View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17563_low_13 (Length: 303)
Name: NF17563_low_13
Description: NF17563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17563_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 20 - 292
Target Start/End: Complemental strand, 6032675 - 6032403
Alignment:
| Q |
20 |
attagcatcccaatttggtgataacattggagagtcatgatcaaaactagcttccttagggatcaaattagtgttttgttgataatgatgagaagaagat |
119 |
Q |
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| T |
6032675 |
attagcatcccaatttggtgataacattggagagtcatgatcaaaactagcttccttagggatcaaattagtgttttgttgataatgatgagaagaagat |
6032576 |
T |
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| Q |
120 |
ttcttcaactttctcttaatcacaatagattcctcaatgaagttaaagatatcatctctttgaagtgattttgaagtttcatcttcattaggcatcaatt |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6032575 |
ttcttcaactttctcttaatcacaatagattcctcaatgaagttaaagatatcatctctttgaagtgattttgaagtttcatcttcattaggcatcaatt |
6032476 |
T |
|
| Q |
220 |
gatgaaggatttgttgattttgatcaatttcaggatatttttctttcaaatcttcttgcatcttcatctcact |
292 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6032475 |
gatgaaggatttgttgattttgatcaatttcaggatatttttctttcaaatcttcttgcatcttcatctcact |
6032403 |
T |
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