View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17565_high_6 (Length: 420)

Name: NF17565_high_6
Description: NF17565
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17565_high_6
NF17565_high_6
[»] chr4 (19 HSPs)
chr4 (1-420)||(18750841-18751272)
chr4 (1-81)||(15166485-15166565)
chr4 (1-81)||(22171765-22171845)
chr4 (1-70)||(10106312-10106381)
chr4 (1-61)||(9536775-9536835)
chr4 (1-81)||(17335355-17335435)
chr4 (1-68)||(7583809-7583876)
chr4 (10-76)||(8968076-8968142)
chr4 (1-81)||(12616731-12616811)
chr4 (33-82)||(8928312-8928361)
chr4 (1-66)||(17711323-17711388)
chr4 (1-81)||(11252129-11252209)
chr4 (1-53)||(16928941-16928993)
chr4 (21-81)||(17434471-17434531)
chr4 (33-76)||(12289165-12289208)
chr4 (1-83)||(14573466-14573547)
chr4 (13-71)||(22350250-22350308)
chr4 (1-57)||(10432195-10432251)
chr4 (1-37)||(19603901-19603937)
[»] chr7 (28 HSPs)
chr7 (4-74)||(5236873-5236943)
chr7 (1-83)||(23173683-23173765)
chr7 (1-74)||(8977477-8977550)
chr7 (1-81)||(9078881-9078962)
chr7 (1-81)||(3585522-3585602)
chr7 (1-83)||(26249073-26249155)
chr7 (1-81)||(13280776-13280856)
chr7 (1-81)||(18986744-18986824)
chr7 (1-81)||(19001372-19001452)
chr7 (1-71)||(4450688-4450758)
chr7 (1-71)||(8052439-8052508)
chr7 (1-71)||(11804715-11804785)
chr7 (1-81)||(2565923-2566003)
chr7 (9-81)||(19201483-19201555)
chr7 (1-81)||(39270273-39270352)
chr7 (28-81)||(10332448-10332501)
chr7 (29-82)||(10414278-10414331)
chr7 (1-82)||(23897257-23897338)
chr7 (27-75)||(6039303-6039351)
chr7 (1-81)||(10611730-10611810)
chr7 (11-71)||(19201332-19201392)
chr7 (5-72)||(16055265-16055332)
chr7 (180-229)||(1848753-1848802)
chr7 (12-81)||(19154846-19154915)
chr7 (12-81)||(20754245-20754314)
chr7 (12-72)||(3692769-3692829)
chr7 (1-81)||(9767802-9767882)
chr7 (13-72)||(23127903-23127962)
[»] chr6 (26 HSPs)
chr6 (1-71)||(17384040-17384110)
chr6 (1-69)||(14641649-14641717)
chr6 (1-71)||(9519749-9519819)
chr6 (1-76)||(17822028-17822104)
chr6 (1-71)||(4340681-4340751)
chr6 (1-83)||(14076413-14076495)
chr6 (1-82)||(22404253-22404334)
chr6 (1-83)||(14078054-14078137)
chr6 (1-71)||(14723701-14723771)
chr6 (1-55)||(19577563-19577617)
chr6 (7-71)||(1636656-1636720)
chr6 (1-61)||(21152511-21152571)
chr6 (1-72)||(24469815-24469886)
chr6 (1-72)||(24480041-24480112)
chr6 (5-82)||(21760406-21760483)
chr6 (1-70)||(22845862-22845931)
chr6 (5-68)||(11136939-11137002)
chr6 (1-47)||(19594010-19594056)
chr6 (12-82)||(21687128-21687198)
chr6 (1-71)||(9841036-9841106)
chr6 (3-72)||(20004188-20004258)
chr6 (31-72)||(2588343-2588384)
chr6 (1-81)||(9848180-9848260)
chr6 (1-61)||(17847797-17847857)
chr6 (11-71)||(21036957-21037017)
chr6 (20-72)||(26820896-26820948)
[»] chr3 (27 HSPs)
chr3 (1-82)||(19912597-19912678)
chr3 (1-81)||(34276437-34276517)
chr3 (1-81)||(12517307-12517387)
chr3 (1-70)||(8115305-8115374)
chr3 (1-81)||(18457111-18457191)
chr3 (1-72)||(8145265-8145336)
chr3 (1-72)||(25850957-25851028)
chr3 (29-81)||(26092950-26093002)
chr3 (1-76)||(22247014-22247088)
chr3 (3-82)||(22470401-22470480)
chr3 (1-70)||(14977823-14977892)
chr3 (1-72)||(12771211-12771282)
chr3 (1-82)||(16242193-16242273)
chr3 (3-75)||(2508725-2508797)
chr3 (1-69)||(12372344-12372412)
chr3 (12-72)||(20891654-20891714)
chr3 (12-72)||(52935542-52935602)
chr3 (1-76)||(19170146-19170221)
chr3 (1-72)||(27073969-27074040)
chr3 (3-61)||(19387879-19387937)
chr3 (1-82)||(16228343-16228424)
chr3 (43-76)||(51118485-51118518)
chr3 (5-81)||(1096761-1096836)
chr3 (1-37)||(2166078-2166114)
chr3 (1-81)||(19909029-19909109)
chr3 (1-81)||(20021817-20021897)
chr3 (21-81)||(27852603-27852663)
[»] chr8 (24 HSPs)
chr8 (1-72)||(18446868-18446939)
chr8 (1-86)||(13313266-13313351)
chr8 (1-72)||(15176441-15176512)
chr8 (1-72)||(17510921-17510992)
chr8 (1-71)||(26888503-26888573)
chr8 (1-81)||(20400351-20400431)
chr8 (1-81)||(19705003-19705083)
chr8 (1-67)||(24090892-24090958)
chr8 (8-81)||(29765391-29765465)
chr8 (8-61)||(24520022-24520075)
chr8 (1-81)||(19265839-19265919)
chr8 (1-81)||(24389773-24389853)
chr8 (1-61)||(24583191-24583251)
chr8 (25-81)||(25227300-25227356)
chr8 (1-83)||(28621621-28621703)
chr8 (12-69)||(30117670-30117727)
chr8 (1-61)||(17100226-17100286)
chr8 (1-81)||(24380353-24380433)
chr8 (33-76)||(11222342-11222385)
chr8 (21-72)||(17835580-17835631)
chr8 (26-81)||(21695413-21695468)
chr8 (26-76)||(15557409-15557459)
chr8 (1-81)||(23867829-23867909)
chr8 (20-72)||(24105525-24105577)
[»] chr1 (32 HSPs)
chr1 (1-72)||(12210282-12210353)
chr1 (1-66)||(16180734-16180799)
chr1 (1-82)||(22624633-22624714)
chr1 (1-81)||(15542308-15542388)
chr1 (1-72)||(729153-729224)
chr1 (1-66)||(15158803-15158868)
chr1 (1-81)||(21450784-21450864)
chr1 (1-69)||(27973320-27973388)
chr1 (4-76)||(28009766-28009838)
chr1 (1-83)||(26611329-26611411)
chr1 (1-82)||(21663089-21663170)
chr1 (1-81)||(18527496-18527576)
chr1 (1-81)||(26647357-26647437)
chr1 (31-81)||(10062960-10063010)
chr1 (12-82)||(24901237-24901307)
chr1 (5-82)||(14782551-14782628)
chr1 (1-81)||(22507381-22507462)
chr1 (1-81)||(25402435-25402515)
chr1 (26-82)||(26652616-26652672)
chr1 (21-71)||(11845231-11845281)
chr1 (1-82)||(22426514-22426595)
chr1 (33-81)||(17016814-17016862)
chr1 (1-69)||(18734597-18734665)
chr1 (1-81)||(18832232-18832312)
chr1 (31-71)||(26581620-26581660)
chr1 (1-72)||(20107871-20107942)
chr1 (33-72)||(21536915-21536954)
chr1 (1-71)||(16363640-16363710)
chr1 (3-81)||(16817108-16817186)
chr1 (31-83)||(7221563-7221615)
chr1 (41-81)||(20033118-20033158)
chr1 (43-83)||(24689296-24689336)
[»] chr5 (22 HSPs)
chr5 (1-83)||(19003763-19003845)
chr5 (1-75)||(34132103-34132177)
chr5 (1-81)||(23214825-23214905)
chr5 (1-54)||(23387574-23387627)
chr5 (1-81)||(19053118-19053198)
chr5 (1-81)||(20860356-20860436)
chr5 (11-82)||(29987984-29988055)
chr5 (20-76)||(15691304-15691360)
chr5 (33-81)||(32415830-32415878)
chr5 (1-72)||(18832239-18832310)
chr5 (5-72)||(25400747-25400814)
chr5 (1-71)||(25920848-25920918)
chr5 (1-71)||(28666509-28666579)
chr5 (33-82)||(20102892-20102941)
chr5 (21-81)||(23266853-23266913)
chr5 (1-81)||(24142424-24142504)
chr5 (1-72)||(24658308-24658380)
chr5 (26-85)||(19761577-19761636)
chr5 (33-72)||(20593222-20593261)
chr5 (43-82)||(28280342-28280381)
chr5 (33-73)||(20680628-20680668)
chr5 (1-37)||(24320566-24320602)
[»] scaffold0032 (1 HSPs)
scaffold0032 (5-86)||(92823-92904)
[»] chr2 (21 HSPs)
chr2 (1-81)||(17350995-17351075)
chr2 (1-69)||(18758318-18758386)
chr2 (1-81)||(17891748-17891828)
chr2 (1-72)||(24086315-24086386)
chr2 (1-72)||(27907531-27907602)
chr2 (33-83)||(23861134-23861184)
chr2 (1-71)||(28918205-28918275)
chr2 (1-82)||(21905743-21905824)
chr2 (26-82)||(16157083-16157139)
chr2 (1-81)||(26313195-26313275)
chr2 (1-76)||(18120550-18120625)
chr2 (26-76)||(29892232-29892282)
chr2 (1-70)||(35680111-35680180)
chr2 (1-81)||(25196628-25196708)
chr2 (26-82)||(26651636-26651692)
chr2 (1-72)||(25532253-25532324)
chr2 (5-72)||(27540274-27540341)
chr2 (1-82)||(20853098-20853179)
chr2 (180-229)||(28925059-28925108)
chr2 (1-81)||(34574530-34574611)
chr2 (1-81)||(25537573-25537653)
[»] scaffold0555 (1 HSPs)
scaffold0555 (1-82)||(6470-6551)
[»] scaffold0451 (2 HSPs)
scaffold0451 (1-72)||(5747-5818)
scaffold0451 (1-82)||(10092-10173)
[»] scaffold0014 (1 HSPs)
scaffold0014 (3-85)||(192141-192223)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-54)||(4841-4894)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-81)||(182511-182591)
[»] scaffold0111 (1 HSPs)
scaffold0111 (2-47)||(21458-21503)
[»] scaffold0258 (1 HSPs)
scaffold0258 (1-81)||(20252-20332)
[»] scaffold0043 (1 HSPs)
scaffold0043 (21-81)||(88436-88496)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-61)||(41356-41416)
[»] scaffold0085 (1 HSPs)
scaffold0085 (37-76)||(24043-24082)
[»] scaffold0034 (1 HSPs)
scaffold0034 (180-226)||(75941-75987)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-83)||(243829-243910)
[»] scaffold0002 (1 HSPs)
scaffold0002 (33-70)||(369261-369298)
[»] scaffold0637 (1 HSPs)
scaffold0637 (21-81)||(7423-7483)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-81)||(23053-23133)


Alignment Details
Target: chr4 (Bit Score: 342; Significance: 0; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 1 - 420
Target Start/End: Original strand, 18750841 - 18751272
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaactactcaaacaagtcata 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18750841 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtcatcaactactcaaacaagtcata 18750940  T
Q  101 atgagagaagaaaatcctcacatcactctaagagactctaggagactataaaatgttgaaaaccttgggtgaagtctttcttgggttccaaccagcaaac 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18750941 atgagagaagaaaatcctcacatcactctaagagactctaggagactataaaatgttgaaaaccttgggtgaagtctttcttggattccaaccagcaaac 18751040  T
Q  201 ccattggtgtttgatatcaagaatagtgtgttgaa------------taaccaattttcaagtaaggagtcaaaagactacaagctaatctgacaaactt 288  Q
    |||||||||||||||||||||||||||||||||||            ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18751041 ccattggtgtttgatatcaagaatagtgtgttgaatactttaaaggctaaccaatttttaagtaaggagtcaaaagactacaagctaatctgacaaactt 18751140  T
Q  289 ccaggtagcatgcgacacaaccaacccaacaaggttgtctgaatcnnnnnnncgacttcgtttgttcggttattctataggtggacgggataaggattgt 388  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||       ||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  18751141 ccaggaagcatgcggcacaaccaacccaacaaggttgtctgaatcagaaaaacgacttcgtttgttcgggtattctataggtggaagggataaggattgt 18751240  T
Q  389 gtaacaaccagagattttcaaactgaaagttt 420  Q
    ||||||||||||||||||||||||||||||||    
T  18751241 gtaacaaccagagattttcaaactgaaagttt 18751272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 15166485 - 15166565
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    ||||||||| |||||||||||||| |||||||||||| ||||||||| ||||||| |||||||||||||||| ||| ||||    
T  15166485 atactcctcgtttttgctgctaaaacctactgaaaatgactgaaaaacatgctaagaataatgtaagatgacctgtcatca 15166565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 22171765 - 22171845
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||||||||||||||||||||| |||| |||||||| | |||||| ||||||| |||||||||||||||| ||| ||||    
T  22171765 atactcctcctttttgctgctaaaacctaatgaaaatagcagaaaaacatgctaagaataatgtaagatgacctgtcatca 22171845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 10106312 - 10106381
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatg 70  Q
    ||||||||||||||||| |||||| |||||||||||| || |||||| ||||||| ||||||||||||||    
T  10106312 atactcctcctttttgcagctaaaacctactgaaaatgacagaaaaacatgctaagaataatgtaagatg 10106381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 9536835 - 9536775
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataa 61  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||| ||||||| |||||    
T  9536835 atactcctcctttttgctgctaaaacctactgaaaataattgaaaaacatgctaagaataa 9536775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 17335435 - 17335355
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||||||||||||||| ||||| | |||||||||| ||||||||| |||| || ||||| |||||||||||||| ||||    
T  17335435 atactcctcctttttgcttctaaaacttactgaaaatgactgaaaaacatgccaagaataacgtaagatgacatgtcatca 17335355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 7583809 - 7583876
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaaga 68  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||| ||||||| ||||| ||||||    
T  7583809 atactcctcctttttgctgctaaaacctactgaaaatgattgaaaaagatgctaagaataacgtaaga 7583876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 8968142 - 8968076
Alignment:
Q  10 ctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgt 76  Q
    ||||||||||||||| |||||| ||||| ||||||||| ||||||| ||||| ||||||||||||||    
T  8968142 ctttttgctgctaaaacctacttaaaatgactgaaaaacatgctaagaataacgtaagatgacatgt 8968076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 12616731 - 12616811
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||| ||||||||||||||||| |||||||||||  ||||||||| ||| ||| ||| | |||||||||||||| ||||    
T  12616731 atactcatcctttttgctgctaaaacctactgaaaaagactgaaaaacatgttaagaattacgtaagatgacatgtcatca 12616811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 8928361 - 8928312
Alignment:
Q  33 aaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaa 82  Q
    ||||| ||||||||||||||||||||||| |||||||||||||| |||||    
T  8928361 aaaatgactgaaaaatatgctaaaaataacgtaagatgacatgtcatcaa 8928312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 17711323 - 17711388
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaa 66  Q
    ||||||||| ||||||| |||||| |||||||||||| ||| ||||| ||||||| ||||||||||    
T  17711323 atactcctcatttttgcagctaaaacctactgaaaatgactaaaaaacatgctaagaataatgtaa 17711388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 11252209 - 11252129
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    ||||||||  |||||  ||||||| |||||| |||  |||||||||| ||||||||||||| |||||||||| ||| ||||    
T  11252209 atactcctttttttttttgctaaatcctactaaaataaactgaaaaacatgctaaaaataacgtaagatgacctgtcatca 11252129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 16928941 - 16928993
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgct 53  Q
    ||||||||| ||||||| |||||| |||||||||||| ||||||||| |||||    
T  16928941 atactcctcatttttgccgctaaaacctactgaaaatgactgaaaaacatgct 16928993  T

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Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 17434471 - 17434531
Alignment:
Q  21 taaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||| |||||||||||| ||| ||||| ||||||||||||| |||||||||| ||| ||||    
T  17434471 taaaacctactgaaaatgacttaaaaacatgctaaaaataacgtaagatgacctgtcatca 17434531  T

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Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 12289208 - 12289165
Alignment:
Q  33 aaaataactgaaaaatatgctaaaaataatgtaagatgacatgt 76  Q
    ||||| ||||||||||||| |||||||||||||| |||||||||    
T  12289208 aaaatgactgaaaaatatgttaaaaataatgtaatatgacatgt 12289165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 14573466 - 14573547
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaac 83  Q
    |||||||||  |||||||  |||| |||||| ||||| ||| ||||||||||||| ||||| ||||||||| |||| ||||||    
T  14573466 atactcctctgttttgctagtaaaacctacttaaaatgact-aaaaatatgctaagaataacgtaagatgatatgtcatcaac 14573547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 22350308 - 22350250
Alignment:
Q  13 tttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatga 71  Q
    ||||||| |||| |||||| |||  |||||||||| ||||||| |||||||||||||||    
T  22350308 tttgctggtaaaacctactaaaataaactgaaaaacatgctaagaataatgtaagatga 22350250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 10432195 - 10432251
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaa 57  Q
    ||||||||| ||||||||||| || |||| | ||||||||||||||| |||| ||||    
T  10432195 atactcctcatttttgctgctgaaacctaattaaaataactgaaaaacatgcaaaaa 10432251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 19603937 - 19603901
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaat 37  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  19603937 atactcctcctttttgctactaaaacctactgaaaat 19603901  T

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Target: chr7 (Bit Score: 55; Significance: 2e-22; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 5236943 - 5236873
Alignment:
Q  4 ctcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacat 74  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  5236943 ctcctcctttttgctgctaaaacctactgaaaataactgaaaaacatgctaagaataacgtaagatgacat 5236873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 23173765 - 23173683
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaac 83  Q
    ||||||||||||||||| |||||| |||| | ||||||||||||||| ||||||| ||||| |||||||||||||| ||||||    
T  23173765 atactcctcctttttgcagctaaaacctattaaaaataactgaaaaacatgctaagaataacgtaagatgacatgtcatcaac 23173683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 8977550 - 8977477
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacat 74  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||| ||||||| ||||| ||||||||||||    
T  8977550 atactcctcctttttgctgctaaaacctactgaaaatgattgaaaaagatgctaagaataacgtaagatgacat 8977477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 9078962 - 9078881
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactga-aaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    ||||||||||||||||||||| || |||||||||||||||||| |||| ||||||| ||||| |||||||||||||| ||||    
T  9078962 atactcctcctttttgctgctgaaacctactgaaaataactgaaaaaacatgctaagaataacgtaagatgacatgtcatca 9078881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 3585602 - 3585522
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||||||| ||||||||||||| |||||||||||| | ||||||| ||||||| |||||||||||||||| ||| ||||    
T  3585602 atactcctccattttgctgctaaaacctactgaaaatgattgaaaaacatgctaagaataatgtaagatgacttgtcatca 3585522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 26249155 - 26249073
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaac 83  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||||| ||||||  ||||| |||||||||| ||| ||||||    
T  26249155 atactcatcctttttgctgctaaaacctactgaaaatgactgaaaaacatgctatgaataacgtaagatgacctgtcatcaac 26249073  T

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Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 13280776 - 13280856
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||| | ||||||||||||||| |||||||||| ||| ||||||| ||||||| ||||| |||||||||||||| ||||    
T  13280776 atactcgttctttttgctgctaaaacctactgaaattaattgaaaaacatgctaagaataacgtaagatgacatgtcatca 13280856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 18986824 - 18986744
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    ||||||||||||||||||||||||  ||||||||| | ||||||||| ||||||| ||||| ||||||||| |||| ||||    
T  18986824 atactcctcctttttgctgctaaaatctactgaaattgactgaaaaacatgctaagaataacgtaagatgatatgtcatca 18986744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 19001452 - 19001372
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    ||||||||||||||||||||||||  ||||||||| | ||||||||| ||||||| ||||| ||||||||| |||| ||||    
T  19001452 atactcctcctttttgctgctaaaatctactgaaattgactgaaaaacatgctaagaataacgtaagatgatatgtcatca 19001372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 4450688 - 4450758
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatga 71  Q
    |||||||||| ||||| ||||||| |||||||||||| |||| |||| ||||||| ||||| |||||||||    
T  4450688 atactcctccattttgttgctaaaacctactgaaaatgactggaaaacatgctaagaataacgtaagatga 4450758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 8052508 - 8052439
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatga 71  Q
    ||||||||| |||||||||||||| |||||||||||| |||| |||| ||||||| ||||| |||||||||    
T  8052508 atactcctcatttttgctgctaaaacctactgaaaatgactg-aaaacatgctaagaataacgtaagatga 8052439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 11804715 - 11804785
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatga 71  Q
    ||||| |||||||||||||||||| |||||||||||| ||||||||| ||| ||  ||||| |||||||||    
T  11804715 atactgctcctttttgctgctaaaacctactgaaaatgactgaaaaacatgttatgaataacgtaagatga 11804785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 2565923 - 2566003
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||||||||||||  ||| ||| |||||||||||| ||||||||| ||||||| ||||  |||||||||| ||| ||||    
T  2565923 atactcctcctttttcttgccaaaacctactgaaaatgactgaaaaacatgctaagaatatcgtaagatgacttgtcatca 2566003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 19201483 - 19201555
Alignment:
Q  9 cctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||||||||||||| ||||||||||||||| |||||| ||| ||| |||||  ||||||||| ||| ||||    
T  19201483 cctttttgctgctaaatcctactgaaaataacagaaaaacatgttaagaataacataagatgacctgtcatca 19201555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 39270352 - 39270273
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    ||||||||||||||| |||||||| | |||| ||||| ||||||||| ||||| || |||| |||||||||||||| ||||    
T  39270352 atactcctcctttttactgctaaaacttactaaaaatgactgaaaaacatgct-aagataacgtaagatgacatgtcatca 39270273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 10332448 - 10332501
Alignment:
Q  28 tactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||||||| ||||||||| ||||||| ||||| |||||||||||||| ||||    
T  10332448 tactgaaaatgactgaaaaacatgctaagaataacgtaagatgacatgtcatca 10332501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 10414331 - 10414278
Alignment:
Q  29 actgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaa 82  Q
    |||||||||||| |||||| ||||||| |||||||||||||||| ||| |||||    
T  10414331 actgaaaataaccgaaaaacatgctaagaataatgtaagatgacctgtcatcaa 10414278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 23897257 - 23897338
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaa 82  Q
    |||||||||  |||||||| |||| | |||| ||| | ||||||||| ||| ||| |||||||||||||||||||| |||||    
T  23897257 atactcctctgttttgctggtaaaacatactaaaattgactgaaaaacatgttaagaataatgtaagatgacatgtcatcaa 23897338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 6039351 - 6039303
Alignment:
Q  27 ctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatg 75  Q
    ||||||||||| ||||||||| ||| ||| |||||||||||||||||||    
T  6039351 ctactgaaaatgactgaaaaacatgttaagaataatgtaagatgacatg 6039303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 10611730 - 10611810
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||| ||||||||||||||||| |||| | ||||| ||||| ||| ||||||| ||||| | ||||||| |||| ||||    
T  10611730 atactcatcctttttgctgctaaaacctatttaaaatcactgagaaacatgctaagaataacgcaagatgatatgtcatca 10611810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 19201392 - 19201332
Alignment:
Q  11 tttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatga 71  Q
    |||||||||||||| |||| | ||||| ||||||||| ||||||| ||||| |||||||||    
T  19201392 tttttgctgctaaagcctaataaaaattactgaaaaacatgctaagaataacgtaagatga 19201332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 16055332 - 16055265
Alignment:
Q  5 tcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgac 72  Q
    |||| |||||||||||||   |||||| |||  |||||||||| ||||||| ||||||||||||||||    
T  16055332 tccttctttttgctgctatttcctactaaaataaactgaaaaacatgctaagaataatgtaagatgac 16055265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 1848753 - 1848802
Alignment:
Q  180 cttgggttccaaccagcaaacccattggtgtttgatatcaagaatagtgt 229  Q
    ||||| |||||||||||||||||  || ||||||| ||||||||||||||    
T  1848753 cttggtttccaaccagcaaacccgatgatgtttgacatcaagaatagtgt 1848802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 19154846 - 19154915
Alignment:
Q  12 ttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||||| | || ||||||||||| | |||||||| ||||||| ||||| |||||||||| ||| ||||    
T  19154846 ttttgctggttaaacctactgaaaaaagctgaaaaacatgctaagaataacgtaagatgacctgtcatca 19154915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 20754245 - 20754314
Alignment:
Q  12 ttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||||| | || ||||||||||| | |||||||| ||||||| ||||| |||||||||| ||| ||||    
T  20754245 ttttgctggttaaacctactgaaaaaagctgaaaaacatgctaagaataacgtaagatgacctgtcatca 20754314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 3692829 - 3692769
Alignment:
Q  12 ttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgac 72  Q
    |||||||| |||| ||||| |||||| | ||||||||||||||  ||||| ||||||||||    
T  3692829 ttttgctggtaaaacctacagaaaatgaatgaaaaatatgctatgaataacgtaagatgac 3692769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 9767802 - 9767882
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||||||  |||| ||| |||| ||||||||||||  |||||||| ||||||| ||||| || ||||||| ||| ||||    
T  9767802 atactcctctatttttctggtaaaacctactgaaaatggctgaaaaacatgctaagaataacgtgagatgacctgtcatca 9767882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 23127962 - 23127903
Alignment:
Q  13 tttgctgctaaaccctactgaaaata-actgaaaaatatgctaaaaataatgtaagatgac 72  Q
    ||||||| |||| |||||| |||||| ||||||| ||||||||||||||| ||||||||||    
T  23127962 tttgctggtaaaacctact-aaaatagactgaaatatatgctaaaaataacgtaagatgac 23127903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 17384040 - 17384110
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatga 71  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||| ||||||| |||||||||||||||    
T  17384040 atactcctcctttttgctgctaaaacctaatgaaaataactgaaaaacatgctaagaataatgtaagatga 17384110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 14641649 - 14641717
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagat 69  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||| |||||||    
T  14641649 atactcctcctttttgctgctaaaacctactgaaaataactgaaaaacatgctaagaataacgtaagat 14641717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 9519749 - 9519819
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatga 71  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||| ||||||||||||| |||||||||    
T  9519749 atactcctcctttttgctgctaaatactactgaaaataactaaaaaacatgctaaaaataacgtaagatga 9519819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 17822104 - 17822028
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataact-gaaaaatatgctaaaaataatgtaagatgacatgt 76  Q
    |||||||||||||||||||||||| |||| ||||||||||| |||||| ||||||| ||||| ||||||||||||||    
T  17822104 atactcctcctttttgctgctaaatcctattgaaaataactagaaaaacatgctaagaataacgtaagatgacatgt 17822028  T

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Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 4340681 - 4340751
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatga 71  Q
    ||||||||||||||| |||||||| ||||||||||||| |||||||| || |||||||||| |||||||||    
T  4340681 atactcctcctttttactgctaaaacctactgaaaatatctgaaaaacatactaaaaataacgtaagatga 4340751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 14076413 - 14076495
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaac 83  Q
    ||||||||||| |||||||||||| | |||||||||||||||||||  ||||||| ||||| |||||||||| ||| ||||||    
T  14076413 atactcctcctctttgctgctaaatcatactgaaaataactgaaaaccatgctaagaataacgtaagatgacctgtcatcaac 14076495  T

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Target: chr6; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 22404334 - 22404253
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaa 82  Q
    |||||||||||||||||||||||| |||||||||| | ||||||||| ||| ||| ||||| | |||||||||||| |||||    
T  22404334 atactcctcctttttgctgctaaaacctactgaaatttactgaaaaacatgataagaataacgaaagatgacatgtcatcaa 22404253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 14078054 - 14078137
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactg-aaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaac 83  Q
    ||||||||||| |||||||||||| ||||||| ||||||||| ||||  ||||||| |||||||||||||||| ||| ||||||    
T  14078054 atactcctcctctttgctgctaaatcctactgaaaaataactaaaaaccatgctaagaataatgtaagatgacctgtcatcaac 14078137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 14723701 - 14723771
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatga 71  Q
    |||||||||||||||||| ||||| |||| ||||||||||||||||  ||||||| ||||| |||||||||    
T  14723701 atactcctcctttttgctcctaaatcctattgaaaataactgaaaagcatgctaagaataacgtaagatga 14723771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 19577617 - 19577563
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaa 55  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||| |||||||    
T  19577617 atactcctcctttttgctgctaaaacctactgaaaataactaaaaaacatgctaa 19577563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 1636656 - 1636720
Alignment:
Q  7 ctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatga 71  Q
    ||||||||||| |||||| |||||| ||||||||||||||| ||||||| ||||| |||||||||    
T  1636656 ctcctttttgccgctaaaacctactaaaaataactgaaaaacatgctaagaataacgtaagatga 1636720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 21152571 - 21152511
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataa 61  Q
    ||||||||||||||||||||| || |||||| ||||||| ||||||| |||||||||||||    
T  21152571 atactcctcctttttgctgcttaatcctactaaaaataattgaaaaacatgctaaaaataa 21152511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 24469815 - 24469886
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgac 72  Q
    |||||||||||||||||||  ||| |||||||||||| | ||||||| || |||||||||| ||||||||||    
T  24469815 atactcctcctttttgctgtcaaaacctactgaaaatgattgaaaaacatactaaaaataacgtaagatgac 24469886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 24480041 - 24480112
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgac 72  Q
    |||||||||||||||||||| ||| |||||||||||| | ||||| | ||||||| ||||| ||||||||||    
T  24480041 atactcctcctttttgctgccaaaacctactgaaaatgattgaaatacatgctaagaataacgtaagatgac 24480112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 21760483 - 21760406
Alignment:
Q  5 tcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaa 82  Q
    ||||||||||||||||||||  ||| ||||||| ||||||||||||||||| |||||  |||| |||| ||| |||||    
T  21760483 tcctcctttttgctgctaaattctattgaaaatgactgaaaaatatgctaagaataacttaaggtgacctgtcatcaa 21760406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 22845931 - 22845862
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatg 70  Q
    |||||||||||||||| || |||| | |||||||||||||||||||| ||||||| | ||| ||||||||    
T  22845931 atactcctcctttttgttgttaaaacatactgaaaataactgaaaaacatgctaagagtaacgtaagatg 22845862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 11136939 - 11137002
Alignment:
Q  5 tcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaaga 68  Q
    |||||||||||||| ||||| |||||| |||  |||||||||| ||||||| ||||||||||||    
T  11136939 tcctcctttttgctactaaatcctactaaaataaactgaaaaacatgctaagaataatgtaaga 11137002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 19594056 - 19594010
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaa 47  Q
    ||||||||||||||||| |||||| |||||||||||||||| |||||    
T  19594056 atactcctcctttttgcagctaaaacctactgaaaataactaaaaaa 19594010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 21687198 - 21687128
Alignment:
Q  12 ttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaa 82  Q
    |||||||| |||| |||||| ||| | ||||||||| ||||||| ||||| |||||||||||||| |||||    
T  21687198 ttttgctggtaaaacctactaaaattgactgaaaaacatgctaagaataacgtaagatgacatgtcatcaa 21687128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 9841036 - 9841106
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatga 71  Q
    ||||||||||||| ||||| |||| |||||||||||| ||| ||| | ||| ||| ||||| |||||||||    
T  9841036 atactcctcctttctgctggtaaaacctactgaaaatgactaaaacacatgttaagaataacgtaagatga 9841106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 20004258 - 20004188
Alignment:
Q  3 actcctcctttttgctgctaaaccctactgaaaataactgaaaaat-atgctaaaaataatgtaagatgac 72  Q
    ||||||| |||||||| ||||| |||||| |||  ||||||||||| ||||||| ||||| ||||||||||    
T  20004258 actcctcttttttgctactaaatcctactaaaataaactgaaaaatcatgctaacaataacgtaagatgac 20004188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 2588343 - 2588384
Alignment:
Q  31 tgaaaataactgaaaaatatgctaaaaataatgtaagatgac 72  Q
    ||||||| |||||||||||||||||||| || ||||||||||    
T  2588343 tgaaaatgactgaaaaatatgctaaaaacaacgtaagatgac 2588384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 9848180 - 9848260
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||| |||||||||||  |||| |||||| ||||| ||||||||| ||| ||| ||||| || | ||||||||| ||||    
T  9848180 atactcatcctttttgctaataaaacctactaaaaatgactgaaaaacatgttaagaataacgtcaaatgacatgtcatca 9848260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 17847797 - 17847857
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataa 61  Q
    |||||| || |||||||||||||| | |||| ||||||||| ||||| ||||||| |||||    
T  17847797 atactcttcatttttgctgctaaaacttacttaaaataactaaaaaacatgctaagaataa 17847857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 21036957 - 21037017
Alignment:
Q  11 tttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatga 71  Q
    |||||| ||||||| |||||| ||||||||||||||| ||| ||| ||| | |||||||||    
T  21036957 tttttgttgctaaaacctactaaaaataactgaaaaacatgataagaatgacgtaagatga 21037017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 26820896 - 26820948
Alignment:
Q  20 ctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgac 72  Q
    ||||| |||| ||||||||||||||||| ||||||| | ||| ||||||||||    
T  26820896 ctaaaacctaatgaaaataactgaaaaacatgctaagagtaacgtaagatgac 26820948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 7e-22; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 19912597 - 19912678
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaa 82  Q
    ||||||||| |||||||||||||| |||||||||||| ||||||||||||||||| ||||| |||||||||| ||| |||||    
T  19912597 atactcctcttttttgctgctaaaacctactgaaaatgactgaaaaatatgctaagaataacgtaagatgacctgtcatcaa 19912678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 34276517 - 34276437
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||| |||| ||||| ||| ||||    
T  34276517 atactcctcctttttgctgctaaaacctactgaaaatgactgaaaaatatgctaagaataacgtaaaatgacctgtcatca 34276437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 12517307 - 12517387
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||||||||||||||| ||||| |||||||||||| ||||||||| ||||||| ||||| |||||||||| ||| ||||    
T  12517307 atactcctcctttttgctactaaaacctactgaaaatgactgaaaaagatgctaagaataacgtaagatgacctgtcatca 12517387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 8115374 - 8115305
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatg 70  Q
    |||||||||||||||||| ||||| |||||| |||||||||| |||| ||||||||||||| ||||||||    
T  8115374 atactcctcctttttgctactaaaacctactcaaaataactggaaaacatgctaaaaataacgtaagatg 8115305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 18457191 - 18457111
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||||||||||||||||||||| ||||||||||||||||||| || || |||| ||||  |||||||||| ||| ||||    
T  18457191 atactcctcctttttgctgctaaaacctactgaaaataactgaataacatcctaagaatagcgtaagatgacctgtcatca 18457111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 8145265 - 8145336
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgac 72  Q
    ||||||||| |||||||||||||| |||||||||| | | ||||||| ||||||| ||||||||||||||||    
T  8145265 atactcctcatttttgctgctaaaacctactgaaattgattgaaaaacatgctaagaataatgtaagatgac 8145336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 25851028 - 25850957
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgac 72  Q
    ||||||||||||| |||||||||| |||||| ||||||||||||||| ||||||| |||||  |||||||||    
T  25851028 atactcctcctttctgctgctaaatcctactaaaaataactgaaaaacatgctaagaataacataagatgac 25850957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 26092950 - 26093002
Alignment:
Q  29 actgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||| ||||    
T  26092950 actgaaaataattgaaaaatatgctaagaataatgtaagatgacatgtcatca 26093002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 22247014 - 22247088
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgt 76  Q
    |||||||||  |||||||| |||| |||||||||||| ||||||||| ||||||| ||||| ||||||||||||||    
T  22247014 atactcctctattttgctggtaaaacctactgaaaatgactgaaaaa-atgctaagaataacgtaagatgacatgt 22247088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 22470480 - 22470401
Alignment:
Q  3 actcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaa 82  Q
    |||||||  |||||||| |||| | |||||||||| ||||||||| ||||||| ||||| |||||||||||||| |||||    
T  22470480 actcctctgttttgctggtaaaacatactgaaaatgactgaaaaacatgctaagaataacgtaagatgacatgtcatcaa 22470401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 14977823 - 14977892
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatg 70  Q
    |||||||||||||||||| ||||| | |||| |||  |||||||||||||||||| ||||| ||||||||    
T  14977823 atactcctcctttttgctactaaatcatactaaaataaactgaaaaatatgctaagaataacgtaagatg 14977892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 12771282 - 12771211
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgac 72  Q
    |||||| || ||||||||||||||   |||||||||| ||||||||| ||||||| ||||| ||||||||||    
T  12771282 atactcatcatttttgctgctaaaatatactgaaaatgactgaaaaacatgctaagaataacgtaagatgac 12771211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 16242273 - 16242193
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaa 82  Q
    |||||||| |||||| |||||||| | |||| ||||| | ||||||||||||||| ||||| |||||||||| ||| |||||    
T  16242273 atactccttcttttttctgctaaaac-tactaaaaatgagtgaaaaatatgctaagaataacgtaagatgacctgtcatcaa 16242193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 2508797 - 2508725
Alignment:
Q  3 actcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatg 75  Q
    |||| ||||||| |||| |||| | |||||||||| ||||||||| || |||| ||||| |||||||||||||    
T  2508797 actcatccttttcgctgttaaaacttactgaaaatgactgaaaaacatactaagaataacgtaagatgacatg 2508725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 12372412 - 12372344
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagat 69  Q
    ||||||||||||||||||  |||| |||||||||||| | ||||||| ||||||| ||| | |||||||    
T  12372412 atactcctcctttttgctcgtaaaacctactgaaaatgattgaaaaaaatgctaagaattacgtaagat 12372344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 20891714 - 20891654
Alignment:
Q  12 ttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgac 72  Q
    ||||| || |||| |||||||||||  ||||||||||||||||| ||||| ||||||||||    
T  20891714 ttttgttggtaaaacctactgaaaacgactgaaaaatatgctaagaataacgtaagatgac 20891654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 52935602 - 52935542
Alignment:
Q  12 ttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgac 72  Q
    |||||||| |||| |||||||||||| | ||||||| ||||||| ||||| ||||||||||    
T  52935602 ttttgctggtaaaacctactgaaaatgattgaaaaacatgctaagaataacgtaagatgac 52935542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 19170221 - 19170146
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgt 76  Q
    ||||||||| ||||| |||||||| || ||||||| | || |||||| ||||||| |||| || ||||||||||||    
T  19170221 atactcctcgttttttctgctaaaaccaactgaaattgaccgaaaaacatgctaagaatagtgcaagatgacatgt 19170146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 27073969 - 27074040
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgac 72  Q
    |||||||||| |||||||||||   |||| | |||  |||||||||| ||||||||||||| ||||||||||    
T  27073969 atactcctccattttgctgctatttcctattaaaataaactgaaaaacatgctaaaaataacgtaagatgac 27074040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 19387937 - 19387879
Alignment:
Q  3 actcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataa 61  Q
    |||||||  |||||||| |||| |||||||||||| ||||||||| | |||||||||||    
T  19387937 actcctctattttgctggtaaaacctactgaaaatgactgaaaaacaagctaaaaataa 19387879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 16228424 - 16228343
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaa 82  Q
    |||||||||||||||| |||||   |||||| |||  |||||||||  ||||||| ||||| |||||||||| ||| |||||    
T  16228424 atactcctcctttttgttgctatttcctactaaaataaactgaaaagcatgctaagaataacgtaagatgacctgtcatcaa 16228343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 76
Target Start/End: Complemental strand, 51118518 - 51118485
Alignment:
Q  43 aaaaatatgctaaaaataatgtaagatgacatgt 76  Q
    ||||||||||||||||||| ||||||||||||||    
T  51118518 aaaaatatgctaaaaataacgtaagatgacatgt 51118485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 1096836 - 1096761
Alignment:
Q  5 tcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||||||||||||||||| |  ||||||||| ||| ||||| |||| || ||||| |||||||||| ||| ||||    
T  1096836 tcctcctttttgctgctaaaactgactgaaaatgact-aaaaacatgcaaagaataacgtaagatgacctgtcatca 1096761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 2166114 - 2166078
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaat 37  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  2166114 atactcctcctttttgttgctaaaacctactgaaaat 2166078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 19909109 - 19909029
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||||| |||||||||||||   |||||| | |  |||||||||| || ||| |||||| |||||||||||||| ||||    
T  19909109 atactccttctttttgctgctatttcctactaatataaactgaaaaacattctacaaataacgtaagatgacatgtcatca 19909029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 20021897 - 20021817
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||||||| |||||||||||   | |||| |||  |||||||||| ||||||| | ||| |||||||||||||| ||||    
T  20021897 atactcctccattttgctgctatttcatactaaaataaactgaaaaacatgctaagagtaacgtaagatgacatgtcatca 20021817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 27852663 - 27852603
Alignment:
Q  21 taaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||| |||||||||||| ||| ||| | ||||||||||||| |||||| ||||||| ||||    
T  27852663 taaaacctactgaaaatgactaaaagacatgctaaaaataacgtaagacgacatgtcatca 27852603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 1e-20; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 18446939 - 18446868
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgac 72  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||| ||| ||||||||| ||||||||||    
T  18446939 atactcctcctttttgctgctaaatcctactggaaataactgaaaaacatggtaaaaataacgtaagatgac 18446868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 13313351 - 13313266
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaactac 86  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||||| ||||||| ||||| |||||| ||||||| |||| ||||    
T  13313351 atactcctcctttttgctgctaaaacctattgaaaatgactgaaaaacatgctaagaataacgtaagacgacatgtcatcatctac 13313266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 15176512 - 15176441
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgac 72  Q
    |||||||||||||||||||||||| |||||||||| | ||||||| | ||||||| ||||||||||||||||    
T  15176512 atactcctcctttttgctgctaaaacctactgaaattgactgaaacacatgctaagaataatgtaagatgac 15176441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 17510921 - 17510992
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgac 72  Q
    ||||||||||||||||| |||||| |||||||||| | ||||||||| ||||||| ||||||||||||||||    
T  17510921 atactcctcctttttgcagctaaaacctactgaaagtgactgaaaaacatgctaagaataatgtaagatgac 17510992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 26888503 - 26888573
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatga 71  Q
    |||||||||||||||| ||||||| |||||| ||||||| ||||||||||||||||||||| |||| ||||    
T  26888503 atactcctcctttttgttgctaaaacctactaaaaataaatgaaaaatatgctaaaaataacgtaaaatga 26888573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 20400351 - 20400431
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||||||||||||||||||||| || ||||||||| ||||||||  ||||||| ||||| |||||||||| ||| ||||    
T  20400351 atactcctcctttttgctgctaaaacccactgaaaatgactgaaaagcatgctaagaataacgtaagatgacctgtcatca 20400431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 19705003 - 19705083
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||||| |||| ||||| |||| |||||||||||| ||||||||| || |||| ||||| |||||||||||||| ||||    
T  19705003 atactccttctttatgctgttaaaacctactgaaaatgactgaaaaacatactaagaataacgtaagatgacatgtcatca 19705083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 24090958 - 24090892
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaag 67  Q
    |||||| ||||||||||||||||| |||| | ||||||||||||||| ||||||| ||||| |||||    
T  24090958 atactcttcctttttgctgctaaaacctaattaaaataactgaaaaacatgctaagaataacgtaag 24090892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 29765465 - 29765391
Alignment:
Q  8 tcctttttgctgctaaaccctactgaaaataact-gaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    ||||||||||||||||| ||||||||||||||||  ||||| ||||||| ||||| |||||||||| ||| ||||    
T  29765465 tcctttttgctgctaaaacctactgaaaataactaaaaaaacatgctaagaataacgtaagatgacctgtcatca 29765391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 24520075 - 24520022
Alignment:
Q  8 tcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataa 61  Q
    ||||||||||| ||||| |||||||||||||||||||||| ||||||| |||||    
T  24520075 tcctttttgctactaaatcctactgaaaataactgaaaaacatgctaagaataa 24520022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 19265839 - 19265919
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||||||||||||| || |||| |||||| |||  |||||||||| ||||||| ||||| |||||||||| ||| ||||    
T  19265839 atactcctcctttttgttgttaaatcctactaaaataaactgaaaaacatgctaagaataacgtaagatgacctgtcatca 19265919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 24389773 - 24389853
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    ||||||||| |||||| ||||||| |||||||||||||||| |||||  | |||| ||||| |||||||||| ||| ||||    
T  24389773 atactcctcatttttgttgctaaaacctactgaaaataactaaaaaacttactaagaataacgtaagatgacctgtcatca 24389853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24583251 - 24583191
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataa 61  Q
    ||||||||||||||||||||||||  ||||| ||||| ||||||||| ||||||| |||||    
T  24583251 atactcctcctttttgctgctaaaatctactaaaaatgactgaaaaacatgctaagaataa 24583191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 25227300 - 25227356
Alignment:
Q  25 ccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||||||||||||||||||||  |||||| |||||||||||||||| ||| ||||    
T  25227300 ccctactgaaaataactgaaaaacctgctaagaataatgtaagatgacctgtcatca 25227356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 28621621 - 28621703
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaac 83  Q
    |||||| | ||||||  ||||||| |||| ||||||||||||||||| ||||||| ||||| || ||||||| ||| ||||||    
T  28621621 atactcattcttttttatgctaaaacctaatgaaaataactgaaaaacatgctaagaataacgttagatgacctgtcatcaac 28621703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 30117727 - 30117670
Alignment:
Q  12 ttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagat 69  Q
    |||||||| |||| |||||||||||| | ||||||| ||||||||||||| |||||||    
T  30117727 ttttgctggtaaaacctactgaaaatgaatgaaaaacatgctaaaaataacgtaagat 30117670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17100286 - 17100226
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataa 61  Q
    ||||| |||||||||||||||||| |||  ||||||||| ||||||| ||||||| |||||    
T  17100286 atacttctcctttttgctgctaaaaccttatgaaaataattgaaaaacatgctaagaataa 17100226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 24380433 - 24380353
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||||||  || ||||| |||| |||||||||| | | ||||||| ||||||| ||||| |||||||||||||| ||||    
T  24380433 atactcctctgttctgctggtaaaacctactgaaattgagtgaaaaacatgctaagaataacgtaagatgacatgttatca 24380353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 33 - 76
Target Start/End: Original strand, 11222342 - 11222385
Alignment:
Q  33 aaaataactgaaaaatatgctaaaaataatgtaagatgacatgt 76  Q
    ||||| ||||||||||||| | ||||||||||||||||||||||    
T  11222342 aaaatgactgaaaaatatgttgaaaataatgtaagatgacatgt 11222385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 17835580 - 17835631
Alignment:
Q  21 taaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgac 72  Q
    |||| |||||||||| |||||||||||||| |||| ||||| ||||||||||    
T  17835580 taaaacctactgaaattaactgaaaaatatactaagaataacgtaagatgac 17835631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 21695468 - 21695413
Alignment:
Q  26 cctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||||||| | ||||||||| ||||||| ||||| |||||||||||||| ||||    
T  21695468 cctactgaaattgactgaaaaacatgctaagaataacgtaagatgacatgtcatca 21695413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 15557409 - 15557459
Alignment:
Q  26 cctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgt 76  Q
    |||||||||||| ||||||||| |  |||| ||||||||||||||||||||    
T  15557409 cctactgaaaatgactgaaaaacagactaagaataatgtaagatgacatgt 15557459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 23867909 - 23867829
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    ||||||||| | |||||||||||| |||||| |||||  |||||||| || |||| ||| | |||||||||| ||| ||||    
T  23867909 atactcctcgtctttgctgctaaaacctactaaaaatgcctgaaaaacatactaagaattacgtaagatgacctgtcatca 23867829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 24105577 - 24105525
Alignment:
Q  20 ctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgac 72  Q
    ||||| |||||||| ||||||||||||| |||||||  |||| ||||||||||    
T  24105577 ctaaatcctactgagaataactgaaaaacatgctaagcataacgtaagatgac 24105525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 12210282 - 12210353
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgac 72  Q
    |||||||||||||||||||||||| |||||||||| | ||||||||| ||||||| ||||||||||||||||    
T  12210282 atactcctcctttttgctgctaaaacctactgaaattgactgaaaaacatgctaagaataatgtaagatgac 12210353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 16180734 - 16180799
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaa 66  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||| ||||||| ||||||||||    
T  16180734 atactcctcctttttgttgctaaactctactgaaaataactgaaaaacatgctaagaataatgtaa 16180799  T

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Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 22624633 - 22624714
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaa 82  Q
    |||||||||||||||||||||||| |||||| |||  |||| ||||| ||||||| |||||||||||||||||||| |||||    
T  22624633 atactcctcctttttgctgctaaatcctactaaaataaacttaaaaacatgctaagaataatgtaagatgacatgtcatcaa 22624714  T

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Target: chr1; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 15542388 - 15542308
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||||| ||||||||||||||| |||||||||||| ||||||||| ||| ||| ||||| |||||||||||||| ||||    
T  15542388 atactcctactttttgctgctaaaacctactgaaaatgactgaaaaacatgttaagaataacgtaagatgacatgtcatca 15542308  T

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Target: chr1; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 729153 - 729224
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgac 72  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||  ||||||| ||||| ||||||||||    
T  729153 atactcctcctttttgctgctaaaacctactgaaaatgactgaaaagcatgctaagaataacgtaagatgac 729224  T

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Target: chr1; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 15158868 - 15158803
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaa 66  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||| ||||||| ||||| ||||    
T  15158868 atactcctcctttttgctgctaaatcctacttaaaataactgaaaaacatgctaagaataacgtaa 15158803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 21450784 - 21450864
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||||||||||||||||||||| |||||||||||| ||||| ||| |||||||| ||||  ||||||||| ||| ||||    
T  21450784 atactcctcctttttgctgctaaaacctactgaaaatgactgagaaacatgctaaagataacttaagatgacctgtcatca 21450864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 27973320 - 27973388
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagat 69  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||||| ||||||| ||||| |||||||    
T  27973320 atactcctcctttttgctgttaaaacctactgaaaatgactgaaaaacatgctaagaataacgtaagat 27973388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 28009766 - 28009838
Alignment:
Q  4 ctcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgt 76  Q
    ||||||||||||||||||||| | ||  |||||| ||||||||| ||||||| ||||||||||||||||||||    
T  28009766 ctcctcctttttgctgctaaaacttagcgaaaatgactgaaaaacatgctaagaataatgtaagatgacatgt 28009838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 26611411 - 26611329
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaac 83  Q
    |||||||||||||||||||||||| |||||| | | ||| ||||||| ||||||| ||||| |||||||||| ||| ||||||    
T  26611411 atactcctcctttttgctgctaaatcctactaatattaattgaaaaacatgctaagaataacgtaagatgacctgtcatcaac 26611329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 21663170 - 21663089
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaa 82  Q
    ||||| |||||||||| || |||| |||||||||||| ||||||||| ||||||| ||||| |||||||||| ||| |||||    
T  21663170 atacttctcctttttgatgttaaaacctactgaaaatgactgaaaaacatgctaagaataacgtaagatgacctgtcatcaa 21663089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 18527576 - 18527496
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    ||||||||||||||||| |||||| |||| ||||||| | ||||||| ||||||| ||||| |||||||||| ||| ||||    
T  18527576 atactcctcctttttgccgctaaaacctattgaaaatgagtgaaaaagatgctaagaataacgtaagatgacttgtcatca 18527496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 26647437 - 26647357
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||||||| ||||| || |||| |||||||||||  ||||||||||||||||| ||||| |||||||||| ||| ||||    
T  26647437 atactcctccgttttgttggtaaaacctactgaaaaagactgaaaaatatgctaagaataacgtaagatgacctgtcatca 26647357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 10063010 - 10062960
Alignment:
Q  31 tgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    ||||||||||| |||||||| |||||||||| |||||||||||||||||||    
T  10063010 tgaaaataacttaaaaatatactaaaaataacgtaagatgacatgtgatca 10062960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 12 - 82
Target Start/End: Original strand, 24901237 - 24901307
Alignment:
Q  12 ttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaa 82  Q
    |||||||| ||||  ||||||||||| | ||||||||||||||||||||| |||||||||| ||| |||||    
T  24901237 ttttgctggtaaaatctactgaaaatgattgaaaaatatgctaaaaataacgtaagatgacttgtaatcaa 24901307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 14782551 - 14782628
Alignment:
Q  5 tcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaa 82  Q
    |||||||||||||||||||| |||| ||||| | | ||||||| ||||||| ||||| |||||||||| ||| |||||    
T  14782551 tcctcctttttgctgctaaaacctattgaaattgagtgaaaaacatgctaagaataacgtaagatgacctgtcatcaa 14782628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 22507462 - 22507381
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataact-gaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    ||||||||||||||||| |||||| |||| |||||||||||  ||||| ||||||| ||||| ||||||| |||||| ||||    
T  22507462 atactcctcctttttgccgctaaaacctaatgaaaataactaaaaaaacatgctaagaataacgtaagatcacatgtcatca 22507381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 25402515 - 25402435
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    ||||||||| |||||||||||||| |||||| |||  |||||||||| ||||||| ||||| | |||||||| ||| ||||    
T  25402515 atactcctcttttttgctgctaaatcctactaaaataaactgaaaaacatgctaagaataacgcaagatgacctgtcatca 25402435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 26652616 - 26652672
Alignment:
Q  26 cctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaa 82  Q
    |||||| ||||||||||||||| ||||||||||||| ||| |||||||||| |||||    
T  26652616 cctactaaaaataactgaaaaacatgctaaaaataacgtaggatgacatgtcatcaa 26652672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 11845281 - 11845231
Alignment:
Q  21 taaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatga 71  Q
    |||| |||||| ||||||||||||||||||||||| ||||| |||||||||    
T  11845281 taaaacctactaaaaataactgaaaaatatgctaagaataacgtaagatga 11845231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 22426595 - 22426514
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaa 82  Q
    ||||||||||||||||||||||   |||||| |||  |||||||||| ||||||| ||| | |||||||||| ||| |||||    
T  22426595 atactcctcctttttgctgctatttcctactaaaataaactgaaaaacatgctaagaatgacgtaagatgacctgtcatcaa 22426514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 17016862 - 17016814
Alignment:
Q  33 aaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    ||||||||||||||||||||||| ||||| || ||||||||||| ||||    
T  17016862 aaaataactgaaaaatatgctaagaataacgtgagatgacatgttatca 17016814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 18734665 - 18734597
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagat 69  Q
    ||||||||||||||||||| |||| |||||| ||   |||||||||| ||||||| ||||| |||||||    
T  18734665 atactcctcctttttgctgttaaatcctactaaagtaaactgaaaaacatgctaagaataacgtaagat 18734597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 18832232 - 18832312
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||||||||||||||||||||  |||| | ||| ||||||||||| ||||||| || ||  ||||||||| ||| ||||    
T  18832232 atactcctcctttttgctgctaagacctaattaaagtaactgaaaaacatgctaagaagaacctaagatgacctgtcatca 18832312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 26581620 - 26581660
Alignment:
Q  31 tgaaaataactgaaaaatatgctaaaaataatgtaagatga 71  Q
    ||||||||||||||||| ||||||| |||||||||||||||    
T  26581620 tgaaaataactgaaaaacatgctaagaataatgtaagatga 26581660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 20107871 - 20107942
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgac 72  Q
    ||||||||||||||||||||||   |||||| |||  ||| |||||| ||||||| ||| ||||||||||||    
T  20107871 atactcctcctttttgctgctatttcctactaaaataaacagaaaaacatgctaagaatgatgtaagatgac 20107942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 21536954 - 21536915
Alignment:
Q  33 aaaataactgaaaaatatgctaaaaataatgtaagatgac 72  Q
    ||||| ||||||||||||||||||||||| ||||||||||    
T  21536954 aaaatgactgaaaaatatgctaaaaataacgtaagatgac 21536915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 16363640 - 16363710
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatga 71  Q
    |||||||||  ||||| || ||||  ||||||||||| |||| |||| ||||||||||||| |||||||||    
T  16363640 atactcctctattttgttggtaaaaactactgaaaatgactggaaaacatgctaaaaataacgtaagatga 16363710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 16817186 - 16817108
Alignment:
Q  3 actcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    ||||||||||||||||||||   |||||| |||  |||||||||| ||| ||| ||||| |||||||||| ||| ||||    
T  16817186 actcctcctttttgctgctatttcctactaaaataaactgaaaaacatgttaagaataacgtaagatgacttgtcatca 16817108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 7221563 - 7221615
Alignment:
Q  31 tgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaac 83  Q
    ||||||| ||||||||| ||| ||| ||||| |||||||||||||| ||||||    
T  7221563 tgaaaatgactgaaaaacatgttaagaataacgtaagatgacatgttatcaac 7221615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 20033158 - 20033118
Alignment:
Q  41 tgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    ||||||||||||||||||||| ||||||| |||||| ||||    
T  20033158 tgaaaaatatgctaaaaataacgtaagataacatgtcatca 20033118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 24689296 - 24689336
Alignment:
Q  43 aaaaatatgctaaaaataatgtaagatgacatgtgatcaac 83  Q
    |||||||| |||||||||||||||||||||| || ||||||    
T  24689296 aaaaatatactaaaaataatgtaagatgacaagtcatcaac 24689336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 4e-20; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 19003845 - 19003763
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaac 83  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||| |||| || ||||| ||||||| |||||| ||||||    
T  19003845 atactcatcctttttgctgctaaaacctactgaaaataactgaaaaacatgccaagaataacgtaagatcacatgtcatcaac 19003763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 34132103 - 34132177
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatg 75  Q
    ||||| |||||||||||||||||| |||| |||||||| |||||||| ||||||| ||||| |||||||||||||    
T  34132103 atacttctcctttttgctgctaaaacctaatgaaaatagctgaaaaacatgctaagaataaagtaagatgacatg 34132177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 23214905 - 23214825
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||||||||||||| ||||||||  || ||||||||||||||||| ||||||| ||||| |||||||||| ||| ||||    
T  23214905 atactcctcctttttgttgctaaactgtattgaaaataactgaaaaacatgctaagaataacgtaagatgacctgtcatca 23214825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23387627 - 23387574
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgcta 54  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||| ||||||    
T  23387627 atactcctcctttttgctgctaaaacctactgaaaatgactgaaaaacatgcta 23387574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 19053118 - 19053198
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||||||||||||||||  |||  ||||||||||||||||| ||| ||||||| ||||| |||| ||||||||| ||||    
T  19053118 atactcctcctttttgctgtaaaaatctactgaaaataactgataaacatgctaagaataacgtaaaatgacatgtcatca 19053198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 20860356 - 20860436
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    ||||| |||||||||||||||||| |||||||||||| | ||||||| ||||||| | ||| |||||||||| ||| ||||    
T  20860356 atacttctcctttttgctgctaaaacctactgaaaattaatgaaaaacatgctaacagtaacgtaagatgacctgtcatca 20860436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 82
Target Start/End: Original strand, 29987984 - 29988055
Alignment:
Q  11 tttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaa 82  Q
    ||||||||||||||  ||||| ||||| ||||||||| ||||||||||||| |||||||||| ||| |||||    
T  29987984 tttttgctgctaaaatctactaaaaatgactgaaaaacatgctaaaaataacgtaagatgacctgtcatcaa 29988055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 15691304 - 15691360
Alignment:
Q  20 ctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgt 76  Q
    ||||| |||||||||||| ||| ||||||||||||| ||||| ||||||||||||||    
T  15691304 ctaaaacctactgaaaatgactaaaaaatatgctaagaataacgtaagatgacatgt 15691360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 32415878 - 32415830
Alignment:
Q  33 aaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    ||||| ||||||||||||||||| |||||||||||||||||||| ||||    
T  32415878 aaaattactgaaaaatatgctaagaataatgtaagatgacatgtcatca 32415830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 18832239 - 18832310
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgac 72  Q
    |||||||||  ||||| || |||| |||| ||||||  ||||||||| ||||||||||||||||||||||||    
T  18832239 atactcctctgttttgttggtaaaacctattgaaaaagactgaaaaacatgctaaaaataatgtaagatgac 18832310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 25400814 - 25400747
Alignment:
Q  5 tcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgac 72  Q
    ||||||||||| |||||||| |||| ||||||| ||||||||| ||||||| ||||| |||| |||||    
T  25400814 tcctcctttttcctgctaaaacctaatgaaaatgactgaaaaacatgctaagaataacgtaaaatgac 25400747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 25920848 - 25920918
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatga 71  Q
    |||||| ||| |||||||| |||| |||||||||||| ||  ||||||||||||| ||||| |||||||||    
T  25920848 atactcatccgttttgctggtaaatcctactgaaaatgacaaaaaaatatgctaagaataacgtaagatga 25920918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 28666509 - 28666579
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatga 71  Q
    ||||| |||||||||||||||||| |||||||||||| | ||||||| ||| ||| |||||  ||||||||    
T  28666509 atacttctcctttttgctgctaaaacctactgaaaatgaatgaaaaacatgataagaataacataagatga 28666579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 20102941 - 20102892
Alignment:
Q  33 aaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaa 82  Q
    ||||| ||||||||||||||||||||||| |||||||| ||||| |||||    
T  20102941 aaaatgactgaaaaatatgctaaaaataacgtaagatggcatgtcatcaa 20102892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 23266853 - 23266913
Alignment:
Q  21 taaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||| |||||||||||| ||| ||||| |||| ||||||||||||||||||| ||| ||||    
T  23266853 taaaacctactgaaaatgactaaaaaacatgccaaaaataatgtaagatgacctgtcatca 23266913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 24142424 - 24142504
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    ||||||||| |||||| |||||||  ||||| |||  |||||||||| ||||||| |||||  ||||||||||||| ||||    
T  24142424 atactcctcttttttgatgctaaattctactaaaataaactgaaaaacatgctaagaataacataagatgacatgtcatca 24142504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 24658380 - 24658308
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaa-tatgctaaaaataatgtaagatgac 72  Q
    |||||||||||||||||||||||| |||||| ||||| | |||||||  | | ||||||||| ||||||||||    
T  24658380 atactcctcctttttgctgctaaaacctactaaaaatgattgaaaaacaaagttaaaaataacgtaagatgac 24658308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 19761636 - 19761577
Alignment:
Q  26 cctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaacta 85  Q
    |||||||||||| |||||| || ||||||| ||||| |||||||||| ||| ||||||||    
T  19761636 cctactgaaaatgactgaataacatgctaataataacgtaagatgacctgtcatcaacta 19761577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 33 - 72
Target Start/End: Original strand, 20593222 - 20593261
Alignment:
Q  33 aaaataactgaaaaatatgctaaaaataatgtaagatgac 72  Q
    ||||||| ||||||||||||| ||||||||||||||||||    
T  20593222 aaaataagtgaaaaatatgctgaaaataatgtaagatgac 20593261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 28280342 - 28280381
Alignment:
Q  43 aaaaatatgctaaaaataatgtaagatgacatgtgatcaa 82  Q
    ||||||||||||||||||| |||||||||||||| |||||    
T  28280342 aaaaatatgctaaaaataacgtaagatgacatgtcatcaa 28280381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 20680628 - 20680668
Alignment:
Q  33 aaaataactgaaaaatatgctaaaaataatgtaagatgaca 73  Q
    ||||||||| ||||| |||||||||||||| ||||||||||    
T  20680628 aaaataactaaaaaacatgctaaaaataatataagatgaca 20680668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 24320602 - 24320566
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaat 37  Q
    ||||||| |||||||||||||||| ||||||||||||    
T  24320602 atactccgcctttttgctgctaaaacctactgaaaat 24320566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 92904 - 92823
Alignment:
Q  5 tcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaactac 86  Q
    ||||| ||||||||||||||||||||| ||||||||||||||| ||||||| ||||| ||||||| || ||| |||||||||    
T  92904 tcctcttttttgctgctaaaccctactaaaaataactgaaaaacatgctaagaataacgtaagataacttgtcatcaactac 92823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 7e-19; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 17350995 - 17351075
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    ||||||||| |||||| ||||||| |||||||||||||||||||||||||| ||| ||||| |||||||||| ||| ||||    
T  17350995 atactcctcatttttgttgctaaaacctactgaaaataactgaaaaatatgttaagaataacgtaagatgacttgtcatca 17351075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 18758318 - 18758386
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagat 69  Q
    |||||||||||||||||| ||||| |||||||||||||| | ||||| ||||||||||||| |||||||    
T  18758318 atactcctcctttttgctactaaaacctactgaaaataattaaaaaacatgctaaaaataacgtaagat 18758386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 17891748 - 17891828
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||||||  |||||||| |||| |||||||||||| ||||||||| ||| ||| ||||| |||||||||||||| ||||    
T  17891748 atactcctctgttttgctggtaaaacctactgaaaatgactgaaaaacatgttaagaataacgtaagatgacatgtcatca 17891828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 24086386 - 24086315
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgac 72  Q
    |||||||||||||||||||||||| |||||| |||  |||||||||| ||||||| ||||| ||||| ||||    
T  24086386 atactcctcctttttgctgctaaatcctactaaaataaactgaaaaacatgctaagaataacgtaagttgac 24086315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 27907602 - 27907531
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgac 72  Q
    ||||| |||||||||| ||||||| | |||||||||| ||||||||| ||||||| ||||||||||| ||||    
T  27907602 atacttctcctttttgttgctaaaacttactgaaaatgactgaaaaacatgctaagaataatgtaaggtgac 27907531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 23861134 - 23861184
Alignment:
Q  33 aaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaac 83  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||||||||||    
T  23861134 aaaatgactgaaatatatgctaaaaataacgtaagatgacatgtgatcaac 23861184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 28918205 - 28918275
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatga 71  Q
    ||||||||||||||||  |||||| |||||||||||| ||||||||| ||||||| ||||| |||| ||||    
T  28918205 atactcctcctttttgtagctaaaacctactgaaaatgactgaaaaacatgctaagaataacgtaaaatga 28918275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 21905743 - 21905824
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaa 82  Q
    ||||||||||||||| |||||||| | ||| |||||| ||||||||| ||||||| |||||  ||||||||| ||| |||||    
T  21905743 atactcctcctttttcctgctaaaacatacagaaaatgactgaaaaacatgctaagaataacataagatgacctgtcatcaa 21905824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 16157139 - 16157083
Alignment:
Q  26 cctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaa 82  Q
    |||||||||||| ||||||||| ||||||| |||||||||||||||| ||| |||||    
T  16157139 cctactgaaaatgactgaaaaacatgctaagaataatgtaagatgacctgtcatcaa 16157083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 26313195 - 26313275
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||| | ||||||||||||||| |||||||||| | | | ||||| ||||||| |||||||||||||||| ||| ||||    
T  26313195 atactcattctttttgctgctaaaacctactgaaattgattaaaaaacatgctaagaataatgtaagatgacttgtcatca 26313275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 18120625 - 18120550
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgt 76  Q
    |||||||||| |||||||||||   |||||| |||  |||||||||| ||||||| ||||| ||||||||||||||    
T  18120625 atactcctccattttgctgctatttcctactaaaataaactgaaaaacatgctaagaataacgtaagatgacatgt 18120550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 29892232 - 29892282
Alignment:
Q  26 cctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgt 76  Q
    |||| ||||||||||||||||||||| ||| ||||| ||||||||||||||    
T  29892232 cctattgaaaataactgaaaaatatgttaagaataacgtaagatgacatgt 29892282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 35680180 - 35680111
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatg 70  Q
    |||||||||  |||||||| |||| |||||||||||| ||| ||||| ||||||| ||||| ||||||||    
T  35680180 atactcctctgttttgctggtaaaacctactgaaaatgacttaaaaacatgctaagaataacgtaagatg 35680111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 25196628 - 25196708
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    ||||| ||| |||||||||||||| |||||| |||  |||||||||| ||| ||| |||||  ||||||||||||| ||||    
T  25196628 atacttctcttttttgctgctaaatcctactaaaataaactgaaaaacatgttaagaataacataagatgacatgtcatca 25196708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 26651692 - 26651636
Alignment:
Q  26 cctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaa 82  Q
    |||||||||||| ||| ||||| ||| |||||||||||||||||||| ||| |||||    
T  26651692 cctactgaaaatgactcaaaaacatgttaaaaataatgtaagatgacttgtaatcaa 26651636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 25532253 - 25532324
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgac 72  Q
    ||||||||||||||||||||||   |||||| |||  |||||||||| ||||||| ||||| |||| |||||    
T  25532253 atactcctcctttttgctgctatttcctactaaaataaactgaaaaacatgctaagaataacgtaaaatgac 25532324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 27540341 - 27540274
Alignment:
Q  5 tcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgac 72  Q
    ||||| |||||  ||||||| |||||||||||| ||||||||||||||||| | ||| |||| |||||    
T  27540341 tcctcattttttatgctaaaacctactgaaaatgactgaaaaatatgctaagagtaacgtaatatgac 27540274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 20853098 - 20853179
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaa 82  Q
    ||||||||||||||||| |||||  | |||| |||  |||| ||||| ||||||| ||||| || ||||||||||| |||||    
T  20853098 atactcctcctttttgcagctaattcttactaaaataaacttaaaaacatgctaataataacgtgagatgacatgtcatcaa 20853179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 28925108 - 28925059
Alignment:
Q  180 cttgggttccaaccagcaaacccattggtgtttgatatcaagaatagtgt 229  Q
    ||||| |||||||||||||||||  |||||||||| |||||||| |||||    
T  28925108 cttggtttccaaccagcaaacccggtggtgtttgacatcaagaacagtgt 28925059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 34574530 - 34574611
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataact-gaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    ||||||||||| ||| ||  |||| ||||||||||||||||  ||||| ||||||| ||||| |||||||||| ||| ||||    
T  34574530 atactcctcctattttctattaaaacctactgaaaataactaaaaaaacatgctaagaataacgtaagatgacctgtaatca 34574611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 25537573 - 25537653
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    ||||||||||||||| ||| ||   |||||| |||  |||||||||| ||||||| ||||| |||||||||| ||| ||||    
T  25537573 atactcctcctttttactgttatttcctactaaaataaactgaaaaacatgctaagaataacgtaagatgacctgtcatca 25537653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 6470 - 6551
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaa 82  Q
    ||||||||| |||||| ||||||| |||| ||||||||||||||||| ||||||| ||||| ||||||| |||||| |||||    
T  6470 atactcctcatttttgttgctaaatcctattgaaaataactgaaaaacatgctaagaataacgtaagataacatgtcatcaa 6551  T

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Target: scaffold0451 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 5747 - 5818
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgac 72  Q
    |||||||||||||||||| ||||| |||||| ||||||||||||||| ||| ||||||||| | ||||||||    
T  5747 atactcctcctttttgcttctaaatcctactaaaaataactgaaaaacatgttaaaaataacgaaagatgac 5818  T

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Target: scaffold0451; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 10173 - 10092
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaa 82  Q
    |||||||||  |||||||  |||| |||||||||||| ||||||||  ||||||| ||||  |||||||||  |||||||||    
T  10173 atactcctctgttttgctagtaaaacctactgaaaatgactgaaaagcatgctaataatagcgtaagatgatctgtgatcaa 10092  T

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Target: scaffold0014 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 192141 - 192223
Alignment:
Q  3 actcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaacta 85  Q
    |||||| | ||||||||||||| |||| ||||||| ||||||||  ||||||||||||| |||||||||| ||| ||||||||    
T  192141 actccttcattttgctgctaaaacctattgaaaatgactgaaaaccatgctaaaaataacgtaagatgacctgtcatcaacta 192223  T

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Target: scaffold0016 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4841 - 4894
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgcta 54  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||| ||||||    
T  4841 atactcctcctttttgctgctaaaacctactgaaaatgactgaaaaacatgcta 4894  T

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Target: scaffold0019 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 182591 - 182511
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||||||||||||||||||||| |||||| |||  |||||||||| ||| ||  || ||| ||||||||||||| ||||    
T  182591 atactcctcctttttgctgctaaatcctactaaaataaactgaaaaacatgttatcaaaaatataagatgacatgtcatca 182511  T

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Target: scaffold0111 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 21458 - 21503
Alignment:
Q  2 tactcctcctttttgctgctaaaccctactgaaaataactgaaaaa 47  Q
    ||||| ||||||||||||||||| |||||||||| |||||||||||    
T  21458 tactcatcctttttgctgctaaaacctactgaaattaactgaaaaa 21503  T

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Target: scaffold0258 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 20332 - 20252
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    ||||||||||||||||||||||   |||||| || | || ||||||| ||||||| ||||| |||||||||| ||| ||||    
T  20332 atactcctcctttttgctgctatttcctactaaataaaattgaaaaacatgctaagaataacgtaagatgacttgtcatca 20252  T

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Target: scaffold0043 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 88496 - 88436
Alignment:
Q  21 taaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||| |||||||||||| | ||||||| ||||||| ||||| |||||||||||||| ||||    
T  88496 taaaacctactgaaaatgattgaaaaacatgctaagaataacgtaagatgacatgtcatca 88436  T

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Target: scaffold0024 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 41356 - 41416
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataa 61  Q
    |||||||||  |||||||| |||| |||||| ||||||||||||||| ||||||| |||||    
T  41356 atactcctctgttttgctggtaaaacctactaaaaataactgaaaaacatgctaagaataa 41416  T

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Target: scaffold0085 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 76
Target Start/End: Original strand, 24043 - 24082
Alignment:
Q  37 taactgaaaaatatgctaaaaataatgtaagatgacatgt 76  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  24043 taacttaaaaacatgctaaaaataatgtaagatgacatgt 24082  T

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Target: scaffold0034 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 75987 - 75941
Alignment:
Q  180 cttgggttccaaccagcaaacccattggtgtttgatatcaagaatag 226  Q
    ||||| |||||||||||||||||  |||||||||| |||||||||||    
T  75987 cttggtttccaaccagcaaacccggtggtgtttgacatcaagaatag 75941  T

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Target: scaffold0005 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 243910 - 243829
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatcaac 83  Q
    |||||||||  |||||||  |||| |||||| ||||| ||| ||||||||||||| ||||| ||||||||| |||| ||||||    
T  243910 atactcctctgttttgctagtaaaacctacttaaaatgact-aaaaatatgctaagaataacgtaagatgatatgtcatcaac 243829  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 369298 - 369261
Alignment:
Q  33 aaaataactgaaaaatatgctaaaaataatgtaagatg 70  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  369298 aaaatgactgaaaaacatgctaaaaataatgtaagatg 369261  T

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Target: scaffold0637 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 7423 - 7483
Alignment:
Q  21 taaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||| |||||| ||||| ||||||||| ||||| | ||||||||||| |||||||| ||||    
T  7423 taaaacctactaaaaatgactgaaaaacatgcttacaataatgtaagttgacatgtcatca 7483  T

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Target: scaffold0056 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 23053 - 23133
Alignment:
Q  1 atactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtgatca 81  Q
    |||||||||||||||| ||||||  |||| | ||||||||||||| | ||||||| ||||   ||||||||| ||| ||||    
T  23053 atactcctcctttttggtgctaacacctaattaaaataactgaaatacatgctaagaatagcataagatgacctgtcatca 23133  T

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