View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17563_low_7 (Length: 437)
Name: NF17563_low_7
Description: NF17563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17563_low_7 |
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Alignment Details
Target: chr3 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 93 - 420
Target Start/End: Original strand, 30607357 - 30607684
Alignment:
| Q |
93 |
tggtttattcaaccccaatttgattttcatgttcgactaaactctgattcaaatgagattataataatcagttaaatagactgattctcaactaaatcag |
192 |
Q |
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| T |
30607357 |
tggtttattcaaccccaatccgattttcatgttcgactaaactctgatttaaatgagattataataatcggttaaatagactgattctcaactaaatcag |
30607456 |
T |
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| Q |
193 |
ttgaacatgtcggttcgttttttaaaacaccgataggttggctttgaacttattccatgataaatgtaagaattattcatgaaggaaagtgttgaaattt |
292 |
Q |
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| T |
30607457 |
ttgaacatgtcggttcgatttttaaaacaccgataggttggctttgaacttattccatgataaatgtaagaattattcatgaaggaaagtgttgaaattt |
30607556 |
T |
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| Q |
293 |
tagagacatacatagtgacccaacctagttgaaggatgataatcaagataaactttatgtacggatagaaagctatttccaatatcaaactggtatgtcg |
392 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30607557 |
tagagacatacatagtgacccaacctagttgaaggatgataatcaagataaactttatgtacggatagaaagctatttccaatatcaaactggtatgtcg |
30607656 |
T |
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| Q |
393 |
atccagctttggtatcaaaagtgcaaaa |
420 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
30607657 |
atccagctttggtatcaaaagtgcaaaa |
30607684 |
T |
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