View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17562_high_9 (Length: 238)
Name: NF17562_high_9
Description: NF17562
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17562_high_9 |
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Alignment Details
Target: chr2 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 29062143 - 29062364
Alignment:
| Q |
1 |
tttacgaagacaatgataatcatatttctaatattaagaatctttgccctcttcggagggatgacattaacgttcaaaatttaaatacaccattgtgttg |
100 |
Q |
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| T |
29062143 |
tttacgaagacaatgataatcatatttctaatattaagaatttttgccctcttcggaaggatgacattaacgttcaaaatttaaatacaccattgtgtcg |
29062242 |
T |
|
| Q |
101 |
ctttgtgagagataatggtgattcggatgttgagaattttactccccatctttcctctgatatcgttgacaatattggaactatgatcccattatcaaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |
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| T |
29062243 |
ctttgtgagagataatggtgattcggatgttgagaattttactccccatctttcctctgatatcgttgacaagattggaactatgatcccactatcaaac |
29062342 |
T |
|
| Q |
201 |
gctttaggagaggataatattg |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
29062343 |
gctttaggagaggataatattg |
29062364 |
T |
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