View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17564_low_1 (Length: 695)

Name: NF17564_low_1
Description: NF17564
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17564_low_1
NF17564_low_1
[»] chr3 (31 HSPs)
chr3 (19-135)||(242412-242528)
chr3 (143-209)||(242247-242313)
chr3 (311-372)||(242090-242151)
chr3 (357-460)||(43079882-43079985)
chr3 (357-460)||(40240525-40240628)
chr3 (360-460)||(40581024-40581125)
chr3 (357-457)||(22809144-22809244)
chr3 (357-456)||(34707665-34707764)
chr3 (357-428)||(53218020-53218091)
chr3 (359-460)||(45331243-45331344)
chr3 (360-460)||(37243504-37243604)
chr3 (357-460)||(3845890-3845992)
chr3 (357-460)||(10521189-10521292)
chr3 (360-431)||(28741191-28741262)
chr3 (357-460)||(42956127-42956230)
chr3 (357-431)||(3870203-3870277)
chr3 (374-460)||(20685837-20685923)
chr3 (357-431)||(23816148-23816222)
chr3 (357-407)||(52421142-52421192)
chr3 (371-428)||(29614242-29614299)
chr3 (357-457)||(48597817-48597918)
chr3 (357-428)||(52021281-52021353)
chr3 (357-460)||(10667433-10667536)
chr3 (381-460)||(17752079-17752158)
chr3 (381-460)||(19053399-19053478)
chr3 (369-431)||(50021946-50022007)
chr3 (371-428)||(3645351-3645408)
chr3 (375-460)||(20174888-20174973)
chr3 (360-428)||(1516078-1516146)
chr3 (357-460)||(10272157-10272258)
chr3 (384-428)||(29830619-29830663)
[»] chr1 (34 HSPs)
chr1 (357-453)||(3069809-3069905)
chr1 (357-460)||(37712102-37712205)
chr1 (19-116)||(6927141-6927240)
chr1 (357-460)||(4068150-4068253)
chr1 (357-460)||(48819334-48819437)
chr1 (357-460)||(6337704-6337807)
chr1 (357-460)||(16888914-16889016)
chr1 (357-460)||(37329360-37329463)
chr1 (357-454)||(15515301-15515398)
chr1 (357-460)||(26988183-26988286)
chr1 (357-460)||(28690039-28690142)
chr1 (357-460)||(41196658-41196761)
chr1 (357-431)||(1005375-1005449)
chr1 (357-431)||(35590165-35590239)
chr1 (363-450)||(45267506-45267594)
chr1 (357-460)||(9572732-9572835)
chr1 (357-460)||(13038982-13039085)
chr1 (361-460)||(26435123-26435222)
chr1 (357-460)||(36422929-36423032)
chr1 (374-456)||(14460993-14461075)
chr1 (371-460)||(16708848-16708937)
chr1 (371-460)||(32497220-32497309)
chr1 (357-460)||(23544826-23544929)
chr1 (357-460)||(18317036-18317139)
chr1 (357-431)||(26946081-26946155)
chr1 (371-460)||(35282542-35282631)
chr1 (360-460)||(46500948-46501049)
chr1 (369-457)||(31249729-31249817)
chr1 (357-460)||(22593355-22593458)
chr1 (360-423)||(49971289-49971352)
chr1 (366-460)||(1683849-1683943)
chr1 (357-391)||(39941545-39941579)
chr1 (371-460)||(25485797-25485886)
chr1 (371-456)||(41003437-41003521)
[»] chr5 (36 HSPs)
chr5 (357-460)||(28625515-28625618)
chr5 (358-460)||(35536881-35536982)
chr5 (357-458)||(13060552-13060653)
chr5 (357-460)||(41419536-41419639)
chr5 (357-460)||(40452425-40452529)
chr5 (357-458)||(12986961-12987065)
chr5 (360-460)||(39154709-39154809)
chr5 (357-460)||(17657277-17657380)
chr5 (357-460)||(24030250-24030352)
chr5 (357-460)||(41059737-41059840)
chr5 (391-460)||(1943064-1943133)
chr5 (357-460)||(12467299-12467406)
chr5 (357-460)||(5559867-5559973)
chr5 (360-460)||(29659098-29659198)
chr5 (357-460)||(29922137-29922240)
chr5 (357-460)||(42852057-42852159)
chr5 (362-460)||(28357181-28357279)
chr5 (355-460)||(1576663-1576768)
chr5 (355-460)||(1608047-1608152)
chr5 (357-460)||(3977510-3977611)
chr5 (364-460)||(27805957-27806053)
chr5 (357-460)||(7364257-7364360)
chr5 (357-456)||(11912054-11912153)
chr5 (357-412)||(41534658-41534713)
chr5 (360-431)||(43319041-43319112)
chr5 (358-460)||(6144774-6144876)
chr5 (357-445)||(1868881-1868969)
chr5 (357-460)||(13625468-13625572)
chr5 (360-460)||(28357390-28357490)
chr5 (357-412)||(31637090-31637145)
chr5 (357-407)||(1473391-1473441)
chr5 (357-431)||(7984140-7984214)
chr5 (366-460)||(40152824-40152918)
chr5 (357-480)||(2878608-2878727)
chr5 (371-412)||(15122593-15122634)
chr5 (416-460)||(35083333-35083377)
[»] chr2 (23 HSPs)
chr2 (358-460)||(4026961-4027063)
chr2 (357-460)||(25836661-25836763)
chr2 (357-460)||(33321260-33321363)
chr2 (357-460)||(36501463-36501566)
chr2 (357-460)||(38216054-38216157)
chr2 (358-460)||(8832493-8832595)
chr2 (357-427)||(12223887-12223957)
chr2 (357-460)||(887447-887550)
chr2 (357-461)||(7480846-7480949)
chr2 (357-460)||(39592284-39592385)
chr2 (357-460)||(4090524-4090627)
chr2 (358-460)||(5903569-5903676)
chr2 (357-460)||(21788492-21788595)
chr2 (357-460)||(23956212-23956315)
chr2 (357-456)||(29774780-29774879)
chr2 (374-460)||(38471739-38471825)
chr2 (360-457)||(11777022-11777119)
chr2 (355-460)||(13056275-13056380)
chr2 (357-460)||(42064886-42064989)
chr2 (357-391)||(11072981-11073015)
chr2 (358-392)||(33321419-33321453)
chr2 (357-406)||(12442848-12442897)
chr2 (357-460)||(5516110-5516214)
[»] chr4 (41 HSPs)
chr4 (359-460)||(36740941-36741042)
chr4 (357-460)||(17222864-17222967)
chr4 (357-460)||(36254984-36255087)
chr4 (357-460)||(48591372-48591475)
chr4 (357-460)||(7148807-7148910)
chr4 (357-460)||(28663608-28663710)
chr4 (372-461)||(22273830-22273919)
chr4 (357-460)||(29877674-29877777)
chr4 (357-460)||(41228938-41229041)
chr4 (357-460)||(46704218-46704321)
chr4 (357-431)||(23335677-23335751)
chr4 (357-411)||(35124422-35124476)
chr4 (363-460)||(18630843-18630940)
chr4 (360-460)||(488332-488432)
chr4 (357-460)||(897005-897108)
chr4 (357-460)||(28074400-28074502)
chr4 (357-460)||(12495592-12495697)
chr4 (398-460)||(34526285-34526347)
chr4 (357-460)||(23297473-23297573)
chr4 (399-460)||(48687011-48687072)
chr4 (360-459)||(2702664-2702763)
chr4 (357-460)||(38345770-38345872)
chr4 (357-460)||(42611817-42611918)
chr4 (374-428)||(15184598-15184652)
chr4 (371-460)||(4603280-4603369)
chr4 (357-442)||(33533963-33534048)
chr4 (384-460)||(9153530-9153606)
chr4 (357-426)||(43699463-43699534)
chr4 (360-428)||(52274100-52274168)
chr4 (385-460)||(11256609-11256684)
chr4 (357-444)||(32628813-32628900)
chr4 (374-460)||(9319100-9319186)
chr4 (398-459)||(2330422-2330483)
chr4 (415-460)||(11298675-11298720)
chr4 (357-412)||(1374358-1374414)
chr4 (360-460)||(8601239-8601339)
chr4 (360-428)||(19725331-19725399)
chr4 (357-413)||(21216323-21216379)
chr4 (360-428)||(39932734-39932802)
chr4 (359-391)||(40699393-40699425)
chr4 (357-453)||(55638036-55638132)
[»] chr7 (22 HSPs)
chr7 (357-460)||(30181585-30181688)
chr7 (357-458)||(14691249-14691350)
chr7 (366-460)||(29378689-29378783)
chr7 (359-460)||(46743991-46744091)
chr7 (360-460)||(47654362-47654462)
chr7 (357-460)||(34922966-34923071)
chr7 (357-458)||(38372593-38372694)
chr7 (357-428)||(17944688-17944759)
chr7 (357-460)||(44613421-44613524)
chr7 (357-460)||(29390499-29390601)
chr7 (360-460)||(43818826-43818927)
chr7 (360-460)||(22032800-22032900)
chr7 (356-425)||(37779265-37779336)
chr7 (357-460)||(39279464-39279568)
chr7 (364-431)||(6406849-6406916)
chr7 (360-431)||(16012736-16012807)
chr7 (357-412)||(20888609-20888664)
chr7 (357-452)||(23356447-23356542)
chr7 (371-413)||(14675955-14675997)
chr7 (357-460)||(47511078-47511183)
chr7 (415-460)||(33204927-33204972)
chr7 (384-461)||(49104315-49104392)
[»] chr8 (21 HSPs)
chr8 (357-460)||(16972304-16972408)
chr8 (361-460)||(32131479-32131578)
chr8 (357-460)||(10298875-10298977)
chr8 (357-460)||(32975722-32975825)
chr8 (357-460)||(34286512-34286614)
chr8 (357-412)||(35168437-35168492)
chr8 (367-454)||(8752851-8752938)
chr8 (357-460)||(24350467-24350570)
chr8 (360-460)||(9131076-9131176)
chr8 (395-460)||(32212963-32213028)
chr8 (357-460)||(35285963-35286066)
chr8 (357-460)||(41145344-41145446)
chr8 (398-460)||(9130965-9131027)
chr8 (366-460)||(36907592-36907686)
chr8 (357-407)||(38895694-38895744)
chr8 (363-460)||(25465795-25465891)
chr8 (371-428)||(37410893-37410950)
chr8 (371-460)||(42363265-42363354)
chr8 (360-460)||(2669686-2669786)
chr8 (384-460)||(10213757-10213833)
chr8 (363-431)||(25333709-25333776)
[»] chr6 (18 HSPs)
chr6 (357-460)||(2255769-2255872)
chr6 (357-431)||(13429490-13429565)
chr6 (360-460)||(10874022-10874122)
chr6 (357-460)||(2027124-2027227)
chr6 (357-460)||(10687345-10687448)
chr6 (357-460)||(32675837-32675940)
chr6 (359-460)||(6758664-6758766)
chr6 (359-425)||(6776845-6776911)
chr6 (357-459)||(8014823-8014925)
chr6 (357-460)||(10755231-10755331)
chr6 (360-460)||(2034177-2034277)
chr6 (369-453)||(9202354-9202438)
chr6 (357-460)||(25430714-25430817)
chr6 (357-460)||(6958659-6958762)
chr6 (357-460)||(23239282-23239385)
chr6 (362-460)||(35071376-35071475)
chr6 (374-428)||(32165241-32165295)
chr6 (415-460)||(9201669-9201714)
[»] scaffold0157 (1 HSPs)
scaffold0157 (357-460)||(24780-24885)
[»] scaffold0057 (1 HSPs)
scaffold0057 (357-460)||(24337-24440)
[»] scaffold0024 (1 HSPs)
scaffold0024 (357-431)||(97186-97257)
[»] scaffold0332 (1 HSPs)
scaffold0332 (357-460)||(14694-14797)
[»] scaffold1367 (1 HSPs)
scaffold1367 (359-428)||(1095-1164)


Alignment Details
Target: chr3 (Bit Score: 105; Significance: 4e-52; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 242528 - 242412
Alignment:
Q  19 atgtttgcatttaaactcaattaaaattgtgtaaacatagagtaatgaattgagagtgtctctctatcatcagagtctaattgtagaatgtgtaccacta 118  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  242528 atgtttgcatttaaactcaattaaaattgtgtaaacatagagtattgaattgacagtgtctctctatcatcagagtctaattgtagaatgtgtaccacta 242429  T
Q  119 gaaatgataaacataaa 135  Q
     ||||||||||||||||    
T  242428 caaatgataaacataaa 242412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 242313 - 242247
Alignment:
Q  143 ttcattctcattacaacaacaacaacctaaaagcaaaatcacaatcaagtcctactcccccttgaag 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  242313 ttcattctcattacaacaacaacaacctaaaagcaaaatcacaatcaagtcctactcccacttgaag 242247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 311 - 372
Target Start/End: Complemental strand, 242151 - 242090
Alignment:
Q  311 aatttcaaacagagcagcaaataaactaagatgatgacaagcacttttcataagcttgtcaa 372  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  242151 aatttcaaacagagcagcaaataaactaagatgataacaaacacttttcataagcttatcaa 242090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 43079985 - 43079882
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||||||||||||| |||||||||||| ||| |||||||||| ||||   | ||||||||||||||  | | |||||| |||||||||||     
T  43079985 ttcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtgattgagaacttatgaattaacttaaaagcttatttatttga 43079886  T
Q  457 ataa 460  Q
    ||||    
T  43079885 ataa 43079882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 40240628 - 40240525
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||| |||| |||||||| |||||||||||  ||| |||||||||| ||||  |||||||| ||||||||  |  ||||||| ||||||||||||    
T  40240628 ttcataagcgtgtctaggtagtttatgaaaaaacaacttatgaagatacaattttcgttagtgagagcttatgaattaagataaaagcttatttatttgc 40240529  T
Q  457 ataa 460  Q
    ||||    
T  40240528 ataa 40240525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 360 - 460
Target Start/End: Complemental strand, 40581125 - 40581024
Alignment:
Q  360 ataagcttgtcaaggtagttaatgaaaaaa-cagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcat 458  Q
    |||||||||||||||||||| ||||||||| |||  || ||||| |||| ||||  |||||||||||||||||  | |||||||  ||||||||||||||    
T  40581125 ataagcttgtcaaggtagtttatgaaaaaaacagcgtatgaagaaacaattttcgttagtgagaacttatgaattaacataaaatcttatttatttgcat 40581026  T
Q  459 aa 460  Q
    ||    
T  40581025 aa 40581024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 357 - 457
Target Start/End: Complemental strand, 22809244 - 22809144
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||||||||||||| |||||||||| | ||| |||||||||| ||||  ||   ||||||||||||  | |||||||  ||||||||||||    
T  22809244 ttcataagcttgtcaaggtagtttatgaaaaaactgcttatgaagatacaattttcgttaagaagaacttatgaattaacataaaaacttatttatttgc 22809145  T
Q  457 a 457  Q
    |    
T  22809144 a 22809144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 357 - 456
Target Start/End: Complemental strand, 34707764 - 34707665
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||| ||||||||| |||||||||||| | | |||||||||| ||||  ||| ||||||||| |||  | |||||||  ||||||||||||    
T  34707764 ttcataagcttgttaaggtagtttatgaaaaaacagctaacgaagatacaattttcgttagcgagaacttacgaattaacataaaaacttatttatttgc 34707665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 357 - 428
Target Start/End: Complemental strand, 53218091 - 53218020
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttat 428  Q
    ||||||||||||||||||||||| |||||||||||  ||  |||||||||| ||||  ||||||||||||||    
T  53218091 ttcataagcttgtcaaggtagtttatgaaaaaacaacttttgaagatacaattttcgttagtgagaacttat 53218020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 359 - 460
Target Start/End: Complemental strand, 45331344 - 45331243
Alignment:
Q  359 cataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcat 458  Q
    ||||||||||| |||  |||| |||||||||||  ||| |||||||||| ||||  |||  ||||| ||||||  | |||||||||||||||||||||||    
T  45331344 cataagcttgttaagacagtttatgaaaaaacatcttatgaagatacaattttcgctagcaagaacatatgaattaacataaaagtttatttatttgcat 45331245  T
Q  459 aa 460  Q
    ||    
T  45331244 aa 45331243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 360 - 460
Target Start/End: Original strand, 37243504 - 37243604
Alignment:
Q  360 ataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcata 459  Q
    |||||||||| || |||||| ||||||||| |||||| |||| ||||  ||||| | |||||||||||||||  |  ||||||| ||| |||||||||||    
T  37243504 ataagcttgttaacgtagtttatgaaaaaatagtttatgaaggtacacttttcattggtgagaacttatgaattaagataaaagcttacttatttgcata 37243603  T
Q  460 a 460  Q
    |    
T  37243604 a 37243604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 3845890 - 3845992
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||||||| ||||| |||| |||||||  || |||||||| | ||||  |||||| ||| ||||||  | |||||||| ||||||||||||    
T  3845890 ttcataagcttgtcaagctagtttatgacaaaacagcatatgaagatac-attttcgctagtgaaaacatatgaattaacataaaagcttatttatttgc 3845988  T
Q  457 ataa 460  Q
    ||||    
T  3845989 ataa 3845992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 10521189 - 10521292
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    |||||||||||||||| |||||| |||||| |||| |||| ||||||| || |||   |||||| ||||||| ||  ||| |||||| || |||||||||    
T  10521189 ttcataagcttgtcaatgtagtttatgaaacaacattttatgaagatataacttttgttagtgaaaacttataaattatcgtaaaagcttgtttatttgc 10521288  T
Q  457 ataa 460  Q
    ||||    
T  10521289 ataa 10521292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 360 - 431
Target Start/End: Complemental strand, 28741262 - 28741191
Alignment:
Q  360 ataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaa 431  Q
    |||||||||| || |||||| |||||||||||| ||| |||| ||||| ||||  |||||||||||||||||    
T  28741262 ataagcttgttaaagtagtttatgaaaaaacagattatgaaggtacaattttcgttagtgagaacttatgaa 28741191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 42956230 - 42956127
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||| |||||| | |||||| |||| ||||||| |||  ||||||||| ||||  |||||||||||||| ||  | |||||||  ||||||||||||    
T  42956230 ttcataaacttgtcgaagtagtttatgataaaacagcttataaagatacaattttcgttagtgagaacttataaattaacataaaaacttatttatttgc 42956131  T
Q  457 ataa 460  Q
    ||||    
T  42956130 ataa 42956127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 357 - 431
Target Start/End: Complemental strand, 3870277 - 3870203
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaa 431  Q
    ||||||||||||||||||||||| |||||||||||   || || ||||||  ||||| || ||||||||||||||    
T  3870277 ttcataagcttgtcaaggtagtttatgaaaaaacaacatatgatgatacacttttcattaatgagaacttatgaa 3870203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 374 - 460
Target Start/End: Original strand, 20685837 - 20685923
Alignment:
Q  374 gtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    |||||| || ||||||||  ||| |||||||||| ||||| |||||||||||| ||||  |||||||||  ||||||||||| ||||    
T  20685837 gtagtttatcaaaaaacaacttatgaagatacaattttcattagtgagaacttgtgaattatcataaaaacttatttatttggataa 20685923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 357 - 431
Target Start/End: Complemental strand, 23816222 - 23816148
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaa 431  Q
    ||||||||||  ||||||||||| |||||||||||| ||| |||||||||| |||    ||||||||||||||||    
T  23816222 ttcataagctattcaaggtagtttatgaaaaaacagcttatgaagatacaactttggtcagtgagaacttatgaa 23816148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 357 - 407
Target Start/End: Complemental strand, 52421192 - 52421142
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaa 407  Q
    ||||||||||||||||||||||| ||||||||| |||| | ||||||||||    
T  52421192 ttcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaa 52421142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 29614242 - 29614299
Alignment:
Q  371 aaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttat 428  Q
    ||||||||| |||||||||||||||| |||||||||| ||||  |||||||| |||||    
T  29614242 aaggtagtttatgaaaaaacagtttatgaagatacaattttcgttagtgagagcttat 29614299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 357 - 457
Target Start/End: Complemental strand, 48597918 - 48597817
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaactt-atgaacaatcataaaagtttatttatttg 455  Q
    |||||||| ||||| |||||||  |||||||||||  ||| |||||||||| ||||   ||||||||||| |||||  | |||||||| |||||||||||    
T  48597918 ttcataagtttgtcgaggtagtgtatgaaaaaacaacttatgaagatacaattttcgtcagtgagaacttaatgaattaacataaaagcttatttatttg 48597819  T
Q  456 ca 457  Q
    ||    
T  48597818 ca 48597817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 357 - 428
Target Start/End: Original strand, 52021281 - 52021353
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatg-aaaaaacagtttaagaagatacaaatttcaatagtgagaacttat 428  Q
    |||||||| |||||||||||||| ||| ||||||||| ||| ||||||| || ||||  ||||||||||||||    
T  52021281 ttcataagattgtcaaggtagtttatgaaaaaaacagcttatgaagatataattttcgttagtgagaacttat 52021353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 10667433 - 10667536
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    |||||||||||||||| |||||| |||||| |||| |||| ||||||| || |||   |||||| |||||||  |  ||| |||||| || |||||||||    
T  10667433 ttcataagcttgtcaatgtagtttatgaaacaacattttatgaagatataacttttgttagtgaaaacttatatattatcgtaaaagcttgtttatttgc 10667532  T
Q  457 ataa 460  Q
    ||||    
T  10667533 ataa 10667536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 381 - 460
Target Start/End: Complemental strand, 17752158 - 17752079
Alignment:
Q  381 atgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    |||||| | ||||||| |||||||||| ||||  |||| ||||||||| ||  | ||||||||||||||||||| |||||    
T  17752158 atgaaagatcagtttatgaagatacaattttcgttagtaagaacttataaattaacataaaagtttatttatttacataa 17752079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 381 - 460
Target Start/End: Complemental strand, 19053478 - 19053399
Alignment:
Q  381 atgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    |||||| | ||||||| |||||||||| ||||  |||| ||||||||| ||  | ||||||||||||||||||| |||||    
T  19053478 atgaaagatcagtttatgaagatacaattttcgttagtaagaacttataaattaacataaaagtttatttatttacataa 19053399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 369 - 431
Target Start/End: Complemental strand, 50022007 - 50021946
Alignment:
Q  369 tcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaa 431  Q
    ||||||||||| |||||||||||| ||| || |||| |||||||| ||||| |||||||||||    
T  50022007 tcaaggtagtttatgaaaaaacagcttatga-gataaaaatttcattagtgggaacttatgaa 50021946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 3645351 - 3645408
Alignment:
Q  371 aaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttat 428  Q
    ||||||||| |||||||||||||| | |||||||||| ||||  |||||||| |||||    
T  3645351 aaggtagtttatgaaaaaacagttcatgaagatacaattttcgttagtgagagcttat 3645408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 460
Target Start/End: Complemental strand, 20174973 - 20174888
Alignment:
Q  375 tagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    ||||| |||||||||||  ||| ||| |||||| ||||  |||| ||| ||||||||  | |||||||| ||||||||||||||||    
T  20174973 tagtttatgaaaaaacaacttatgaatatacaattttcgttagtaagatcttatgaattagcataaaagcttatttatttgcataa 20174888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 360 - 428
Target Start/End: Complemental strand, 1516146 - 1516078
Alignment:
Q  360 ataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttat 428  Q
    ||||| |||| |||||| || ||| |||| |||||||  ||||||||| ||||| ||||||||||||||    
T  1516146 ataagtttgttaaggtattttatggaaaatcagtttataaagatacaattttcattagtgagaacttat 1516078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 10272157 - 10272258
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    |||||||||||  ||||| ||||  ||||||||||| ||| || ||||||||||||  |  | ||||||||||||  | |||| |||||||||| |||||    
T  10272157 ttcataagctt--caaggcagtttctgaaaaaacagcttatgaggatacaaatttcgttcataagaacttatgaattaacatataagtttatttttttgc 10272254  T
Q  457 ataa 460  Q
    ||||    
T  10272255 ataa 10272258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 29830663 - 29830619
Alignment:
Q  384 aaaaaacagtttaagaagatacaaatttcaatagtgagaacttat 428  Q
    ||||||||||||| |||||||||| ||||  ||||||||||||||    
T  29830663 aaaaaacagtttatgaagatacaattttcgttagtgagaacttat 29830619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 8e-26; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 357 - 453
Target Start/End: Complemental strand, 3069905 - 3069809
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatt 453  Q
    ||||||||||||||||||||||| |||||||||||| ||| |||||||||| ||||| |||||||||||||||||  | |||||||| |||||||||    
T  3069905 ttcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcactagtgagaacttatgaattaacataaaagcttatttatt 3069809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 37712102 - 37712205
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||||||||||||| |||||||||||  ||| |||||||||| ||||  |||| ||||||||||||  | |||||||||||||||||||||    
T  37712102 ttcataagcttgtcaaggtagtttatgaaaaaacaacttatgaagatacaactttcgttagtaagaacttatgaattaacataaaagtttatttatttgc 37712201  T
Q  457 ataa 460  Q
    ||||    
T  37712202 ataa 37712205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 6927240 - 6927141
Alignment:
Q  19 atgtttgcatttaaactcaattaaaatt---gtgtaaacatagagtaatgaattgagagtgtctctctatcatcagagtctaattgtagaatgtgtacca 115  Q
    ||||||||||||||||||||||||||||   ||||||||||||||||  ||||||| ||| |||| || |||||||||||||||||||||||||||||||    
T  6927240 atgtttgcatttaaactcaattaaaattttagtgtaaacatagagtatggaattgacagtatctc-ctctcatcagagtctaattgtagaatgtgtacca 6927142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 4068150 - 4068253
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||||||||||||| |||||||||||  ||| |||||||| | ||||  |||||||||||||||||  |  ||||||||||||||||||||    
T  4068150 ttcataagcttgtcaaggtagtttatgaaaaaacaacttatgaagatactattttcgttagtgagaacttatgaattaatataaaagtttatttatttgc 4068249  T
Q  457 ataa 460  Q
    ||||    
T  4068250 ataa 4068253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 48819334 - 48819437
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||||||||||||| |||||||||||| ||| |||||||||  |||   |||||||||||||||||  | |||||||| ||||||||||||    
T  48819334 ttcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacattttttgttagtgagaacttatgaattaacataaaagcttatttatttgc 48819433  T
Q  457 ataa 460  Q
    ||||    
T  48819434 ataa 48819437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 6337807 - 6337704
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||||||||||||| |||||||||||| ||| |||||||||| |||   ||| |||||||||||||  | |||||||| |||||| |||||    
T  6337807 ttcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttagcgagaacttatgaattaacataaaagcttatttgtttgc 6337708  T
Q  457 ataa 460  Q
    ||||    
T  6337707 ataa 6337704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 16889016 - 16888914
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||| ||||||||| |||||||||||| ||| |||||||||| ||||| ||||||||| ||||||   | |||||||| ||||||||||||    
T  16889016 ttcataagcttgt-aaggtagtttatgaaaaaacagcttatgaagatacaattttcattagtgagaatttatgacttaacataaaagcttatttatttgc 16888918  T
Q  457 ataa 460  Q
    ||||    
T  16888917 ataa 16888914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 37329463 - 37329360
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||| ||||||||||||||| |||||||||||| ||| |||||||||| ||||  | |||||||||||| ||  | |||||||| ||||||||||||    
T  37329463 ttcataaacttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttggtgagaacttataaattaacataaaagcttatttatttgc 37329364  T
Q  457 ataa 460  Q
    ||||    
T  37329363 ataa 37329360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 357 - 454
Target Start/End: Complemental strand, 15515398 - 15515301
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttattt 454  Q
    ||||||||||||||||||||||| ||||||||| || ||| |||||||||| ||||  |||||||||||||||||  | ||| |||| ||||||||||    
T  15515398 ttcataagcttgtcaaggtagtttatgaaaaaagagcttatgaagatacaattttcgttagtgagaacttatgaattaacatgaaagcttatttattt 15515301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 26988183 - 26988286
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||||||||||||| |||||||||||| ||| |||||||||| | ||  |||| | ||||||||||  | |||||||| | ||||||||||    
T  26988183 ttcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattgtcgttagtaaaaacttatgaattaacataaaagctaatttatttgc 26988282  T
Q  457 ataa 460  Q
    ||||    
T  26988283 ataa 26988286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 28690039 - 28690142
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    |||||||| |||||||||||||| ||||| |||||| ||| |||||||||| ||| | ||||||||| || ||||  | |||||||| ||||||||||||    
T  28690039 ttcataagtttgtcaaggtagtttatgaacaaacagcttatgaagatacaatttttattagtgagaaattctgaattaacataaaagcttatttatttgc 28690138  T
Q  457 ataa 460  Q
    ||||    
T  28690139 ataa 28690142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 41196761 - 41196658
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    |||||||||||||||| |||||| |||||||||||| ||| |||||||||| |||   |||||||| ||| ||||  | |||||| | ||||||||||||    
T  41196761 ttcataagcttgtcaatgtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgagagcttgtgaattaacataaaggcttatttatttgc 41196662  T
Q  457 ataa 460  Q
    ||||    
T  41196661 ataa 41196658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 357 - 431
Target Start/End: Original strand, 1005375 - 1005449
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaa 431  Q
    |||||||||||||| |||||||||||||||||||   ||| |||||||||| |||  ||||||||||||||||||    
T  1005375 ttcataagcttgtctaggtagttaatgaaaaaactacttatgaagatacaatttttgatagtgagaacttatgaa 1005449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 357 - 431
Target Start/End: Original strand, 35590165 - 35590239
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaa 431  Q
    ||||||||||||||||||| ||| |||||||||||| ||| |||||||||| ||||   ||||||||||||||||    
T  35590165 ttcataagcttgtcaaggttgtttatgaaaaaacagcttatgaagatacaattttcgtcagtgagaacttatgaa 35590239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 363 - 450
Target Start/End: Original strand, 45267506 - 45267594
Alignment:
Q  363 agcttgtcaaggtagttaatgaaaaaa-cagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttattt 450  Q
    ||||||||||||||||| ||||||||| ||| ||| |||||||||| ||||  |||| |||||||||||| || |||||||| ||||||    
T  45267506 agcttgtcaaggtagtttatgaaaaaaacagcttatgaagatacaattttcgttagtaagaacttatgaataaacataaaagcttattt 45267594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 9572835 - 9572732
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    |||||||| |||| ||||||||| ||||||||||| |||| ||||||| |  |||   |||||||||||||||||  |  ||||||| ||||||||||||    
T  9572835 ttcataagtttgttaaggtagtttatgaaaaaacaatttatgaagataaagtttttgttagtgagaacttatgaattaatataaaagcttatttatttgc 9572736  T
Q  457 ataa 460  Q
    ||||    
T  9572735 ataa 9572732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 13038982 - 13039085
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||| ||||||| ||||||||| |||||||||||  ||| ||||||| |  ||||  ||||||||| |||||||  |  ||||||||||||||||||||    
T  13038982 ttcatgagcttgttaaggtagtttatgaaaaaacaacttatgaagataaagttttcgttagtgagaagttatgaattaatataaaagtttatttatttgc 13039081  T
Q  457 ataa 460  Q
    ||||    
T  13039082 ataa 13039085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 361 - 460
Target Start/End: Complemental strand, 26435222 - 26435123
Alignment:
Q  361 taagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    |||| ||||||| |||||| |||||||||| ||||| |||||||||  ||||  || ||||||||||||||  | |||| |||| |||||||||||||||    
T  26435222 taagtttgtcaaagtagtttatgaaaaaactgtttatgaagatacatttttcgttactgagaacttatgaattaacatataagtctatttatttgcataa 26435123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 36423032 - 36422929
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    |||||||| |||| ||||||||| ||||| |||||  ||| ||||||| |||||||  ||||||||| |||| ||  |  ||||||||||||||||||||    
T  36423032 ttcataagtttgttaaggtagtttatgaataaacaacttatgaagataaaaatttcgttagtgagaagttataaaataatataaaagtttatttatttgc 36422933  T
Q  457 ataa 460  Q
    ||||    
T  36422932 ataa 36422929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 374 - 456
Target Start/End: Complemental strand, 14461075 - 14460993
Alignment:
Q  374 gtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    |||||| ||||||||||||||||  ||||||||| ||||| |||||||||||||| ||  | ||||||| ||| |||||||||    
T  14461075 gtagtttatgaaaaaacagtttataaagatacaattttcattagtgagaacttataaattaacataaaaatttgtttatttgc 14460993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 371 - 460
Target Start/End: Original strand, 16708848 - 16708937
Alignment:
Q  371 aaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    ||||| ||| ||||||||||| |||| ||| |||||| ||||| |||| ||| ||||||||  | ||||||| |||||||||||||||||    
T  16708848 aaggttgtttatgaaaaaacaatttatgaatatacaattttcattagtaagatcttatgaattaacataaaaatttatttatttgcataa 16708937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 371 - 460
Target Start/End: Complemental strand, 32497309 - 32497220
Alignment:
Q  371 aaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    ||||||||| |||||||||||||||| || ||||||| ||||  |||||||| ||||| ||  |  |||||||||||||||||| |||||    
T  32497309 aaggtagtttatgaaaaaacagtttatgaggatacaattttcgttagtgagagcttataaattaaaataaaagtttatttatttacataa 32497220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 23544826 - 23544929
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagataca-aatttcaatagtgagaacttatgaacaatcataaaagtttatttatttg 455  Q
    ||||||||||||||||||||||| |||||||||||| ||| ||| |||||   ||||  | ||||||||||| |||  | |||||||| |||||||||||    
T  23544826 ttcataagcttgtcaaggtagtttatgaaaaaacagcttatgaaaatacattttttcgttggtgagaactta-gaattaacataaaagcttatttatttg 23544924  T
Q  456 cataa 460  Q
    |||||    
T  23544925 cataa 23544929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 18317036 - 18317139
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    |||||||| |||||||||||| | |||||||||||   || ||||||||||  |||  || ||||||||||||||  | |||||| ||||||||||| ||    
T  18317036 ttcataagattgtcaaggtaggttatgaaaaaacatcctatgaagatacaatattcgttaatgagaacttatgaatcaacataaacgtttatttattggc 18317135  T
Q  457 ataa 460  Q
    ||||    
T  18317136 ataa 18317139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 357 - 431
Target Start/End: Complemental strand, 26946155 - 26946081
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaa 431  Q
    ||||||||||||| ||||||||| |||||||||||  ||| |||||||||| ||||  |||||| ||||| ||||    
T  26946155 ttcataagcttgttaaggtagtttatgaaaaaacaacttatgaagatacaattttccttagtgacaacttgtgaa 26946081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 460
Target Start/End: Complemental strand, 35282631 - 35282542
Alignment:
Q  371 aaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    ||||||||| |||||||||||  ||| ||||||| || ||| | |||||| ||||||||||  |  |||||||| |||||||||||||||    
T  35282631 aaggtagtttatgaaaaaacaacttatgaagataaaattttaattagtgaaaacttatgaattaatataaaagtctatttatttgcataa 35282542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 360 - 460
Target Start/End: Complemental strand, 46501049 - 46500948
Alignment:
Q  360 ataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaattt-caatagtgagaacttatgaacaatcataaaagtttatttatttgcat 458  Q
    ||||||||||||  |||||| ||||||||| || ||| |||||||||| ||| |  |||||| ||||||| ||  | |||||||| ||||||||||||||    
T  46501049 ataagcttgtcattgtagtttatgaaaaaataggttatgaagatacaattttccgttagtgaaaacttataaatcaacataaaagcttatttatttgcat 46500950  T
Q  459 aa 460  Q
    ||    
T  46500949 aa 46500948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 457
Target Start/End: Original strand, 31249729 - 31249817
Alignment:
Q  369 tcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgca 457  Q
    ||||| ||||| |||| || | |||||| |||||||||| ||||| |||||||||  ||||||  |  |||||||||||||||||||||    
T  31249729 tcaagatagtttatgataagatagtttatgaagatacaattttcattagtgagaatctatgaattaatataaaagtttatttatttgca 31249817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 22593458 - 22593355
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||| || | |||| | |||||| || ||||  ||||||||| |||   |||||||||||||| ||  | |||||||| ||||||||||||    
T  22593458 ttcataagcttgtaaatgcagtttacgaaaaatcactttataaagatacaatttttgttagtgagaacttataaattaacataaaagcttatttatttgc 22593359  T
Q  457 ataa 460  Q
    ||||    
T  22593358 ataa 22593355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 49971289 - 49971352
Alignment:
Q  360 ataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaa 423  Q
    |||||||||| || |||||| |||||||||||| ||| |||||||||| ||||  |||||||||    
T  49971289 ataagcttgttaatgtagtttatgaaaaaacagcttacgaagatacaattttcgttagtgagaa 49971352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 366 - 460
Target Start/End: Complemental strand, 1683943 - 1683849
Alignment:
Q  366 ttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    |||||||||||||| ||||||||||||||||  ||  ||||| ||||  |||  ||||||||||||  | ||| |||| ||||||||| ||||||    
T  1683943 ttgtcaaggtagtttatgaaaaaacagtttataaaactacaattttcgttagcaagaacttatgaattaccatcaaaggttatttattagcataa 1683849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 357 - 391
Target Start/End: Original strand, 39941545 - 39941579
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaaca 391  Q
    |||||||||||||||| ||||||||||||||||||    
T  39941545 ttcataagcttgtcaaagtagttaatgaaaaaaca 39941579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 460
Target Start/End: Original strand, 25485797 - 25485886
Alignment:
Q  371 aaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    ||||||||| ||||||||||| |||| ||||||| || ||||  |||||| || |||| ||  |  |||||| |||||||||||||||||    
T  25485797 aaggtagtttatgaaaaaacaatttatgaagataaaattttcgctagtgaaaatttataaattaatataaaaatttatttatttgcataa 25485886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 456
Target Start/End: Original strand, 41003437 - 41003521
Alignment:
Q  371 aaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||| |||||||| ||| |||  |||||| || ||| | |||||||||||||| ||  | |||||||||||||||||||||    
T  41003437 aaggtagtttatgaaaaa-cagcttactaagatataatttttattagtgagaacttattaattaacataaaagtttatttatttgc 41003521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 3e-25; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 28625515 - 28625618
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||||||||||||| |||||||||||| ||| |||||||||| ||||  |||||||||| ||||||  | |||||||| ||||||||||||    
T  28625515 ttcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtgagaacctatgaattaacataaaagcttatttatttgc 28625614  T
Q  457 ataa 460  Q
    ||||    
T  28625615 ataa 28625618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 358 - 460
Target Start/End: Original strand, 35536881 - 35536982
Alignment:
Q  358 tcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgca 457  Q
    |||||||||||||||| ||||| |||||||||||| ||| |||||||||| ||||  || |||||||||||||| ||| ||||||| |||||||||||||    
T  35536881 tcataagcttgtcaagatagtttatgaaaaaacagcttatgaagatacaattttcgttactgagaacttatgaataat-ataaaagcttatttatttgca 35536979  T
Q  458 taa 460  Q
    |||    
T  35536980 taa 35536982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 357 - 458
Target Start/End: Complemental strand, 13060653 - 13060552
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||||||||||||| |||||||||||| ||| |||| ||| | ||||  |||||||||||||||||  | |||||||| ||||||||||||    
T  13060653 ttcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagttaccattttcgttagtgagaacttatgaattaacataaaagcttatttatttgc 13060554  T
Q  457 at 458  Q
    ||    
T  13060553 at 13060552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 41419536 - 41419639
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||||||||||||| |||||||||||| ||| |||||||||| ||||  |||||||||||||| ||  | |||||||  |||||||||| |    
T  41419536 ttcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtgagaacttatcaattaacataaaaacttatttattttc 41419635  T
Q  457 ataa 460  Q
    ||||    
T  41419636 ataa 41419639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 40452529 - 40452425
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaa-atttcaatagtgagaacttatgaacaatcataaaagtttatttatttg 455  Q
    ||||||||||||||||||||||| ||||| |||||| ||| ||||||| ||  ||||  ||||||||||||||||| || ||||| || |||||||||||    
T  40452529 ttcataagcttgtcaaggtagtttatgaagaaacagcttatgaagatataatttttcgttagtgagaacttatgaataaacataatagcttatttatttg 40452430  T
Q  456 cataa 460  Q
    |||||    
T  40452429 cataa 40452425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 357 - 458
Target Start/End: Complemental strand, 12987065 - 12986961
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaat---cataaaagtttatttatt 453  Q
    ||||||||||||||||||||||| |||||||||||||||| |||| ||| | |||   |||||||||||||||||  ||   |||||||| |||||||||    
T  12987065 ttcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagttaccatttttgttagtgagaacttatgaattattaacataaaagcttatttatt 12986966  T
Q  454 tgcat 458  Q
    |||||    
T  12986965 tgcat 12986961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 360 - 460
Target Start/End: Complemental strand, 39154809 - 39154709
Alignment:
Q  360 ataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcata 459  Q
    |||||||||||||||||||| |||||||||| | ||| |||||| ||| ||| | || ||||||||||||||  | || ||||| |||||||||||||||    
T  39154809 ataagcttgtcaaggtagtttatgaaaaaactgattatgaagatgcaatttttattattgagaacttatgaattaacacaaaagcttatttatttgcata 39154710  T
Q  460 a 460  Q
    |    
T  39154709 a 39154709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 17657277 - 17657380
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    |||||||||||| ||  |||||| |||||||||||  ||| |||||||| | ||||  |||||||||||||||||  | |||||||| ||||||||||||    
T  17657277 ttcataagcttgccattgtagtttatgaaaaaacatcttatgaagatacgattttcgttagtgagaacttatgaattaacataaaaggttatttatttgc 17657376  T
Q  457 ataa 460  Q
    ||||    
T  17657377 ataa 17657380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 24030250 - 24030352
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    |||||||||||||||| |||||| ||||||||||| ||   || ||||||| ||||  |||||||||||||||||  | |||||||| ||||||||||||    
T  24030250 ttcataagcttgtcaaagtagtttatgaaaaaacacttgc-gaggatacaattttcgttagtgagaacttatgaattaacataaaagcttatttatttgc 24030348  T
Q  457 ataa 460  Q
    ||||    
T  24030349 ataa 24030352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 41059840 - 41059737
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||| ||||||| ||| |||||||| ||  ||| |||||| ||| ||||  |||||||||||||||||  | |||||||| ||||||||||||    
T  41059840 ttcataagcttatcaaggttgtttatgaaaaatcaccttatgaagattcaattttcgttagtgagaacttatgaattaacataaaagcttatttatttgc 41059741  T
Q  457 ataa 460  Q
    ||||    
T  41059740 ataa 41059737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 391 - 460
Target Start/End: Original strand, 1943064 - 1943133
Alignment:
Q  391 agtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    |||||| |||||||||| ||||| |||||||||||||||||  | |||||||| ||||||||||||||||    
T  1943064 agtttatgaagatacaattttcattagtgagaacttatgaattagcataaaagcttatttatttgcataa 1943133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 12467299 - 12467406
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatg-aaaaaacagtttaagaagatacaaatttcaatagtgagaacttatga---acaatcataaaagtttatttat 452  Q
    ||||||||||||||||||||||| ||| ||||||||| ||| ||||| |||| |||   ||||||||||||||||   || | |||||||| ||||||||    
T  12467299 ttcataagcttgtcaaggtagtttatgaaaaaaacagcttatgaagagacaatttttgttagtgagaacttatgaattactaacataaaagcttatttat 12467398  T
Q  453 ttgcataa 460  Q
    ||||||||    
T  12467399 ttgcataa 12467406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 5559973 - 5559867
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaa---cagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatt 453  Q
    |||||||||| |||||||||||| |||||||||   ||| ||| |||||||||| ||||  ||||||||| |||||||    |||||||| |||||||||    
T  5559973 ttcataagctcgtcaaggtagtttatgaaaaaaaagcagcttatgaagatacaattttcgttagtgagaatttatgaatttacataaaagcttatttatt 5559874  T
Q  454 tgcataa 460  Q
    |||||||    
T  5559873 tgcataa 5559867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 360 - 460
Target Start/End: Original strand, 29659098 - 29659198
Alignment:
Q  360 ataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcata 459  Q
    |||||||||| || |||||| | |||||||||||||| |||  ||||| ||||| |||||||||||||||||  |  ||||||  |||||||||||||||    
T  29659098 ataagcttgttaatgtagtttaagaaaaaacagtttatgaaagtacaattttcattagtgagaacttatgaattaagataaaaacttatttatttgcata 29659197  T
Q  460 a 460  Q
    |    
T  29659198 a 29659198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 29922240 - 29922137
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||||||||||||| ||||||| |||| ||| | | |||||| |||   |||||||| ||||||||  |  ||||||| ||||||||||||    
T  29922240 ttcataagcttgtcaaggtagtttatgaaaacacagcttatgcatatacaattttttttagtgagagcttatgaattaatataaaagcttatttatttgc 29922141  T
Q  457 ataa 460  Q
    ||||    
T  29922140 ataa 29922137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 42852057 - 42852159
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||||||| ||||| |||||||||||  || | || |||||| ||||  |||||||||||||||||  | |||||||| ||||||| ||||    
T  42852057 ttcataagcttgtcaagatagtttatgaaaaaacaactt-ataaaatacaattttcgttagtgagaacttatgaattaacataaaagcttatttagttgc 42852155  T
Q  457 ataa 460  Q
    ||||    
T  42852156 ataa 42852159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 362 - 460
Target Start/End: Original strand, 28357181 - 28357279
Alignment:
Q  362 aagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    ||||||||||| |||||| |||||||||||| ||| |||||||||| ||||  ||  || ||||||| ||  | |||||||| ||||||||||||||||    
T  28357181 aagcttgtcaatgtagtttatgaaaaaacaggttatgaagatacaattttcgttaacgaaaacttataaattaacataaaagcttatttatttgcataa 28357279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 355 - 460
Target Start/End: Original strand, 1576663 - 1576768
Alignment:
Q  355 ttttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttattt 454  Q
    |||||||||||||||||| |||||| ||| |||||||  ||  |||||||||| |||   ||||||||||||| |||  | ||||||| | |||||||||    
T  1576663 ttttcataagcttgtcaatgtagtttatggaaaaacaacttgtgaagatacaatttttgttagtgagaacttaagaattaacataaaactgtatttattt 1576762  T
Q  455 gcataa 460  Q
    ||||||    
T  1576763 gcataa 1576768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 355 - 460
Target Start/End: Complemental strand, 1608152 - 1608047
Alignment:
Q  355 ttttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttattt 454  Q
    |||||||||||||||||| |||||| ||| |||||||  ||  |||||||||| |||   ||||||||||||| |||  | ||||||| | |||||||||    
T  1608152 ttttcataagcttgtcaatgtagtttatggaaaaacaacttgtgaagatacaatttttgttagtgagaacttaagaattaacataaaactgtatttattt 1608053  T
Q  455 gcataa 460  Q
    ||||||    
T  1608052 gcataa 1608047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 3977510 - 3977611
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||||||||||||| |||||||||||||||| |   ||  || |||   |||||||||| ||||||  | |||||||| ||||||||||||    
T  3977510 ttcataagcttgtcaaggtagtttatgaaaaaacagtttatg--tatctaacttttgttagtgagaacgtatgaattaacataaaagcttatttatttgc 3977607  T
Q  457 ataa 460  Q
    ||||    
T  3977608 ataa 3977611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 364 - 460
Target Start/End: Original strand, 27805957 - 27806053
Alignment:
Q  364 gcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    ||||||||| |||||| |||||||||||  |||  ||||||||| |||   |||||| ||||||| ||  | |||||||||||||||||||||||||    
T  27805957 gcttgtcaatgtagtttatgaaaaaacatgttataaagatacaatttttgttagtgaaaacttataaattaacataaaagtttatttatttgcataa 27806053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 7364360 - 7364257
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||| ||||||||| || || |||||  ||| ||||||||||  ||   |||||||||||||||||  |  ||||||| ||||||||||||    
T  7364360 ttcataagcttgttaaggtagtttatcaacaaacaacttatgaagatacaatatttgttagtgagaacttatgaattaatataaaagcttatttatttgc 7364261  T
Q  457 ataa 460  Q
    ||||    
T  7364260 ataa 7364257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 357 - 456
Target Start/End: Complemental strand, 11912153 - 11912054
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||| |||||||| ||||||  |||||||| || ||| |||||||||| |||   |||||||||||||||||  | ||| |||| ||||||||||||    
T  11912153 ttcataatcttgtcaaagtagtttgtgaaaaaagagcttatgaagatacaatttttgttagtgagaacttatgaattaacatgaaagcttatttatttgc 11912054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 357 - 412
Target Start/End: Original strand, 41534658 - 41534713
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttc 412  Q
    ||||||||||||||||||||||| | |||||||||| ||| |||||||||| ||||    
T  41534658 ttcataagcttgtcaaggtagtttacgaaaaaacagcttatgaagatacaattttc 41534713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 360 - 431
Target Start/End: Original strand, 43319041 - 43319112
Alignment:
Q  360 ataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaa 431  Q
    |||||||||| || |||||| |||||||||||||||| |||| || || ||||  |||||||||||||||||    
T  43319041 ataagcttgttaatgtagtttatgaaaaaacagtttatgaaggtataattttcgttagtgagaacttatgaa 43319112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 358 - 460
Target Start/End: Original strand, 6144774 - 6144876
Alignment:
Q  358 tcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgca 457  Q
    ||||||||||||||||||| || ||||||||| || ||| ||| |||||| |||   ||| |||||||||||||  |  ||||||| || ||||||||||    
T  6144774 tcataagcttgtcaaggtattttatgaaaaaatagcttatgaatatacaatttttgttagcgagaacttatgaattaatataaaagcttgtttatttgca 6144873  T
Q  458 taa 460  Q
    |||    
T  6144874 taa 6144876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 357 - 445
Target Start/End: Original strand, 1868881 - 1868969
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtt 445  Q
    |||| |||||||||||||||||| |||||||| ||  ||| |||||||||| ||||  |||||||||| ||| ||  | ||||||||||    
T  1868881 ttcacaagcttgtcaaggtagtttatgaaaaatcaacttatgaagatacaattttcgttagtgagaacgtatcaattaacataaaagtt 1868969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 13625572 - 13625468
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatga-aaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttg 455  Q
    |||||||||||||  |||||||| |||| |||||||| |||  |||||| || ||||  |||||| ||||||| ||  |  |||||||||||||||||||    
T  13625572 ttcataagcttgttgaggtagtttatgataaaaacagcttataaagataaaattttcgttagtgaaaacttataaattaatataaaagtttatttatttg 13625473  T
Q  456 cataa 460  Q
    |||||    
T  13625472 cataa 13625468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 360 - 460
Target Start/End: Original strand, 28357390 - 28357490
Alignment:
Q  360 ataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcata 459  Q
    ||||| |||| || |||||| |||||||||||||||| |||| | ||| ||||  ||||||||||||| |||  |  ||||||  |||||||||||||||    
T  28357390 ataagtttgttaatgtagtttatgaaaaaacagtttatgaaggtccaattttcgttagtgagaacttacgaattaagataaaaacttatttatttgcata 28357489  T
Q  460 a 460  Q
    |    
T  28357490 a 28357490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 412
Target Start/End: Complemental strand, 31637145 - 31637090
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttc 412  Q
    |||||||||||||||||||| || |||||| ||||| ||| |||||||||| ||||    
T  31637145 ttcataagcttgtcaaggtaatttatgaaagaacagcttatgaagatacaattttc 31637090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 357 - 407
Target Start/End: Original strand, 1473391 - 1473441
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaa 407  Q
    ||||||||||||||||| || || |||||||||||| ||| ||||||||||    
T  1473391 ttcataagcttgtcaagttaatttatgaaaaaacagcttatgaagatacaa 1473441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 357 - 431
Target Start/End: Original strand, 7984140 - 7984214
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaa 431  Q
    |||||||| ||||||| || |||   ||||||||||||||  ||||||||| |||||  ||||||||||||||||    
T  7984140 ttcataagtttgtcaaagttgtttgagaaaaaacagtttacaaagatacaattttcataagtgagaacttatgaa 7984214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 366 - 460
Target Start/End: Complemental strand, 40152918 - 40152824
Alignment:
Q  366 ttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    |||| ||| ||||| ||||||||||| |||| ||||||| || ||||  |  ||||||||||||||  |  ||||||| ||||||||||||||||    
T  40152918 ttgttaagatagtttatgaaaaaacaatttatgaagataaaattttcgttcttgagaacttatgaattaatataaaagattatttatttgcataa 40152824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 480
Target Start/End: Complemental strand, 2878727 - 2878608
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    |||||||| ||||||| || ||| |||||| ||||||||| |||||||||| |||   |||||| ||||| | ||  | |||||||| |||||||||| |    
T  2878727 ttcataagtttgtcaatgtggtttatgaaacaacagttta-gaagatacaatttttgttagtgaaaacttttaaattaacataaaagcttatttatttac 2878629  T
Q  457 ataataaactattttttcataagc 480  Q
    ||||    ||||||||||||||||    
T  2878628 ataag---ctattttttcataagc 2878608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 412
Target Start/End: Original strand, 15122593 - 15122634
Alignment:
Q  371 aaggtagttaatgaaaaaacagtttaagaagatacaaatttc 412  Q
    ||||||||| |||||||||||||||| |||||||||| ||||    
T  15122593 aaggtagtttatgaaaaaacagtttatgaagatacaattttc 15122634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 416 - 460
Target Start/End: Original strand, 35083333 - 35083377
Alignment:
Q  416 agtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    ||||||||||||||||  | |||||||| ||||||||||||||||    
T  35083333 agtgagaacttatgaattaacataaaagcttatttatttgcataa 35083377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 3e-22; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 358 - 460
Target Start/End: Original strand, 4026961 - 4027063
Alignment:
Q  358 tcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgca 457  Q
    |||||||||||||||||||||| |||||||||||| ||| |||||||||| |||   |||||||||||||||||  | ||||| || |||||||||||||    
T  4026961 tcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgagaacttatgaattaacataatagcttatttatttgca 4027060  T
Q  458 taa 460  Q
    |||    
T  4027061 taa 4027063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 25836763 - 25836661
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||||||||||||| |||||||||| | ||| ||||| |||| | ||  ||||||||||||||||| || |||||||| ||||||||||||    
T  25836763 ttcataagcttgtcaaggtagtttatgaaaaaacggcttatgaagacacaattatcgttagtgagaacttatgaataa-cataaaagcttatttatttgc 25836665  T
Q  457 ataa 460  Q
    ||||    
T  25836664 ataa 25836661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 33321363 - 33321260
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||||||||||||| |||||||||||| ||| |||||||||| |||   |||||||| ||| ||||  | |||||| ||||||||||||||    
T  33321363 ttcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgagagcttgtgaattaacataaaggtttatttatttgc 33321264  T
Q  457 ataa 460  Q
    ||||    
T  33321263 ataa 33321260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 36501566 - 36501463
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||||||||||||| |||||||||||| ||| ||||||| || || |  ||||||||||| |||||  | |||||||| ||||||||||||    
T  36501566 ttcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagataaaatttgcgttagtgagaactcatgaattaacataaaagcttatttatttgc 36501467  T
Q  457 ataa 460  Q
    ||||    
T  36501466 ataa 36501463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 38216054 - 38216157
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||||||||||||| | ||||||| ||  || |||||||||| ||||  ||||||||||||||||   | |||||||| ||||||||||||    
T  38216054 ttcataagcttgtcaaggtagtttaggaaaaaatagcatatgaagatacaattttcgttagtgagaacttatgagttaacataaaagcttatttatttgc 38216153  T
Q  457 ataa 460  Q
    ||||    
T  38216154 ataa 38216157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 358 - 460
Target Start/End: Original strand, 8832493 - 8832595
Alignment:
Q  358 tcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgca 457  Q
    |||||||||| ||||||||||| ||||||| |||| |||  ||||||||| ||||  |||||| ||||||||||  | |||||||| |||||||||||||    
T  8832493 tcataagcttttcaaggtagtttatgaaaacacaggttagaaagatacaattttcgttagtgaaaacttatgaattaacataaaagcttatttatttgca 8832592  T
Q  458 taa 460  Q
    |||    
T  8832593 taa 8832595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 357 - 427
Target Start/End: Original strand, 12223887 - 12223957
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaactta 427  Q
    ||||||||| ||||||||||||| |||||||||||||||| |||||||| | ||||| |||||||||||||    
T  12223887 ttcataagcctgtcaaggtagtttatgaaaaaacagtttatgaagataccattttcattagtgagaactta 12223957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 887447 - 887550
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||||||||||||| ||| |||| | | ||| |||||||||| ||||| |||  ||||||||||||  | |||||||| |||| |||||||    
T  887447 ttcataagcttgtcaaggtagtttatgtaaaacctgcttatgaagatacaattttcattagcaagaacttatgaattaacataaaagcttatctatttgc 887546  T
Q  457 ataa 460  Q
    ||||    
T  887547 ataa 887550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 357 - 461
Target Start/End: Complemental strand, 7480949 - 7480846
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    |||||||| |||| ||||||||| || ||||||||  ||| |||||||||| ||||| |||| ||||||||||||  | |||||||  ||||||||||||    
T  7480949 ttcataagtttgtgaaggtagtttat-aaaaaacaacttaggaagatacaattttcattagtcagaacttatgaattaacataaaaacttatttatttgc 7480851  T
Q  457 ataat 461  Q
    |||||    
T  7480850 ataat 7480846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 39592284 - 39592385
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||||||||||||| ||||||| | || ||||||||||| || ||||  ||||||||| ||||||| ||  | ||||| |||||| |||||    
T  39592284 ttcataagcttgtcaaggtagtttatgaaaataaagcttaagaagatataattttctttagtgagaatttatgaataa--acaaaagcttatttctttgc 39592381  T
Q  457 ataa 460  Q
    ||||    
T  39592382 ataa 39592385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 4090524 - 4090627
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||| |||||||||||||| ||||||||||||| ||| |||||||||| ||||  ||  |||||||||||||  | || || |  ||||||||||||    
T  4090524 ttcataatcttgtcaaggtagtcaatgaaaaaacagcttacgaagatacaattttcgttaccgagaacttatgaattaacacaacaacttatttatttgc 4090623  T
Q  457 ataa 460  Q
    ||||    
T  4090624 ataa 4090627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 358 - 460
Target Start/End: Original strand, 5903569 - 5903676
Alignment:
Q  358 tcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatag-----tgagaacttatgaacaatcataaaagtttatttat 452  Q
    ||||||||||||||| ||||||||||||||||||  ||| |||||||||| |||   |||     |||||||||| ||| || |||||||| ||||||||    
T  5903569 tcataagcttgtcaaagtagttaatgaaaaaacatcttatgaagatacaatttttgttagtgagatgagaacttaagaataaacataaaagcttatttat 5903668  T
Q  453 ttgcataa 460  Q
    ||||||||    
T  5903669 ttgcataa 5903676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 21788492 - 21788595
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||| ||| ||||| |||||||||||  ||| ||||||| || ||||  |||||||| ||||||||  |  ||||||| ||||||||||||    
T  21788492 ttcataagcttgttaagatagtttatgaaaaaacaacttatgaagataaaattttcgttagtgagagcttatgaattaatataaaagcttatttatttgc 21788591  T
Q  457 ataa 460  Q
    ||||    
T  21788592 ataa 21788595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 23956315 - 23956212
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    |||||||| |||| || |||||| ||| ||||||||||||  ||||||||| ||||  || ||||||||||| ||  | |||||||  ||||||||||||    
T  23956315 ttcataagtttgtaaatgtagtttatggaaaaacagtttataaagatacaattttcgttaatgagaacttataaattaacataaaaacttatttatttgc 23956216  T
Q  457 ataa 460  Q
    ||||    
T  23956215 ataa 23956212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 357 - 456
Target Start/End: Original strand, 29774780 - 29774879
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||| || |||| ||||||||| |||||||||| | ||| ||| |||||| ||||  |||||||||||||||||  | | |||||| ||||||||||||    
T  29774780 ttcattagtttgttaaggtagtttatgaaaaaacggcttatgaaaatacaattttcgttagtgagaacttatgaattaacgtaaaagcttatttatttgc 29774879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 374 - 460
Target Start/End: Complemental strand, 38471825 - 38471739
Alignment:
Q  374 gtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    |||||| |||||||||||||||| |||| ||||| ||||  |||||||||||||||||  |  |||| | |||||||||||| ||||    
T  38471825 gtagtttatgaaaaaacagtttatgaaggtacaattttcgttagtgagaacttatgaattaagataacaatttatttatttgtataa 38471739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 360 - 457
Target Start/End: Original strand, 11777022 - 11777119
Alignment:
Q  360 ataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgca 457  Q
    |||||||||| ||| ||||| ||||||| |||| ||| |||||||||  |||   |||||||||||||| ||| | |||||||  |||||||||||||    
T  11777022 ataagcttgttaagttagtttatgaaaacacagcttatgaagatacactttttgttagtgagaacttataaactaacataaaaccttatttatttgca 11777119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 355 - 460
Target Start/End: Complemental strand, 13056380 - 13056275
Alignment:
Q  355 ttttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttattt 454  Q
    ||||||||||||||||||||||||| || |||||| || ||| |||||| ||| ||||  ||  |||||||||||||  | ||| |||| |||| |||||    
T  13056380 ttttcataagcttgtcaaggtagtttataaaaaaatagcttatgaagatgcaattttcgttaacgagaacttatgaattaacattaaagcttatctattt 13056281  T
Q  455 gcataa 460  Q
    | ||||    
T  13056280 gtataa 13056275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 42064886 - 42064989
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||| ||||||||| || |||||| |  ||| |||||||  | ||||  |||| ||||||||||||  |  ||||||| ||||||||||||    
T  42064886 ttcataagcttgttaaggtagtttataaaaaaataacttatgaagatatcattttcgttagtaagaacttatgaattaatataaaagcttatttatttgc 42064985  T
Q  457 ataa 460  Q
    ||||    
T  42064986 ataa 42064989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 357 - 391
Target Start/End: Original strand, 11072981 - 11073015
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaaca 391  Q
    ||||||||||||||||||||||| |||||||||||    
T  11072981 ttcataagcttgtcaaggtagtttatgaaaaaaca 11073015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 358 - 392
Target Start/End: Complemental strand, 33321453 - 33321419
Alignment:
Q  358 tcataagcttgtcaaggtagttaatgaaaaaacag 392  Q
    |||||||||||||||||||||| ||||||||||||    
T  33321453 tcataagcttgtcaaggtagtttatgaaaaaacag 33321419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 406
Target Start/End: Original strand, 12442848 - 12442897
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagataca 406  Q
    ||||||||||||||||| ||||| |||||||| ||| ||| |||||||||    
T  12442848 ttcataagcttgtcaagatagtttatgaaaaagcagcttatgaagataca 12442897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 5516110 - 5516214
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaa-aacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttg 455  Q
    |||||||| |||| || |||||| ||||||| |||||||||  || |||||| ||||  |||||||| ||||| ||  | || ||||| |||||||||||    
T  5516110 ttcataagtttgtaaatgtagtttatgaaaaaaacagtttataaaaatacaattttcgttagtgagagcttataaattaacacaaaagcttatttatttg 5516209  T
Q  456 cataa 460  Q
    |||||    
T  5516210 cataa 5516214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 1e-21; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 359 - 460
Target Start/End: Original strand, 36740941 - 36741042
Alignment:
Q  359 cataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcat 458  Q
    |||||||||||||| |||||| ||||||| |||||| | |||||||||| ||||| |||||||||||||||||  | || ||||| ||||||||||||||    
T  36740941 cataagcttgtcaaagtagtttatgaaaatacagttcatgaagatacaattttcattagtgagaacttatgaatcaacacaaaagcttatttatttgcat 36741040  T
Q  459 aa 460  Q
    ||    
T  36741041 aa 36741042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 17222864 - 17222967
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||||||||||||| |||||||||||| ||| |||||||||| ||||  |||| ||||||||||||  | |||||||  |||||||||||     
T  17222864 ttcataagcttgtcaaggtagtttatgaaaaaacagattatgaagatacaattttcgttagttagaacttatgaattaacataaaaacttatttatttga 17222963  T
Q  457 ataa 460  Q
    ||||    
T  17222964 ataa 17222967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 36255087 - 36254984
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    |||||||||||||||| ||||||  ||||||||||| ||| |||||||||| ||| | |||||||||||||||||  | |||||||| |||||||| |||    
T  36255087 ttcataagcttgtcaacgtagtttgtgaaaaaacagcttatgaagatacaattttaattagtgagaacttatgaattaacataaaagcttatttatctgc 36254988  T
Q  457 ataa 460  Q
    ||||    
T  36254987 ataa 36254984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 48591475 - 48591372
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    |||||| |||||||||||||||| |||||||||||| ||| |||||||||| ||||  || ||||||||||||||  | | |||||| ||||||||||||    
T  48591475 ttcatacgcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttaatgagaacttatgaattaacgtaaaagcttatttatttgc 48591376  T
Q  457 ataa 460  Q
    ||||    
T  48591375 ataa 48591372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 7148807 - 7148910
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    |||||||||||||||||||||||  ||||||||||| |||  || |||||| ||||  |||| ||||||||||||  | |||||||| ||||||||||||    
T  7148807 ttcataagcttgtcaaggtagtttttgaaaaaacagcttataaaaatacaattttctttagtcagaacttatgaattagcataaaagcttatttatttgc 7148906  T
Q  457 ataa 460  Q
    ||||    
T  7148907 ataa 7148910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 28663608 - 28663710
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||||||||||||| |||||||||||| ||  |||||||||| ||||  || ||||||||||||||| | |||||||| ||| ||| ||||    
T  28663608 ttcataagcttgtcaaggtagtttatgaaaaaacagattctgaagatacaattttcgtta-tgagaacttatgaactaacataaaagcttaattagttgc 28663706  T
Q  457 ataa 460  Q
    ||||    
T  28663707 ataa 28663710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 372 - 461
Target Start/End: Original strand, 22273830 - 22273919
Alignment:
Q  372 aggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataat 461  Q
    |||||||| |||||||||||| ||| |||||||||| |||   ||||||||| |||||||  | ||||||||||||||||||||||||||    
T  22273830 aggtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgagaagttatgaattaacataaaagtttatttatttgcataat 22273919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 29877674 - 29877777
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||  ||||||||| |||||||| ||| ||| |||||||||| |||   |||||||||||||||||  | |||||||| |||| |||||||    
T  29877674 ttcataagcttgctaaggtagtttatgaaaaagcagcttatgaagatacaatttttgttagtgagaacttatgaattaacataaaagcttatatatttgc 29877773  T
Q  457 ataa 460  Q
    ||||    
T  29877774 ataa 29877777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 41228938 - 41229041
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||| ||||||||| |||||||||||  | | |||||||||| ||||| |||| ||||||||||||  |  ||||||| | ||||||||||    
T  41228938 ttcataagcttgttaaggtagtttatgaaaaaacaactgatgaagatacaattttcattagttagaacttatgaattaatataaaagctaatttatttgc 41229037  T
Q  457 ataa 460  Q
    ||||    
T  41229038 ataa 41229041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 46704321 - 46704218
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||| ||||||| ||||||||| |||||||||||| ||| ||||||| || ||||| |||||||||||||||||  |  ||||||  ||| ||||||||    
T  46704321 ttcatgagcttgttaaggtagtttatgaaaaaacagcttatgaagataaaattttcattagtgagaacttatgaattaatataaaaagttacttatttgc 46704222  T
Q  457 ataa 460  Q
    ||||    
T  46704221 ataa 46704218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 357 - 431
Target Start/End: Original strand, 23335677 - 23335751
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaa 431  Q
    ||||||||| | ||||||||||| |||||||||||| ||| |||||||||| |||||  ||||||||||||||||    
T  23335677 ttcataagcatatcaaggtagtttatgaaaaaacagcttatgaagatacaattttcataagtgagaacttatgaa 23335751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 357 - 411
Target Start/End: Original strand, 35124422 - 35124476
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaattt 411  Q
    ||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||    
T  35124422 ttcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaaattt 35124476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 363 - 460
Target Start/End: Complemental strand, 18630940 - 18630843
Alignment:
Q  363 agcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    ||||||| ||||||||| |||||||||||| ||| ||||||| |  ||||  |||||||||||||||||  |  ||||||| ||||||||||||||||    
T  18630940 agcttgttaaggtagtttatgaaaaaacagcttatgaagataaagttttcgttagtgagaacttatgaattaatataaaagcttatttatttgcataa 18630843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 360 - 460
Target Start/End: Complemental strand, 488432 - 488332
Alignment:
Q  360 ataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcata 459  Q
    |||||||||||||||||||| |||||||||  | ||   ||||||||| ||| | |||||||||||||||||  | |||||||| |||||||||| ||||    
T  488432 ataagcttgtcaaggtagtttatgaaaaaattgcttgtaaagatacaatttttattagtgagaacttatgaattaacataaaagcttatttatttccata 488333  T
Q  460 a 460  Q
    |    
T  488332 a 488332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 897005 - 897108
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    |||||||||||||||| |||||| ||||||||||| |||| | |||||| | ||||  |||||| ||||||| ||  |  ||||||| ||||||||||||    
T  897005 ttcataagcttgtcaatgtagtttatgaaaaaacaatttacgtagatacgattttcgttagtgaaaacttataaattaatataaaagcttatttatttgc 897104  T
Q  457 ataa 460  Q
    ||||    
T  897105 ataa 897108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 28074400 - 28074502
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||||||||||||| ||||||||| || ||| |||||||||| ||||  ||| || ||||| ||||  | |||||||  ||||||||||||    
T  28074400 ttcataagcttgtcaaggtagtttatgaaaaaa-agcttatgaagatacaattttcgttagcgaaaacttgtgaaataacataaaatcttatttatttgc 28074498  T
Q  457 ataa 460  Q
    ||||    
T  28074499 ataa 28074502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 12495697 - 12495592
Alignment:
Q  357 ttcataagcttgtcaa--ggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttattt 454  Q
    ||||||||||||||||  ||||||| |||||||||||| | |  |||||||||  |||| |||||||||||||| ||  | |||||||  ||||||||||    
T  12495697 ttcataagcttgtcaaaaggtagtttatgaaaaaacagctaatcaagatacaatattcattagtgagaacttataaattaacataaaaacttatttattt 12495598  T
Q  455 gcataa 460  Q
    ||||||    
T  12495597 gcataa 12495592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 398 - 460
Target Start/End: Complemental strand, 34526347 - 34526285
Alignment:
Q  398 gaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    |||||||||| |||| ||||||||||||||||||  | |||||||| ||||||||||||||||    
T  34526347 gaagatacaattttccatagtgagaacttatgaattaacataaaagcttatttatttgcataa 34526285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 23297473 - 23297573
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    |||||||| |||||||||||||| ||||||   ||| ||| |||||||||| |||   ||| |||||||||||||  | |||||||| ||||||||||||    
T  23297473 ttcataagtttgtcaaggtagtttatgaaa---cagcttatgaagatacaatttttgttagcgagaacttatgaattagcataaaagcttatttatttgc 23297569  T
Q  457 ataa 460  Q
    ||||    
T  23297570 ataa 23297573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 399 - 460
Target Start/End: Original strand, 48687011 - 48687072
Alignment:
Q  399 aagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    ||||||||| ||||| |||||||||||||||||  | |||| ||||||||||||||||||||    
T  48687011 aagatacaattttcattagtgagaacttatgaattaacatataagtttatttatttgcataa 48687072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 360 - 459
Target Start/End: Complemental strand, 2702763 - 2702664
Alignment:
Q  360 ataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcata 459  Q
    ||||| |||| ||||||||||||||||| |||  ||| ||| |||||| ||||| |||| ||| ||||||||  | |||||||| ||| |||||||||||    
T  2702763 ataagtttgttaaggtagttaatgaaaagacaacttatgaatatacaattttcattagtaagatcttatgaattaacataaaagcttaattatttgcata 2702664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 38345872 - 38345770
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    |||||||| ||||||| |||||| |||||||||||  ||| |||||||||| ||| | |||  ||||||||||||  | |||||||| |||||||||| |    
T  38345872 ttcataag-ttgtcaaagtagtttatgaaaaaacaacttatgaagatacaatttttattagccagaacttatgaattaacataaaagcttatttatttac 38345774  T
Q  457 ataa 460  Q
    ||||    
T  38345773 ataa 38345770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 42611918 - 42611817
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    |||||||||||||| || ||||| |||||||||||  ||| |||||||||  ||||  |||||| ||||||||||  | |||||||| ||||||||||||    
T  42611918 ttcataagcttgtcgag-tagtttatgaaaaaacaacttatgaagatacagttttcg-tagtgacaacttatgaattaacataaaagcttatttatttgc 42611821  T
Q  457 ataa 460  Q
    ||||    
T  42611820 ataa 42611817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 374 - 428
Target Start/End: Original strand, 15184598 - 15184652
Alignment:
Q  374 gtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttat 428  Q
    |||||| |||||||||||||||| |||||||||| ||||  ||||||||||||||    
T  15184598 gtagtttatgaaaaaacagtttatgaagatacaattttcgttagtgagaacttat 15184652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 460
Target Start/End: Complemental strand, 4603369 - 4603280
Alignment:
Q  371 aaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    ||||||||| |||||||||||||||| |||||||||| ||||  ||||||||  |||| ||  |  ||||||| |||||||||| |||||    
T  4603369 aaggtagtttatgaaaaaacagtttatgaagatacaattttcgttagtgagagtttataaattaaaataaaagcttatttatttacataa 4603280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 357 - 442
Target Start/End: Original strand, 33533963 - 33534048
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaa 442  Q
    |||||||| | |||||||||||| ||||||||||||   | ||| |||||| ||||  |||||||||||||||||| | |||||||    
T  33533963 ttcataagttagtcaaggtagtttatgaaaaaacagcccacgaatatacaattttcgttagtgagaacttatgaactaacataaaa 33534048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 460
Target Start/End: Complemental strand, 9153606 - 9153530
Alignment:
Q  384 aaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    |||||||||||||  || |||||| |||||  |||||||| |||| ||  | |||||||||||||||||||||||||    
T  9153606 aaaaaacagtttattaaaatacaattttcatcagtgagaatttataaattaacataaaagtttatttatttgcataa 9153530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 357 - 426
Target Start/End: Complemental strand, 43699534 - 43699463
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacag--tttaagaagatacaaatttcaatagtgagaactt 426  Q
    |||||||||||||||| |||||| ||||||||||||   ||| |||||||||| ||||| ||||| ||||||    
T  43699534 ttcataagcttgtcaatgtagtttatgaaaaaacagctcttatgaagatacaattttcattagtgggaactt 43699463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 360 - 428
Target Start/End: Complemental strand, 52274168 - 52274100
Alignment:
Q  360 ataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttat 428  Q
    |||||||| ||||||||||| | |||||||||| ||| |||||||||| ||||   |||||||||||||    
T  52274168 ataagcttatcaaggtagtttacgaaaaaacagcttatgaagatacaattttcgtcagtgagaacttat 52274100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 385 - 460
Target Start/End: Complemental strand, 11256684 - 11256609
Alignment:
Q  385 aaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    |||||||| ||| |||||||||| |||   ||| |||||||||||||  | |||||||| ||||||||||||||||    
T  11256684 aaaaacagcttatgaagatacaattttagttagcgagaacttatgaattaacataaaagcttatttatttgcataa 11256609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 444
Target Start/End: Original strand, 32628813 - 32628900
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagt 444  Q
    |||||||||||||| ||||| || |||||||||||| ||  |||||||||| ||| |  |||||||||||| |||  | |||||||||    
T  32628813 ttcataagcttgtcgaggtaatttatgaaaaaacagcttgtgaagatacaattttgatcagtgagaacttacgaattaacataaaagt 32628900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 374 - 460
Target Start/End: Original strand, 9319100 - 9319186
Alignment:
Q  374 gtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    |||||| |||||||||||||||| |||| ||||| ||||| || ||| ||||||  ||  | |||||||| |||||||||| |||||    
T  9319100 gtagtttatgaaaaaacagtttatgaagctacaattttcattactgaaaacttaaaaattaacataaaagcttatttatttacataa 9319186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 459
Target Start/End: Complemental strand, 2330483 - 2330422
Alignment:
Q  398 gaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcata 459  Q
    |||||||||| ||||| | |||||||||||||||  |  |||||||||||||||| ||||||    
T  2330483 gaagatacaattttcatttgtgagaacttatgaaataaaataaaagtttatttatctgcata 2330422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 460
Target Start/End: Original strand, 11298675 - 11298720
Alignment:
Q  415 tagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    ||||||||||||| |||  || ||||||||||||||||||||||||    
T  11298675 tagtgagaacttaagaattattataaaagtttatttatttgcataa 11298720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 357 - 412
Target Start/End: Complemental strand, 1374414 - 1374358
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaa-cagtttaagaagatacaaatttc 412  Q
    ||||||||||||||| ||||||| ||||||||| ||| ||| |||||||||| ||||    
T  1374414 ttcataagcttgtcatggtagtttatgaaaaaaccagcttatgaagatacaattttc 1374358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 360 - 460
Target Start/End: Original strand, 8601239 - 8601339
Alignment:
Q  360 ataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcata 459  Q
    |||||| |||||| |||||| |||||||||| | ||| |||||||||| |||   |||||| || |||| ||  | ||| |||| |||||||||||||||    
T  8601239 ataagcctgtcaatgtagtttatgaaaaaactggttatgaagatacaatttttgttagtgaaaaattataaattaacattaaagcttatttatttgcata 8601338  T
Q  460 a 460  Q
    |    
T  8601339 a 8601339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 360 - 428
Target Start/End: Original strand, 19725331 - 19725399
Alignment:
Q  360 ataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttat 428  Q
    ||||| |||| |||||| || ||||||||||||| || ||||||| || ||||| |||||||| |||||    
T  19725331 ataagtttgttaaggtattttatgaaaaaacagtctatgaagatataattttcattagtgagagcttat 19725399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 357 - 413
Target Start/End: Complemental strand, 21216379 - 21216323
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttca 413  Q
    ||||||||||||||||||||||| ||||||||  || ||| |||| ||||| |||||    
T  21216379 ttcataagcttgtcaaggtagtttatgaaaaagtaggttatgaagctacaattttca 21216323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 360 - 428
Target Start/End: Complemental strand, 39932802 - 39932734
Alignment:
Q  360 ataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttat 428  Q
    ||||| |||| ||||||||  ||||||||||| |||| |||||||||| ||  | ||||||||||||||    
T  39932802 ataagattgttaaggtagtgtatgaaaaaacaatttatgaagatacaatttctattagtgagaacttat 39932734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 40699393 - 40699425
Alignment:
Q  359 cataagcttgtcaaggtagttaatgaaaaaaca 391  Q
    ||||||||||||||||||||| |||||||||||    
T  40699393 cataagcttgtcaaggtagtttatgaaaaaaca 40699425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 357 - 453
Target Start/End: Complemental strand, 55638132 - 55638036
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatt 453  Q
    |||||||| |||| ||  ||||| ||||||||||||||||  |||||||||  | |  |||||||||||||| ||  | ||||||| ||||||||||    
T  55638132 ttcataagtttgtaaatatagtttatgaaaaaacagtttataaagatacaatctccgttagtgagaacttataaattaacataaaaatttatttatt 55638036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 2e-20; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 30181585 - 30181688
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||||||||||||| || ||||||||| ||| ||||||||   ||||| ||||| |||||||||||  | |||||||| ||||||||||||    
T  30181585 ttcataagcttgtcaaggtagtttatcaaaaaacagcttatgaagatactgttttcattagtgggaacttatgaattaacataaaagcttatttatttgc 30181684  T
Q  457 ataa 460  Q
    ||||    
T  30181685 ataa 30181688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 357 - 458
Target Start/End: Complemental strand, 14691350 - 14691249
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    |||||||||||||||| ||| || ||||||||||| |||| ||||||| || ||||  |||||||||||||||||  | |||||||| ||||||||||||    
T  14691350 ttcataagcttgtcaatgtaatttatgaaaaaacaatttatgaagatataattttcgttagtgagaacttatgaattaacataaaaggttatttatttgc 14691251  T
Q  457 at 458  Q
    ||    
T  14691250 at 14691249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 366 - 460
Target Start/End: Original strand, 29378689 - 29378783
Alignment:
Q  366 ttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    |||||||||||||| |||||||||||| ||| |||||||||| ||||  |||| ||||||||||||  | | |||||| ||||||||||||||||    
T  29378689 ttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtaagaacttatgaattaacgtaaaagcttatttatttgcataa 29378783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 359 - 460
Target Start/End: Original strand, 46743991 - 46744091
Alignment:
Q  359 cataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcat 458  Q
    ||||||||||||| ||||||||||||||||||||  || |||||||||| ||||  ||||||||||||| |||  | |||||||| |||||||||| |||    
T  46743991 cataagcttgtca-ggtagttaatgaaaaaacagcatatgaagatacaattttcgttagtgagaacttacgaattaacataaaagcttatttattttcat 46744089  T
Q  459 aa 460  Q
    ||    
T  46744090 aa 46744091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 360 - 460
Target Start/End: Complemental strand, 47654462 - 47654362
Alignment:
Q  360 ataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcata 459  Q
    |||||||||| || |||||| |||||||||||||||| |||| ||||| ||||  |||||||||||||||||  |  ||||||  |||||||||||||||    
T  47654462 ataagcttgttaatgtagtttatgaaaaaacagtttatgaaggtacaattttcgttagtgagaacttatgaattaagataaaaacttatttatttgcata 47654363  T
Q  460 a 460  Q
    |    
T  47654362 a 47654362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 34922966 - 34923071
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaa--cagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttattt 454  Q
    |||||||| |||||||||||||| || ||||||  ||| ||  |||||||||  ||||  |||||||||||||||||| | |||||||| ||||||||||    
T  34922966 ttcataagtttgtcaaggtagtttataaaaaaaaacagcttgtgaagatacacttttcgttagtgagaacttatgaactaacataaaagcttatttattt 34923065  T
Q  455 gcataa 460  Q
    ||||||    
T  34923066 gcataa 34923071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 357 - 458
Target Start/End: Original strand, 38372593 - 38372694
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    |||||||| |||||||||||||| | |||||| ||| | ||||||| |||| ||||  |||||||||||||||||  | |||||||| | ||||||||||    
T  38372593 ttcataagtttgtcaaggtagtttacgaaaaagcagctcaagaagaaacaattttcgttagtgagaacttatgaattaacataaaagctgatttatttgc 38372692  T
Q  457 at 458  Q
    ||    
T  38372693 at 38372694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 357 - 428
Target Start/End: Original strand, 17944688 - 17944759
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttat 428  Q
    ||||||||||||||||||||||| ||  |||||||  ||| ||||||||||||| || ||||||||||||||    
T  17944688 ttcataagcttgtcaaggtagtttatagaaaaacaacttatgaagatacaaattacattagtgagaacttat 17944759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 44613524 - 44613421
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||| ||||||||| |||||||||||  ||| || ||||||| ||| | || | ||||||||||||  |  ||||||| ||||||||||||    
T  44613524 ttcataagcttgttaaggtagtttatgaaaaaacaacttatgacgatacaatttttattaattagaacttatgaattaatataaaagcttatttatttgc 44613425  T
Q  457 ataa 460  Q
    ||||    
T  44613424 ataa 44613421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 29390601 - 29390499
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||| ||||||||| |||||||| ||  ||| |||||||||| ||||  |||  |||| |||||||  | |||||||| ||||||||||||    
T  29390601 ttcataagcttgtaaaggtagtttatgaaaaa-caacttatgaagatacaattttcgttagctagaatttatgaattaacataaaagcttatttatttgc 29390503  T
Q  457 ataa 460  Q
    ||||    
T  29390502 ataa 29390499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 360 - 460
Target Start/End: Complemental strand, 43818927 - 43818826
Alignment:
Q  360 ataagcttgtcaaggtagttaatgaaaaaacagtttaagaagat-acaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcat 458  Q
    |||||||||| || ||  || |||||||||||||||| |||| | |||| ||||| |||||||||||||||||  |  ||||||  ||||||||||||||    
T  43818927 ataagcttgttaatgttatttatgaaaaaacagtttatgaaggttacaattttcattagtgagaacttatgaattaagataaaaacttatttatttgcat 43818828  T
Q  459 aa 460  Q
    ||    
T  43818827 aa 43818826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 360 - 460
Target Start/End: Original strand, 22032800 - 22032900
Alignment:
Q  360 ataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcata 459  Q
    |||||| ||| || |||||| ||||||||||| |||| |||| ||||| ||||  |||||||||||||| ||  |  ||||||  |||||||||||||||    
T  22032800 ataagcatgttaatgtagtttatgaaaaaacaatttatgaaggtacaattttcgttagtgagaacttataaattaagataaaaacttatttatttgcata 22032899  T
Q  460 a 460  Q
    |    
T  22032900 a 22032900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 356 - 425
Target Start/End: Complemental strand, 37779336 - 37779265
Alignment:
Q  356 tttcataagcttgtcaaggtagttaatg--aaaaaacagtttaagaagatacaaatttcaatagtgagaact 425  Q
    |||||||||||||||||||||||| |||  ||||||||| ||| ||| |||||| ||||  |||||||||||    
T  37779336 tttcataagcttgtcaaggtagtttatgaaaaaaaacagcttatgaaaatacaactttcgttagtgagaact 37779265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 39279464 - 39279568
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaat-agtgagaacttatgaacaatcataaaagtttatttatttg 455  Q
    ||||||||||||| ||||| ||| |||||||| ||| ||| |||||||||| ||||  | | ||||||| ||||||  | |||||||| |||||||||||    
T  39279464 ttcataagcttgttaaggtggtttatgaaaaatcagcttaggaagatacaattttcgttaattgagaacctatgaattaacataaaagcttatttatttg 39279563  T
Q  456 cataa 460  Q
     ||||    
T  39279564 tataa 39279568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 431
Target Start/End: Complemental strand, 6406916 - 6406849
Alignment:
Q  364 gcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaa 431  Q
    |||||||||||||||| |||||||||||| ||| |||||| ||| ||||  || ||||||| ||||||    
T  6406916 gcttgtcaaggtagtttatgaaaaaacagcttatgaagatgcaattttcgctaatgagaacctatgaa 6406849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 360 - 431
Target Start/End: Original strand, 16012736 - 16012807
Alignment:
Q  360 ataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaa 431  Q
    ||||||||||||| |||||| |||||||||| | ||  |||||||||| ||||  |||||| ||||||||||    
T  16012736 ataagcttgtcaaagtagtttatgaaaaaactgcttctgaagatacaattttcgttagtgaaaacttatgaa 16012807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 412
Target Start/End: Original strand, 20888609 - 20888664
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttc 412  Q
    ||||||||||||  ||||||||| ||||||||||| |||| |||||||||| ||||    
T  20888609 ttcataagcttgcaaaggtagtttatgaaaaaacaatttatgaagatacaattttc 20888664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 452
Target Start/End: Complemental strand, 23356542 - 23356447
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttat 452  Q
    |||| ||| ||||||||||| || |||||||||||||||| ||| |||| | |||   |||||||||| ||||||  | |||||||| ||||||||    
T  23356542 ttcacaagtttgtcaaggtaatttatgaaaaaacagtttatgaaaatactatttttgttagtgagaacctatgaattaacataaaagcttatttat 23356447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 14675997 - 14675955
Alignment:
Q  371 aaggtagttaatgaaaaaacagtttaagaagatacaaatttca 413  Q
    ||||||||| |||||||||||||||| |||||||||| |||||    
T  14675997 aaggtagtttatgaaaaaacagtttatgaagatacaattttca 14675955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 47511078 - 47511183
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaat--agtgagaacttatgaacaatcataaaagtttatttattt 454  Q
    ||||||||||||| |||| |||  |||||||||||| ||| |||||||||| ||||| |   |||||||||||||||  | |||||||  |||||||  |    
T  47511078 ttcataagcttgttaaggaagtctatgaaaaaacagcttatgaagatacaattttcattggggtgagaacttatgaattaacataaaaaattatttaact 47511177  T
Q  455 gcataa 460  Q
    ||||||    
T  47511178 gcataa 47511183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 460
Target Start/End: Original strand, 33204927 - 33204972
Alignment:
Q  415 tagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    |||||||||||||||||  | |||||||| ||||||||||||||||    
T  33204927 tagtgagaacttatgaattaacataaaagcttatttatttgcataa 33204972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 461
Target Start/End: Complemental strand, 49104392 - 49104315
Alignment:
Q  384 aaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataat 461  Q
    |||||| ||||||||||||||  | ||| |  |||||||| |||||||  | ||||||| ||||||||||||||||||    
T  49104392 aaaaaagagtttaagaagatatgatttttatgagtgagaatttatgaattaacataaaaatttatttatttgcataat 49104315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 3e-19; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 16972408 - 16972304
Alignment:
Q  357 ttcataagcttgtc-aaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaa-caatcataaaagtttatttattt 454  Q
    |||||||| ||||| ||||||||| |||||||||||| ||| |||||||||| ||||  |||||| |||||||||| |||| ||||||||||||||||||    
T  16972408 ttcataagtttgtctaaggtagttcatgaaaaaacagcttatgaagatacaattttcgttagtgataacttatgaatcaat-ataaaagtttatttattt 16972310  T
Q  455 gcataa 460  Q
    ||||||    
T  16972309 gcataa 16972304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 361 - 460
Target Start/End: Original strand, 32131479 - 32131578
Alignment:
Q  361 taagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    |||| |||||||||||||| ||||| |||||   || |||||||||| |||||||||||||||||||||||  | |||||||| |||| |||||||||||    
T  32131479 taagtttgtcaaggtagtttatgaataaacaacctatgaagatacaattttcaatagtgagaacttatgaattaacataaaagcttatctatttgcataa 32131578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 10298977 - 10298875
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||||||||||||| |||||||||||| ||| |||||||||| |||   || ||||||||||||||  | ||||||||  ||| |||||||    
T  10298977 ttcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttaatgagaacttatgaattaacataaaag-ctatctatttgc 10298879  T
Q  457 ataa 460  Q
    ||||    
T  10298878 ataa 10298875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 32975722 - 32975825
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||||||||||||| ||||||| |||  ||| |||||||||| |||   | |||||||||||||||  |  ||||||| ||||||||||||    
T  32975722 ttcataagcttgtcaaggtagtttatgaaaacacaacttatgaagatacaatttttgtttgtgagaacttatgaattaatataaaagcttatttatttgc 32975821  T
Q  457 ataa 460  Q
    ||||    
T  32975822 ataa 32975825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 34286614 - 34286512
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    |||||||||||||||||||||||  ||||||| ||| ||| |||||||||| ||||  ||| |||||||||||||  |  ||||||| ||||||||||||    
T  34286614 ttcataagcttgtcaaggtagtttgtgaaaaa-cagcttatgaagatacaattttcgttagggagaacttatgaattaatataaaagcttatttatttgc 34286516  T
Q  457 ataa 460  Q
    ||||    
T  34286515 ataa 34286512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 357 - 412
Target Start/End: Complemental strand, 35168492 - 35168437
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttc 412  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||    
T  35168492 ttcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattttc 35168437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 367 - 454
Target Start/End: Original strand, 8752851 - 8752938
Alignment:
Q  367 tgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttattt 454  Q
    |||||| ||| || |||||||||||| ||||||||||||||||||   | |||||||||||||||  | |||||||| ||||||||||    
T  8752851 tgtcaaagtaatttatgaaaaaacagcttaagaagatacaaattttgtttgtgagaacttatgaattaacataaaagcttatttattt 8752938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 24350570 - 24350467
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    |||||||||||||||| ||| || ||||||||| || ||| ||||||| || ||||  |||| ||||||||||||  | |||||||  ||||||||||||    
T  24350570 ttcataagcttgtcaacgtaatttatgaaaaaatagcttatgaagatataattttcgttagtaagaacttatgaattaacataaaatcttatttatttgc 24350471  T
Q  457 ataa 460  Q
    ||||    
T  24350470 ataa 24350467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 360 - 460
Target Start/End: Complemental strand, 9131176 - 9131076
Alignment:
Q  360 ataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcata 459  Q
    ||||||||||| |  |||||  |||| |||||| ||| |||||||||| ||||  ||||  |||||||||||  | ||||||||||||||||||||||||    
T  9131176 ataagcttgtcgatttagtttctgaagaaacagcttatgaagatacaattttcgttagtcggaacttatgaattaacataaaagtttatttatttgcata 9131077  T
Q  460 a 460  Q
    |    
T  9131076 a 9131076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 395 - 460
Target Start/End: Complemental strand, 32213028 - 32212963
Alignment:
Q  395 taagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    |||||||| |||| ||||| |||||||||||||| ||  | |||||||| ||||||||||||||||    
T  32213028 taagaagacacaattttcattagtgagaacttataaaataacataaaagcttatttatttgcataa 32212963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 35285963 - 35286066
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    |||||||||| ||||| |||||| |||||||||  | ||| |||||||||| ||| | ||| |||||||||||||  | | | |||| |||||||||||     
T  35285963 ttcataagctcgtcaaagtagtttatgaaaaaaatgcttatgaagatacaatttttagtagcgagaacttatgaattaacgtgaaagcttatttatttgt 35286062  T
Q  457 ataa 460  Q
    ||||    
T  35286063 ataa 35286066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 41145446 - 41145344
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    |||||||| |||| ||||||||| |||||||||||  || | ||||||| | ||||| |||||||||||||||||  |  ||| ||  ||||||||||||    
T  41145446 ttcataagtttgttaaggtagtttatgaaaaaacaacttta-aagatacgattttcattagtgagaacttatgaattaatatataaacttatttatttgc 41145348  T
Q  457 ataa 460  Q
    ||||    
T  41145347 ataa 41145344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 398 - 460
Target Start/End: Complemental strand, 9131027 - 9130965
Alignment:
Q  398 gaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    |||||||||| ||||  ||||  |||||||||||  | |||||||||||||||||||||||||    
T  9131027 gaagatacaattttcgttagtcggaacttatgaattaacataaaagtttatttatttgcataa 9130965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 366 - 460
Target Start/End: Complemental strand, 36907686 - 36907592
Alignment:
Q  366 ttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    |||| ||||||||| |||||||||||  ||  ||| |||||| ||||  |||| ||| ||||||||  | |||||||| ||||||||||||||||    
T  36907686 ttgttaaggtagtttatgaaaaaacaacttgtgaatatacaattttcgttagtaagatcttatgaattagcataaaagcttatttatttgcataa 36907592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 357 - 407
Target Start/End: Original strand, 38895694 - 38895744
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaa 407  Q
    ||||||||||||| ||||||||| ||||||||| | |||| ||||||||||    
T  38895694 ttcataagcttgttaaggtagtttatgaaaaaataatttatgaagatacaa 38895744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 460
Target Start/End: Complemental strand, 25465891 - 25465795
Alignment:
Q  363 agcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    |||||||||||| |||| |||||||| ||  ||| |||||||||| |||   || ||| ||||||||||  | |||||||| ||||||||||||||||    
T  25465891 agcttgtcaaggaagtttatgaaaaa-caacttatgaagatacaatttttgttactgaaaacttatgaattaacataaaagcttatttatttgcataa 25465795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 428
Target Start/End: Complemental strand, 37410950 - 37410893
Alignment:
Q  371 aaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttat 428  Q
    ||||||||| |||||||||||||| | |||||||||| ||||  |||| |||||||||    
T  37410950 aaggtagtttatgaaaaaacagttcatgaagatacaattttcgttagtaagaacttat 37410893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 460
Target Start/End: Complemental strand, 42363354 - 42363265
Alignment:
Q  371 aaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    ||||||||| |||||||||| ||||| |||||||||| |||   |||||||||||| | ||  |  ||||||| |||||||||| |||||    
T  42363354 aaggtagtttatgaaaaaaccgtttatgaagatacaatttttgttagtgagaacttttaaattaaaataaaagcttatttatttacataa 42363265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 360 - 460
Target Start/End: Original strand, 2669686 - 2669786
Alignment:
Q  360 ataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcata 459  Q
    ||||| |||| ||||||||| |||||||||||  ||| ||| |||||  ||||| ||||  || ||||||||  | |||||||| |||||||||| ||||    
T  2669686 ataagtttgttaaggtagtttatgaaaaaacaacttatgaatatacatttttcattagtaggatcttatgaattaacataaaagcttatttattttcata 2669785  T
Q  460 a 460  Q
    |    
T  2669786 a 2669786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 384 - 460
Target Start/End: Original strand, 10213757 - 10213833
Alignment:
Q  384 aaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    ||||||||| ||| ||||| |||| |||   |||||||||||||||||  | |||| ||| ||||||||||||||||    
T  10213757 aaaaaacagcttatgaagaaacaatttttgttagtgagaacttatgaattaacatacaagcttatttatttgcataa 10213833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 431
Target Start/End: Complemental strand, 25333776 - 25333709
Alignment:
Q  363 agcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaa 431  Q
    ||||||||||||||||| ||| |||||||  ||| |||||||||| ||||  |||||| ||||||||||    
T  25333776 agcttgtcaaggtagtttatg-aaaaacaacttatgaagatacaattttcgttagtgaaaacttatgaa 25333709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 2255769 - 2255872
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||| |||||| || |||||||||||| ||| |||||||||| |||   |||||||||| ||||||  | |||||||| |||||||||| |    
T  2255769 ttcataagcttgttaaggtaatttatgaaaaaacagcttatgaagatacaatttttggtagtgagaacatatgaattaacataaaagcttatttatttac 2255868  T
Q  457 ataa 460  Q
    ||||    
T  2255869 ataa 2255872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 357 - 431
Target Start/End: Original strand, 13429490 - 13429565
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttca-atagtgagaacttatgaa 431  Q
    |||||||||||||||| |||||| |||||||||||||||| || ||||||| |||||  |||||||||||||||||    
T  13429490 ttcataagcttgtcaaagtagtttatgaaaaaacagtttatgaggatacaattttcatttagtgagaacttatgaa 13429565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 360 - 460
Target Start/End: Original strand, 10874022 - 10874122
Alignment:
Q  360 ataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcata 459  Q
    |||||||||| ||||||||| |||| ||||||| ||| |||||||||| |||   | |||| ||||||||||  | |||||||| |||||||||||||||    
T  10874022 ataagcttgttaaggtagtttatgagaaaacagcttatgaagatacaattttagttggtgaaaacttatgaattaacataaaagcttatttatttgcata 10874121  T
Q  460 a 460  Q
    |    
T  10874122 a 10874122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 2027227 - 2027124
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    |||| ||| ||||||||  |||| |||||||||||| ||| |||||||||| |||   |||| ||||||||||||  | ||||||||||||| |||||||    
T  2027227 ttcagaagtttgtcaagacagtttatgaaaaaacagcttatgaagatacaacttttgttagtaagaacttatgaattaacataaaagtttatctatttgc 2027128  T
Q  457 ataa 460  Q
    ||||    
T  2027127 ataa 2027124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 10687345 - 10687448
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||| | | ||||||||| ||| |||||||  ||| | |||||||| ||||  ||| ||||||||||||||   |||||||| ||||||||||||    
T  10687345 ttcataagcctattaaggtagtttatgtaaaaacaacttatggagatacaattttcgttagcgagaacttatgaactgacataaaagcttatttatttgc 10687444  T
Q  457 ataa 460  Q
    ||||    
T  10687445 ataa 10687448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 32675940 - 32675837
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    |||||||||||   ||||| ||| ||||||||| |  ||| |||||||||| ||||| |||||||||||||||||  |  ||||||  ||||||||||||    
T  32675940 ttcataagcttcgtaaggttgtttatgaaaaaataacttatgaagatacaattttcattagtgagaacttatgaattaatataaaaacttatttatttgc 32675841  T
Q  457 ataa 460  Q
    ||||    
T  32675840 ataa 32675837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 359 - 460
Target Start/End: Original strand, 6758664 - 6758766
Alignment:
Q  359 cataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaa-caatcataaaagtttatttatttgca 457  Q
    ||||||||||| ||||||||| ||||||||  |  |||  ||||||||||||||  |||||||||||||||||  |||   ||||| |||||||||||||    
T  6758664 cataagcttgttaaggtagtttatgaaaaattaacttatcaagatacaaatttcgttagtgagaacttatgaattaatataaaaagcttatttatttgca 6758763  T
Q  458 taa 460  Q
    |||    
T  6758764 taa 6758766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 359 - 425
Target Start/End: Original strand, 6776845 - 6776911
Alignment:
Q  359 cataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaact 425  Q
    ||||||||||| ||||||||| ||| ||||| |  ||| |||||||||||||||| |||||||||||    
T  6776845 cataagcttgttaaggtagtttatggaaaaataacttatgaagatacaaatttcattagtgagaact 6776911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 357 - 459
Target Start/End: Original strand, 8014823 - 8014925
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||||||||||||| |||||||||| |  || |||||||||| |||   |||||| |||| || ||  | |||||||| ||||| ||||||    
T  8014823 ttcataagcttgtcaaggtagtttatgaaaaaactgcatatgaagatacaattttggttagtgaaaactgataaattaacataaaagcttattaatttgc 8014922  T
Q  457 ata 459  Q
    |||    
T  8014923 ata 8014925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 10755331 - 10755231
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||||||||||  | ||||||||| || ||| |||   |||| ||||  |||| ||||||||||||  | |||||||| ||||||||||||    
T  10755331 ttcataagcttgtcaaggtaacttatgaaaaaatagcttatgaa---acaattttcgttagtaagaacttatgaattaacataaaagcttatttatttgc 10755235  T
Q  457 ataa 460  Q
    ||||    
T  10755234 ataa 10755231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 360 - 460
Target Start/End: Complemental strand, 2034277 - 2034177
Alignment:
Q  360 ataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcata 459  Q
    ||||| |||||||||||||| |||||||||||  |||  ||||||||| ||||   ||| | |||||||||   | |||||||| |||||||||||||||    
T  2034277 ataagtttgtcaaggtagtttatgaaaaaacaacttaccaagatacaattttcgtaagtaataacttatgattcaacataaaagcttatttatttgcata 2034178  T
Q  460 a 460  Q
    |    
T  2034177 a 2034177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 453
Target Start/End: Complemental strand, 9202438 - 9202354
Alignment:
Q  369 tcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatt 453  Q
    |||||| |||| ||||||||||||  || |||||||||| ||| | |||||| ||||||||||  | |||||||| |||||||||    
T  9202438 tcaaggcagtttatgaaaaaacagcatatgaagatacaatttttattagtgataacttatgaattaacataaaagcttatttatt 9202354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 25430817 - 25430714
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatg-aaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttg 455  Q
    ||||||||||||||||||||||| ||| ||||||||| ||| |||||||| |||||    |||||||| |||||||  |   ||||||||||||| ||||    
T  25430817 ttcataagcttgtcaaggtagtttatgaaaaaaacagcttatgaagatac-aattttgtcagtgagaaattatgaattaaggtaaaagtttatttctttg 25430719  T
Q  456 cataa 460  Q
    |||||    
T  25430718 cataa 25430714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 6958659 - 6958762
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||| |||||||||||  ||||||| ||| ||  |||||||||| ||||  ||||||||| |||| ||  |  ||||||| |||||||| |||    
T  6958659 ttcataagcttctcaaggtagtttgtgaaaaagcagcttgtgaagatacaattttctttagtgagaagttataaattagtataaaagcttatttatgtgc 6958758  T
Q  457 ataa 460  Q
    ||||    
T  6958759 ataa 6958762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 23239282 - 23239385
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||| || || ||| || ||||| ||  ||| || ||||||| ||||  |||||||||||||||||  |  ||||||| ||||||||||||    
T  23239282 ttcataagcttgttaacgtggtttatcaaaaagcaaattatgacgatacaactttccttagtgagaacttatgaattaatataaaagcttatttatttgc 23239381  T
Q  457 ataa 460  Q
    ||||    
T  23239382 ataa 23239385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 362 - 460
Target Start/End: Complemental strand, 35071475 - 35071376
Alignment:
Q  362 aagcttgtcaaggtagttaatgaaaaaac-agtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    |||||||||||||||||| |||||||||  || ||| |||||| |||  ||   | |||||||||||||||  | |||||||| ||||||||||||||||    
T  35071475 aagcttgtcaaggtagtttatgaaaaaaatagcttatgaagatgcaatgtttttttgtgagaacttatgaattaacataaaagcttatttatttgcataa 35071376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 374 - 428
Target Start/End: Complemental strand, 32165295 - 32165241
Alignment:
Q  374 gtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttat 428  Q
    |||||| |||||||||||||||| |||||||||| ||||  |||||||| |||||    
T  32165295 gtagtttatgaaaaaacagtttatgaagatacaattttcgttagtgagagcttat 32165241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 460
Target Start/End: Complemental strand, 9201714 - 9201669
Alignment:
Q  415 tagtgagaacttatgaacaatcataaaagtttatttatttgcataa 460  Q
    |||||||||||||||||  | |||||||| ||||||||||||||||    
T  9201714 tagtgagaacttatgaattaacataaaagcttatttatttgcataa 9201669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 24780 - 24885
Alignment:
Q  357 ttcataagcttgtcaa--ggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttattt 454  Q
    ||||||||||||||||  ||||||| |||||||||||| | |  |||||||||  |||| |||||||||||||| ||  | |||||||  ||||||||||    
T  24780 ttcataagcttgtcaaaaggtagtttatgaaaaaacagctaatcaagatacaatattcattagtgagaacttataaattaacataaaaacttatttattt 24879  T
Q  455 gcataa 460  Q
    ||||||    
T  24880 gcataa 24885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 24440 - 24337
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    ||||||||||||||||||||||| || ||| ||||  ||| ||||||| || ||||  |||| | ||||| ||||  ||||||||||  |||||||||||    
T  24440 ttcataagcttgtcaaggtagttgataaaataacaacttacgaagatataattttcgttagtaaaaacttgtgaattatcataaaagcctatttatttgc 24341  T
Q  457 ataa 460  Q
    ||||    
T  24340 ataa 24337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 357 - 431
Target Start/End: Complemental strand, 97257 - 97186
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaa 431  Q
    |||||||||| |||||||||||| |||||||||||| ||   | ||||||| ||||  |||||||||||||||||    
T  97257 ttcataagctagtcaaggtagtttatgaaaaaacagctt---atgatacaattttcgttagtgagaacttatgaa 97186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 14797 - 14694
Alignment:
Q  357 ttcataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttatgaacaatcataaaagtttatttatttgc 456  Q
    |||||||| || | || |||||| |||||||| |||||||  || |||||| ||||  |||||||||||||| ||  | ||| |||| ||||||||||||    
T  14797 ttcataagtttttaaatgtagtttatgaaaaatcagtttataaatatacaattttcgttagtgagaacttataaattaacatgaaagcttatttatttgc 14698  T
Q  457 ataa 460  Q
    ||||    
T  14697 ataa 14694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 428
Target Start/End: Original strand, 1095 - 1164
Alignment:
Q  359 cataagcttgtcaaggtagttaatgaaaaaacagtttaagaagatacaaatttcaatagtgagaacttat 428  Q
    |||||| |||| |||||| || ||| ||||| |  ||| |||||||||||||||| ||||||||||||||    
T  1095 cataagattgttaaggtaatttatggaaaaataacttatgaagatacaaatttcattagtgagaacttat 1164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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