View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17565_high_17 (Length: 291)
Name: NF17565_high_17
Description: NF17565
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17565_high_17 |
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Alignment Details
Target: chr3 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 21 - 275
Target Start/End: Complemental strand, 35648853 - 35648599
Alignment:
| Q |
21 |
agaagaccaatttaaagttaaatgataacaagggtttgcactgctcacaaccctatgttttaagtcttagaaatgcatgaaagagaataattagtaacat |
120 |
Q |
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| T |
35648853 |
agaagaccaatttaaagttaaatgataacaagggtttgcactgctcacaaccctatgttttaagtcttagaaatgcatgaaagagaataattggcaacat |
35648754 |
T |
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| Q |
121 |
gtgacagtgactcctataactaaacaaacagagttaatcaaaccaatacagttgttaaagttcaatttctactagtagatatcaaacgttacaaggtata |
220 |
Q |
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| T |
35648753 |
gtgacactggctcccataactacaccaacagagttaatcaaaccaatacagttattaaagttcaatttccactagtagatatccaacgttataaggtatg |
35648654 |
T |
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| Q |
221 |
acagttgataatgcatttaacatatgacaatggtttccttaaaatatgacagtgg |
275 |
Q |
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| T |
35648653 |
acagtggataatgcatttaacatatgacaatggattccttaaaatatgacagtgg |
35648599 |
T |
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