View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17568_low_4 (Length: 372)

Name: NF17568_low_4
Description: NF17568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17568_low_4
NF17568_low_4
[»] chr7 (34 HSPs)
chr7 (156-365)||(21669979-21670197)
chr7 (172-365)||(43933573-43933775)
chr7 (156-365)||(16376558-16376776)
chr7 (157-365)||(24924077-24924294)
chr7 (156-365)||(13786168-13786386)
chr7 (156-365)||(40968889-40969107)
chr7 (217-365)||(21656626-21656773)
chr7 (156-365)||(21804585-21804803)
chr7 (156-365)||(27138541-27138759)
chr7 (156-365)||(38163352-38163570)
chr7 (156-365)||(42242167-42242385)
chr7 (166-365)||(15109688-15109896)
chr7 (156-365)||(21341821-21342039)
chr7 (156-365)||(31373454-31373672)
chr7 (156-365)||(33916960-33917178)
chr7 (156-360)||(3840654-3840867)
chr7 (156-365)||(27903430-27903648)
chr7 (156-365)||(17178250-17178469)
chr7 (175-365)||(21753524-21753723)
chr7 (167-327)||(39030276-39030446)
chr7 (1-45)||(7894207-7894252)
chr7 (316-365)||(31096698-31096746)
chr7 (156-202)||(31097882-31097928)
chr7 (315-360)||(17178507-17178551)
chr7 (316-360)||(3840912-3840955)
chr7 (316-360)||(16376812-16376855)
chr7 (316-360)||(21341737-21341780)
chr7 (316-360)||(21656547-21656590)
chr7 (316-360)||(21669895-21669938)
chr7 (316-360)||(21804842-21804885)
chr7 (316-360)||(27138798-27138841)
chr7 (316-360)||(31373370-31373413)
chr7 (316-360)||(33917217-33917260)
chr7 (316-360)||(42242424-42242467)
[»] chr6 (29 HSPs)
chr6 (156-365)||(17202430-17202648)
chr6 (156-359)||(13533771-13533983)
chr6 (156-360)||(15044725-15044938)
chr6 (156-365)||(3592891-3593109)
chr6 (172-365)||(10584757-10584959)
chr6 (156-365)||(12597278-12597496)
chr6 (156-365)||(19997663-19997881)
chr6 (156-365)||(33645940-33646158)
chr6 (164-365)||(2005426-2005636)
chr6 (156-365)||(28099610-28099828)
chr6 (236-365)||(8539598-8539726)
chr6 (219-365)||(17594814-17594960)
chr6 (156-365)||(2266766-2266992)
chr6 (235-365)||(25448747-25448876)
chr6 (156-215)||(1405576-1405635)
chr6 (156-202)||(8539723-8539769)
chr6 (156-202)||(8657077-8657123)
chr6 (316-360)||(2266684-2266727)
chr6 (258-290)||(5134444-5134476)
chr6 (316-360)||(10584996-10585039)
chr6 (316-360)||(12597535-12597578)
chr6 (316-360)||(15044639-15044682)
chr6 (316-360)||(17202348-17202391)
chr6 (316-360)||(17594733-17594776)
chr6 (316-360)||(19997580-19997623)
chr6 (253-293)||(22730709-22730749)
chr6 (316-360)||(28099868-28099911)
chr6 (179-215)||(33035590-33035626)
chr6 (316-360)||(33645858-33645901)
[»] chr3 (44 HSPs)
chr3 (156-365)||(26948796-26949014)
chr3 (156-365)||(36076467-36076685)
chr3 (156-365)||(4584447-4584665)
chr3 (156-365)||(20671247-20671465)
chr3 (157-365)||(31488409-31488626)
chr3 (163-365)||(39146438-39146649)
chr3 (169-365)||(45557910-45558115)
chr3 (156-365)||(12264198-12264416)
chr3 (156-365)||(38653940-38654158)
chr3 (156-365)||(43363624-43363842)
chr3 (156-365)||(49672560-49672778)
chr3 (156-365)||(1941733-1941951)
chr3 (156-365)||(3898420-3898638)
chr3 (156-365)||(21098302-21098520)
chr3 (156-365)||(34121353-34121571)
chr3 (156-365)||(49506362-49506580)
chr3 (219-365)||(24119205-24119350)
chr3 (219-365)||(49478206-49478351)
chr3 (156-365)||(54073025-54073246)
chr3 (156-365)||(55041596-55041820)
chr3 (156-314)||(40014666-40014834)
chr3 (291-365)||(26052236-26052309)
chr3 (175-299)||(26051334-26051469)
chr3 (156-215)||(6460181-6460240)
chr3 (156-202)||(37099714-37099760)
chr3 (315-360)||(21098219-21098263)
chr3 (168-197)||(23210365-23210394)
chr3 (316-360)||(1941990-1942033)
chr3 (316-360)||(3898338-3898381)
chr3 (316-360)||(12264115-12264158)
chr3 (316-360)||(20671166-20671209)
chr3 (316-360)||(26052349-26052392)
chr3 (316-360)||(26948689-26948732)
chr3 (316-360)||(31488329-31488372)
chr3 (316-360)||(34121271-34121314)
chr3 (316-360)||(38654198-38654241)
chr3 (316-360)||(43363881-43363924)
chr3 (258-290)||(43566806-43566838)
chr3 (316-360)||(45558153-45558196)
chr3 (316-360)||(49478124-49478167)
chr3 (316-360)||(49672478-49672521)
chr3 (258-294)||(50724420-50724456)
chr3 (258-294)||(50788392-50788428)
chr3 (316-360)||(55041858-55041901)
[»] chr4 (41 HSPs)
chr4 (156-359)||(16904965-16905177)
chr4 (156-365)||(46256032-46256250)
chr4 (156-365)||(33139484-33139702)
chr4 (156-365)||(37590817-37591035)
chr4 (156-365)||(44376092-44376310)
chr4 (156-365)||(12090472-12090691)
chr4 (156-365)||(52434622-52434840)
chr4 (162-365)||(16917907-16918119)
chr4 (156-359)||(35760585-35760797)
chr4 (156-365)||(30824935-30825153)
chr4 (217-365)||(45977074-45977221)
chr4 (156-365)||(53143275-53143493)
chr4 (157-365)||(41387124-41387341)
chr4 (156-365)||(37651664-37651882)
chr4 (217-365)||(45782513-45782660)
chr4 (217-365)||(48118615-48118762)
chr4 (162-365)||(39058376-39058588)
chr4 (217-365)||(31966053-31966200)
chr4 (166-365)||(31628510-31628718)
chr4 (217-365)||(52098274-52098422)
chr4 (156-365)||(47142813-47143031)
chr4 (217-360)||(50229790-50229933)
chr4 (217-365)||(54624955-54625095)
chr4 (243-290)||(34684606-34684653)
chr4 (258-295)||(6481589-6481626)
chr4 (316-360)||(12090730-12090773)
chr4 (316-360)||(16905218-16905261)
chr4 (316-360)||(16918158-16918201)
chr4 (258-294)||(23935032-23935068)
chr4 (316-360)||(30825192-30825235)
chr4 (316-360)||(31966239-31966282)
chr4 (258-294)||(37997852-37997888)
chr4 (316-360)||(39058622-39058665)
chr4 (316-360)||(45977264-45977307)
chr4 (316-360)||(47143070-47143113)
chr4 (316-360)||(48118802-48118845)
chr4 (183-215)||(50229712-50229744)
chr4 (316-360)||(52098460-52098503)
chr4 (316-360)||(52434540-52434583)
chr4 (316-360)||(53143534-53143577)
chr4 (316-360)||(54624879-54624922)
[»] chr8 (50 HSPs)
chr8 (156-365)||(11725188-11725406)
chr8 (156-365)||(18841902-18842120)
chr8 (156-359)||(28582859-28583071)
chr8 (167-365)||(39257441-39257648)
chr8 (166-365)||(40026798-40027006)
chr8 (156-365)||(15961130-15961348)
chr8 (156-365)||(18997698-18997916)
chr8 (156-365)||(30473897-30474115)
chr8 (174-365)||(28274245-28274445)
chr8 (163-365)||(24408874-24409085)
chr8 (163-365)||(44832206-44832417)
chr8 (156-365)||(6299033-6299251)
chr8 (156-365)||(10477935-10478153)
chr8 (156-365)||(18175379-18175597)
chr8 (156-365)||(18568863-18569081)
chr8 (217-365)||(19240661-19240808)
chr8 (217-365)||(19313845-19313992)
chr8 (217-365)||(19412829-19412977)
chr8 (156-365)||(32110874-32111092)
chr8 (166-355)||(35122345-35122543)
chr8 (156-365)||(995828-996046)
chr8 (217-365)||(24004811-24004958)
chr8 (156-365)||(44836907-44837125)
chr8 (156-365)||(11142459-11142683)
chr8 (156-328)||(39997725-39997907)
chr8 (175-360)||(18210656-18210850)
chr8 (244-365)||(23353688-23353808)
chr8 (275-365)||(25875441-25875530)
chr8 (302-365)||(18481929-18481991)
chr8 (156-201)||(23353635-23353680)
chr8 (316-365)||(39997660-39997708)
chr8 (243-292)||(33155319-33155368)
chr8 (316-360)||(6299290-6299333)
chr8 (316-360)||(10477853-10477896)
chr8 (316-360)||(11142381-11142424)
chr8 (316-360)||(11725106-11725149)
chr8 (258-290)||(13702362-13702394)
chr8 (316-360)||(18175297-18175340)
chr8 (316-360)||(18997616-18997659)
chr8 (316-360)||(19240580-19240623)
chr8 (316-360)||(19313764-19313807)
chr8 (316-360)||(19412752-19412795)
chr8 (316-360)||(23353846-23353889)
chr8 (316-360)||(24408795-24408838)
chr8 (316-360)||(30474153-30474196)
chr8 (316-360)||(32111131-32111174)
chr8 (316-360)||(35122585-35122628)
chr8 (316-360)||(39997580-39997623)
chr8 (316-360)||(44832457-44832500)
chr8 (316-360)||(44836824-44836867)
[»] chr2 (29 HSPs)
chr2 (156-365)||(19596376-19596594)
chr2 (156-365)||(8700259-8700477)
chr2 (156-365)||(31424007-31424225)
chr2 (156-365)||(26231272-26231490)
chr2 (156-365)||(41664508-41664726)
chr2 (173-365)||(36279484-36279685)
chr2 (156-365)||(6120550-6120768)
chr2 (156-365)||(18351549-18351767)
chr2 (156-365)||(41663235-41663453)
chr2 (217-360)||(34007793-34007935)
chr2 (165-365)||(42055197-42055404)
chr2 (217-365)||(999315-999462)
chr2 (156-365)||(44902080-44902297)
chr2 (156-360)||(20544828-20545041)
chr2 (163-365)||(42441958-42442173)
chr2 (217-365)||(16214822-16214969)
chr2 (172-299)||(692231-692368)
chr2 (156-286)||(27944809-27944949)
chr2 (316-360)||(19596634-19596677)
chr2 (156-202)||(31572451-31572497)
chr2 (258-290)||(3179377-3179409)
chr2 (316-360)||(6120467-6120510)
chr2 (316-360)||(16214741-16214784)
chr2 (316-360)||(18351467-18351510)
chr2 (316-360)||(26231527-26231570)
chr2 (316-360)||(31423924-31423967)
chr2 (316-360)||(34007980-34008023)
chr2 (316-360)||(41663152-41663195)
chr2 (316-360)||(42441876-42441919)
[»] chr5 (41 HSPs)
chr5 (156-365)||(1395987-1396205)
chr5 (156-365)||(20655062-20655280)
chr5 (166-365)||(5479194-5479402)
chr5 (156-365)||(20874686-20874904)
chr5 (217-365)||(27647928-27648075)
chr5 (156-365)||(34107351-34107569)
chr5 (156-365)||(34110650-34110868)
chr5 (156-365)||(38246878-38247096)
chr5 (156-365)||(33375760-33375980)
chr5 (156-365)||(10729455-10729673)
chr5 (156-365)||(16526319-16526537)
chr5 (217-365)||(29275622-29275769)
chr5 (162-365)||(24223183-24223395)
chr5 (156-365)||(2398955-2399171)
chr5 (217-365)||(1394570-1394717)
chr5 (217-365)||(6940587-6940734)
chr5 (156-365)||(25099249-25099467)
chr5 (156-365)||(25158339-25158557)
chr5 (156-365)||(17373174-17373395)
chr5 (217-365)||(33570391-33570538)
chr5 (217-365)||(14141191-14141338)
chr5 (217-360)||(17913744-17913886)
chr5 (156-283)||(40177120-40177257)
chr5 (258-295)||(18101954-18101991)
chr5 (316-360)||(1395907-1395950)
chr5 (316-360)||(2399210-2399253)
chr5 (258-290)||(4316976-4317008)
chr5 (316-360)||(5479115-5479158)
chr5 (316-360)||(6940768-6940811)
chr5 (316-360)||(10729712-10729755)
chr5 (316-360)||(14141377-14141420)
chr5 (316-360)||(16526577-16526620)
chr5 (316-360)||(17373434-17373477)
chr5 (316-360)||(20874604-20874647)
chr5 (316-360)||(24223434-24223477)
chr5 (316-360)||(27647845-27647888)
chr5 (316-360)||(33570578-33570621)
chr5 (316-360)||(34107608-34107651)
chr5 (316-360)||(34110566-34110609)
chr5 (316-360)||(38247135-38247178)
chr5 (316-360)||(40177033-40177076)
[»] chr1 (38 HSPs)
chr1 (163-365)||(38444629-38444840)
chr1 (156-365)||(4266379-4266597)
chr1 (156-365)||(23482720-23482938)
chr1 (156-365)||(34888699-34888917)
chr1 (156-365)||(38913760-38913978)
chr1 (156-365)||(9216029-9216247)
chr1 (156-365)||(35614065-35614283)
chr1 (156-360)||(52687127-52687339)
chr1 (156-365)||(18855246-18855463)
chr1 (167-365)||(50151058-50151265)
chr1 (156-365)||(2951379-2951597)
chr1 (217-365)||(7333942-7334089)
chr1 (217-365)||(39727978-39728125)
chr1 (156-365)||(18706522-18706739)
chr1 (156-346)||(1231813-1232012)
chr1 (224-365)||(19768462-19768602)
chr1 (217-360)||(35614819-35614960)
chr1 (217-355)||(19764634-19764771)
chr1 (235-365)||(2590333-2590461)
chr1 (156-287)||(31018213-31018354)
chr1 (156-287)||(50326076-50326217)
chr1 (156-215)||(29942175-29942234)
chr1 (258-294)||(50575954-50575990)
chr1 (176-215)||(5061380-5061419)
chr1 (156-202)||(29387900-29387946)
chr1 (156-193)||(52957055-52957092)
chr1 (316-360)||(1231725-1231768)
chr1 (316-360)||(2951636-2951679)
chr1 (316-360)||(4266297-4266340)
chr1 (162-202)||(14009851-14009891)
chr1 (316-360)||(18706773-18706816)
chr1 (316-360)||(19764814-19764857)
chr1 (316-360)||(19768382-19768425)
chr1 (316-360)||(23482972-23483015)
chr1 (258-294)||(24168585-24168621)
chr1 (316-360)||(35614734-35614777)
chr1 (316-360)||(38914017-38914060)
chr1 (316-360)||(52036310-52036353)
[»] scaffold0173 (1 HSPs)
scaffold0173 (156-365)||(19345-19563)
[»] scaffold0031 (1 HSPs)
scaffold0031 (156-365)||(46272-46490)
[»] scaffold0022 (2 HSPs)
scaffold0022 (156-365)||(149063-149281)
scaffold0022 (316-360)||(149318-149361)
[»] scaffold0515 (1 HSPs)
scaffold0515 (156-304)||(6074-6232)
[»] scaffold0306 (1 HSPs)
scaffold0306 (156-304)||(6084-6242)
[»] scaffold0836 (1 HSPs)
scaffold0836 (156-285)||(5291-5430)
[»] scaffold0896 (1 HSPs)
scaffold0896 (156-202)||(1087-1133)


Alignment Details
Target: chr7 (Bit Score: 137; Significance: 2e-71; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 21670197 - 21669979
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||           ||||| |||||||| |||||||||| |||    
T  21670197 cccgtgctgccgcacaggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaatatgtggtcccaaatatatg 21670098  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  21670097 cagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 21669999  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||||||||||| ||||    
T  21669998 tgtcaatgttatattattgg 21669979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 172 - 365
Target Start/End: Original strand, 43933573 - 43933775
Alignment:
Q  172 ggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcg 261  Q
    ||||||||||||||||||||||||||||||| ||||||||||||           ||||| |||||||| |||||||||| |||||||||||| ||||||    
T  43933573 ggtcatatacattgtagatgtagtagacaaaaaaaaatctcaatgcatataaaagagaataaaatatgtggtcccaaatatatgcagatgttggaattcg 43933672  T
Q  262 aacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattatatgtcaatgttatattc 361  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||     
T  43933673 aacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattatatgtcaatgttatatta 43933771  T
Q  362 ttgg 365  Q
    ||||    
T  43933772 ttgg 43933775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 16376558 - 16376776
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||| | ||||||||||           ||||| ||| |||| |||||||||| |||    
T  16376558 cccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtggtcccaaatatatg 16376657  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||    
T  16376658 cagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttca-ttcttttgttaaaattata 16376756  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||||||||||| ||||    
T  16376757 tgtcaatgttatattattgg 16376776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 157 - 365
Target Start/End: Complemental strand, 24924294 - 24924077
Alignment:
Q  157 ccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatgc 246  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||     
T  24924294 ccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgt 24924195  T
Q  247 agatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattatat 346  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||    
T  24924194 agatgttggaatttgaacctcagacaccacacttattcaccttaaaaatattaaattttatcaatcgtgtgttacttca-ttcttttgttaaaattatat 24924096  T
Q  347 gtcaatgttatattcttgg 365  Q
    |||||||||||||| ||||    
T  24924095 gtcaatgttatattattgg 24924077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 13786386 - 13786168
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||| | ||||||||||           ||||| ||| |||| |||||||||| |||    
T  13786386 cccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtggtcccaaatatatg 13786287  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||| ||||||||||||||||    
T  13786286 cagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgcgtcttacttcattt-ttttgttaaaattata 13786188  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||||||||||| ||||    
T  13786187 tgtcaatgttatattattgg 13786168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 40969107 - 40968889
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||| | | ||||||||||           ||||| ||| |||| |||||||||| |||    
T  40969107 cccgtgctgccgcacgggtcatatacattgtagatgtagtagacacaaacaaatctcaatgcatatcaaagagaataaaacatgtggtcccaaatatatg 40969008  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||    
T  40969007 cagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttca-ttcttttgttaaaattata 40968909  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||||||||||| ||||    
T  40968908 tgtcaatgttatattattgg 40968889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 217 - 365
Target Start/End: Complemental strand, 21656773 - 21656626
Alignment:
Q  217 agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgttt 316  Q
    ||||| |||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  21656773 agaataaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgt 21656674  T
Q  317 gttacttcatttcttttgttaaaattatatgtcaatgttatattcttgg 365  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  21656673 gttacttca-ttcttttgttaaaattatatgtcaatgttatattattgg 21656626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 21804585 - 21804803
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  21804585 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 21804684  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  21804685 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 21804783  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  21804784 tgtcaatattatattattgg 21804803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 27138541 - 27138759
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||||||||||||||||| ||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  27138541 cccgtgctgccgcacaggtcatatacattctagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 27138640  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  27138641 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 27138739  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  27138740 tgtcaatattatattattgg 27138759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 38163352 - 38163570
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  38163352 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 38163451  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  38163452 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 38163550  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  38163551 tgtcaatattatattattgg 38163570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 42242167 - 42242385
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  42242167 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 42242266  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  42242267 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 42242365  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  42242366 tgtcaatattatattattgg 42242385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 166 - 365
Target Start/End: Original strand, 15109688 - 15109896
Alignment:
Q  166 cgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatgcagatgttga 255  Q
    ||||| || |||||||||||||||||||||||||||| | ||||||||||           |||||||||||||| |||||||||| ||||||||||||     
T  15109688 cgcaccggacatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttgg 15109787  T
Q  256 aattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattatatgtcaatgtt 355  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||    
T  15109788 aattcgaacctcagacaccacacttattcatcttaaaagtattaatttttatcaattgtgtgttacttca-ttcttttgttaaaattatatgtcaatgtt 15109886  T
Q  356 atattcttgg 365  Q
    ||||| ||||    
T  15109887 atattattgg 15109896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 21342039 - 21341821
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| || |||||||| | ||||||||||           |||||||||||||||||| |||||| |||    
T  21342039 cccgtgctgccgcacgggtcatatacattgtagatataatagacaaaaataaatctcaatgcatatcaaagagaatgaaatatgtagtctcaaatatatg 21341940  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  21341939 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 21341841  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  21341840 tgtcaatattatattattgg 21341821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 31373672 - 31373454
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| || |||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  31373672 cccgtgctgccgcacgggtcatatacattgtagatataatagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 31373573  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| | |||||||| |||||||||||||||||||    
T  31373572 cagatgttgaaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtattacttca-ttcttttgttaaaattata 31373474  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  31373473 tgtcaatattatattattgg 31373454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 33916960 - 33917178
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  33916960 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 33917059  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||    
T  33917060 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttatttca-ttcttttgttaaaattata 33917158  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  33917159 tgtcaatattatattattgg 33917178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 156 - 360
Target Start/End: Original strand, 3840654 - 3840867
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| |||||||||  |||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  3840654 cccgtgctgccgcacgagtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 3840753  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  3840754 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 3840852  T
Q  346 tgtcaatgttatatt 360  Q
    ||||||| |||||||    
T  3840853 tgtcaatattatatt 3840867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 27903430 - 27903648
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||| | ||||||||||           ||||| ||| |||| |||||||||| |||    
T  27903430 cccgtgctgccgcacgggtcatatatattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtggtcccaaatatatg 27903529  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| |||||||||||||||| ||    
T  27903530 cagatgttggaattcgaacctcatacaccacacttattcaccttaaaaatattaatttttaccaatcgtgtcttacttca-ttcttttgttaaaattcta 27903628  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||||||||||| ||||    
T  27903629 tgtcaatgttatattattgg 27903648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 17178250 - 17178469
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||  ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  17178250 cccgtgctgccgcatgggtcatatacattgtagatatagtagacaaaaacaaatctcaattcatatcaaagagaatgaaatatgtggtcccaaatatatg 17178349  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcacc-ttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattat 344  Q
    ||||||||| ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||  |||||||||| ||||||||||||||||||    
T  17178350 cagatgttggaattcgaacctcagacaccacacttattcaccaaaaaaaatattaatttttatcaatcgggtgttacttca-ttcttttgttaaaattat 17178448  T
Q  345 atgtcaatgttatattcttgg 365  Q
    |||||||| ||||||| ||||    
T  17178449 atgtcaatattatattattgg 17178469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 175 - 365
Target Start/End: Original strand, 21753524 - 21753723
Alignment:
Q  175 catatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcgaac 264  Q
    |||||||||||||||||||||||||||| | ||||||||||           ||||| ||| |||| ||| |||||| ||||||||||| ||||||||||    
T  21753524 catatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtggtctcaaatatatgcagatgttaaaattcgaac 21753623  T
Q  265 ctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattatatgtcaatgttatattcttg 364  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| |||    
T  21753624 cttagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttca-ttcttttgttaaaattatatgtcaatgttatattattg 21753722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 167 - 327
Target Start/End: Original strand, 39030276 - 39030446
Alignment:
Q  167 gcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatgcagatgttgaa 256  Q
    |||| ||||||||| ||||||||||||||||||||| | |||| |||||           ||||| ||| |||| |||||||||| |||||||||||| |    
T  39030276 gcacgggtcatatatattgtagatgtagtagacaaaaacaaatttcaatgcatatcaaagagaataaaacatgtggtcccaaatatatgcagatgttgga 39030375  T
Q  257 attcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatt 327  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  39030376 attcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcatt 39030446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 7894252 - 7894207
Alignment:
Q  1 gcgggcattttggaggaga-cgggagtaagagtagggtttgttttc 45  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  7894252 gcgggcattttggaggagaacgggagtaagagtagggtttgttttc 7894207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 316 - 365
Target Start/End: Complemental strand, 31096746 - 31096698
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatattcttgg 365  Q
    |||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  31096746 tgttacttcatt-cttttgttaaaattatatgtcaatattatattattgg 31096698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 31097928 - 31097882
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaa 202  Q
    ||||| ||||||||| ||||||||||||||||  |||||||||||||    
T  31097928 cccgtgctgccgcacgggtcatatacattgtaagtgtagtagacaaa 31097882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 360
Target Start/End: Original strand, 17178507 - 17178551
Alignment:
Q  315 ttgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    ||||||||||||| ||||||| |||||||||||| |||||||||||    
T  17178507 ttgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 17178551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 3840912 - 3840955
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  3840912 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 3840955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 16376812 - 16376855
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    ||||||||||||  |||||| ||||||||||||||||||||||||    
T  16376812 tgttacttcatta-ttttgtaaaaattatatgtcaatgttatatt 16376855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 21341780 - 21341737
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  21341780 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 21341737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 21656590 - 21656547
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  21656590 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 21656547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 21669938 - 21669895
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  21669938 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 21669895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 21804842 - 21804885
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  21804842 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 21804885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 27138798 - 27138841
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  27138798 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 27138841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 31373413 - 31373370
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  31373413 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 31373370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 33917217 - 33917260
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  33917217 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 33917260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 42242424 - 42242467
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  42242424 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 42242467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 133; Significance: 4e-69; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 17202648 - 17202430
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||| | ||||| ||||           |||||||||||||| |||||||||| |||    
T  17202648 cccgtgctgccgcacaagtcatatacattgtagatgtagtagacaaatacaaatcacaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 17202549  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  17202548 cagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 17202450  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||||||||||| ||||    
T  17202449 tgtcaatgttatattattgg 17202430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 156 - 359
Target Start/End: Complemental strand, 13533983 - 13533771
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||||||||||| ||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  13533983 cccgtgctgccgcacgggtcatatacattgtagatgtagtagataaaaacaaatctcaatgtatatcaaagagaatgaaatatgtggtcccaaatatatg 13533884  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  13533883 cagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 13533785  T
Q  346 tgtcaatgttatat 359  Q
    ||||||||||||||    
T  13533784 tgtcaatgttatat 13533771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 156 - 360
Target Start/End: Complemental strand, 15044938 - 15044725
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| | |||| |||||           ||||| |||||||| |||||||||| |||    
T  15044938 cccgtgctgccgcacaggtcatatacattgtagatgtagtagacaaaaataaatttcaatgcatatcaaagagaataaaatatgtggtcccaaatatatg 15044839  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||    
T  15044838 cagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgttttacttca-ttcttttgttaaaattata 15044740  T
Q  346 tgtcaatgttatatt 360  Q
    |||||||||||||||    
T  15044739 tgtcaatgttatatt 15044725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 3593109 - 3592891
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||| | ||||||||||           ||||||||||||||  ||||||||| ||     
T  3593109 cccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatccaagagaatgaaatatgtgatcccaaatatatt 3593010  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||    
T  3593009 cagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatgaatcgtgtgttacttca-ttcttttgttaaaattata 3592911  T
Q  346 tgtcaatgttatattcttgg 365  Q
    | ||||||||||||| ||||    
T  3592910 tctcaatgttatattattgg 3592891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 172 - 365
Target Start/End: Original strand, 10584757 - 10584959
Alignment:
Q  172 ggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcg 261  Q
    ||||||||||||||||||||||||||||||| | |||||| |||           |||||||||||||| |||||||||| |||||||||||| ||||||    
T  10584757 ggtcatatacattgtagatgtagtagacaaaaacaaatcttaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcg 10584856  T
Q  262 aacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattatatgtcaatgttatattc 361  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||     
T  10584857 aacctcagacactacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattatatgtcaatgttatatta 10584955  T
Q  362 ttgg 365  Q
    ||||    
T  10584956 ttgg 10584959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 12597278 - 12597496
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  12597278 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 12597377  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  12597378 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 12597476  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  12597477 tgtcaatattatattattgg 12597496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 19997881 - 19997663
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  19997881 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 19997782  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  19997781 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 19997683  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  19997682 tgtcaatattatattattgg 19997663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 33646158 - 33645940
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| || ||||||| |||    
T  33646158 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggttccaaatatatg 33646059  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  33646058 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 33645960  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  33645959 tgtcaatattatattattgg 33645940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 164 - 365
Target Start/End: Complemental strand, 2005636 - 2005426
Alignment:
Q  164 gccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatgcagatgtt 253  Q
    ||||||| |||||||||||||||||||| |||||||||| | ||||||||||           ||||| ||| |||| |||  ||||| |||||||||||    
T  2005636 gccgcacgggtcatatacattgtagatgcagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtggtcttaaatatatgcagatgtt 2005537  T
Q  254 gaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattatatgtcaatg 353  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||    
T  2005536 ggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttca-ttcttttgttaaaattatatgtcaatg 2005438  T
Q  354 ttatattcttgg 365  Q
    ||||||| ||||    
T  2005437 ttatattattgg 2005426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 28099610 - 28099828
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| || |||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  28099610 cccgtgctgccgcacgggtcatatacattgtagatataatagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 28099709  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    | ||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  28099710 ctgatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 28099808  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  28099809 tgtcaatattatattattgg 28099828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 236 - 365
Target Start/End: Complemental strand, 8539726 - 8539598
Alignment:
Q  236 caaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgt 335  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  8539726 caaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgt 8539628  T
Q  336 taaaattatatgtcaatgttatattcttgg 365  Q
    ||||||||||||||||||||||||| ||||    
T  8539627 taaaattatatgtcaatgttatattattgg 8539598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 219 - 365
Target Start/End: Complemental strand, 17594960 - 17594814
Alignment:
Q  219 aatgaaatatgtagtcccaaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatatt-aatttttatcaatcgtttg 317  Q
    |||||||||||| |||||||||| ||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  17594960 aatgaaatatgtggtcccaaatatatggagatgttgaaattcaaacttcagacaccacacttattcaccttaaaaatattaaatttttatcaatcgtatg 17594861  T
Q  318 ttacttcatttcttttgttaaaattatatgtcaatgttatattcttgg 365  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||    
T  17594860 ttacttca-ttcttttgttaaaattatatgtcaatgttatattattgg 17594814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 2266992 - 2266766
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  2266992 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 2266893  T
Q  246 cagatgttgaaattcgaacctcagacaccaca--------cttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgtta 337  Q
    ||||||||| |||||||||||||||||||||         ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||    
T  2266892 cagatgttggaattcgaacctcagacaccacgacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgtta 2266794  T
Q  338 aaattatatgtcaatgttatattcttgg 365  Q
    ||||||||||||||| ||||||| ||||    
T  2266793 aaattatatgtcaatattatattattgg 2266766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 235 - 365
Target Start/End: Complemental strand, 25448876 - 25448747
Alignment:
Q  235 ccaaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttg 334  Q
    ||||||| ||| |||||||| |||||||| |||||||||||| ||||||||||  ||| ||||||||||||||||||||| ||||||||||||| |||||    
T  25448876 ccaaatatatgtagatgttggaattcgaaactcagacaccacgcttattcaccaaaaatatattaatttttatcaatcgtgtgttacttcattt-ttttg 25448778  T
Q  335 ttaaaattatatgtcaatgttatattcttgg 365  Q
    |||||||||||||||||| ||||||| ||||    
T  25448777 ttaaaattatatgtcaatattatattattgg 25448747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 1405576 - 1405635
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaat 215  Q
    ||||| ||||||||| ||||||||||||||||||||||||||| ||| | ||||||||||    
T  1405576 cccgtgctgccgcacgggtcatatacattgtagatgtagtagataaaaacaaatctcaat 1405635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 8539769 - 8539723
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaa 202  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  8539769 cccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaa 8539723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 8657077 - 8657123
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaa 202  Q
    ||||| ||||||||| ||||||||||||||||  |||||||||||||    
T  8657077 cccgtgctgccgcacgggtcatatacattgtaagtgtagtagacaaa 8657123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 2266727 - 2266684
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  2266727 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 2266684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 290
Target Start/End: Complemental strand, 5134476 - 5134444
Alignment:
Q  258 ttcgaacctcagacaccacacttattcacctta 290  Q
    ||||||||||||||||| |||||||||||||||    
T  5134476 ttcgaacctcagacaccccacttattcacctta 5134444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 10584996 - 10585039
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  10584996 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 10585039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 12597535 - 12597578
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  12597535 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 12597578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 15044682 - 15044639
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  15044682 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 15044639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 17202391 - 17202348
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  17202391 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 17202348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 17594776 - 17594733
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  17594776 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 17594733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 19997623 - 19997580
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  19997623 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 19997580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 293
Target Start/End: Complemental strand, 22730749 - 22730709
Alignment:
Q  253 tgaaattcgaacctcagacaccacacttattcaccttaaaa 293  Q
    |||| |||||||||| |||||| ||||||||||||||||||    
T  22730749 tgaagttcgaacctcggacaccccacttattcaccttaaaa 22730709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 28099868 - 28099911
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  28099868 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 28099911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 33035626 - 33035590
Alignment:
Q  179 tacattgtagatgtagtagacaaagaaaaatctcaat 215  Q
    |||||||||||||||||||||||| | ||||||||||    
T  33035626 tacattgtagatgtagtagacaaaaacaaatctcaat 33035590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 33645901 - 33645858
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  33645901 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 33645858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 133; Significance: 4e-69; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 26949014 - 26948796
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  26949014 cccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 26948915  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||    
T  26948914 cagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaacttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 26948816  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||||||||||| ||||    
T  26948815 tgtcaatgttatattattgg 26948796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 36076467 - 36076685
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  36076467 cccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatattaaagagaatgaaatatgtggtcccaaatatatg 36076566  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  36076567 cagatgttggaattcgaacttcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 36076665  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||||||||||| ||||    
T  36076666 tgtcaatgttatattattgg 36076685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 4584447 - 4584665
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  4584447 cccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 4584546  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||    
T  4584547 cagatgttggaatttgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttca-ttcttttgttaaaattata 4584645  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||||||||||| ||||    
T  4584646 tgtcaatgttatattattgg 4584665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 20671465 - 20671247
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||| |||  |||||||||||||||||||||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  20671465 cccgtgctgccacacgagtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 20671366  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  20671365 cagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 20671267  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||||||||||| ||||    
T  20671266 tgtcaatgttatattattgg 20671247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 157 - 365
Target Start/End: Complemental strand, 31488626 - 31488409
Alignment:
Q  157 ccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatgc 246  Q
    |||| ||||||||| ||| ||||||||||||||||||||||||||| | ||||||||||           |||||||||||||| |||||||||| ||||    
T  31488626 ccgtgctgccgcacgggttatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgttgtcccaaatatatgc 31488527  T
Q  247 agatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattatat 346  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  31488526 agatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttta-ttcttttgttaaaattatat 31488428  T
Q  347 gtcaatgttatattcttgg 365  Q
    |||||||||||||| ||||    
T  31488427 gtcaatgttatattattgg 31488409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 163 - 365
Target Start/End: Complemental strand, 39146649 - 39146438
Alignment:
Q  163 tgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatgcagatgt 252  Q
    |||||||| ||||||||||||||||||||||||||||||| | ||||||||||           ||||| |||||||| |||||||||| ||||||||||    
T  39146649 tgccgcacgggtcatatacattgtagatgtagtagacaaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcccaaatatatgcagatgt 39146550  T
Q  253 tgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattatatgtcaat 352  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||    
T  39146549 tggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttca-ttcttttgttaaaattatatgtcaat 39146451  T
Q  353 gttatattcttgg 365  Q
    |||||||| ||||    
T  39146450 gttatattattgg 39146438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 169 - 365
Target Start/End: Original strand, 45557910 - 45558115
Alignment:
Q  169 acaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatgcagatgttgaaat 258  Q
    |||||||||||| ||||||||||||||||||||| | ||||||||||           |||||||||||||| ||||||| || ||||||||||||||||    
T  45557910 acaggtcatatatattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaagtatatgcagatgttgaaat 45558009  T
Q  259 tcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattatatgtcaatgttata 358  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||| |||||    
T  45558010 tcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtattacttca-ttcttttgttaaaattatatgtcaatattata 45558108  T
Q  359 ttcttgg 365  Q
    || ||||    
T  45558109 ttattgg 45558115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 12264416 - 12264198
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  12264416 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 12264317  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  12264316 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 12264218  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  12264217 tgtcaatattatattattgg 12264198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 38653940 - 38654158
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  38653940 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 38654039  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  38654040 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 38654138  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  38654139 tgtcaatattatattattgg 38654158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 43363624 - 43363842
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  43363624 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 43363723  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  43363724 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 43363822  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  43363823 tgtcaatattatattattgg 43363842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 49672778 - 49672560
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  49672778 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 49672679  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  49672678 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 49672580  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  49672579 tgtcaatattatattattgg 49672560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 1941733 - 1941951
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  1941733 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 1941832  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||| ||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  1941833 cagatgttggaattcgaacctcagacatcacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 1941931  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  1941932 tgtcaatattatattattgg 1941951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 3898638 - 3898420
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  3898638 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatattaaagagaatgaaatatgtggtcccaaatatatg 3898539  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| |||| |||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  3898538 cagatgttggaatttgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 3898440  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  3898439 tgtcaatattatattattgg 3898420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 21098520 - 21098302
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| || |||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  21098520 cccgtgctgccgcacgggtcatatacattgtagatataatagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 21098421  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  21098420 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 21098322  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  21098321 tgtcaatattatattattgg 21098302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 34121571 - 34121353
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           ||||||||||| || |||||||||| |||    
T  34121571 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatacgtggtcccaaatatatg 34121472  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  34121471 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 34121373  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  34121372 tgtcaatattatattattgg 34121353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 49506362 - 49506580
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  49506362 cccgtactgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 49506461  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| || ||||||| |||||||||||||||||||    
T  49506462 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtggtacttca-ttcttttgttaaaattata 49506560  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  49506561 tgtcaatattatattattgg 49506580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 219 - 365
Target Start/End: Complemental strand, 24119350 - 24119205
Alignment:
Q  219 aatgaaatatgtagtcccaaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgt 318  Q
    |||||||||| | |||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  24119350 aatgaaatatatggtcccaaatatatgcagatgttggaattcaaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgt 24119251  T
Q  319 tacttcatttcttttgttaaaattatatgtcaatgttatattcttgg 365  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||    
T  24119250 tacttca-ttcttttgttaaaattatatgtcaatgttatattattgg 24119205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 219 - 365
Target Start/End: Complemental strand, 49478351 - 49478206
Alignment:
Q  219 aatgaaatatgtagtcccaaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgt 318  Q
    |||||||||||| |||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  49478351 aatgaaatatgtggtcccaaatatatgcaaatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgt 49478252  T
Q  319 tacttcatttcttttgttaaaattatatgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||    
T  49478251 tacttca-ttcttttattaaaattatatgtcaatgttatattattgg 49478206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 54073246 - 54073025
Alignment:
Q  156 cccgttctgccgcacaggtcatata---cattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatac 242  Q
    ||||| ||||||||| |||||||||   |||||||||| ||||||||||| | ||||||||||           |||||||||||||| ||||||||||     
T  54073246 cccgtgctgccgcacgggtcatatagtacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatat 54073147  T
Q  243 atgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaatt 342  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  54073146 atgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaatt 54073048  T
Q  343 atatgtcaatgttatattcttgg 365  Q
    |||||||||| ||||||| ||||    
T  54073047 atatgtcaatattatattattgg 54073025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 55041596 - 55041820
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| || |||||| ||||||||||||||||||||||||||||||| | ||||||||||           |||||||||||||| || ||||||| |||    
T  55041596 cccgtgctaccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggttccaaatatatg 55041695  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatatta------atttttatcaatcgtttgttacttcatttcttttgttaaa 339  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||      ||||||||||||||| ||||||||||  ||||||||||||    
T  55041696 cagatgtttgaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatttttatcaatcgtgtgttacttca-ctcttttgttaaa 55041794  T
Q  340 attatatgtcaatgttatattcttgg 365  Q
    ||||||||||||||||||||| ||||    
T  55041795 attatatgtcaatgttatattattgg 55041820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 156 - 314
Target Start/End: Original strand, 40014666 - 40014834
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| || || ||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  40014666 cccgtgctgccgcacgggtcatatacattgtagatataataaacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 40014765  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgt 314  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||    
T  40014766 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgt 40014834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 26052236 - 26052309
Alignment:
Q  291 aaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattatatgtcaatgttatattcttgg 365  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  26052236 aaaatattaatttttatcaatcgtgtgttacttcatt-cttttgttaaaattatatgtcaatgttatattattgg 26052309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 175 - 299
Target Start/End: Original strand, 26051334 - 26051469
Alignment:
Q  175 catatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtccc-aaatacatgcagatgttgaaattcgaa 263  Q
    |||||||||||||||||||||||||||| | ||||||||||           |||||||||||||| ||||| ||||| |||| || |||| ||||||||    
T  26051334 catatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtccccaaatatatgctgaggttggaattcgaa 26051433  T
Q  264 cctcagacaccacacttattcaccttaaaaatatta 299  Q
    ||||||||||||| ||||||||||||||||||||||    
T  26051434 cctcagacaccacgcttattcaccttaaaaatatta 26051469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 6460181 - 6460240
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaat 215  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||| | ||||||||||    
T  6460181 cccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaat 6460240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 37099760 - 37099714
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaa 202  Q
    ||||| ||||||||| ||||||||||||||||  |||||||||||||    
T  37099760 cccgtgctgccgcacgggtcatatacattgtaagtgtagtagacaaa 37099714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 360
Target Start/End: Complemental strand, 21098263 - 21098219
Alignment:
Q  315 ttgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    ||||||||||||| ||||||| |||||||||||| |||||||||||    
T  21098263 ttgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 21098219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 197
Target Start/End: Original strand, 23210365 - 23210394
Alignment:
Q  168 cacaggtcatatacattgtagatgtagtag 197  Q
    ||||||||||||||||||||||||||||||    
T  23210365 cacaggtcatatacattgtagatgtagtag 23210394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 1941990 - 1942033
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  1941990 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 1942033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 3898381 - 3898338
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  3898381 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 3898338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 12264158 - 12264115
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  12264158 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 12264115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 20671209 - 20671166
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  20671209 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 20671166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 26052349 - 26052392
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  26052349 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 26052392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 26948732 - 26948689
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  26948732 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 26948689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 31488372 - 31488329
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  31488372 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 31488329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 34121314 - 34121271
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  34121314 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 34121271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 38654198 - 38654241
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  38654198 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 38654241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 43363881 - 43363924
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  43363881 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 43363924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 290
Target Start/End: Complemental strand, 43566838 - 43566806
Alignment:
Q  258 ttcgaacctcagacaccacacttattcacctta 290  Q
    ||||||||||||||||| |||||||||||||||    
T  43566838 ttcgaacctcagacaccccacttattcacctta 43566806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 45558153 - 45558196
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    ||||||||||||| |||||| |||||||||||| |||||||||||    
T  45558153 tgttacttcattt-ttttgtaaaaattatatgttaatgttatatt 45558196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 49478167 - 49478124
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  49478167 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 49478124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 49672521 - 49672478
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  49672521 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 49672478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 294
Target Start/End: Original strand, 50724420 - 50724456
Alignment:
Q  258 ttcgaacctcagacaccacacttattcaccttaaaaa 294  Q
    |||||||||| |||||| |||||||||||||||||||    
T  50724420 ttcgaacctcggacaccccacttattcaccttaaaaa 50724456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 294
Target Start/End: Complemental strand, 50788428 - 50788392
Alignment:
Q  258 ttcgaacctcagacaccacacttattcaccttaaaaa 294  Q
    |||||||||| |||||| |||||||||||||||||||    
T  50788428 ttcgaacctcggacaccccacttattcaccttaaaaa 50788392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 55041858 - 55041901
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  55041858 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 55041901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 7e-68; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 156 - 359
Target Start/End: Original strand, 16904965 - 16905177
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  16904965 cccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 16905064  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||    
T  16905065 cagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaattgtgtgttacttca-ttcttttgttaaaattata 16905163  T
Q  346 tgtcaatgttatat 359  Q
    ||||||||||||||    
T  16905164 tgtcaatgttatat 16905177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 46256250 - 46256032
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||| | ||||||||||           ||||| |||||||| |||||||||| |||    
T  46256250 cccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaatatgtggtcccaaatatatg 46256151  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||    
T  46256150 cagatgttggaattggaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtatcttacttca-ttcttttgttaaaattata 46256052  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||||||||||| ||||    
T  46256051 tgtcaatgttatattattgg 46256032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 33139484 - 33139702
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           ||||| |||||||| |||||||||| |||    
T  33139484 cccgtgctgccgcacgggtcatatacattgtagatttagtagacaaaaacaaatctcaatgcatatcaaagagaattaaatatgttgtcccaaatatatg 33139583  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||    
T  33139584 cagatgttggaattcgaacctcagacaccacatttattcaccttaaaaatattaatttttatcaatcgtgtattacttca-ttcttttgttaaaattata 33139682  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||||||||||| ||||    
T  33139683 tgtcaatgttatattattgg 33139702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 37590817 - 37591035
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||   ||||||||||           ||||| ||| |||| |||||||||| |||    
T  37590817 cccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaatcaaatctcaatgcatatcaaagagaataaaacatgtggtcccaaatatatg 37590916  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||| |||||||||||||||||||    
T  37590917 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcatgtcttacttca-ttcttttgttaaaattata 37591015  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||||||||||| ||||    
T  37591016 tgtcaatgttatattattgg 37591035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 44376092 - 44376310
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||| | ||||||||||           ||||| ||| |||| ||| |||||| |||    
T  44376092 cccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtggtcacaaatatatg 44376191  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||    
T  44376192 cagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttca-ttcttttgttaaaattata 44376290  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||||||||||| ||||    
T  44376291 tgtcaatgttatattattgg 44376310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 12090472 - 12090691
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  12090472 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 12090571  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
     |||||||| ||||||||||||||||||||| |||||||| |  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12090572 tagatgttggaattcgaacctcagacaccacgcttattcaaccaaaaaatattaatttttatcaatcgtgtgttacttcatttcttttgttaaaattata 12090671  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  12090672 tgtcaatattatattattgg 12090691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 52434840 - 52434622
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  52434840 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 52434741  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  52434740 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 52434642  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  52434641 tgtcaatattatattattgg 52434622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 162 - 365
Target Start/End: Original strand, 16917907 - 16918119
Alignment:
Q  162 ctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatgcagatg 251  Q
    ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||||||||    
T  16917907 ctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatg 16918006  T
Q  252 ttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattatatgtcaa 351  Q
    ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  16918007 ttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattatatgtcaa 16918105  T
Q  352 tgttatattcttgg 365  Q
    | ||||||| ||||    
T  16918106 tattatattattgg 16918119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 156 - 359
Target Start/End: Complemental strand, 35760797 - 35760585
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| |||||||||  |||||||||||||||||| ||||||| ||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  35760797 cccgtgctgccgcacgagtcatatacattgtagatatagtagataaaaataaatctcaatgtatatcaaagagaatgaaatatgtggtcccaaatatatg 35760698  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  35760697 cagatgttggaattcgaacctcaaacaccacaattattcaccttaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 35760599  T
Q  346 tgtcaatgttatat 359  Q
    ||||||||||||||    
T  35760598 tgtcaatgttatat 35760585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 30824935 - 30825153
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| || ||||||| |||    
T  30824935 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggttccaaatatatg 30825034  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  30825035 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 30825133  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  30825134 tgtcaatattatattattgg 30825153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 217 - 365
Target Start/End: Original strand, 45977074 - 45977221
Alignment:
Q  217 agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgttt 316  Q
    |||||||||||||| |||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |    
T  45977074 agaatgaaatatgtggtcctaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaattgtgt 45977173  T
Q  317 gttacttcatttcttttgttaaaattatatgtcaatgttatattcttgg 365  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  45977174 gttacttca-ttcttttgttaaaattatatgtcaatgttatattattgg 45977221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 53143275 - 53143493
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| || |||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  53143275 cccgtgctgccgcacgggtcatatacattgtagatataatagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 53143374  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  53143375 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 53143473  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  53143474 tgtcaatattatattattgg 53143493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 157 - 365
Target Start/End: Complemental strand, 41387341 - 41387124
Alignment:
Q  157 ccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatgc 246  Q
    |||| |||||| || ||||||||||||||||||| ||||||||||| | ||||||||||           ||||| ||| |||| |||||||||| ||||    
T  41387341 ccgtgctgccgtacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtggtcccaaatatatgc 41387242  T
Q  247 agatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattatat 346  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||| ||||||||||||||||||||    
T  41387241 agatgctgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcgatcgtgtcttacttca-ttcttttgttaaaattatat 41387143  T
Q  347 gtcaatgttatattcttgg 365  Q
    |||||||||||||| ||||    
T  41387142 gtcaatgttatattattgg 41387124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 37651882 - 37651664
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| ||| |||||| |||    
T  37651882 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatgaaagagaatgaaatatgtggtctcaaatatatg 37651783  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  37651782 cagatgttggaattcgaacctcaaacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 37651684  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  37651683 tgtcaatattatattattgg 37651664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 217 - 365
Target Start/End: Original strand, 45782513 - 45782660
Alignment:
Q  217 agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgttt 316  Q
    |||||||||||||| |||| ||||| ||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  45782513 agaatgaaatatgtggtcctaaatatatgaagatgttggaatttgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgt 45782612  T
Q  317 gttacttcatttcttttgttaaaattatatgtcaatgttatattcttgg 365  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  45782613 gttacttca-ttcttttgttaaaattatatgtcaatgttatattattgg 45782660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 217 - 365
Target Start/End: Original strand, 48118615 - 48118762
Alignment:
Q  217 agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgttt 316  Q
    |||||||||||||| |||||||||| |||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||| |    
T  48118615 agaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcaaacaccacacgtattcaccttaaaaatattaatttttaccaatcgtgt 48118714  T
Q  317 gttacttcatttcttttgttaaaattatatgtcaatgttatattcttgg 365  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  48118715 gttacttca-ttcttttgttaaaattatatgtcaatgttatattattgg 48118762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 162 - 365
Target Start/End: Original strand, 39058376 - 39058588
Alignment:
Q  162 ctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatgcagatg 251  Q
    ||||||||| ||||||||||||||||||| ||||||||||| | |||| | |||           |||||||||||||| |||||||||| ||  |||||    
T  39058376 ctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaattttaatatatatcaaagagaatgaaatatgtggtcccaaatatatcaagatg 39058475  T
Q  252 ttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattatatgtcaa 351  Q
    ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||    
T  39058476 ttggaattcgaacctcagataccacacttattcaccttaaaaatattaatttttatcaatcatgtgttacttca-ttcttttgttaaaattatatgtcaa 39058574  T
Q  352 tgttatattcttgg 365  Q
    ||||||||| ||||    
T  39058575 tgttatattattgg 39058588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 217 - 365
Target Start/End: Original strand, 31966053 - 31966200
Alignment:
Q  217 agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgttt 316  Q
    |||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |    
T  31966053 agaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgt 31966152  T
Q  317 gttacttcatttcttttgttaaaattatatgtcaatgttatattcttgg 365  Q
    ||||||||| |||||||||||||||||||||||||| ||||||| ||||    
T  31966153 gttacttca-ttcttttgttaaaattatatgtcaatattatattattgg 31966200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 166 - 365
Target Start/End: Original strand, 31628510 - 31628718
Alignment:
Q  166 cgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatgcagatgttga 255  Q
    ||||| ||||||||||||||||||||| ||||||||| | | ||||||||           ||||| |||||||| ||| |||||| ||||||||||||     
T  31628510 cgcacgggtcatatacattgtagatgttgtagacaaaaacatatctcaatgcatatcaaagagaattaaatatgtggtctcaaatatatgcagatgttgg 31628609  T
Q  256 aattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattatatgtcaatgtt 355  Q
    ||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  31628610 aattcgaacctcatacaccacacttattcatcttaaaaatattattttttatcaatcgtgtgttacttca-ttcttttgttaaaattatatgtcaatgtt 31628708  T
Q  356 atattcttgg 365  Q
    ||||| ||||    
T  31628709 atattattgg 31628718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 217 - 365
Target Start/End: Original strand, 52098274 - 52098422
Alignment:
Q  217 agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatatt-aatttttatcaatcgtt 315  Q
    |||||||||||||| |||||||||| |||||||||||| ||||| ||| |||||||| |||||||||||||||||||||||| ||||||||||||||||     
T  52098274 agaatgaaatatgtggtcccaaatatatgcagatgttggaattcaaacttcagacacaacacttattcaccttaaaaatattaaatttttatcaatcgtg 52098373  T
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatattcttgg 365  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  52098374 tgttacttca-ttcttttgttaaaattatatgtcaatgttatattattgg 52098422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 47142813 - 47143031
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||| | ||||||||||           ||||||| |||||| ||| |||||| |||    
T  47142813 cccgtgctgccgcactggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgacatatgtggtctcaaatatatg 47142912  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||  ||||||||||||||||||||  ||||||||||||||||||||||||||||||| || || |||||||||| |||||||||||||||||||    
T  47142913 cagatgttagaattcgaacctcagacaccatgcttattcaccttaaaaatattaatttttatcgattgtgtgttacttca-ttcttttgttaaaattata 47143011  T
Q  346 tgtcaatgttatattcttgg 365  Q
    | ||||||||| ||| ||||    
T  47143012 tctcaatgttaaattattgg 47143031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 217 - 360
Target Start/End: Original strand, 50229790 - 50229933
Alignment:
Q  217 agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaa-tttttatcaatcgtt 315  Q
    ||||||||| |||| |||| ||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||     
T  50229790 agaatgaaacatgtggtccaaaatatatgcagatgttggaattcgaacctcagacaccatacttattcaccttaaaaatattaattttttatcaatagtg 50229889  T
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  50229890 tgttacttca-ttcttttgttaaaattatatgtcaatgttatatt 50229933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 217 - 365
Target Start/End: Complemental strand, 54625095 - 54624955
Alignment:
Q  217 agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgttt 316  Q
    |||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||      |    
T  54625095 agaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatca------t 54625002  T
Q  317 gttacttcatttcttttgttaaaattatatgtcaatgttatattcttgg 365  Q
    |||||||||||   |||||||||||||||||||||||||||||| ||||    
T  54625001 gttacttcatt--ctttgttaaaattatatgtcaatgttatattattgg 54624955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 290
Target Start/End: Original strand, 34684606 - 34684653
Alignment:
Q  243 atgcagatgttgaaattcgaacctcagacaccacacttattcacctta 290  Q
    ||||||| |||| ||||||||||||||||||| |||||||||||||||    
T  34684606 atgcagaggttggaattcgaacctcagacaccccacttattcacctta 34684653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 295
Target Start/End: Complemental strand, 6481626 - 6481589
Alignment:
Q  258 ttcgaacctcagacaccacacttattcaccttaaaaat 295  Q
    |||||||||||||| || ||||||||||||||||||||    
T  6481626 ttcgaacctcagacgccccacttattcaccttaaaaat 6481589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 12090730 - 12090773
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  12090730 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 12090773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 16905218 - 16905261
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  16905218 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 16905261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 16918158 - 16918201
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  16918158 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 16918201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 294
Target Start/End: Complemental strand, 23935068 - 23935032
Alignment:
Q  258 ttcgaacctcagacaccacacttattcaccttaaaaa 294  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  23935068 ttcgaacctcagacaccccacttattctccttaaaaa 23935032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 30825192 - 30825235
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  30825192 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 30825235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 31966239 - 31966282
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  31966239 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 31966282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 294
Target Start/End: Complemental strand, 37997888 - 37997852
Alignment:
Q  258 ttcgaacctcagacaccacacttattcaccttaaaaa 294  Q
    |||||||| |||||||| |||||||||||||||||||    
T  37997888 ttcgaaccccagacaccccacttattcaccttaaaaa 37997852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 39058622 - 39058665
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  39058622 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 39058665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 45977264 - 45977307
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  45977264 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 45977307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 47143070 - 47143113
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  47143070 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 47143113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 48118802 - 48118845
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  48118802 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 48118845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 50229712 - 50229744
Alignment:
Q  183 ttgtagatgtagtagacaaagaaaaatctcaat 215  Q
    |||||||||||||||||||| ||||||||||||    
T  50229712 ttgtagatgtagtagacaaaaaaaaatctcaat 50229744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 52098460 - 52098503
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  52098460 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 52098503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 52434583 - 52434540
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  52434583 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 52434540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 53143534 - 53143577
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  53143534 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 53143577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 54624922 - 54624879
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  54624922 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 54624879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 1e-66; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 11725406 - 11725188
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| |||| |||| ||||||||||||||||||||||||||||||| | ||||||||||           |||||||||||||| ||| |||||| |||    
T  11725406 cccgtgctgctgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtctcaaatatatg 11725307  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  11725306 cagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 11725208  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||||||||||| ||||    
T  11725207 tgtcaatgttatattattgg 11725188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 18842120 - 18841902
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||           |||||||||||||| |||| ||||| |||    
T  18842120 cccgttctgccgcacgggtcatatacattgtagatgtagtagacaaaaataaatctcaatgcatatcaaagagaatgaaatatgtggtccaaaatatatg 18842021  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||    
T  18842020 cagatgttggaattcgaatctcagacaccacacttattcaccttaaaaatattaatttttatcaattgtatgttacttca-ttcttttgttaaaattata 18841922  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||||||||||| ||||    
T  18841921 tgtcaatgttatattattgg 18841902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 156 - 359
Target Start/End: Complemental strand, 28583071 - 28582859
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||||||||||| ||| | ||||||||||           |||||||||||||| ||| |||||| |||    
T  28583071 cccgtgctgccgcacgggtcatatacattgtagatgtagtagataaaaacaaatctcaatgtatatcaaagagaatgaaatatgtggtctcaaatatatg 28582972  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  28582971 cagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 28582873  T
Q  346 tgtcaatgttatat 359  Q
    ||||||||||||||    
T  28582872 tgtcaatgttatat 28582859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 167 - 365
Target Start/End: Complemental strand, 39257648 - 39257441
Alignment:
Q  167 gcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatgcagatgttgaa 256  Q
    |||| ||||||||||||||||||||||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||||||||||| |    
T  39257648 gcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttgga 39257549  T
Q  257 attcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattatatgtcaatgtta 356  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  39257548 atttgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattatatgtcaatgtta 39257450  T
Q  357 tattcttgg 365  Q
    |||| ||||    
T  39257449 tattattgg 39257441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 166 - 365
Target Start/End: Complemental strand, 40027006 - 40026798
Alignment:
Q  166 cgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatgcagatgttga 255  Q
    ||||| ||||||||||||||||||||||||||||||| | ||||||||||           | |||||||||||| |||||||||| ||||||||||||     
T  40027006 cgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagataatgaaatatgtggtcccaaatatatgcagatgttgg 40026907  T
Q  256 aattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattatatgtcaatgtt 355  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  40026906 aatttgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattatatgtcaatgtt 40026808  T
Q  356 atattcttgg 365  Q
    ||||| ||||    
T  40026807 atattattgg 40026798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 15961348 - 15961130
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  15961348 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 15961249  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  15961248 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 15961150  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  15961149 tgtcaatattatattattgg 15961130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 18997916 - 18997698
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  18997916 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 18997817  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  18997816 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 18997718  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  18997717 tgtcaatattatattattgg 18997698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 30473897 - 30474115
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  30473897 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 30473996  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  30473997 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 30474095  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  30474096 tgtcaatattatattattgg 30474115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 174 - 365
Target Start/End: Original strand, 28274245 - 28274445
Alignment:
Q  174 tcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcgaa 263  Q
    ||||||||||||||||||||| ||||||| | ||||||||||           |||||||||||||| |||||||||| | |||||||||| ||||||||    
T  28274245 tcatatacattgtagatgtagcagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatacgcagatgttggaattcgaa 28274344  T
Q  264 cctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattatatgtcaatgttatattctt 363  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||    
T  28274345 cctcatacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattatatgtcaatgttatattatt 28274443  T
Q  364 gg 365  Q
    ||    
T  28274444 gg 28274445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 163 - 365
Target Start/End: Complemental strand, 24409085 - 24408874
Alignment:
Q  163 tgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatgcagatgt 252  Q
    |||||||| ||||||||||||||||||||||||||| ||| | |||||| |||           | |||||||||||| |||||||||| ||||||||||    
T  24409085 tgccgcacgggtcatatacattgtagatgtagtagataaaaacaaatcttaatgcatatcaaagataatgaaatatgtggtcccaaatatatgcagatgt 24408986  T
Q  253 tgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattatatgtcaat 352  Q
    || ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  24408985 tggaattcgaacatcatacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattatatgtcaat 24408887  T
Q  353 gttatattcttgg 365  Q
    |||||||| ||||    
T  24408886 gttatattattgg 24408874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 163 - 365
Target Start/End: Original strand, 44832206 - 44832417
Alignment:
Q  163 tgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatgcagatgt 252  Q
    |||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| ||||||||||    
T  44832206 tgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgt 44832305  T
Q  253 tgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattatatgtcaat 352  Q
    || ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  44832306 tggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattatatgtcaat 44832404  T
Q  353 gttatattcttgg 365  Q
     ||||||| ||||    
T  44832405 attatattattgg 44832417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 6299033 - 6299251
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  6299033 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 6299132  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  6299133 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcctttgttaaaattata 6299231  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  6299232 tgtcaatattatattattgg 6299251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 10478153 - 10477935
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| ||| |||||| |||    
T  10478153 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcacaaatatatg 10478054  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  10478053 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 10477955  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  10477954 tgtcaatattatattattgg 10477935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 18175597 - 18175379
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  18175597 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 18175498  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||| ||||||| ||| |||||||||| |||||||||||||||||||    
T  18175497 cagatgttggaattcgaacctcagacaccacacttattcaccaaaaaaatattaattattatcaaacgtgtgttacttca-ttcttttgttaaaattata 18175399  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  18175398 tgtcaatattatattattgg 18175379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 18569081 - 18568863
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| || |||||| ||||||||||||||||||||| ||||||||| | | ||||||||           ||||| |||||||| |||||||||| |||    
T  18569081 cccgtgctaccgcacgggtcatatacattgtagatgttgtagacaaaaacatatctcaatgcatatcaaagagaataaaatatgtggtcccaaatatatg 18568982  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  18568981 cagatgttggaattcgaacctcaaacaccacacttattcatcttaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 18568883  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||||||||||| ||||    
T  18568882 tgtcaatgttatattattgg 18568863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 217 - 365
Target Start/End: Complemental strand, 19240808 - 19240661
Alignment:
Q  217 agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgttt 316  Q
    |||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |    
T  19240808 agaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcacgttaaaaatattaatttttatcaatggtgt 19240709  T
Q  317 gttacttcatttcttttgttaaaattatatgtcaatgttatattcttgg 365  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  19240708 gttacttca-ttcttttgttaaaattatatgtcaatgttatattattgg 19240661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 217 - 365
Target Start/End: Complemental strand, 19313992 - 19313845
Alignment:
Q  217 agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgttt 316  Q
    |||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |    
T  19313992 agaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcacgttaaaaatattaatttttatcaatggtgt 19313893  T
Q  317 gttacttcatttcttttgttaaaattatatgtcaatgttatattcttgg 365  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  19313892 gttacttca-ttcttttgttaaaattatatgtcaatgttatattattgg 19313845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 217 - 365
Target Start/End: Complemental strand, 19412977 - 19412829
Alignment:
Q  217 agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgttt 316  Q
    |||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |    
T  19412977 agaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacagttattcaccttaaaaatattaatttttatccatcgtgt 19412878  T
Q  317 gttacttcatttcttttgttaaaattatatgtcaatgttatattcttgg 365  Q
    |||||||||||  ||||||||||||||||||||||||||||||| ||||    
T  19412877 gttacttcattctttttgttaaaattatatgtcaatgttatattattgg 19412829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 32110874 - 32111092
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| || ||||||| |||    
T  32110874 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggttccaaatatatg 32110973  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  32110974 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 32111072  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  32111073 tgtcaatattatattattgg 32111092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 166 - 355
Target Start/End: Original strand, 35122345 - 35122543
Alignment:
Q  166 cgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatgcagatgttga 255  Q
    ||||| ||||||||||||||||||||||||||||||| | ||||||||||           |||||||||||||| |||| ||||| ||||||||||||     
T  35122345 cgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtccaaaatatatgcagatgttgg 35122444  T
Q  256 aattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattatatgtcaatgtt 355  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||    
T  35122445 aattcgaatctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttattaaaattatatgtcaatgtt 35122543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 995828 - 996046
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  995828 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 995927  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    || |||||| ||||||||||||||||||||| ||||||||||  ||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||    
T  995928 catatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaacttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 996026  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  996027 tgtcaatattatattattgg 996046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 217 - 365
Target Start/End: Original strand, 24004811 - 24004958
Alignment:
Q  217 agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgttt 316  Q
    ||||| ||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |    
T  24004811 agaataaaacatgtggtcccaaatatatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcatgt 24004910  T
Q  317 gttacttcatttcttttgttaaaattatatgtcaatgttatattcttgg 365  Q
     |||||||| |||||||||||||||||||||||||||||||||| ||||    
T  24004911 cttacttca-ttcttttgttaaaattatatgtcaatgttatattattgg 24004958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 44837125 - 44836907
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||| ||||||||||||||||||||||||||| | ||||||||||           ||||| |||||||| |||| ||||| |||    
T  44837125 cccgtgctgccgcacgggttatatacattgtagatgtagtagacaaaaataaatctcaatacatatcaaagagaataaaatatgtggtcctaaatatatg 44837026  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||    
T  44837025 cagatgttggaattcgaacctcagacaccacgcttattcaccttaaaaatattaatttttatcaattgtgtgttacttca-ttcttttgttaaaattata 44836927  T
Q  346 tgtcaatgttatattcttgg 365  Q
    | ||||||||| ||| ||||    
T  44836926 tctcaatgttaaattattgg 44836907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 11142683 - 11142459
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| | ||||||||||||||||||||||||||||| | ||||||||||           ||||||||||||||  ||||||||| |||    
T  11142683 cccgtgctgccgcacggatcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgctcccaaatatatg 11142584  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaattt------ttatcaatcgtttgttacttcatttcttttgttaaa 339  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||||| |||||||||| |||||||||||||    
T  11142583 cagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatttttatcaatcgtgtgttacttca-ttcttttgttaaa 11142485  T
Q  340 attatatgtcaatgttatattcttgg 365  Q
    ||||||||||| ||||||||| ||||    
T  11142484 attatatgtcagtgttatattattgg 11142459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 156 - 328
Target Start/End: Complemental strand, 39997907 - 39997725
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||| | ||||||||||           |||||||||||||| || ||||||| |||    
T  39997907 cccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgtatatcaaagagaatgaaatatgtggttccaaatatatg 39997808  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcattt 328  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  39997807 cagatgttggaattcgaacctcagacaccacacttattcacctttaaaatattaatttttatcaatcgtgtgttacttcattt 39997725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 175 - 360
Target Start/End: Original strand, 18210656 - 18210850
Alignment:
Q  175 catatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcgaac 264  Q
    |||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| ||| |||||| |||||||||||| |||| ||||    
T  18210656 catatacattgtagatatagtagacaaaaataaatctcaatgcatatcaaagagaatgaaatatgtggtctcaaatatatgcagatgttggaatttgaac 18210755  T
Q  265 ctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||  ||||||||||||| ||||||||||||||||||||    
T  18210756 ctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttatttc-cttcttttgttaaagttatatgtcaatgttatatt 18210850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 244 - 365
Target Start/End: Original strand, 23353688 - 23353808
Alignment:
Q  244 tgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaatta 343  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  23353688 tgcagatgttggaattcgaacctcagacaccccacttattcaccttaaaaatattaatttttatcaatggtgtgttacttca-ttcttttgttaaaatta 23353786  T
Q  344 tatgtcaatgttatattcttgg 365  Q
    ||||||||||||||||| ||||    
T  23353787 tatgtcaatgttatattattgg 23353808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 275 - 365
Target Start/End: Original strand, 25875441 - 25875530
Alignment:
Q  275 acacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattatatgtcaatgttatattcttgg 365  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| ||||    
T  25875441 acacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttca-ttcttttgttaaaattatatgtcaatgttatattattgg 25875530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 302 - 365
Target Start/End: Original strand, 18481929 - 18481991
Alignment:
Q  302 ttttatcaatcgtttgttacttcatttcttttgttaaaattatatgtcaatgttatattcttgg 365  Q
    ||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||| ||||    
T  18481929 ttttatcaatcgtgtcttacttcatt-cttttgttaaaattatatgtcaatgttatattattgg 18481991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 23353635 - 23353680
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaa 201  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||    
T  23353635 cccgtgctgccgcacgggtcatatacattgtagatgtagtagacaa 23353680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 316 - 365
Target Start/End: Complemental strand, 39997708 - 39997660
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatattcttgg 365  Q
    |||||||||||| ||||||| |||||||||||||||||||||||| ||||    
T  39997708 tgttacttcatt-cttttgtaaaaattatatgtcaatgttatattattgg 39997660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 292
Target Start/End: Original strand, 33155319 - 33155368
Alignment:
Q  243 atgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaa 292  Q
    |||||||||||| | |||||| | ||||||| ||||||||||||||||||    
T  33155319 atgcagatgttggagttcgaatcccagacacgacacttattcaccttaaa 33155368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 6299290 - 6299333
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  6299290 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 6299333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 10477896 - 10477853
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  10477896 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 10477853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 11142424 - 11142381
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  11142424 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 11142381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 11725149 - 11725106
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  11725149 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 11725106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 290
Target Start/End: Complemental strand, 13702394 - 13702362
Alignment:
Q  258 ttcgaacctcagacaccacacttattcacctta 290  Q
    ||||||||||||||||| |||||||||||||||    
T  13702394 ttcgaacctcagacacctcacttattcacctta 13702362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 18175340 - 18175297
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  18175340 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 18175297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 18997659 - 18997616
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  18997659 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 18997616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 19240623 - 19240580
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  19240623 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 19240580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 19313807 - 19313764
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  19313807 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 19313764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 19412795 - 19412752
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  19412795 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 19412752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 23353846 - 23353889
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  23353846 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 23353889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 24408838 - 24408795
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  24408838 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 24408795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 30474153 - 30474196
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  30474153 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 30474196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 32111131 - 32111174
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  32111131 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 32111174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 35122585 - 35122628
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  35122585 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 35122628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 39997623 - 39997580
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  39997623 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 39997580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 44832457 - 44832500
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  44832457 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 44832500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 44836867 - 44836824
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  44836867 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 44836824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 125; Significance: 3e-64; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 19596376 - 19596594
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  19596376 cccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatattaaagagaatgaaatatgtggtcccaaatatatg 19596475  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||    
T  19596476 cagatgttggaattcgaacctcagacaccacgcttattcaccttaaaaatattaatttttatcaattgtgtgttacttca-ttcttttgttaaaattata 19596574  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||||||| ||| ||||    
T  19596575 tgtcaatgttaaattattgg 19596594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 8700477 - 8700259
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||| | |||| |||||           |||||||||||||| |||||||||| |||    
T  8700477 cccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatttcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 8700378  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  8700377 cagatgttggaattcgaacctcatacaccacattttttcaccttaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 8700279  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||||||||||| ||||    
T  8700278 tgtcaatgttatattattgg 8700259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 31424225 - 31424007
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| |||||||||  |||||||||||||||||||||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  31424225 cccgtgctgccgcacgagtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 31424126  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
     |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||    
T  31424125 tagatgttggaattcgaacctcatacaccacacttattcaccttaaaaatattaatttttatcaattgtgtgttacttca-ttcttttgttaaaattata 31424027  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||||||||||| ||||    
T  31424026 tgtcaatgttatattattgg 31424007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 26231272 - 26231490
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| || |||||||||| ||||||||||||||||||||||||||| | |||| |||||           |||||||||||||| ||| |||||| ||     
T  26231272 cccgtgctaccgcacaggttatatacattgtagatgtagtagacaaaaacaaatttcaatgcatatcaaagagaatgaaatatgtggtctcaaatatatt 26231371  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  26231372 cagatgttggaattcgaacctcagacaccacacttattcatcttaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 26231470  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||||||||||| ||||    
T  26231471 tgtcaatgttatattattgg 26231490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 41664726 - 41664508
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  41664726 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 41664627  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  41664626 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 41664528  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  41664527 tgtcaatattatattattgg 41664508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 173 - 365
Target Start/End: Original strand, 36279484 - 36279685
Alignment:
Q  173 gtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcga 262  Q
    |||||||||||||||||||||||||||||| | |||| |||||           |||||||||||||| |||||||||| |||||||||||| |||||||    
T  36279484 gtcatatacattgtagatgtagtagacaaaaacaaatatcaatgtatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcga 36279583  T
Q  263 acctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattatatgtcaatgttatattct 362  Q
    | |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |    
T  36279584 atctcagataccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattatatgtcaatgttatattat 36279682  T
Q  363 tgg 365  Q
    |||    
T  36279683 tgg 36279685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 6120768 - 6120550
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  6120768 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 6120669  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||    
T  6120668 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaactata 6120570  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  6120569 tgtcaatattatattattgg 6120550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 18351767 - 18351549
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  18351767 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 18351668  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  18351667 cagatgttggaattcgaacctcaaacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 18351569  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  18351568 tgtcaatattatattattgg 18351549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 41663453 - 41663235
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||  ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  41663453 cccgtgctgccgcatgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 41663354  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  41663353 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 41663255  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  41663254 tgtcaatattatattattgg 41663235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 217 - 360
Target Start/End: Original strand, 34007793 - 34007935
Alignment:
Q  217 agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgttt 316  Q
    ||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |    
T  34007793 agaatgaaatatgtagtcccaaatatatgccgatgttggaattcgaacctcagacaccacacttatccaccttaaaaatattaatttttataaatcgtgt 34007892  T
Q  317 gttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  34007893 gttacttca-ttcttttgttaaaattatatgtcaatgttatatt 34007935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 165 - 365
Target Start/End: Complemental strand, 42055404 - 42055197
Alignment:
Q  165 ccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatgcagatgttg 254  Q
    |||||| ||||||||||||||||||||||||||||||| | ||||||||||           ||||||||||| ||  ||||||||| ||||||||||||    
T  42055404 ccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaataggtgatcccaaatatatgcagatgttg 42055305  T
Q  255 aaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattatatgtcaatgt 354  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||  |||||||||||    
T  42055304 gaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaagat--tatgtcaatgt 42055208  T
Q  355 tatattcttgg 365  Q
    |||||| ||||    
T  42055207 tatattattgg 42055197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 217 - 365
Target Start/End: Original strand, 999315 - 999462
Alignment:
Q  217 agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgttt 316  Q
    ||||| ||| |||| |||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  999315 agaataaaacatgtggtcccaaatatatgtagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgt 999414  T
Q  317 gttacttcatttcttttgttaaaattatatgtcaatgttatattcttgg 365  Q
     |||||||| |||||||||||||||||||||||||||||||||| ||||    
T  999415 cttacttca-ttcttttgttaaaattatatgtcaatgttatattattgg 999462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 44902297 - 44902080
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  44902297 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 44902198  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| |||||||||   ||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||    
T  44902197 cagatgttggaattcgaacctcagacaccacgcttattcacaaaaaaaata-taatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 44902100  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  44902099 tgtcaatattatattattgg 44902080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 156 - 360
Target Start/End: Complemental strand, 20545041 - 20544828
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| | ||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  20545041 cccgtgctgccgcacgggtcatatacattgtagatatggtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 20544942  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||  ||||||||||| | ||||||| ||||||||||  ||||||||||||||||||||||||| || ||||||| |||||||||||||||||||    
T  20544941 cagatgttagaattcgaacctaaaacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtggtacttca-ttcttttgttaaaattata 20544843  T
Q  346 tgtcaatgttatatt 360  Q
    ||||||| |||||||    
T  20544842 tgtcaatattatatt 20544828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 163 - 365
Target Start/End: Complemental strand, 42442173 - 42441958
Alignment:
Q  163 tgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatgcagatgt 252  Q
    |||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| ||||||||||    
T  42442173 tgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgt 42442074  T
Q  253 tgaaattcgaa------cctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattatat 346  Q
    || ||||||||      ||||||||||||| ||||||||||  ||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||    
T  42442073 tggaattcgaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcg--tgttacttca-ttcttttgttaaaattatat 42441977  T
Q  347 gtcaatgttatattcttgg 365  Q
    |||||| ||||||| ||||    
T  42441976 gtcaatattatattattgg 42441958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 217 - 365
Target Start/End: Complemental strand, 16214969 - 16214822
Alignment:
Q  217 agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgttt 316  Q
    |||||||||||||| |||| ||||| ||||| |||| | ||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||| |    
T  16214969 agaatgaaatatgtggtccaaaatatatgcaaatgtaggaattcgaacctctaacaccacacttattcaccttaaaaatattaatttttattaatcgtgt 16214870  T
Q  317 gttacttcatttcttttgttaaaattatatgtcaatgttatattcttgg 365  Q
    ||||||||| |||||||||||||||||||||||| ||||| ||| ||||    
T  16214869 gttacttca-ttcttttgttaaaattatatgtcagtgttacattattgg 16214822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 172 - 299
Target Start/End: Original strand, 692231 - 692368
Alignment:
Q  172 ggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcg 261  Q
    |||||||||||||||| |||||||||||||| | ||||||||||           |||||||||||| | |||||||||| |||||||||||| ||||||    
T  692231 ggtcatatacattgtaaatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatatggtcccaaatatatgcagatgttggaattcg 692330  T
Q  262 aacctcagacaccacacttattcaccttaaaaatatta 299  Q
    ||||||||||||||||||||||||||||||||||||||    
T  692331 aacctcagacaccacacttattcaccttaaaaatatta 692368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 156 - 286
Target Start/End: Original strand, 27944809 - 27944949
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  27944809 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 27944908  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcac 286  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  27944909 cagatgttggaattcgaacctcagacaccacgcttattcac 27944949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 19596634 - 19596677
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| |||||||||||||||||||| |||||||||||    
T  19596634 tgttacttcatt-cttttgttaaaattatatgttaatgttatatt 19596677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 31572497 - 31572451
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaa 202  Q
    ||||| ||||||||| ||||||||||||||||  |||||||||||||    
T  31572497 cccgtgctgccgcacgggtcatatacattgtaagtgtagtagacaaa 31572451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 290
Target Start/End: Original strand, 3179377 - 3179409
Alignment:
Q  258 ttcgaacctcagacaccacacttattcacctta 290  Q
    ||||||||||||||||| |||||||||||||||    
T  3179377 ttcgaacctcagacaccccacttattcacctta 3179409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 6120510 - 6120467
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  6120510 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 6120467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 16214784 - 16214741
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  16214784 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 16214741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 18351510 - 18351467
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  18351510 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 18351467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 26231527 - 26231570
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  26231527 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 26231570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 31423967 - 31423924
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  31423967 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 31423924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 34007980 - 34008023
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  34007980 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 34008023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 41663195 - 41663152
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  41663195 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 41663152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 42441919 - 42441876
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  42441919 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 42441876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 6e-62; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 1396205 - 1395987
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| |||||||||||||| |||||||| ||||||| | ||||||||||           |||||||||||||| ||||||||||  ||    
T  1396205 cccgtgctgccgcacgggtcatatacattgcagatgtagcagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatctg 1396106  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  1396105 cagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcagtcgtgtgttacttca-ttcttttgttaaaattata 1396007  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||||||||||| ||||    
T  1396006 tgtcaatgttatattattgg 1395987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 20655062 - 20655280
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||| | ||||||||||           ||||| ||| |||| |||||||||| |||    
T  20655062 cccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtggtcccaaatatatg 20655161  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||| |||||||||||||||||||    
T  20655162 cagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaattgtgtcttacttca-ttcttttgttaaaattata 20655260  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||||||||||| ||||    
T  20655261 tgtcaatgttatattattgg 20655280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 166 - 365
Target Start/End: Complemental strand, 5479402 - 5479194
Alignment:
Q  166 cgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatgcagatgttga 255  Q
    ||||| ||||||||||||||||||||||||||||||| | ||||||||||           ||||||||||||||  ||||||||| ||| ||||||||     
T  5479402 cgcacgggtcatatacattgtagatgtagtagacaaaaataaatctcaatgcatatcaaagagaatgaaatatgtgatcccaaatatatgtagatgttgg 5479303  T
Q  256 aattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattatatgtcaatgtt 355  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  5479302 aattcgaacctcagacactacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattatatgtcaatgtt 5479204  T
Q  356 atattcttgg 365  Q
    ||||| ||||    
T  5479203 atattattgg 5479194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 20874904 - 20874686
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  20874904 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 20874805  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  20874804 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 20874706  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  20874705 tgtcaatattatattattgg 20874686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 217 - 365
Target Start/End: Complemental strand, 27648075 - 27647928
Alignment:
Q  217 agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgttt 316  Q
    |||||||||||||| |||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  27648075 agaatgaaatatgtggtcccaaatatatacagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgt 27647976  T
Q  317 gttacttcatttcttttgttaaaattatatgtcaatgttatattcttgg 365  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  27647975 gttacttca-ttcttttgttaaaattatatgtcaatgttatattgttgg 27647928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 34107351 - 34107569
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  34107351 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 34107450  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  34107451 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 34107549  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  34107550 tgtcaatattatattattgg 34107569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 34110868 - 34110650
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  34110868 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 34110769  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  34110768 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 34110670  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  34110669 tgtcaatattatattattgg 34110650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 38246878 - 38247096
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  38246878 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 38246977  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  38246978 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 38247076  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  38247077 tgtcaatattatattattgg 38247096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 33375980 - 33375760
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagt--cccaaataca 243  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||| | ||||||||||           ||||| ||| |||| ||  |||||||| |    
T  33375980 cccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtggtgtcccaaatata 33375881  T
Q  244 tgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaatta 343  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||    
T  33375880 tgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttca-ttcttttgttaaaatta 33375782  T
Q  344 tatgtcaatgttatattcttgg 365  Q
    ||||||||||||||||| ||||    
T  33375781 tatgtcaatgttatattattgg 33375760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 10729455 - 10729673
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  10729455 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatccaagagaatgaaatatgtggtcccaaatatatg 10729554  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  |||||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  10729555 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattattttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 10729653  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  10729654 tgtcaatattatattattgg 10729673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 16526319 - 16526537
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  16526319 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 16526418  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  16526419 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttc-gttcttttgttaaaattata 16526517  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  16526518 tgtcaatattatattattgg 16526537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 217 - 365
Target Start/End: Complemental strand, 29275769 - 29275622
Alignment:
Q  217 agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgttt 316  Q
    ||||||||| |||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |    
T  29275769 agaatgaaacatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaacttttatcaatcgtgt 29275670  T
Q  317 gttacttcatttcttttgttaaaattatatgtcaatgttatattcttgg 365  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  29275669 gttacttca-ttcttttgttaaaattatatgtcaatgttatattattgg 29275622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 162 - 365
Target Start/End: Original strand, 24223183 - 24223395
Alignment:
Q  162 ctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatgcagatg 251  Q
    ||||||||| |||||||||||| |||||||||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||||||||    
T  24223183 ctgccgcacgggtcatatacatcgtagatgtagtagacaaaaacaaatctcaatgcatatgaaagagaatgaaatatgtggtcccaaatatatgcagatg 24223282  T
Q  252 ttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattatatgtcaa 351  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||| |||||||||| |||||||||||||| ||||||||||    
T  24223283 ttggaattcgaacctcagacaccacacttattcaccttaaaaatattactctttaccaatcgtgtgttacttca-ttcttttgttaaaagtatatgtcaa 24223381  T
Q  352 tgttatattcttgg 365  Q
    ||| ||||| ||||    
T  24223382 tgtgatattattgg 24223395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 2398955 - 2399171
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  2398955 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 2399054  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||  |||||||||| |||||||||||||||||||    
T  2399055 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcg--tgttacttca-ttcttttgttaaaattata 2399151  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  2399152 tgtcaatattatattattgg 2399171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 217 - 365
Target Start/End: Original strand, 1394570 - 1394717
Alignment:
Q  217 agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgttt 316  Q
    |||||||||||||| |||||||||| |||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |    
T  1394570 agaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcaaacaccacacttgttcaccttaaaaatattaatttttatcaatcgtgt 1394669  T
Q  317 gttacttcatttcttttgttaaaattatatgtcaatgttatattcttgg 365  Q
    ||||||||| ||||||||||||| |||||||||||||||||||| ||||    
T  1394670 gttacttca-ttcttttgttaaatttatatgtcaatgttatattattgg 1394717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 217 - 365
Target Start/End: Original strand, 6940587 - 6940734
Alignment:
Q  217 agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgttt 316  Q
    |||||||||||||| |||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |    
T  6940587 agaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcatacaccacacttattcacctgaaaaatattaatttttatcaatcgtat 6940686  T
Q  317 gttacttcatttcttttgttaaaattatatgtcaatgttatattcttgg 365  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| ||||    
T  6940687 gttacttca-ttcttttgttaaaattatatgtcaacgttatattattgg 6940734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 25099249 - 25099467
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||| | |||||| |||           ||||| ||| |||| ||| |||||| |||    
T  25099249 cccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctgaatgcatatcaaagagaataaaacatgtggtcacaaatatatg 25099348  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||    
T  25099349 cagatgttggaattcgaacctcaggcaccacacttattcgccttaaaaatattaatttttatcaatcgtgtcttacttca-ttcttttgttaaaattata 25099447  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||||||||||| ||||    
T  25099448 tgtcaatgttatattattgg 25099467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 25158339 - 25158557
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||| | |||||| |||           ||||| ||| |||| ||| |||||| |||    
T  25158339 cccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctgaatgcatatcaaagagaataaaacatgtggtcacaaatatatg 25158438  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||    
T  25158439 cagatgttggaattcgaacctcaggcaccacacttattcgccttaaaaatattaatttttatcaatcgtgtcttacttca-ttcttttgttaaaattata 25158537  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||||||||||| ||||    
T  25158538 tgtcaatgttatattattgg 25158557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 17373174 - 17373395
Alignment:
Q  156 cccgttctgccgcacaggtcatata---cattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatac 242  Q
    ||||| ||||||||| |||||||||   |||||||||| ||||||||||| | ||||||||||           |||||||||||||| ||||||||||     
T  17373174 cccgtgctgccgcacgggtcatatagtacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatat 17373273  T
Q  243 atgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaatt 342  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  17373274 atgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaatt 17373372  T
Q  343 atatgtcaatgttatattcttgg 365  Q
    |||||||||| ||||||| ||||    
T  17373373 atatgtcaatattatattattgg 17373395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 217 - 365
Target Start/End: Original strand, 33570391 - 33570538
Alignment:
Q  217 agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgttt 316  Q
    |||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |    
T  33570391 agaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgt 33570490  T
Q  317 gttacttcatttcttttgttaaaattatatgtcaatgttatattcttgg 365  Q
    ||||||||| |||||||||||||||||||||||||| ||||||| ||||    
T  33570491 gttacttca-ttcttttgttaaaattatatgtcaatattatattattgg 33570538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 217 - 365
Target Start/End: Original strand, 14141191 - 14141338
Alignment:
Q  217 agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgttt 316  Q
    |||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |    
T  14141191 agaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgt 14141290  T
Q  317 gttacttcatttcttttgttaaaattatatgtcaatgttatattcttgg 365  Q
    ||||||||| ||||||||||||||||||||| |||| ||||||| ||||    
T  14141291 gttacttca-ttcttttgttaaaattatatgccaatattatattattgg 14141338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 217 - 360
Target Start/End: Complemental strand, 17913886 - 17913744
Alignment:
Q  217 agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgttt 316  Q
    ||||| ||| |||| |||||||||| ||| |||||||| ||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| |    
T  17913886 agaataaaacatgtggtcccaaatatatgtagatgttggaattcgaacctcaaataccacacttattcaccttaaaaatattaatctttatcaatcgtgt 17913787  T
Q  317 gttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
     |||||||| ||||||||||||||||||||||||||||||||||    
T  17913786 cttacttca-ttcttttgttaaaattatatgtcaatgttatatt 17913744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 156 - 283
Target Start/End: Complemental strand, 40177257 - 40177120
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  40177257 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatataaaagagaatgaaatatgtggtcccaaatatatg 40177158  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttatt 283  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  40177157 cagatgttggaattcgaacctcagacaccacgcttatt 40177120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 295
Target Start/End: Complemental strand, 18101991 - 18101954
Alignment:
Q  258 ttcgaacctcagacaccacacttattcaccttaaaaat 295  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  18101991 ttcgaaccccagacaccccacttattcaccttaaaaat 18101954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 1395950 - 1395907
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  1395950 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 1395907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 2399210 - 2399253
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  2399210 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 2399253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 290
Target Start/End: Complemental strand, 4317008 - 4316976
Alignment:
Q  258 ttcgaacctcagacaccacacttattcacctta 290  Q
    ||||||||||| |||||||||||||||||||||    
T  4317008 ttcgaacctcaaacaccacacttattcacctta 4316976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 5479158 - 5479115
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  5479158 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 5479115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 6940768 - 6940811
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  6940768 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 6940811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 10729712 - 10729755
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  10729712 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 10729755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 14141377 - 14141420
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  14141377 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 14141420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 16526577 - 16526620
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  16526577 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 16526620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 17373434 - 17373477
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  17373434 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 17373477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 20874647 - 20874604
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  20874647 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 20874604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 24223434 - 24223477
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  24223434 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 24223477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 27647888 - 27647845
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  27647888 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 27647845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 33570578 - 33570621
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  33570578 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 33570621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 34107608 - 34107651
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  34107608 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 34107651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 34110609 - 34110566
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  34110609 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 34110566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 38247135 - 38247178
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  38247135 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 38247178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 40177076 - 40177033
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  40177076 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 40177033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 118; Significance: 4e-60; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 163 - 365
Target Start/End: Complemental strand, 38444840 - 38444629
Alignment:
Q  163 tgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatgcagatgt 252  Q
    |||||||  ||||||||||||||||||||||||||||||| | ||||||||||           |||||||||||||| |||||||||| ||||||||||    
T  38444840 tgccgcatgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgt 38444741  T
Q  253 tgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattatatgtcaat 352  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||| |||||||| |||||||||||||||||    
T  38444740 tgaaattcgaacttcagacaccacacttattcaccttaaaaatattaatttttatcaataatgtgttacttca-ttcttttgataaaattatatgtcaat 38444642  T
Q  353 gttatattcttgg 365  Q
    |||||||| ||||    
T  38444641 gttatattattgg 38444629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 4266597 - 4266379
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  4266597 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 4266498  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  4266497 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 4266399  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  4266398 tgtcaatattatattattgg 4266379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 23482720 - 23482938
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| |||||||||  |||||||||||||||||||||||||||||| | ||||||||||           || ||||||||||| |||||||||| |||    
T  23482720 cccgtgctgccgcacgagtcatatacattgtagatgtagtagacaaatacaaatctcaatgcatatcaaagagcatgaaatatgtggtcccaaatatatg 23482819  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  23482820 cagatgttggaattcgaacctcatacaccacacttattcacctgaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 23482918  T
Q  346 tgtcaatgttatattcttgg 365  Q
    |||||| |||||||| ||||    
T  23482919 tgtcaacgttatattattgg 23482938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 34888699 - 34888917
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  34888699 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 34888798  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  34888799 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 34888897  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  34888898 tgtcaatattatattattgg 34888917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 38913760 - 38913978
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  38913760 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 38913859  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  38913860 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 38913958  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  38913959 tgtcaatattatattattgg 38913978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 9216247 - 9216029
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||| ||| | ||||||||||           ||||| ||| |||| |||||||||| |||    
T  9216247 cccgtgctgccgcacgggtcatatacattgtagatatagtagataaaaacaaatctcaatgcatatcaaagagaataaaacatgtggtcccaaatatatg 9216148  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||    
T  9216147 cagatgttggaattcgaacctcagacaccacacttatttaccttaaaaatattaatttttatcaatcgtgtcttacttca-ttcttttgttaaaattata 9216049  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||||||||||| ||||    
T  9216048 tgtcaatgttatattattgg 9216029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 35614283 - 35614065
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| || |||||| |||||||||||||||| |||||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  35614283 cccgtgctaccgcacgggtcatatacattgtaaatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 35614184  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  35614183 cagatgttggaattcgaacttaagacaccacacttattcacctgaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 35614085  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||||| ||||| ||||    
T  35614084 tgtcaatgtcatattattgg 35614065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 156 - 360
Target Start/End: Original strand, 52687127 - 52687339
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||| ||||| ||||||||||||||||||||||||| ||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  52687127 cccgtgctgtcgcacgggtcatatacattgtagatgtagtatacaaaaacaaatctcaatgcctatgaaagagaatgaaatatgtggtcccaaatatatg 52687226  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||    
T  52687227 cagatgttggaatccgaacctca-acaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattt-ttttattaaaattata 52687324  T
Q  346 tgtcaatgttatatt 360  Q
    |||||||||||||||    
T  52687325 tgtcaatgttatatt 52687339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 18855246 - 18855463
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaa---------atctcaatcagaatgaaatatgtagtcccaaatacatgc 246  Q
    ||||| ||||||||| |||||||||||||||||||| ||||||||||  |||         || ||||  ||||| ||| |||| |||||||||| |||     
T  18855246 cccgtgctgccgcacgggtcatatacattgtagatgcagtagacaaatcaaatctcaatgcatatcaaagagaataaaacatgtggtcccaaatatatgt 18855345  T
Q  247 agatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattatat 346  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||| ||||||||||||||||||||    
T  18855346 agatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcatgtattacttca-ttcttttgttaaaattatat 18855444  T
Q  347 gtcaatgttatattcttgg 365  Q
    |||||||||||||| ||||    
T  18855445 gtcaatgttatattattgg 18855463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 167 - 365
Target Start/End: Complemental strand, 50151265 - 50151058
Alignment:
Q  167 gcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatgcagatgttgaa 256  Q
    |||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||||||||||| |    
T  50151265 gcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttgga 50151166  T
Q  257 attcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattatatgtcaatgtta 356  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||    
T  50151165 attcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattatatgtcaatatta 50151067  T
Q  357 tattcttgg 365  Q
    |||| ||||    
T  50151066 tattattgg 50151058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 2951379 - 2951597
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| |||||||||||||||| || || || ||||| ||||||||||||           |||||||||||||| |||||||||| |||    
T  2951379 cccgtgctgccgcacgggtcatatacattgtaaatataataaacaaaaaaaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 2951478  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  2951479 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 2951577  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  2951578 tgtcaatattatattattgg 2951597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 217 - 365
Target Start/End: Complemental strand, 7334089 - 7333942
Alignment:
Q  217 agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgttt 316  Q
    ||||| |||||||| |||||||||| |||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  7334089 agaataaaatatgtggtcccaaatatatgcagatgttggaattcaaacctcagacaccacacttattcaccataaaaatattaatttttatcaatcgtgt 7333990  T
Q  317 gttacttcatttcttttgttaaaattatatgtcaatgttatattcttgg 365  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  7333989 gttacttca-ttcttttgttaaaattatatgtcaatgttatattattgg 7333942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 217 - 365
Target Start/End: Complemental strand, 39728125 - 39727978
Alignment:
Q  217 agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgttt 316  Q
    ||||| ||| |||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  39728125 agaataaaacatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgt 39728026  T
Q  317 gttacttcatttcttttgttaaaattatatgtcaatgttatattcttgg 365  Q
     |||||||| |||||||||||||||||||||||||||||||||| ||||    
T  39728025 cttacttca-ttcttttgttaaaattatatgtcaatgttatattattgg 39727978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 18706522 - 18706739
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| |||||||||  |||||||||||||||||||||||||||||| | |||||| |||           |||||||||||||| |||| ||||| |||    
T  18706522 cccgtgctgccgcacgagtcatatacattgtagatgtagtagacaaaaacaaatcttaatgcatatcaaagagaatgaaatatgtggtcc-aaatatatg 18706620  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||    
T  18706621 cagatgttggaattcgaacctcatacaccacacttattcacctgaaaaatattaatttttatcaatcgtgtgtaacttca-ttcttttgttaaaattata 18706719  T
Q  346 tgtcaatgttatattcttgg 365  Q
    |||||| |||||||| ||||    
T  18706720 tgtcaacgttatattattgg 18706739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 156 - 346
Target Start/End: Complemental strand, 1232012 - 1231813
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| |||||||||||||||| || ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  1232012 cccgtgctgccgcacgggtcatatacattgtaaatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 1231913  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  1231912 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 1231814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 224 - 365
Target Start/End: Complemental strand, 19768602 - 19768462
Alignment:
Q  224 aatatgtagtcccaaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttactt 323  Q
    ||||||| || ||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||    
T  19768602 aatatgtggttccaaatacatgtagatgttgaatttcgaacctcagacaccacacttattcatcttaaaaatattattttttatcaatcgtgtgttactt 19768503  T
Q  324 catttcttttgttaaaattatatgtcaatgttatattcttgg 365  Q
    || |||||||||||||||||||||||||||||||||| ||||    
T  19768502 ca-ttcttttgttaaaattatatgtcaatgttatattattgg 19768462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 217 - 360
Target Start/End: Complemental strand, 35614960 - 35614819
Alignment:
Q  217 agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgttt 316  Q
    |||||||||||||| ||| |||||| |||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |    
T  35614960 agaatgaaatatgtggtctcaaatatatgcagatgttggaattcgaacctcagacaccacacttatttacctt-aaaatattaatttttatcaatcgtgt 35614862  T
Q  317 gttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    ||||||||| |||||||||||||||||||||||||||| |||||    
T  35614861 gttacttca-ttcttttgttaaaattatatgtcaatgtcatatt 35614819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 19764634 - 19764771
Alignment:
Q  217 agaatgaaatatgtagtcccaaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgttt 316  Q
    |||||||||||||| |||||||||| ||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |    
T  19764634 agaatgaaatatgtggtcccaaatatatgcaaatgtttgaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatgaatcgtgt 19764733  T
Q  317 gttacttcatttcttttgttaaaattatatgtcaatgtt 355  Q
    ||||||||| || |||||||||||||| |||||||||||    
T  19764734 gttacttca-ttattttgttaaaattacatgtcaatgtt 19764771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 235 - 365
Target Start/End: Complemental strand, 2590461 - 2590333
Alignment:
Q  235 ccaaatacatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttg 334  Q
    ||||||| |||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||    
T  2590461 ccaaatatatgcagatgttcgaattc-aacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttca-ttcttttg 2590364  T
Q  335 ttaaaattatatgtcaatgttatattcttgg 365  Q
    |||||||||||||||||||||||||| ||||    
T  2590363 ttaaaattatatgtcaatgttatattattgg 2590333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 156 - 287
Target Start/End: Original strand, 31018213 - 31018354
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  31018213 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 31018312  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcacc 287  Q
    ||||||||| ||||||||||||||||||||| ||||||||||    
T  31018313 cagatgttggaattcgaacctcagacaccacgcttattcacc 31018354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 156 - 287
Target Start/End: Complemental strand, 50326217 - 50326076
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  50326217 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 50326118  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcacc 287  Q
    ||||||||| ||||||||||||||||||||| ||||||||||    
T  50326117 cagatgttggaattcgaacctcagacaccacgcttattcacc 50326076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 29942234 - 29942175
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaat 215  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||    
T  29942234 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaat 29942175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 294
Target Start/End: Original strand, 50575954 - 50575990
Alignment:
Q  258 ttcgaacctcagacaccacacttattcaccttaaaaa 294  Q
    ||||||||||||||||| |||||||||||||||||||    
T  50575954 ttcgaacctcagacacctcacttattcaccttaaaaa 50575990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 176 - 215
Target Start/End: Complemental strand, 5061419 - 5061380
Alignment:
Q  176 atatacattgtagatgtagtagacaaagaaaaatctcaat 215  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  5061419 atatacattgtagatgtagtagacaaaaacaaatctcaat 5061380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 29387900 - 29387946
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaa 202  Q
    ||||| ||||||||| ||||||||||||||||  |||||||||||||    
T  29387900 cccgtactgccgcacgggtcatatacattgtaagtgtagtagacaaa 29387946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 52957092 - 52957055
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgta 193  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  52957092 cccgtgctgccgcacgggtcatatacattgtagatgta 52957055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 1231768 - 1231725
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  1231768 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 1231725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 2951636 - 2951679
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  2951636 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 2951679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 4266340 - 4266297
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  4266340 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 4266297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 14009891 - 14009851
Alignment:
Q  162 ctgccgcacaggtcatatacattgtagatgtagtagacaaa 202  Q
    ||||||||| ||||||||| |||||| ||||||||||||||    
T  14009891 ctgccgcacgggtcatataaattgtaaatgtagtagacaaa 14009851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 18706773 - 18706816
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  18706773 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 18706816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 19764814 - 19764857
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  19764814 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 19764857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 19768425 - 19768382
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  19768425 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 19768382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 23482972 - 23483015
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  23482972 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 23483015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 294
Target Start/End: Complemental strand, 24168621 - 24168585
Alignment:
Q  258 ttcgaacctcagacaccacacttattcaccttaaaaa 294  Q
    |||||||| |||||||| |||||||||||||||||||    
T  24168621 ttcgaaccccagacaccccacttattcaccttaaaaa 24168585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 35614777 - 35614734
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  35614777 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 35614734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 38914017 - 38914060
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  38914017 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 38914060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 52036310 - 52036353
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  52036310 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 52036353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 19563 - 19345
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| |||||| || |||| |||||||||||||||||||||||||| | ||||||||||           | ||| |||||||| |||||||||| |||    
T  19563 cccgtgctgccgtacgggtcctatacattgtagatgtagtagacaaaaacaaatctcaatgcatattaaagataattaaatatgtggtcccaaatatatg 19464  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||    
T  19463 cagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttca-ttcttttgttaaaattata 19365  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||||||||||| ||||    
T  19364 tgtcaatgttatattattgg 19345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 156 - 365
Target Start/End: Complemental strand, 46490 - 46272
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  46490 cccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 46391  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  46390 cagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 46292  T
Q  346 tgtcaatgttatattcttgg 365  Q
    ||||||| ||||||| ||||    
T  46291 tgtcaatattatattattgg 46272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 113; Significance: 4e-57; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 156 - 365
Target Start/End: Original strand, 149063 - 149281
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||| ||||||||| ||||||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  149063 cccgtgctgccgcacgggtcatataaattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 149162  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtttgttacttcatttcttttgttaaaattata 345  Q
    ||||||||| ||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  149163 cagatgttggaattcgaacatcaaacacaacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttca-ttcttttgttaaaattata 149261  T
Q  346 tgtcaatgttatattcttgg 365  Q
    |||||| |||||||| ||||    
T  149262 tgtcaacgttatattattgg 149281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 149318 - 149361
Alignment:
Q  316 tgttacttcatttcttttgttaaaattatatgtcaatgttatatt 360  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  149318 tgttacttcatt-cttttgtaaaaattatatgttaatgttatatt 149361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 156 - 304
Target Start/End: Original strand, 6074 - 6232
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||||| ||||||||| | | ||||||||           |||||||||||||| ||| |||||| |||    
T  6074 cccgtgctgccgcacgggtcatatacattgtagatgttgtagacaaaaacatatctcaatgcatatcaaagagaatgaaatatgtggtctcaaatatatg 6173  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttt 304  Q
    ||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  6174 cagatgttggaattcgaacctcaaacaccacacttattcatcttaaaaatattaatttt 6232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 156 - 304
Target Start/End: Original strand, 6084 - 6242
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| ||||||||||||||||||||| ||||||||| | | ||||||||           |||||||||||||| ||| |||||| |||    
T  6084 cccgtgctgccgcacgggtcatatacattgtagatgttgtagacaaaaacatatctcaatgcatatcaaagagaatgaaatatgtggtctcaaatatatg 6183  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttt 304  Q
    ||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  6184 cagatgttggaattcgaacctcaaacaccacacttattcatcttaaaaatattaatttt 6242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0836 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 156 - 285
Target Start/End: Original strand, 5291 - 5430
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaagaaaaatctcaatc----------agaatgaaatatgtagtcccaaatacatg 245  Q
    ||||| ||||||||| || |||||||||||||||| || |||||||| | ||||||||||           |||||||||||||| |||||||||| |||    
T  5291 cccgtgctgccgcacgggacatatacattgtagatataatagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatg 5390  T
Q  246 cagatgttgaaattcgaacctcagacaccacacttattca 285  Q
    ||||||||| ||||||||||||||||||||| ||||||||    
T  5391 cagatgttggaattcgaacctcagacaccacgcttattca 5430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 1133 - 1087
Alignment:
Q  156 cccgttctgccgcacaggtcatatacattgtagatgtagtagacaaa 202  Q
    ||||| ||||||||| ||||||||||||||||  |||||||||||||    
T  1133 cccgtgctgccgcacgggtcatatacattgtaagtgtagtagacaaa 1087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University