View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17564_low_9 (Length: 282)
Name: NF17564_low_9
Description: NF17564
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17564_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 10 - 265
Target Start/End: Complemental strand, 39033653 - 39033398
Alignment:
| Q |
10 |
ataatactaacttagtttataaagattttctaaaaaataatcaaattaattaagatagataagttgagtttaatcaaaacctaaagttactgtaatattt |
109 |
Q |
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| T |
39033653 |
ataatattaacttagtttataaagattttctaaaaaataatcaaattaattaagatagataagttgagtttaatcaaaacctaaagttactgtaatattt |
39033554 |
T |
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| Q |
110 |
tgtatgataatctagtttcctttaaaatacgatgctcactttataatttcttaatgacaatcaatcatattcgtgatctctatacgtgattgacgatgct |
209 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39033553 |
tgtatgataatttagtttcctttaaaatacgatgctcactttataatttcttaatgacaatcaatcatattcgtgatctctatacgtgattgacgatgct |
39033454 |
T |
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| Q |
210 |
aatgcttgcagaaatcaatttcctaagttttcaagctataagaagaatctttggat |
265 |
Q |
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| T |
39033453 |
aatgcttgcagaaatcaatttcctaagttttcaagctataagaagaatctttggat |
39033398 |
T |
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