctcggcagttaactgcagccggattt 6204850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 11691866 - 11691817
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggattt 74  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  11691866 cggcagttaactaccgaggttttcctcggcagttaactgcagccggattt 11691817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 22305180 - 22305131
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggattt 74  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  22305180 cggcagttaactaccgaggttttcctcggcagttaactgcagccggattt 22305131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 26712161 - 26712218
Alignment:
Q  1 tttttagaattatgaagatttccgcggcagttaactaccgaggttttcctcggcagtt 58  Q
    |||||||||| |||||||||| | |||||||||||||||||||||||| |||||||||    
T  26712161 tttttagaatgatgaagattttctcggcagttaactaccgaggttttcttcggcagtt 26712218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 29076317 - 29076374
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttc 75  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||| | |||||||||    
T  29076317 atttcctcggcagttaactaccgaggttttcctcagcagttaactgcagccggatttc 29076374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 29109850 - 29109907
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttc 75  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||| | |||||||||    
T  29109850 atttcctcggcagttaactaccgaggttttcctcagcagttaactgcagccggatttc 29109907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 29111290 - 29111347
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttc 75  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||| | |||||||||    
T  29111290 atttcctcggcagttaactaccgaggttttcctcagcagttaactgcagccggatttc 29111347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 32643523 - 32643588
Alignment:
Q  26 ggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||||||||||| |||||||||| | ||||||||  ||||||| |||||||    
T  32643523 ggcagttaactaccgaggttttcctcgacagttaactgcagccggatttttaattccttggcagtt 32643588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 13382707 - 13382663
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  13382707 tttcctcggcagttaactaccgaggttttcctcggcagttaactg 13382663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 26712126 - 26712082
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  26712126 tttcctcggcagttaactaccgaggttttcctcggcagttaactg 26712082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 28249963 - 28249919
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  28249963 tttcctcggcagttaactaccgaggttttcctcggcagttaactg 28249919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 11840242 - 11840289
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||    
T  11840242 agatttcctcggcagttaactaccgaggttttcctcgacagttaactg 11840289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 18351635 - 18351682
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||    
T  18351635 agatttcttcggcagttaactaccgaggttttcctcggcagttaactg 18351682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 27616796 - 27616749
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||    
T  27616796 agatttcctcggcagttaactaccgaggttttcttcggcagttaactg 27616749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 18606116 - 18606051
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||| |||||||||||||||||||||||||||| | |||| | |||||||||| |||||||    
T  18606116 cggcagttaagtaccgaggttttcctcggcagttaactgcagccgg-tgtcaaattcctaggcagtt 18606051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 23958962 - 23958896
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||||||||||||||| ||||||| | |||| |||  |||| ||||||||||    
T  23958962 cggcagttaactaccgaggttttcctcggcatttaactgcagccggttttggaatttctcggcagtt 23958896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 26351086 - 26351135
Alignment:
Q  14 gaagatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||| ||||| |||||||||||| ||||||||||||||||||||||||||    
T  26351086 gaagttttcctcggcagttaactcccgaggttttcctcggcagttaactg 26351135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 31771736 - 31771797
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaatt 80  Q
    ||||| ||||| |||||||||||| |||||||||||||||||||| | ||||||||| ||||    
T  31771736 tttcctcggcaattaactaccgagattttcctcggcagttaactgcagccggatttctaatt 31771797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 18347094 - 18347047
Alignment:
Q  44 ttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||||||||| | |||||||||| ||||||||||||||    
T  18347094 ttttcctcggcagttaactgcagccggatttcagattcctcggcagtt 18347047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 24721962 - 24721997
Alignment:
Q  28 cagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||||||||||||    
T  24721962 cagttaactaccgaggttttcctcggcagttaactg 24721997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 6207061 - 6207099
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  6207061 cggcagttaactaccgaggttttcctcggcacttaactg 6207099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 11694028 - 11694066
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  11694028 cggcagttaactaccgaggttttcctcggcaattaactg 11694066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 26712228 - 26712262
Alignment:
Q  29 agttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||||||||||||||||||||    
T  26712228 agttaactaccgaggttttcctcggcagttaactg 26712262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 7361258 - 7361197
Alignment:
Q  30 gttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||| ||||||||||||||||||| | |||| ||| ||| ||||| ||||||    
T  7361258 gttaactaccgaggatttcctcggcagttaactgcagccggtttttaaaatcctcagcagtt 7361197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 8193203 - 8193276
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||| ||||||||||||  ||| ||||||||||||||||||||| | |||  |||  |||||||||||||||    
T  8193203 atttcctcggcagttaactgtcgaagttttcctcggcagttaactgcagccgtgtttttaattcctcggcagtt 8193276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 64
Target Start/End: Original strand, 24885132 - 24885165
Alignment:
Q  31 ttaactaccgaggttttcctcggcagttaactgt 64  Q
    ||||||||||||||||||||||||||||||||||    
T  24885132 ttaactaccgaggttttcctcggcagttaactgt 24885165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 9048153 - 9048109
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||||    
T  9048153 tttcctcggcagttaactaccgaagttttcctcggtagttaactg 9048109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 14012370 - 14012426
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttc 75  Q
    ||||| ||| |||||||| |||| ||||||||||||||||||||| | |||||||||    
T  14012370 tttcctcggtagttaactgccgatgttttcctcggcagttaactgaagccggatttc 14012426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 17597519 - 17597563
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| |||||||||||| |||| |||||||||||||||||||||    
T  17597519 tttcctcggcagttaactcccgaagttttcctcggcagttaactg 17597563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 3501181 - 3501220
Alignment:
Q  24 gcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||||| ||| |||||||||||||||    
T  3501181 gcggcagttaactaccgaggattttctcggcagttaactg 3501220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 9049080 - 9049123
Alignment:
Q  20 ttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||| ||||||||||||||||| ||||||||||| |||||||||    
T  9049080 ttcctcggcagttaactaccgaagttttcctcggtagttaactg 9049123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 3501136 - 3501086
Alignment:
Q  109 gtaaaatactcgtgtggcatagccttatgtaaagtgtaaacatcaattctc 159  Q
    ||||||||||||||||||| ||||||||  || ||||||||| ||||||||    
T  3501136 gtaaaatactcgtgtggcagagccttatcaaatgtgtaaacagcaattctc 3501086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 13404633 - 13404671
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  13404633 cggcagttaactaccaaggttttccacggcagttaactg 13404671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 29097829 - 29097879
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttc 75  Q
    ||||||||||||||||| ||||| ||| ||||||||||| | |||||||||    
T  29097829 cggcagttaactaccgaagtttttctcagcagttaactgcagccggatttc 29097879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 14011795 - 14011754
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaa 60  Q
    ||||| ||| |||||||| |||||||||||||||||||||||    
T  14011795 tttcctcggtagttaactgccgaggttttcctcggcagttaa 14011754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 15546385 - 15546426
Alignment:
Q  20 ttccgcggcagttaactaccgaggttttcctcggcagttaac 61  Q
    |||| |||||||||||| |||| |||||||||||||||||||    
T  15546385 ttcctcggcagttaactgccgaagttttcctcggcagttaac 15546426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 24088790 - 24088827
Alignment:
Q  28 cagttaactaccgaggttttcctcggcagttaactgta 65  Q
    ||||||||||||||| ||||||||| ||||||||||||    
T  24088790 cagttaactaccgagattttcctcgacagttaactgta 24088827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 31516190 - 31516149
Alignment:
Q  29 agttaactaccgaggttttcctcggcagttaactgtaaccgg 70  Q
    |||||||| |||||||||||||||  ||||||||||||||||    
T  31516190 agttaactgccgaggttttcctcgaaagttaactgtaaccgg 31516149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 35096710 - 35096673
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaact 62  Q
    |||||||||||| |||| ||||||||||||||||||||    
T  35096710 cggcagttaactgccgaagttttcctcggcagttaact 35096673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 32223508 - 32223552
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||||||||||||||||| |||||||||||  ||||||||    
T  32223508 tttcctcggcagttaactaccgaagttttcctcggtggttaactg 32223552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 6e-21; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 42499481 - 42499418
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggca 88  Q
    ||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||    
T  42499481 cggcagttaactaccgaggttttcctcggcagttaactgcagtcggatttcaaattcctcggca 42499418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 34738445 - 34738377
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctc 84  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||| | || |||||| ||||||||    
T  34738445 agatttcctcggcagttaactaccgaggttttcctcggcatttaactgcagccagatttctaattcctc 34738377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 35606870 - 35606823
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||    
T  35606870 agatttcctcggcagttaactaccgaggttttcctcggcagttaactg 35606823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 47776413 - 47776338
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||| | || |||||  |||| ||||||||||    
T  47776413 agatttcctcggcagttaattaccgaggttttcctcggcagttaactgcagccagatttttaatttctcggcagtt 47776338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 9367720 - 9367774
Alignment:
Q  20 ttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggattt 74  Q
    |||| ||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  9367720 ttcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggattt 9367774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 10098077 - 10098015
Alignment:
Q  1 tttttagaattatgaagatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||| |||||||||||| |||||| ||||||||||||||||| |||| |||||||||    
T  10098077 tttttagaatgatgaagatttcctcggcagataactaccgaggttttcttcggtagttaactg 10098015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 37340374 - 37340308
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||| |||  ||||||||| |||||    
T  37340374 cggcagttaactaccgaggtttttctcggcagttaactgcaaccggtttttgaattcctcgacagtt 37340308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 45767855 - 45767900
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  45767855 atttcctcggcagttaactaccgaggttttcctcggcagttaactg 45767900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 15070433 - 15070389
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  15070433 tttcctcggcagttaactaccgaggttttcctcggcagttaactg 15070389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 17840885 - 17840929
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  17840885 tttcctcggcagttaactaccgaggttttcctcggcagttaactg 17840929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 18105451 - 18105407
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  18105451 tttcctcggcagttaactaccgaggttttcctcggcagttaactg 18105407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 44 - 91
Target Start/End: Original strand, 618745 - 618792
Alignment:
Q  44 ttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||    
T  618745 ttttcctcggcagttaactgcagccggatttcaaattcctcggcagtt 618792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 9494810 - 9494873
Alignment:
Q  28 cagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||| |||||||||||||||||||||||||| | |||| |||  |||||||||||||||    
T  9494810 cagttaactcccgaggttttcctcggcagttaactgcagccggttttttaattcctcggcagtt 9494873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 15074220 - 15074267
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||    
T  15074220 agatttcctcgacagttaactaccgaggttttcctcggcagttaactg 15074267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 17834568 - 17834521
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||    
T  17834568 agatttcctcggcagttaactaccgaagttttcctcggcagttaactg 17834521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 41884118 - 41884165
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||    
T  41884118 agatttcctcggcagttaacttccgaggttttcctcggcagttaactg 41884165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 30355240 - 30355278
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30355240 cggcagttaactaccgaggttttcctcggcagttaactg 30355278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 17834471 - 17834422
Alignment:
Q  110 taaaatactcgtgtggcatagccttatgtaaagtgtaaacatcaattctc 159  Q
    |||| ||||||||||||| |||||||||||| ||||||||||||||||||    
T  17834471 taaattactcgtgtggcacagccttatgtaatgtgtaaacatcaattctc 17834422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 19044371 - 19044303
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggca 88  Q
    ||||| ||||||||||||||||| ||||||||||||| ||||||| |  ||| |||||||||||||||||    
T  19044371 tttcctcggcagttaactaccgaagttttcctcggcaattaactgcagtcgg-tttcaaattcctcggca 19044303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 20710265 - 20710333
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggca 88  Q
    ||||| ||||||||||||||||| ||||||||||||| ||||||| |  ||| |||||||||||||||||    
T  20710265 tttcctcggcagttaactaccgaagttttcctcggcaattaactgcagtcgg-tttcaaattcctcggca 20710333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 30791002 - 30791047
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||    
T  30791002 atttcctcggcagttaactaccgaggttttcctcggtagttaactg 30791047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 47060998 - 47060961
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaact 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  47060998 cggcagttaactaccgaggttttcctcggcagttaact 47060961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 162
Target Start/End: Complemental strand, 29592612 - 29592474
Alignment:
Q  28 cagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagt----tgtcgaggaggnnnnnnngtaaaatactcgtgt 123  Q
    |||||||||||||| |||||| ||||||||||| || |  |||||||||||||||||| ||||    || | ||| ||       ||||||||  | |||    
T  29592612 cagttaactaccgaagttttcatcggcagttaattgcagtcggatttcaaattcctcgacagttaactgccaagggggcaaaagagtaaaatatccatgt 29592513  T
Q  124 ggcatagccttatgtaaagtgtaaacatcaattctcttg 162  Q
    || | |||||||||||||||||||||| |||||||||||    
T  29592512 ggtacagccttatgtaaagtgtaaacagcaattctcttg 29592474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 40587733 - 40587674
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctc 84  Q
    |||||||||||||| ||||||||||||| |||||||||| |  |||||||| ||||||||    
T  40587733 cggcagttaactactgaggttttcctcgacagttaactgcagtcggatttctaattcctc 40587674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 9365751 - 9365713
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  9365751 cggcagttaactaccgaggttttcctcggcacttaactg 9365713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 10098438 - 10098400
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  10098438 cggcagttaactaccgaggttttcctcggcacttaactg 10098400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 29593349 - 29593395
Alignment:
Q  45 tttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||| | ||||| |||||||||||||||||||    
T  29593349 tttcctcggcagttaactgcagccggaattcaaattcctcggcagtt 29593395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 34742390 - 34742456
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcg 85  Q
    ||||| || ||||||||| |||||||||||||||||||||||||| |  | |||||| |||||||||    
T  34742390 tttcctcgacagttaacttccgaggttttcctcggcagttaactgcagtcagatttctaattcctcg 34742456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 42682066 - 42682028
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  42682066 cggcagttaattaccgaggttttcctcggcagttaactg 42682028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 20564152 - 20564107
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||| |||||||||||||||||||||||| ||||||| ||||||    
T  20564152 atttcctcggcagttaactaccgaggttttcttcggcagctaactg 20564107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 28980173 - 28980238
Alignment:
Q  25 cggcagttaactaccgaggttttcc-tcggcagttaactgtaaccggatttcaaattcctcggcag 89  Q
    ||||||||||||||||||||||||| |||||||||||||| | |||||| |  ||||| |||||||    
T  28980173 cggcagttaactaccgaggttttccttcggcagttaactgcatccggatattgaattcttcggcag 28980238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 41047849 - 41047812
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaact 62  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  41047849 cggcagttaactaccgaagttttcctcggcagttaact 41047812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 10098112 - 10098156
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| || ||||||||| ||||||||||||||||||||||||||    
T  10098112 tttcctcgtcagttaactcccgaggttttcctcggcagttaactg 10098156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 16674802 - 16674838
Alignment:
Q  27 gcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||| |||||||||||||||||||    
T  16674802 gcagttaactaccgaggatttcctcggcagttaactg 16674838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 17649170 - 17649206
Alignment:
Q  27 gcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||| |||||||||||||||||||    
T  17649170 gcagttaactaccgaggatttcctcggcagttaactg 17649206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 41049196 - 41049228
Alignment:
Q  31 ttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||||||||||||||||||    
T  41049196 ttaactaccgaggttttcctcggcagttaactg 41049228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 603860 - 603813
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||  ||||||| |||||| |||||||||||||||||||||||    
T  603860 agatttccttggcagtttactaccaaggttttcctcggcagttaactg 603813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 5541586 - 5541547
Alignment:
Q  24 gcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  5541586 gcggcagttaactcccgaggatttcctcggcagttaactg 5541547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 7975613 - 7975648
Alignment:
Q  28 cagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||| |||||||||||||||||||||||||||||    
T  7975613 cagttacctaccgaggttttcctcggcagttaactg 7975648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 63
Target Start/End: Complemental strand, 10097981 - 10097950
Alignment:
Q  32 taactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||||||||    
T  10097981 taactaccgaggttttcctcggcagttaactg 10097950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 17465756 - 17465717
Alignment:
Q  24 gcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||| |||||||||||| |||||||||||||||||||    
T  17465756 gcggcagctaactaccgaggatttcctcggcagttaactg 17465717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 17587458 - 17587497
Alignment:
Q  24 gcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||| |||||||||||| |||||||||||||||||||    
T  17587458 gcggcagctaactaccgaggatttcctcggcagttaactg 17587497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 42508019 - 42508066
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| |||||||||||||| ||| |||||||| |||||||||||    
T  42508019 agatttcctcggcagttaactactgagattttcctcagcagttaactg 42508066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 89
Target Start/End: Complemental strand, 5537926 - 5537880
Alignment:
Q  43 gttttcctcggcagttaactgtaaccggatttcaaattcctcggcag 89  Q
    ||||||||||||||||||||| | ||| ||||| |||||||||||||    
T  5537926 gttttcctcggcagttaactgcagccgaatttctaattcctcggcag 5537880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 9491457 - 9491503
Alignment:
Q  17 gatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||| || |||||||||||||||| ||||||||||||| |||||    
T  9491457 gatttcctcgacagttaactaccgaggatttcctcggcagtaaactg 9491503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 17838722 - 17838672
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttc 75  Q
    ||||||||||||| ||||||||||||||| |||| |||| | |||||||||    
T  17838722 cggcagttaactatcgaggttttcctcggtagtttactgcagccggatttc 17838672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 27453615 - 27453661
Alignment:
Q  45 tttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||| | ||||||||  |||||||||||||||    
T  27453615 tttcctcggcagttaactgcagccggatttttaattcctcggcagtt 27453661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 161
Target Start/End: Original strand, 36185651 - 36185697
Alignment:
Q  115 tactcgtgtggcatagccttatgtaaagtgtaaacatcaattctctt 161  Q
    ||||||||||||| |||||||||||| ||| ||||| ||||||||||    
T  36185651 tactcgtgtggcacagccttatgtaatgtggaaacagcaattctctt 36185697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 36781450 - 36781488
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  36781450 cggcagttaactgccgaggttttcctcgggagttaactg 36781488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 38555414 - 38555452
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||| |||| |||||||||||||||||||||    
T  38555414 cggcagttaactgccgaagttttcctcggcagttaactg 38555452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 42795114 - 42795152
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||| |||| |||||||||||||||||||||    
T  42795114 cggcagttaactgccgaagttttcctcggcagttaactg 42795152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 48407282 - 48407336
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatt 73  Q
    ||||| ||||||||||||||||||||||| |||||||  |||||| | |||||||    
T  48407282 tttcctcggcagttaactaccgaggttttactcggcacctaactgcagccggatt 48407336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 20353924 - 20353969
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||| |||||||||||||| |||||||||||||  |||||||||    
T  20353924 atttcctcggcagttaactactgaggttttcctcgatagttaactg 20353969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 34623386 - 34623419
Alignment:
Q  30 gttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||| |||||||||||||||||||    
T  34623386 gttaactaccgaggatttcctcggcagttaactg 34623419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 36186492 - 36186536
Alignment:
Q  43 gttttcctcggcagttaactgtaaccggatttcaaattcctcggca 88  Q
    ||||||||||||||||||||| |||||| |||| ||||||||||||    
T  36186492 gttttcctcggcagttaactgcaaccgg-tttcgaattcctcggca 36186536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 38265524 - 38265479
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||| |||||||||||| |||||||||||||| | |||||||||    
T  38265524 atttccacggcagttaactgccgaggttttcctcagtagttaactg 38265479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 48314744 - 48314679
Alignment:
Q  26 ggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||| ||||||||||||| |||| ||||||||| | |||| | |  |||||||||||||||    
T  48314744 ggcagttaagtaccgaggttttcgtcggtagttaactgcagccggttattgaattcctcggcagtt 48314679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 618438 - 618482
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||||| | ||||||||| |||||||||||||||||||||    
T  618438 tttcctcggcactaaactaccgaagttttcctcggcagttaactg 618482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 11629764 - 11629800
Alignment:
Q  27 gcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  11629764 gcagttaactgccgaggttttcctcgacagttaactg 11629800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 14102344 - 14102384
Alignment:
Q  20 ttccgcggcagttaactaccgaggttttcctcggcagttaa 60  Q
    |||| |||||||||||| |||| ||||||||||||||||||    
T  14102344 ttcctcggcagttaactgccgaagttttcctcggcagttaa 14102384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 14412361 - 14412401
Alignment:
Q  20 ttccgcggcagttaactaccgaggttttcctcggcagttaa 60  Q
    |||| |||||||||||| |||| ||||||||||||||||||    
T  14412361 ttcctcggcagttaactgccgaagttttcctcggcagttaa 14412401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 15059990 - 15059946
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||||| | ||||||||| |||||||||||||||||||||    
T  15059990 tttcctcggcactaaactaccgaagttttcctcggcagttaactg 15059946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 16636203 - 16636239
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggca 55  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  16636203 tttcctcggcagttaactaccgaggttttactcggca 16636239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 16681070 - 16681030
Alignment:
Q  17 gatttccgcggcagttaactaccgaggttttcctcggcagt 57  Q
    ||||||| |||||||||||||| || |||||||||||||||    
T  16681070 gatttcctcggcagttaactactgaagttttcctcggcagt 16681030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 17459435 - 17459399
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggca 55  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  17459435 tttcctcggcagttaactaccgaggttttactcggca 17459399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 17593779 - 17593815
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggca 55  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  17593779 tttcctcggcagttaactaccgaggttttactcggca 17593815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 17655306 - 17655266
Alignment:
Q  17 gatttccgcggcagttaactaccgaggttttcctcggcagt 57  Q
    ||||||| |||||||||||||| || |||||||||||||||    
T  17655306 gatttcctcggcagttaactactgaagttttcctcggcagt 17655266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 19072509 - 19072469
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgta 65  Q
    |||||||||||| || | |||||||||||||||||||||||    
T  19072509 cggcagttaactgccaaagttttcctcggcagttaactgta 19072469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 29112443 - 29112407
Alignment:
Q  27 gcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||| |||| |||||||||||||||||||||    
T  29112443 gcagttaactgccgaagttttcctcggcagttaactg 29112407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Complemental strand, 34139947 - 34139903
Alignment:
Q  47 tcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||| | ||||||||| ||||| |||||||||    
T  34139947 tcctcggcagttaactgcagccggatttctaattcttcggcagtt 34139903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 37345143 - 37345107
Alignment:
Q  27 gcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  37345143 gcagttaactcccgagattttcctcggcagttaactg 37345107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 63
Target Start/End: Complemental strand, 40140801 - 40140773
Alignment:
Q  35 ctaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||||||||||||||    
T  40140801 ctaccgaggttttcctcggcagttaactg 40140773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 63
Target Start/End: Complemental strand, 45763749 - 45763721
Alignment:
Q  35 ctaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||||||||||||||    
T  45763749 ctaccgaggttttcctcggcagttaactg 45763721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 9e-20; HSPs: 85)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 27276368 - 27276441
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||| ||||| |||||| |||||||||||||||||||||||||| | |||||||||||||||||| ||||||    
T  27276368 atttcctcggcaattaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcagcagtt 27276441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 3795415 - 3795343
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||| |||||||||||| || ||||||||||||||||||||||| | ||||||||||||||||||| |||||    
T  3795415 tttcctcggcagttaacttccaaggttttcctcggcagttaactgcagccggatttcaaattcctcgacagtt 3795343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 25184825 - 25184896
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||| |||||    
T  25184825 tttcctcggcagttaactaccgaggttttcctcggcagttaactgcagccgg-tttcaaattcctcgacagtt 25184896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 24754019 - 24754170
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt-----------gtcgaggaggnnnnnn 107  Q
    ||||| |||||||| | |||||||||||||||||| ||||||||| | ||| |||||||||||||||||||||           | ||||| ||          
T  24754019 tttcctcggcagtttattaccgaggttttcctcggtagttaactgcagccgaatttcaaattcctcggcagttagcagttaactgccgagggggcaaaag 24754118  T
Q  108 ngtaaaatactcgtgtggcatagccttatgtaaagtgtaaacatcaattctc 159  Q
     |||||||||||||||| || |||||||||||||||||||||| ||||||||    
T  24754119 agtaaaatactcgtgtgacacagccttatgtaaagtgtaaacagcaattctc 24754170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 41183219 - 41183290
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||| | |||| |||||||||| |||||||||    
T  41183219 tttcctcggcagttaactaccgaggttttcctcggtagttaactgcagccgg-tttcaaattcttcggcagtt 41183290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 43536183 - 43536135
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactgt 64  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  43536183 agatttcctcggcagttaactaccgaggttttcctcggcagttaactgt 43536135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 1149533 - 1149478
Alignment:
Q  36 taccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||| |||||||||| || ||||||||||||||||||||||||    
T  1149533 taccgaggttttcctcgacagttaactgcaatcggatttcaaattcctcggcagtt 1149478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 7189943 - 7190002
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttc 75  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||| | |||||||||    
T  7189943 agatttcctcggcagttaactaccgaagttttcctcggcagttaactgcagccggatttc 7190002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 28468722 - 28468675
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||    
T  28468722 agatttcctcggcagttaactaccgaggttttcctcggcagttaactg 28468675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 19187224 - 19187290
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||||||||||||||||||||| |||||| ||| ||||||  |||| ||||||||||    
T  19187224 cggcagttaactaccgaggttttcctcggcaggtaactgcaactggattttgaatttctcggcagtt 19187290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 28472060 - 28472122
Alignment:
Q  1 tttttagaattatgaagatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||| |||||||||||| || ||||||||||||||||||||| |||| |||||||||    
T  28472060 tttttagaatgatgaagatttcctcgacagttaactaccgaggttttcttcggtagttaactg 28472122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 30273146 - 30273200
Alignment:
Q  20 ttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggattt 74  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  30273146 ttcctcggcaattaactaccgaggttttcctcggcagttaactgtagccggattt 30273200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 43982276 - 43982222
Alignment:
Q  20 ttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggattt 74  Q
    |||| ||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  43982276 ttcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggattt 43982222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 45475508 - 45475446
Alignment:
Q  29 agttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||  |||| ||||||||||    
T  45475508 agttaactaccgaggttttcctcggcagttaactgtagccggtttttgaatttctcggcagtt 45475446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 3943186 - 3943243
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttc 75  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||| | |||||||||    
T  3943186 atttcctcggcagttaactaccgaggtttttctcggcagttaactgcagccggatttc 3943243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 17424204 - 17424155
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggattt 74  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  17424204 cggcagttaactaccgaggttttcctcggcagttaactgcagccggattt 17424155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 1096649 - 1096601
Alignment:
Q  43 gttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||    
T  1096649 gttttcctcggcagttaactgcagccggatttcaaattcctcggcagtt 1096601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 5351726 - 5351770
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaact 62  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  5351726 atttcctcggcagttaactaccgaggttttcctcggcagttaact 5351770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 22003396 - 22003440
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  22003396 tttcctcggcagttaactaccgaggttttcctcggcagttaactg 22003440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 34638206 - 34638147
Alignment:
Q  31 ttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||||    
T  34638206 ttaactaccgaagttttcctcggcagttaactg-aaccgaatttctaattcctcggcagtt 34638147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 2917752 - 2917689
Alignment:
Q  28 cagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||| |||||||||||||||||||||||||| |||| |||  |||| ||||||||||    
T  2917752 cagttaactactgaggttttcctcggcagttaactgtagccggtttttcaatttctcggcagtt 2917689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 23346858 - 23346803
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggattt 74  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| | ||||||||    
T  23346858 tttcctcggcagttaactaccgaggttttccttggcagttaactgcagccggattt 23346803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 25964877 - 25964822
Alignment:
Q  31 ttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcgg 86  Q
    ||||||||||||||||||||||||||||||||| | ||||||||  ||||||||||    
T  25964877 ttaactaccgaggttttcctcggcagttaactgcagccggatttttaattcctcgg 25964822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 32956335 - 32956410
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||| |||||||| ||||||||| |||||||||||||||||||  | ||||||||| ||||  |||||||||    
T  32956335 agatttcctcggcagttgactaccgagattttcctcggcagttaactacagccggatttctaatttatcggcagtt 32956410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 38945815 - 38945768
Alignment:
Q  44 ttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||    
T  38945815 ttttcctcggcagttaactgcagccggatttcaaattcctcggcagtt 38945768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 3803564 - 3803610
Alignment:
Q  45 tttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||    
T  3803564 tttcctcggcagttaactgcagccggatttcaaattcctcggcagtt 3803610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 30493440 - 30493394
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaact 62  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||    
T  30493440 agatttcctcggcagttaactaccgagattttcctcggcagttaact 30493394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 34921760 - 34921826
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||||||||||| ||||||||||| | |||| |||  |||| ||||||||||    
T  34921760 cggcagttaactaccgaggttttcctcagcagttaactgcagccggtttttgaatttctcggcagtt 34921826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 41008929 - 41008994
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||| |||||||||||||||||| || | |||| || |||||||||||||||||    
T  41008929 cggcagttaactaccgaagttttcctcggcagttaaatgcagccgg-ttacaaattcctcggcagtt 41008994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 18000311 - 18000266
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||| || ||||||||||||||||||||||||||||||||||||    
T  18000311 atttcctcgccagttaactaccgaggttttcctcggcagttaactg 18000266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 28477069 - 28477106
Alignment:
Q  26 ggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28477069 ggcagttaactaccgaggttttcctcggcagttaactg 28477106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 29397988 - 29397927
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaatt 80  Q
    ||||| |||||||||||| |||||||||||||||||||||||||| |  |||||||| ||||    
T  29397988 tttcctcggcagttaactcccgaggttttcctcggcagttaactgcagtcggatttctaatt 29397927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 41500235 - 41500284
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggattt 74  Q
    ||||||||||||||||||||||| ||||||||||||||| | ||||||||    
T  41500235 cggcagttaactaccgaggtttttctcggcagttaactgcagccggattt 41500284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 44100792 - 44100837
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||    
T  44100792 atttcctcggtagttaactaccgaggttttcctcggcagttaactg 44100837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 2983478 - 2983434
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||| |||||||||||||||| |||||||||    
T  2983478 tttccgcggcagttaactgccgaggttttcctcggtagttaactg 2983434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 20951069 - 20951113
Alignment:
Q  47 tcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||| | |||||||||||||||||||||||||    
T  20951069 tcctcggcagttaactgcagccggatttcaaattcctcggcagtt 20951113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 23347323 - 23347379
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttc 75  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||| | |||||||||    
T  23347323 tttcctcggcagttagctaccgaggttttcctcggtagttaactgcagccggatttc 23347379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 41004606 - 41004535
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||| ||||||||||||||||| |||||  |||||||||||||| | |||| || |||||||||||||||||    
T  41004606 tttcctcggcagttaactaccgaagtttttttcggcagttaactgcagccgg-ttacaaattcctcggcagtt 41004535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 7267436 - 7267483
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| |||||||||||||||||| ||||||| ||||||||||||    
T  7267436 agatttcctcggcagttaactaccgagattttccttggcagttaactg 7267483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 17420649 - 17420602
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| ||||||||||||||||||| ||| |||||||||||||||    
T  17420649 agatttcctcggcagttaactaccgaggattttctcggcagttaactg 17420602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 39947680 - 39947633
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| | ||||||||||||||| |||||||||||||||||||||    
T  39947680 agatttcctctgcagttaactaccgaagttttcctcggcagttaactg 39947633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 3935935 - 3935897
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  3935935 cggcagttaactaccgaggttttcctcggcacttaactg 3935897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 3937848 - 3937902
Alignment:
Q  20 ttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggattt 74  Q
    |||| |||||||||||| ||||||||| |||||||||||||||| | ||||||||    
T  3937848 ttcctcggcagttaacttccgaggtttacctcggcagttaactgcagccggattt 3937902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 34639315 - 34639381
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||| |||| ||||||||| ||||||||||| | ||||||||  |||| ||||||||||    
T  34639315 cggcagttaactcccgatgttttcctcagcagttaactgcagccggatttttaatttctcggcagtt 34639381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 35493342 - 35493408
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||||||  |||||||||||||||||||| | | || |||  |||||||||||||||    
T  35493342 cggcagttaactaccgatattttcctcggcagttaactgcagctggtttttgaattcctcggcagtt 35493408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 41497540 - 41497478
Alignment:
Q  29 agttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||||||||||| ||||||| | |||| |||  ||||| |||||||||    
T  41497540 agttaactaccgaggttttcctcggcaattaactgcagccggtttttgaattcttcggcagtt 41497478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 42499858 - 42499820
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  42499858 cggcagttaactaccgaggttttcctcggcacttaactg 42499820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 43491181 - 43491115
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||| |||||||||||| ||||||| || | |||| | | ||||||||||||||||    
T  43491181 cggcagttaactaccaaggttttcctcgacagttaattgcagccggttattaaattcctcggcagtt 43491115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 43943767 - 43943701
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcg 85  Q
    ||||| |||||||||||||||||| ||||||||| |||||||||| | |||| | | ||||||||||    
T  43943767 tttcctcggcagttaactaccgagtttttcctcgacagttaactgcagccggttattaaattcctcg 43943701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 43984302 - 43984340
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  43984302 cggcagttaactaccgaggttttcctcggcacttaactg 43984340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 7263096 - 7263051
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||| |||||||||||| |||||| |||||||||||||||||||    
T  7263096 atttcctcggcagttaactcccgaggatttcctcggcagttaactg 7263051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 35490774 - 35490741
Alignment:
Q  29 agttaactaccgaggttttcctcggcagttaact 62  Q
    ||||||||||||||||||||||||||||||||||    
T  35490774 agttaactaccgaggttttcctcggcagttaact 35490741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 39798522 - 39798477
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||| |||||||||||| |||||| |||||||||||||||||||    
T  39798522 atttcctcggcagttaactcccgaggatttcctcggcagttaactg 39798477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 41564498 - 41564531
Alignment:
Q  30 gttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||||||||||    
T  41564498 gttaactaccgaggttttcctcggcagttaactg 41564531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 82265 - 82328
Alignment:
Q  27 gcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||| ||||||||||||| |||||||||| | |||| ||||||||| |||| |||||    
T  82265 gcagttaactacggaggttttcctcgacagttaactgcagccgg-tttcaaattactcgacagtt 82328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 14456580 - 14456536
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||| |||||||| ||||||||||||||||||||||||||    
T  14456580 tttcctcggtagttaactgccgaggttttcctcggcagttaactg 14456536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 24601717 - 24601645
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||| ||||||||||||||||| | ||||||||| ||||||||| | || | ||| |||||||||| |||||    
T  24601717 tttcctcggcagttaactaccgaagatttcctcggtagttaactgcagccagtttttaaattcctcgacagtt 24601645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 24612397 - 24612469
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||| ||||||||||||||||| | ||||||||| ||||||||| | || | ||| |||||||||| |||||    
T  24612397 tttcctcggcagttaactaccgaagatttcctcggtagttaactgcagccagtttttaaattcctcgacagtt 24612469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 30271143 - 30271087
Alignment:
Q  28 cagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctc 84  Q
    |||||||||||||| ||||||||| ||||||||||| | ||||||||  ||||||||    
T  30271143 cagttaactaccgaagttttcctcagcagttaactgcagccggatttttaattcctc 30271087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 35490758 - 35490686
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||| ||||||||||||||| |||||||| || ||||||||||| | |||| |||  ||||| |||||||||    
T  35490758 tttcctcggcagttaactaccaaggttttcttcagcagttaactgcagccggtttttgaattcttcggcagtt 35490686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 45137425 - 45137497
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggca 88  Q
    |||||||  ||||||||||||| ||| |||||| |||||||||||||| | ||| ||||  ||||||||||||    
T  45137425 agatttcatcggcagttaactatcgaagttttcatcggcagttaactgcagccgaatttttaattcctcggca 45137497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 91
Target Start/End: Original strand, 1101072 - 1101119
Alignment:
Q  44 ttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||||||||  | ||||||||||||||| |||||||||    
T  1101072 ttttcctcggcagttaactacagccggatttcaaattcatcggcagtt 1101119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 62
Target Start/End: Original strand, 6637567 - 6637602
Alignment:
Q  27 gcagttaactaccgaggttttcctcggcagttaact 62  Q
    |||||||||||||||||||||||| |||||||||||    
T  6637567 gcagttaactaccgaggttttccttggcagttaact 6637602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 23409502 - 23409565
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggca 88  Q
    |||||||| ||| |||||||||||||||||||||||||| | || | |||  ||||||||||||    
T  23409502 cggcagtttacttccgaggttttcctcggcagttaactgcagccagtttttgaattcctcggca 23409565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 33222693 - 33222650
Alignment:
Q  20 ttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||| |||||||||||| |||| |||||||||||||||||||||    
T  33222693 ttcctcggcagttaactgccgaagttttcctcggcagttaactg 33222650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 39393106 - 39393043
Alignment:
Q  28 cagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||||||||| |||| |||||||||  | ||| ||||| ||| |||||||||||    
T  39393106 cagttaactaccgaggtttttctcgacagttaactacatccgaatttctaatacctcggcagtt 39393043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 435414 - 435349
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||| ||||| ||||||||||||||| |||| |||| | || |||||||||||| |||||||||    
T  435414 cggcagtcaactatcgaggttttcctcggtagtttactgcagcc-gatttcaaattcatcggcagtt 435349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 12908430 - 12908468
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||| | |||||||||||||||||||||||    
T  12908430 cggcagttaactatcaaggttttcctcggcagttaactg 12908468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 17426366 - 17426404
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||| |||||||||||||||| |||||||    
T  17426366 cggcagttaactactgaggttttcctcggcacttaactg 17426404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 26543990 - 26544028
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  26543990 cggcagttaactaccgaggttttcctcagtagttaactg 26544028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 28138657 - 28138607
Alignment:
Q  20 ttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccgg 70  Q
    |||| |||||||||||| |||| |||||||||||||||||| || ||||||    
T  28138657 ttcctcggcagttaactgccgaagttttcctcggcagttaattgcaaccgg 28138607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 28419392 - 28419342
Alignment:
Q  109 gtaaaatactcgtgtggcatagccttatgtaaagtgtaaacatcaattctc 159  Q
    ||||||||||||||||||| ||||||||  || ||||||||| ||||||||    
T  28419392 gtaaaatactcgtgtggcacagccttatcaaatgtgtaaacagcaattctc 28419342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 40221131 - 40221169
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  40221131 cggcagttaactgccgaggttttcctcggtagttaactg 40221169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 41565390 - 41565352
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  41565390 cggcagttaactgccgaggttttcctcggtagttaactg 41565352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 2648189 - 2648152
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaact 62  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  2648189 cggcaattaactaccgagattttcctcggcagttaact 2648152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 7185039 - 7184990
Alignment:
Q  110 taaaatactcgtgtggcatagccttatgtaaagtgtaaacatcaattctc 159  Q
    |||| ||||||| ||||| |||||||||||| ||||||||| ||||||||    
T  7185039 taaagtactcgtttggcacagccttatgtaatgtgtaaacagcaattctc 7184990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 10365793 - 10365830
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaact 62  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  10365793 cggcatttaactaccaaggttttcctcggcagttaact 10365830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 41273337 - 41273386
Alignment:
Q  110 taaaatactcgtgtggcatagccttatgtaaagtgtaaacatcaattctc 159  Q
    |||| ||||||||||||| |||| ||||||| ||||||||| ||||||||    
T  41273337 taaagtactcgtgtggcacagccatatgtaatgtgtaaacaacaattctc 41273386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 213447 - 213491
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| |||||||||||||||||||  |||||||| |||||||||    
T  213447 tttcctcggcagttaactaccgaggaattcctcggtagttaactg 213491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 9660050 - 9660094
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| ||||| ||||||||| ||||||||||||||||| |||||    
T  9660050 tttcctcggcaattaactaccaaggttttcctcggcagtcaactg 9660094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 10424917 - 10424861
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttc 75  Q
    ||||| ||| |||| ||| |||| ||||||||||||||||||||||| ||| |||||    
T  10424917 tttcctcggtagtttactgccgaagttttcctcggcagttaactgtagccgtatttc 10424861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 15835172 - 15835208
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggca 55  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  15835172 tttcctcggcagttaactaccgaggttttactcggca 15835208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 18003267 - 18003311
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| |||||||||||||||||||  |||||||| |||||||||    
T  18003267 tttcctcggcagttaactaccgaggaattcctcggtagttaactg 18003311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 159
Target Start/End: Complemental strand, 39377679 - 39377635
Alignment:
Q  115 tactcgtgtggcatagccttatgtaaagtgtaaacatcaattctc 159  Q
    ||||||||||||| |||||||||||| ||| ||||| ||||||||    
T  39377679 tactcgtgtggcacagccttatgtaatgtggaaacagcaattctc 39377635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 42177209 - 42177281
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||| ||||||||||||||||| |||||||| || ||||||| | | |||| ||   |||||||||||||||    
T  42177209 tttcctcggcagttaactaccgaagttttcctaggtagttaacagcagccggtttatgaattcctcggcagtt 42177281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 49; Significance: 3e-19; HSPs: 5)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 909 - 837
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  | ||| ||||||||||||| |||||||    
T  909 tttcctcggcagttaactaccgaggttttcctcggcagttaactacagccgaatttcaaattcctaggcagtt 837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 936 - 892
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaact 62  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  936 atttcctcggcagttaactaccgaggttttcctcggcagttaact 892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 5409 - 5365
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  5409 tttcctcggcagttaactaccgaggttttcctcggcagttaactg 5365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 63
Target Start/End: Complemental strand, 1229 - 1200
Alignment:
Q  34 actaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||||||    
T  1229 actaccgaggttttcctcggcagttaactg 1200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 11496 - 11456
Alignment:
Q  24 gcggcagttaactaccgaggttttcctcggcagttaactgt 64  Q
    ||||||| | |||||||||| ||||||||||||||||||||    
T  11496 gcggcagcttactaccgaggatttcctcggcagttaactgt 11456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 8270 - 8205
Alignment:
Q  26 ggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||||||||| || ||||||||||| | ||||||||||||||||| |||||||    
T  8270 ggcagttaactaccgaggttttcttcagcagttaactgcatccggatttcaaattccttggcagtt 8205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 4394 - 4467
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||| ||||||||||||||||||| ||||||||| | ||||||| | ||||| |||||||||||||||||||    
T  4394 atttcctcggcagttaactaccgaggatttcctcggtatttaactgcagccggagttcaaattcctcggcagtt 4467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0794 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0794
Description:

Target: scaffold0794; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 5349 - 5278
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||| | |||| |||||||||| |||||||||    
T  5349 tttcctcggcagttaactaccgaggttttcctcggtagttaactgcagccgg-tttcaaattcttcggcagtt 5278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 417 - 462
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  417 atttcctcggcagttaactaccgaggttttcctcggcagttaactg 462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 79 - 119
Alignment:
Q  15 aagatttccgcggcagttaactaccgaggttttcctcggca 55  Q
    |||| |||| ||| |||||||||||||||||||||||||||    
T  79 aagagttcctcggtagttaactaccgaggttttcctcggca 119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 19213 - 19161
Alignment:
Q  109 gtaaaatactcgtgtggcatagccttatgtaaagtgtaaacatcaattctctt 161  Q
    |||| |||||||||||||| |||||||||||||||||||||| ||||||||||    
T  19213 gtaatatactcgtgtggcacagccttatgtaaagtgtaaacaacaattctctt 19161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 1177 - 1247
Alignment:
Q  20 ttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||| |||||||||||| ||||||||||||||||||||||| ||   |||| ||||||||||||||||||||    
T  1177 ttcctcggcagttaacttccgaggttttcctcggcagttaattgctgccgg-tttcaaattcctcggcagtt 1247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 50125 - 50081
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  50125 tttcctcggcagttaactaccgaggttttcctcggcagttaactg 50081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 232827 - 232895
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggc 87  Q
    ||||| |||||||||||||||||||||||||||||||||||| || | ||| ||||  |||||||||||    
T  232827 tttcctcggcagttaactaccgaggttttcctcggcagttaattgcagccgaatttttaattcctcggc 232895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 3)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 41014 - 41061
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||    
T  41014 agatttcctcggcagttaactcccgaggttttcctcggcagttaactg 41061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 36535 - 36584
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggattt 74  Q
    |||||||||||||||||||||||||||||||||||| || | ||||||||    
T  36535 cggcagttaactaccgaggttttcctcggcagttaattgcagccggattt 36584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 36656 - 36616
Alignment:
Q  18 atttccgcggcagttaactaccgaggttttcctcggcagtt 58  Q
    |||||| ||||||||||||||||||||||||  ||||||||    
T  36656 atttcctcggcagttaactaccgaggttttctgcggcagtt 36616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 12389 - 12439
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttc 75  Q
    |||||||||||||||||||||||| |||||||||||||| | |||||||||    
T  12389 cggcagttaactaccgaggttttcatcggcagttaactgcagccggatttc 12439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 10724 - 10686
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  10724 cggcagttaactaccgaggtttccctcggcagttaactg 10686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000001; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 64
Target Start/End: Complemental strand, 235969 - 235932
Alignment:
Q  27 gcagttaactaccgaggttttcctcggcagttaactgt 64  Q
    ||||||||||||||||||||||||||||||||||||||    
T  235969 gcagttaactaccgaggttttcctcggcagttaactgt 235932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 235917 - 235867
Alignment:
Q  109 gtaaaatactcgtgtggcatagccttatgtaaagtgtaaacatcaattctc 159  Q
    |||||||||||||||| || |||||||||||| ||||||||| ||||||||    
T  235917 gtaaaatactcgtgtgacacagccttatgtaatgtgtaaacaacaattctc 235867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 236226 - 236272
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaact 62  Q
    |||||||| ||||||||||||||||| ||||||||| ||||||||||    
T  236226 agatttcctcggcagttaactaccgaagttttcctctgcagttaact 236272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 236250 - 236299
Alignment:
Q  14 gaagatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||| ||||| | ||||||||||| |||||||||||||||||||| ||||    
T  236250 gaagttttcctctgcagttaactatcgaggttttcctcggcagtttactg 236299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 717 - 761
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||    
T  717 tttcctcggcagttaactaccgaggttttcctgggcagttaactg 761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 20107 - 20179
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||| ||||||| ||||||||||| |||||||| |||||||||||| |||  |||  |||||||||||||||    
T  20107 tttcctcggcagtaaactaccgaggatttcctcgacagttaactgtagccgatttttgaattcctcggcagtt 20179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 7499 - 7452
Alignment:
Q  16 agatttccgcggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||| ||||||||||||||||||||||||||||| ||| |||||    
T  7499 agatttcctcggcagttaactaccgaggttttcctcggtagtcaactg 7452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 11833 - 11786
Alignment:
Q  44 ttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||||||||||||||| | |||||||||||||||||||| ||||    
T  11833 ttttcctcggcagttaactgcagccggatttcaaattcctcggtagtt 11786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 18099 - 18037
Alignment:
Q  29 agttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||| |||||| ||| ||||||||||||||| | |||| |||| |||||||||||||||    
T  18099 agttaactcccgaggatttactcggcagttaactgcagccgggtttctaattcctcggcagtt 18037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 15623 - 15661
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  15623 cggcagttaactaccaaggttttcctcggcagttaactg 15661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 54745 - 54807
Alignment:
Q  29 agttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||||||| |||||| ||| ||||||||||||||| | |||| |||| |||||||||||||||    
T  54745 agttaactcccgaggatttactcggcagttaactgcagccgggtttctaattcctcggcagtt 54807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 84652 - 84614
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagttaactg 63  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  84652 cggcagttaactaccgaggttttcctcggcacttaactg 84614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 63
Target Start/End: Complemental strand, 3951 - 3919
Alignment:
Q  31 ttaactaccgaggttttcctcggcagttaactg 63  Q
    |||||||||||||||||||||||||||||||||    
T  3951 ttaactaccgaggttttcctcggcagttaactg 3919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 430 - 501
Alignment:
Q  20 ttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    |||| ||| |||||||| ||||||||||||||| |||||||||| | |||||||   ||||| |||||||||    
T  430 ttcctcggtagttaactcccgaggttttcctcgacagttaactgcagccggattattaattcttcggcagtt 501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 12465 - 12419
Alignment:
Q  14 gaagatttccgcggcagttaactaccgaggttttcctcggcagttaa 60  Q
    |||| ||||| ||| |||||||| |||||||||||||||||||||||    
T  12465 gaagttttcctcgggagttaactcccgaggttttcctcggcagttaa 12419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 7305 - 7338
Alignment:
Q  25 cggcagttaactaccgaggttttcctcggcagtt 58  Q
    ||||||||||||||||||||||| ||||||||||    
T  7305 cggcagttaactaccgaggtttttctcggcagtt 7338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 754 - 826
Alignment:
Q  19 tttccgcggcagttaactaccgaggttttcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||| ||||||||||||||||| |||||||| || ||||||| | | |||| ||   |||||||||||||||    
T  754 tttcctcggcagttaactaccgaagttttcctaggtagttaacagcagccggtttatgaattcctcggcagtt 826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 159
Target Start/End: Original strand, 13302 - 13346
Alignment:
Q  115 tactcgtgtggcatagccttatgtaaagtgtaaacatcaattctc 159  Q
    ||||||||||||| |||||||||||| ||| ||||| ||||||||    
T  13302 tactcgtgtggcacagccttatgtaatgtggaaacagcaattctc 13346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Complemental strand, 872 - 828
Alignment:
Q  47 tcctcggcagttaactgtaaccggatttcaaattcctcggcagtt 91  Q
    ||||||||||||||||| | ||||||||| ||||| |||||||||    
T  872 tcctcggcagttaactgcagccggatttctaattcttcggcagtt 828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University