View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17569_high_22 (Length: 341)

Name: NF17569_high_22
Description: NF17569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17569_high_22
NF17569_high_22
[»] chr8 (35 HSPs)
chr8 (11-151)||(30026898-30027037)
chr8 (14-151)||(14600719-14600855)
chr8 (11-109)||(9501602-9501701)
chr8 (12-99)||(31308171-31308258)
chr8 (11-83)||(7579873-7579945)
chr8 (12-149)||(10147920-10148057)
chr8 (11-147)||(24791186-24791321)
chr8 (11-147)||(37612629-37612764)
chr8 (14-96)||(39067710-39067792)
chr8 (11-96)||(2234488-2234573)
chr8 (12-109)||(41361745-41361842)
chr8 (13-151)||(11161854-11161991)
chr8 (14-109)||(10338843-10338938)
chr8 (12-107)||(37128505-37128600)
chr8 (11-151)||(2025227-2025366)
chr8 (11-96)||(12329652-12329738)
chr8 (11-96)||(31202484-31202569)
chr8 (11-147)||(1810238-1810372)
chr8 (11-147)||(31407766-31407901)
chr8 (11-151)||(24699802-24699943)
chr8 (11-103)||(4757184-4757276)
chr8 (11-109)||(23971114-23971210)
chr8 (11-68)||(3204774-3204831)
chr8 (18-151)||(10334146-10334279)
chr8 (16-99)||(32778973-32779057)
chr8 (11-86)||(22787528-22787603)
chr8 (10-99)||(2968554-2968644)
chr8 (18-96)||(15288823-15288901)
chr8 (18-96)||(15469192-15469270)
chr8 (20-96)||(13570753-13570829)
chr8 (11-109)||(1039912-1040009)
chr8 (10-47)||(30039354-30039391)
chr8 (13-60)||(13576207-13576254)
chr8 (11-99)||(28297124-28297214)
chr8 (14-63)||(42260994-42261043)
[»] scaffold0312 (1 HSPs)
scaffold0312 (11-151)||(6109-6248)
[»] chr1 (44 HSPs)
chr1 (11-151)||(424301-424440)
chr1 (11-151)||(27534671-27534810)
chr1 (10-151)||(17347571-17347709)
chr1 (11-109)||(42490906-42491004)
chr1 (14-145)||(12871599-12871729)
chr1 (11-102)||(51418034-51418124)
chr1 (11-143)||(32784088-32784219)
chr1 (11-107)||(37822355-37822451)
chr1 (11-109)||(3232801-3232899)
chr1 (11-147)||(29205261-29205396)
chr1 (11-109)||(44517160-44517258)
chr1 (12-109)||(4882370-4882467)
chr1 (11-99)||(10627023-10627111)
chr1 (11-151)||(14265256-14265395)
chr1 (11-109)||(13488546-13488644)
chr1 (13-95)||(29726608-29726690)
chr1 (14-99)||(45193639-45193725)
chr1 (16-147)||(28678145-28678275)
chr1 (14-145)||(33487043-33487173)
chr1 (11-145)||(7995570-7995703)
chr1 (11-79)||(15391262-15391330)
chr1 (11-109)||(42276369-42276466)
chr1 (19-96)||(18343640-18343717)
chr1 (14-93)||(45750507-45750586)
chr1 (12-77)||(20411618-20411683)
chr1 (11-69)||(15791285-15791343)
chr1 (16-93)||(28399336-28399414)
chr1 (13-54)||(50107926-50107967)
chr1 (21-99)||(9298434-9298513)
chr1 (10-138)||(33125814-33125941)
chr1 (11-67)||(33939023-33939081)
chr1 (18-63)||(30678315-30678359)
chr1 (15-59)||(38783131-38783175)
chr1 (21-96)||(4871046-4871121)
chr1 (14-56)||(45425485-45425527)
chr1 (14-63)||(32301398-32301447)
chr1 (10-42)||(47551177-47551209)
chr1 (29-99)||(32878730-32878798)
chr1 (21-59)||(34335108-34335146)
chr1 (18-63)||(13999025-13999070)
chr1 (14-59)||(29551762-29551807)
chr1 (21-57)||(29999914-29999950)
chr1 (21-57)||(34899046-34899082)
chr1 (21-57)||(40948382-40948418)
[»] chr5 (43 HSPs)
chr5 (11-150)||(17331301-17331439)
chr5 (11-151)||(6635221-6635361)
chr5 (10-109)||(17687218-17687317)
chr5 (14-139)||(34431044-34431168)
chr5 (11-138)||(17699538-17699664)
chr5 (11-96)||(33164478-33164563)
chr5 (14-143)||(29097769-29097897)
chr5 (11-138)||(42609129-42609255)
chr5 (11-151)||(17096249-17096391)
chr5 (14-109)||(27241077-27241172)
chr5 (11-94)||(28040657-28040740)
chr5 (11-93)||(39179838-39179920)
chr5 (11-93)||(42396522-42396604)
chr5 (10-99)||(178115-178204)
chr5 (12-105)||(3740375-3740467)
chr5 (12-147)||(6281020-6281154)
chr5 (11-145)||(32347724-32347858)
chr5 (10-98)||(18653806-18653894)
chr5 (10-92)||(12891706-12891788)
chr5 (22-147)||(43493848-43493972)
chr5 (11-109)||(3079315-3079413)
chr5 (12-99)||(6681887-6681972)
chr5 (16-96)||(12439649-12439729)
chr5 (14-75)||(20483233-20483294)
chr5 (11-96)||(23882126-23882211)
chr5 (19-92)||(39531422-39531494)
chr5 (11-69)||(2555360-2555418)
chr5 (11-76)||(11734829-11734892)
chr5 (21-62)||(14534959-14535000)
chr5 (16-94)||(25961953-25962033)
chr5 (14-63)||(585867-585916)
chr5 (14-63)||(25487667-25487716)
chr5 (11-66)||(7771831-7771887)
chr5 (15-63)||(26240692-26240740)
chr5 (52-99)||(981076-981123)
chr5 (14-57)||(35276001-35276044)
chr5 (14-79)||(7150859-7150925)
chr5 (13-78)||(12215178-12215244)
chr5 (14-59)||(32309226-32309271)
chr5 (14-69)||(26905651-26905707)
chr5 (21-63)||(374342-374384)
chr5 (14-63)||(11824847-11824896)
chr5 (14-63)||(17523535-17523583)
[»] chr6 (30 HSPs)
chr6 (11-145)||(15590089-15590222)
chr6 (11-151)||(6419868-6420007)
chr6 (11-109)||(19402818-19402916)
chr6 (12-151)||(12481381-12481519)
chr6 (11-151)||(2304820-2304959)
chr6 (10-93)||(4921890-4921973)
chr6 (11-151)||(23654222-23654361)
chr6 (10-109)||(4393783-4393882)
chr6 (12-147)||(21507819-21507953)
chr6 (11-147)||(8693667-8693805)
chr6 (11-147)||(14783181-14783316)
chr6 (12-92)||(31937431-31937510)
chr6 (11-99)||(23638128-23638216)
chr6 (11-93)||(6296259-6296341)
chr6 (11-93)||(6303069-6303151)
chr6 (221-298)||(30734223-30734300)
chr6 (12-69)||(29927105-29927162)
chr6 (14-64)||(31801243-31801293)
chr6 (11-78)||(31705209-31705276)
chr6 (14-63)||(8508202-8508251)
chr6 (16-92)||(35219920-35219995)
chr6 (14-69)||(20028711-20028766)
chr6 (10-87)||(2488173-2488250)
chr6 (20-63)||(9044099-9044142)
chr6 (14-47)||(7870247-7870280)
chr6 (29-78)||(15057725-15057774)
chr6 (21-57)||(16277253-16277289)
chr6 (19-63)||(16329085-16329129)
chr6 (12-56)||(27135179-27135223)
chr6 (21-57)||(28317535-28317571)
[»] chr2 (51 HSPs)
chr2 (11-147)||(43474138-43474273)
chr2 (10-151)||(27095677-27095817)
chr2 (11-151)||(25067824-25067963)
chr2 (11-138)||(33012062-33012188)
chr2 (11-145)||(38535315-38535448)
chr2 (14-109)||(44942298-44942393)
chr2 (11-147)||(12704663-12704798)
chr2 (11-96)||(9978679-9978764)
chr2 (11-96)||(32314468-32314553)
chr2 (11-145)||(20561142-20561275)
chr2 (10-147)||(15919850-15919985)
chr2 (14-147)||(31908829-31908961)
chr2 (11-109)||(28231107-28231205)
chr2 (11-99)||(4604317-4604405)
chr2 (14-90)||(10287019-10287095)
chr2 (13-96)||(13740672-13740755)
chr2 (11-151)||(22597107-22597246)
chr2 (14-96)||(34416774-34416856)
chr2 (11-96)||(35333531-35333616)
chr2 (12-96)||(4426669-4426753)
chr2 (14-147)||(5754264-5754396)
chr2 (11-109)||(4739342-4739440)
chr2 (13-150)||(32015193-32015333)
chr2 (11-146)||(36867985-36868119)
chr2 (11-151)||(13879017-13879163)
chr2 (11-151)||(14019142-14019288)
chr2 (11-99)||(17268136-17268222)
chr2 (11-138)||(28261898-28262029)
chr2 (11-92)||(7072958-7073039)
chr2 (11-145)||(11937868-11938002)
chr2 (13-70)||(12891131-12891188)
chr2 (16-99)||(17767566-17767650)
chr2 (12-147)||(18089407-18089537)
chr2 (21-95)||(9689993-9690067)
chr2 (16-96)||(6431402-6431483)
chr2 (18-63)||(17792533-17792578)
chr2 (11-87)||(4732106-4732181)
chr2 (14-86)||(34471002-34471074)
chr2 (21-63)||(20607332-20607374)
chr2 (14-63)||(17116415-17116464)
chr2 (14-67)||(41797649-41797702)
chr2 (14-63)||(11581141-11581190)
chr2 (14-61)||(20598648-20598695)
chr2 (40-102)||(34963105-34963167)
chr2 (14-63)||(15028323-15028372)
chr2 (22-97)||(11798537-11798613)
chr2 (14-60)||(12994224-12994270)
chr2 (14-63)||(44150053-44150101)
chr2 (21-57)||(19042574-19042610)
chr2 (21-57)||(39837265-39837301)
chr2 (14-69)||(40990271-40990327)
[»] chr7 (55 HSPs)
chr7 (11-151)||(28664922-28665061)
chr7 (11-94)||(32643040-32643123)
chr7 (11-147)||(21603439-21603573)
chr7 (11-145)||(36579322-36579455)
chr7 (14-102)||(39532988-39533076)
chr7 (14-109)||(42603782-42603877)
chr7 (11-147)||(45457566-45457701)
chr7 (11-143)||(9785297-9785428)
chr7 (14-96)||(10094467-10094549)
chr7 (10-109)||(14657830-14657931)
chr7 (11-96)||(11833045-11833130)
chr7 (11-96)||(15674622-15674707)
chr7 (10-99)||(24320232-24320321)
chr7 (11-145)||(46026039-46026172)
chr7 (14-109)||(2622605-2622700)
chr7 (11-147)||(41287933-41288069)
chr7 (11-109)||(1281147-1281245)
chr7 (11-145)||(21990639-21990773)
chr7 (11-96)||(5684391-5684476)
chr7 (11-96)||(5709441-5709526)
chr7 (11-138)||(17473733-17473859)
chr7 (11-138)||(17579355-17579481)
chr7 (20-109)||(42644689-42644778)
chr7 (13-96)||(32740779-32740862)
chr7 (11-96)||(9719983-9720069)
chr7 (11-109)||(43847083-43847181)
chr7 (11-87)||(3266423-3266499)
chr7 (14-147)||(10574357-10574489)
chr7 (11-145)||(17509214-17509346)
chr7 (11-145)||(17543868-17544000)
chr7 (10-109)||(21954827-21954927)
chr7 (11-151)||(45482036-45482175)
chr7 (10-99)||(4621376-4621465)
chr7 (14-145)||(48304406-48304538)
chr7 (11-147)||(6667371-6667506)
chr7 (10-143)||(22747517-22747648)
chr7 (11-64)||(26161038-26161091)
chr7 (12-109)||(27535469-27535568)
chr7 (11-67)||(36719562-36719620)
chr7 (13-99)||(39707312-39707399)
chr7 (21-63)||(6646610-6646652)
chr7 (14-63)||(39990187-39990236)
chr7 (10-96)||(9136983-9137070)
chr7 (23-92)||(29352275-29352345)
chr7 (22-63)||(17223163-17223204)
chr7 (14-69)||(33476665-33476721)
chr7 (13-63)||(37376043-37376093)
chr7 (14-63)||(14810664-14810712)
chr7 (14-63)||(14811282-14811330)
chr7 (14-63)||(15257659-15257707)
chr7 (14-63)||(15258277-15258325)
chr7 (13-61)||(10623861-10623909)
chr7 (14-42)||(37714558-37714586)
chr7 (117-145)||(40761567-40761595)
chr7 (34-74)||(40761659-40761699)
[»] chr4 (54 HSPs)
chr4 (11-151)||(29268787-29268926)
chr4 (11-147)||(43244391-43244526)
chr4 (14-151)||(24825621-24825757)
chr4 (11-98)||(30202062-30202149)
chr4 (12-151)||(6911652-6911790)
chr4 (10-145)||(44757051-44757185)
chr4 (10-98)||(5814371-5814459)
chr4 (11-109)||(7083826-7083924)
chr4 (11-99)||(6881979-6882067)
chr4 (11-137)||(20399913-20400038)
chr4 (14-109)||(7060337-7060432)
chr4 (14-109)||(26742476-26742571)
chr4 (11-96)||(13965586-13965671)
chr4 (11-96)||(43493297-43493382)
chr4 (13-96)||(12717129-12717213)
chr4 (14-96)||(22757120-22757202)
chr4 (11-93)||(50801246-50801328)
chr4 (11-96)||(25658193-25658278)
chr4 (11-92)||(26674402-26674483)
chr4 (11-96)||(38944158-38944242)
chr4 (11-144)||(394284-394416)
chr4 (18-109)||(626566-626655)
chr4 (11-143)||(8712510-8712641)
chr4 (11-146)||(11210323-11210457)
chr4 (11-96)||(13586250-13586336)
chr4 (11-109)||(20887766-20887863)
chr4 (11-96)||(36124359-36124442)
chr4 (11-96)||(39523435-39523520)
chr4 (11-87)||(8517466-8517542)
chr4 (14-107)||(24100154-24100249)
chr4 (11-145)||(24568723-24568856)
chr4 (11-75)||(45351080-45351144)
chr4 (11-75)||(45360559-45360623)
chr4 (11-102)||(7861216-7861306)
chr4 (11-96)||(19745415-19745501)
chr4 (11-96)||(19794305-19794391)
chr4 (11-93)||(27394859-27394941)
chr4 (11-109)||(51152138-51152235)
chr4 (18-83)||(39837634-39837699)
chr4 (11-87)||(24611809-24611885)
chr4 (10-96)||(22049413-22049500)
chr4 (11-86)||(29922873-29922948)
chr4 (19-105)||(478030-478116)
chr4 (14-93)||(2447829-2447908)
chr4 (29-99)||(3159065-3159136)
chr4 (30-143)||(31521962-31522074)
chr4 (10-59)||(28837128-28837177)
chr4 (12-65)||(32616836-32616889)
chr4 (10-87)||(27090759-27090836)
chr4 (11-93)||(42197581-42197665)
chr4 (14-53)||(22621502-22621541)
chr4 (29-77)||(29235294-29235343)
chr4 (13-54)||(51958420-51958461)
chr4 (22-62)||(1551568-1551608)
[»] chr3 (45 HSPs)
chr3 (11-151)||(36691817-36691956)
chr3 (12-151)||(48652459-48652597)
chr3 (12-109)||(41868313-41868411)
chr3 (11-150)||(11819056-11819194)
chr3 (11-109)||(35174717-35174815)
chr3 (15-109)||(54239040-54239134)
chr3 (11-138)||(32080772-32080898)
chr3 (11-96)||(38527289-38527374)
chr3 (12-109)||(49628106-49628203)
chr3 (11-109)||(36624712-36624810)
chr3 (11-96)||(14585488-14585573)
chr3 (14-145)||(34960879-34961009)
chr3 (12-147)||(48400875-48401009)
chr3 (10-101)||(2147747-2147839)
chr3 (11-145)||(31462764-31462897)
chr3 (15-82)||(34103739-34103806)
chr3 (11-78)||(40013290-40013357)
chr3 (18-96)||(22484991-22485069)
chr3 (11-109)||(24483696-24483794)
chr3 (11-93)||(31270355-31270437)
chr3 (11-109)||(55090601-55090699)
chr3 (11-153)||(19645191-19645332)
chr3 (16-147)||(53155453-53155583)
chr3 (12-96)||(3456969-3457053)
chr3 (15-145)||(13701994-13702123)
chr3 (12-96)||(33637429-33637513)
chr3 (11-93)||(40883886-40883968)
chr3 (12-151)||(1074913-1075050)
chr3 (10-109)||(39429516-39429617)
chr3 (14-87)||(39610247-39610320)
chr3 (10-97)||(106052-106140)
chr3 (10-78)||(3312487-3312555)
chr3 (11-109)||(4206529-4206627)
chr3 (14-63)||(4219239-4219288)
chr3 (12-78)||(19861298-19861365)
chr3 (11-145)||(30156299-30156432)
chr3 (14-69)||(5327497-5327553)
chr3 (14-96)||(27189414-27189497)
chr3 (12-66)||(55454922-55454976)
chr3 (30-96)||(4817867-4817933)
chr3 (18-63)||(46732770-46732815)
chr3 (11-55)||(53402688-53402732)
chr3 (16-49)||(47733900-47733933)
chr3 (16-60)||(3961786-3961830)
chr3 (21-57)||(42398542-42398578)
[»] scaffold1379 (2 HSPs)
scaffold1379 (10-96)||(1095-1181)
scaffold1379 (11-96)||(1-86)
[»] scaffold0536 (1 HSPs)
scaffold0536 (14-151)||(2872-3010)
[»] scaffold0321 (1 HSPs)
scaffold0321 (14-109)||(7137-7232)
[»] scaffold0056 (1 HSPs)
scaffold0056 (22-109)||(74177-74264)
[»] scaffold0155 (1 HSPs)
scaffold0155 (12-138)||(35067-35194)
[»] scaffold0001 (1 HSPs)
scaffold0001 (12-92)||(404269-404350)
[»] scaffold1350 (1 HSPs)
scaffold1350 (11-87)||(1609-1685)
[»] scaffold0121 (1 HSPs)
scaffold0121 (11-93)||(13255-13337)
[»] scaffold0432 (1 HSPs)
scaffold0432 (21-102)||(2438-2518)
[»] scaffold0294 (1 HSPs)
scaffold0294 (14-87)||(4080-4153)
[»] scaffold0038 (1 HSPs)
scaffold0038 (21-57)||(108641-108677)
[»] scaffold0007 (1 HSPs)
scaffold0007 (18-69)||(202067-202119)


Alignment Details
Target: chr8 (Bit Score: 87; Significance: 1e-41; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 11 - 151
Target Start/End: Original strand, 30026898 - 30027037
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||     
T  30026898 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaagaaaaaacaactcggatgggtga- 30026996  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctctaacaag 151  Q
          |||||||| ||||||||||||| |||||| |||||    
T  30026997 tttttgggtcaaaaatgaccctaaatcacccctctgacaag 30027037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 14600719 - 14600855
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgannnn 113  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||| |||||||||||||||||||| ||||| |||        
T  14600719 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcagttattcaattaggatagaagaaaaaacaactcggatggatga-ttt 14600817  T
Q  114 nnnggtcaaaattgaccctaaatcatccctctaacaag 151  Q
       |||||||||||||||||||||| | ||||||||||    
T  14600818 ttgggtcaaaattgaccctaaatcacctctctaacaag 14600855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 9501701 - 9501602
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaa-gaaaaaacaactcagatgggtga 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||| |||||||||| ||||||||||||    
T  9501701 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaaacaattcagatgggtga 9501602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 99
Target Start/End: Complemental strand, 31308258 - 31308171
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactc 99  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||| |||||||| |||||||||||    
T  31308258 agagacgacgaaatcacaaaaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactc 31308171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 7579873 - 7579945
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagata 83  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  7579873 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaagata 7579945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 12 - 149
Target Start/End: Complemental strand, 10148057 - 10147920
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaa-aaaacaactcagatgggtgan 110  Q
    |||||||||  |||| |||||||||||||||| |||| |||||||||||||||||||| |||||||| |||||||||| |||||||||| || ||||||     
T  10148057 agagacgacataatctcaaaaacaaacgaaaggaaacagaaaatatgtgaaatcacttattcaattaggatagaagaaaaaaacaactcggaggggtga- 10147959  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctctaaca 149  Q
          |||||||||||||||||||||| ||||||||||    
T  10147958 ttattgggtcaaaattgaccctaaatcacccctctaaca 10147920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 147
Target Start/End: Original strand, 24791186 - 24791321
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| || ||||| |||| ||| |||||||| || ||||| |||     
T  24791186 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgttaaatcacttattgaattaggatataaggaaaaacaattcggatggatga- 24791284  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctctaa 147  Q
          |||||||||||||| ||||||| ||||||||    
T  24791285 tttttgggtcaaaattgaccataaatcacccctctaa 24791321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 147
Target Start/End: Complemental strand, 37612764 - 37612629
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||||||||||||| ||||| || |||||||| ||||| || || || ||||||     
T  37612764 cagagacgacgaaatcacaaaaacaaacgaaagaaaataaaaaatatgtgaaatcacttattcaactaggatagaaggaaaaaaaattcggaggggtga- 37612666  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctctaa 147  Q
          |||||||||||||||||||||| ||||||||    
T  37612665 tttttgggtcaaaattgaccctaaatcacccctctaa 37612629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 39067710 - 39067792
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| ||||||||    
T  39067710 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattaaattaggatagaaggaaaaacaa 39067792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 2234488 - 2234573
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||| || |||||||| ||||||||    
T  2234488 cagagacgacgaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaactaggatagaaggaaaaacaa 2234573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 41361842 - 41361745
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| | |||||| |||||||| || || ||||||    
T  41361842 agagacgaccaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattacggtagaaggaaaaacaaatcggaggggtga 41361745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 151
Target Start/End: Complemental strand, 11161991 - 11161854
Alignment:
Q  13 gagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgannn 112  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||| |||| ||  ||||||||||   | ||||||       
T  11161991 gagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaagatgtgaaatgacttattcaattaggatataaagaaaaacaacttgaaggggtga-tt 11161893  T
Q  113 nnnnggtcaaaattgaccctaaatcatccctctaacaag 151  Q
        |||||||||||||||||||| | ||||||||||||    
T  11161892 tttgggtcaaaattgaccctaaattacccctctaacaag 11161854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 10338843 - 10338938
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||| |||| ||| |||||||| || || ||||||    
T  10338843 agacgacgaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattcggaggggtga 10338938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 37128505 - 37128600
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggt 107  Q
    |||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||| ||||| || |||||||| |||||||| || |||||||    
T  37128505 agagacgacgaaattacaaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggatgggt 37128600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 11 - 151
Target Start/End: Original strand, 2025227 - 2025366
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    ||||||||||||||||||||||| |||||||| ||||| ||||| |||||||||||||| ||||||||  ||| ||| ||||||||||  || ||||||     
T  2025227 cagagacgacgaaatcacaaaaataaacgaaataaaacagaaaacatgtgaaatcacttattcaattagaataaaaggaaaaacaacttggaagggtga- 2025325  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctctaacaag 151  Q
          |||||||||||||| ||||||| ||||||||||||    
T  2025326 ttttttggtcaaaattgaccataaatcacccctctaacaag 2025366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 12329738 - 12329652
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaa-cgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||| |||| ||| ||||||||    
T  12329738 cagagacgacgaaatcacaaaaacaaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaa 12329652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 31202569 - 31202484
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||  ||||||  ||||||||    
T  31202569 cagagacgacgaaatcacaaaaacaaacgaaacaaaacagaaaatatgtgaaatcacttattcaattataatagaaagaaaaacaa 31202484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 147
Target Start/End: Original strand, 1810238 - 1810372
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||| |||| |||||||||||||||||||||||||| | ||||| |||||||||||||| || ||||| |||||||||||||| || || || ||||||     
T  1810238 cagatacgaggaaatcacaaaaacaaacgaaagaaatcagaaaaaatgtgaaatcacttattgaattaggatagaagaaaaaa-aaatcggaggggtga- 1810335  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctctaa 147  Q
          |||||||||||||||||||||| ||||||||    
T  1810336 tttttgggtcaaaattgaccctaaatcacccctctaa 1810372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 147
Target Start/End: Original strand, 31407766 - 31407901
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    ||||||||||||||||| ||||||||||||||||||||  |||||||||||||||| || ||||| || |||||||| |||||||| || ||  | |||     
T  31407766 cagagacgacgaaatcataaaaacaaacgaaagaaaacaaaaaatatgtgaaatcatttattcaactatgatagaaggaaaaacaattcggagagatga- 31407864  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctctaa 147  Q
          |||||||||||||||||||||| ||||||||    
T  31407865 tttttgggtcaaaattgaccctaaatcacccctctaa 31407901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 151
Target Start/End: Complemental strand, 24699943 - 24699802
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaag--aaaaaacaactcagatgggtg 108  Q
    ||||||||||||||| |||||| |||| |||||||||| |||||||||||||||||||| || ||||| |||| |||  |||||||| ||| ||||||||    
T  24699943 cagagacgacgaaattacaaaagcaaatgaaagaaaacagaaaatatgtgaaatcacttatttaattaggatataagaaaaaaaacatctcggatgggtg 24699844  T
Q  109 annnnnnnggtcaaaattgaccctaaatcatccctctaacaag 151  Q
    |       |||||||||||||||||||||| || ||| |||||    
T  24699843 a-tttttgggtcaaaattgaccctaaatcacccttctgacaag 24699802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 4757276 - 4757184
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagat 103  Q
    ||||||||||||||||  ||||| ||| |||||||||| ||||||||||||||||| || || ||||| |||||||| |||||||||||||||    
T  4757276 cagagacgacgaaatcttaaaaagaaatgaaagaaaacagaaaatatgtgaaatcatttatttaattatgatagaaggaaaaacaactcagat 4757184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 23971114 - 23971210
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    |||||||||| ||||||||||  |||||||||||||||  ||||||||||||||||||| ||||||||  ||||||| ||||||||||| |||| ||||    
T  23971114 cagagacgacaaaatcacaaa--caaacgaaagaaaacataaaatatgtgaaatcacttattcaattagaatagaaggaaaaacaactcggatgagtga 23971210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 3204774 - 3204831
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcact 68  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  3204774 cagagacgacgaaatcacataaacaaacgaaagaaaacagaaaatatgtgaaatcact 3204831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 10334279 - 10334146
Alignment:
Q  18 gacgaaatcacaaaaacaaacgaaagaaaactgaaaa-tatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgannnnnnn 116  Q
    ||||||||||| ||||||||| |||||||| |||||| ||| |||| |||||| || ||||| |||||||| |||||||||||| ||| ||||           
T  10334279 gacgaaatcactaaaacaaacaaaagaaaattgaaaaatatatgaactcacttatttaattaggatagaaggaaaaacaactcatatgagtga-tttttg 10334181  T
Q  117 ggtcaaaattgaccctaaatcatccctctaacaag 151  Q
    | |||||||||||||||||||||| ||||||||||    
T  10334180 gatcaaaattgaccctaaatcatctctctaacaag 10334146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 32778973 - 32779057
Alignment:
Q  16 acgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgt-gaaatcacttgttcaattaagatagaagaaaaaacaactc 99  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||| ||| || ||||| |||| ||| |||||||||||    
T  32778973 acgacgaaatcacaaaaataaacgaaagaaaactgaaaatatgtggaaatctcttatttaattatgatataaggaaaaacaactc 32779057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 22787603 - 22787528
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaa 86  Q
    |||| |||||| |||||||||||||||||||||||||| |||||||||| ||||||||| ||||| || |||||||    
T  22787603 cagaaacgacggaatcacaaaaacaaacgaaagaaaacagaaaatatgttaaatcacttattcaactaggatagaa 22787528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 2968644 - 2968554
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtg-aaatcacttgttcaattaagatagaagaaaaaacaactc 99  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||| || |||||  ||| ||  |||||||||||    
T  2968644 gcagagacgacaaaatcacaaaaacaaacgaaagaaaactaaaaatatgtgaaaatcacttatttaattagaatataaagaaaaacaactc 2968554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 15288823 - 15288901
Alignment:
Q  18 gacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||| | || ||||| |||||||  ||||||||    
T  15288823 gacgaaatcacaaaaacaaacgaaagaaaacagaaaataagtgaaatcacgtatttaattaggatagaaagaaaaacaa 15288901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 15469192 - 15469270
Alignment:
Q  18 gacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||| | || ||||| |||||||  ||||||||    
T  15469192 gacgaaatcacaaaaacaaacgaaagaaaacagaaaataagtgaaatcacgtatttaattaggatagaaagaaaaacaa 15469270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 13570753 - 13570829
Alignment:
Q  20 cgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    ||||||||||||||||||||||| ||||  |||||||||||||||||||| || ||||| |||||||  ||||||||    
T  13570753 cgaaatcacaaaaacaaacgaaaaaaaatagaaaatatgtgaaatcacttatttaattaggatagaatgaaaaacaa 13570829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 1039912 - 1040009
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    |||||||||| ||||||||||| |||| |||||||| | |||||||||||||||||||| || |||||  ||||||| |||| ||| || |||||||||    
T  1039912 cagagacgacaaaatcacaaaa-caaatgaaagaaagcagaaaatatgtgaaatcacttattgaattagaatagaaggaaaaccaattcggatgggtga 1040009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 47
Target Start/End: Original strand, 30039354 - 30039391
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaa 47  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30039354 gcagagacgacgaaatcacaaaaacaaacgaaagaaaa 30039391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 13576207 - 13576254
Alignment:
Q  13 gagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtg 60  Q
    |||||||| ||||||| |||| ||||||||||||||||||||||||||    
T  13576207 gagacgacaaaatcaccaaaataaacgaaagaaaactgaaaatatgtg 13576254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 28297124 - 28297214
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaa--ctgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactc 99  Q
    ||||||||||||||||||||||||| |||||||||||   | || |||| ||||||||||  ||||||||  | ||||| |||||||||||    
T  28297124 cagagacgacgaaatcacaaaaacagacgaaagaaaatggtaaatatatatgaaatcactaattcaattagaaaagaaggaaaaacaactc 28297214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 42261043 - 42260994
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 63  Q
    |||||| |||||||| ||||||||||||||||||   |||||||||||||    
T  42261043 agacgatgaaatcaccaaaacaaacgaaagaaaatcaaaaatatgtgaaa 42260994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 11 - 151
Target Start/End: Complemental strand, 6248 - 6109
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| ||||||||||| || ||||||     
T  6248 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggaggggtga- 6150  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctctaacaag 151  Q
          |||||||||||||||||||||| |||||| |||||    
T  6149 tttttgggtcaaaattgaccctaaatcacccctctgacaag 6109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 3e-39; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 11 - 151
Target Start/End: Original strand, 424301 - 424440
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| ||||||||||| || ||||||     
T  424301 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggaggggtga- 424399  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctctaacaag 151  Q
          |||||||||||||||||||||| |||||| |||||    
T  424400 tttttgggtcaaaattgaccctaaatcacccctctgacaag 424440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 11 - 151
Target Start/End: Complemental strand, 27534810 - 27534671
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||| |||||||| || || || |||     
T  27534810 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggagggatga- 27534712  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctctaacaag 151  Q
          ||||||||||||||||||||||||||||| |||||    
T  27534711 tttttgggtcaaaattgaccctaaatcatccctctgacaag 27534671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 151
Target Start/End: Complemental strand, 17347709 - 17347571
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    |||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||| |||  ||| |||||||||||||||||||| |||||||||    
T  17347709 gcagagacgacgaaatcacaaaaacaaa-gaaagaaaacagaaaagatgtgaaatcacttattcctttatgatagaagaaaaaacaactcggatgggtga 17347611  T
Q  110 nnnnnnnggtcaaaattgaccctaaatcatccctctaacaag 151  Q
           ||||||||||||||||||||||||| ||| |||||    
T  17347610 --tttttggtcaaaattgaccctaaatcatccatctgacaag 17347571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 42491004 - 42490906
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||  |||||||| || || ||||||    
T  42491004 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaagatatgtgaaatcacttattcaattaagatagaacgaaaaacaattcggaggggtga 42490906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 14 - 145
Target Start/End: Complemental strand, 12871729 - 12871599
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgannnn 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||| ||  ||||||||||| || ||||||        
T  12871729 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttattcgattaggatataatgaaaaacaactcggaggggtga-ttt 12871631  T
Q  114 nnnggtcaaaattgaccctaaatcatccctct 145  Q
       |||||||||||||||||||||| ||||||    
T  12871630 ttgggtcaaaattgaccctaaatcacccctct 12871599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 102
Target Start/End: Complemental strand, 51418124 - 51418034
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcaga 102  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| ||||||||||||||    
T  51418124 cagagacgacgaaattacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcactt-ttcaattaggatagaaggaaaaacaactcaga 51418034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 143
Target Start/End: Complemental strand, 32784219 - 32784088
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||| | |||||||| |||||||| || || ||||||     
T  32784219 cagagacgacgaaatcacaaaaacaaacaaaagaaaacagaaaatatgtgaaatcacttattcaataaggatagaaggaaaaacaattcggaggggtga- 32784121  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccct 143  Q
          |||||||||||||||||||||| ||||    
T  32784120 tttttgggtcaaaattgaccctaaatcacccct 32784088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 107
Target Start/End: Original strand, 37822355 - 37822451
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggt 107  Q
    ||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||| |||||||| |||||||| |||||||| ||||| ||||    
T  37822355 cagagacgacgaaatcacaaaaacaaatgaaagaaaatagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcagaagggt 37822451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 3232899 - 3232801
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||| |||||||| |||||||| || || ||||||    
T  3232899 cagaaacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcatttattcaattaggatagaaggaaaaacaattcggaggggtga 3232801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 147
Target Start/End: Complemental strand, 29205396 - 29205261
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||| |||||||| |||||||| |||||||| ||  | ||||||     
T  29205396 cagagacgacgaaatcacaaaaacaaacaaaagaaaacagaaaatatatgaaatcacttattcaattatgatagaaggaaaaacaattccaaggggtga- 29205298  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctctaa 147  Q
          |||||||||||||||||||||| || |||||    
T  29205297 tttttgggtcaaaattgaccctaaatcacccgtctaa 29205261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 44517258 - 44517160
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| || ||||| |||||||| |||||||| || || ||||||    
T  44517258 cagagacgacgaaatcacaaaaacaaacgaaagaaagcagaaaatatgtgaaatcacttattgaattaggatagaaggaaaaacaattcggaagggtga 44517160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 4882370 - 4882467
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||| ||  |||||||| || || ||||||    
T  4882370 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatataatgaaaaacaaatcggaggggtga 4882467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 10627111 - 10627023
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactc 99  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||| |||| ||  |||||||||||    
T  10627111 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaattacttattcaattaggatataaagaaaaacaactc 10627023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 151
Target Start/End: Complemental strand, 14265395 - 14265256
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    ||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||| || ||||| |||||||| ||||||| ||| || ||||||     
T  14265395 cagagacgacgaaatcacaaaaacatacgtaagaaaacagaaaatatgtgaaatcacttatttaattaggatagaaggaaaaacagctcggaggggtgat 14265296  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctctaacaag 151  Q
           ||||||||||||||||||||| || ||| |||||    
T  14265295 tttttt-gtcaaaattgaccctaaatcacccatctgacaag 14265256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 13488546 - 13488644
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    |||||||| ||||||||||||||||||||||||||||  |||||||||| ||||||||| |||||||||| | |||| |||||||| || |||||||||    
T  13488546 cagagacggcgaaatcacaaaaacaaacgaaagaaaatagaaaatatgtaaaatcacttattcaattaaggtggaaggaaaaacaaatcggatgggtga 13488644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 29726608 - 29726690
Alignment:
Q  13 gagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaaca 95  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||| |||| ||| |||||||    
T  29726608 gagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcgattaggatataaggaaaaaca 29726690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 45193639 - 45193725
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaa-gaaaaaacaactc 99  Q
    ||||||| |||||||||||||||||||||| |||| |||||||||||||||||||| |||||||| ||||||| |||||||||||||    
T  45193639 agacgacaaaatcacaaaaacaaacgaaaggaaacggaaaatatgtgaaatcacttattcaattaggatagaaggaaaaaacaactc 45193725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 147
Target Start/End: Original strand, 28678145 - 28678275
Alignment:
Q  16 acgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgannnnnn 115  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||| |||||||| |||||||  |||||||| || || | ||||          
T  28678145 acgacgaaatcacaaaaacaaacgaaagaaaatataaaatatgtgaaatcacttattcaattatgatagaacgaaaaacaattcggacgagtga-ttttt 28678243  T
Q  116 nggtcaaaattgaccctaaatcatccctctaa 147  Q
     |||||||||||||||||||||| ||||||||    
T  28678244 gggtcaaaattgaccctaaatcacccctctaa 28678275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 145
Target Start/End: Original strand, 33487043 - 33487173
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgannnn 113  Q
    ||||||||||||||||||||||||||||||||| |  ||||||| ||||||||| | |||||||| |||||||| |||||||| || || ||||||        
T  33487043 agacgacgaaatcacaaaaacaaacgaaagaaagcataaaatatatgaaatcacatattcaattaggatagaaggaaaaacaattcggaggggtga-ttt 33487141  T
Q  114 nnnggtcaaaattgaccctaaatcatccctct 145  Q
       |||||||||||||||||||||| ||||||    
T  33487142 ttgggtcaaaattgaccctaaatcacccctct 33487173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 7995570 - 7995703
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||||| |||||||||| ||| | |||||||| |||||||||||||||||||| |||||||| |||||||| |||||||| || ||  |||||     
T  7995570 cagagacgacgatatcacaaaaaaaaaaggaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggagaggtga- 7995668  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctct 145  Q
          |||||||||||||||||||||| ||||||    
T  7995669 tttttgggtcaaaattgaccctaaatcacccctct 7995703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 15391262 - 15391330
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaa 79  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||    
T  15391262 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaacatgtgaaatcacttattcaattaa 15391330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 42276466 - 42276369
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    ||||||||||| |||||||||  ||||||||||||||||||||||||||||||||| || || ||||| ||||||||||||||||| || || ||||||    
T  42276466 cagagacgacgtaatcacaaat-caaacgaaagaaaactgaaaatatgtgaaatcagttatttaattatgatagaagaaaaaacaattcggaggggtga 42276369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 18343717 - 18343640
Alignment:
Q  19 acgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||  || ||||||| |||||| ||||||||    
T  18343717 acgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcactcatttaattaaggtagaaggaaaaacaa 18343640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 45750586 - 45750507
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaa 93  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||| |||| |||||||| |||| ||| |||||    
T  45750586 agacgacgaaatcacaaaaacaaacgaaagaaaaccaaaaatatgtgaaataacttattcaattaggataaaaggaaaaa 45750507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 20411683 - 20411618
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaatt 77  Q
    |||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  20411683 agagacgatgaaatcccaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaatt 20411618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 15791285 - 15791343
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcactt 69  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||    
T  15791285 cagagacgatgaaatcacaaaaacaaacgaaagaaaacagaaaatatgttaaatcactt 15791343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 28399336 - 28399414
Alignment:
Q  16 acgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtg-aaatcacttgttcaattaagatagaagaaaaaa 93  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||| || ||||| |||| ||| |||||    
T  28399336 acgacgaaatcacaaaaacaaacgaaagaaaactaaaaatatgtgaaaatcacttatttaattatgatataaggaaaaa 28399414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 50107926 - 50107967
Alignment:
Q  13 gagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaa 54  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  50107926 gagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaa 50107967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 9298434 - 9298513
Alignment:
Q  21 gaaatcacaaaaacaaacgaaagaaaactgaaaatatgt-gaaatcacttgttcaattaagatagaagaaaaaacaactc 99  Q
    ||||||||||||||||||||||||||||| |||||| || ||||||| || || || || |||||||| |||||||||||    
T  9298434 gaaatcacaaaaacaaacgaaagaaaacttaaaatacgtggaaatcaattatttaactaggatagaaggaaaaacaactc 9298513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 138
Target Start/End: Original strand, 33125814 - 33125941
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgt-gaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtg 108  Q
    |||||||| |||||||||||||||||||  |||||| ||| ||| ||||| |||||||||| ||||||||  | ||||| |||||||| | ||||| |||    
T  33125814 gcagagacaacgaaatcacaaaaacaaagaaaagaatactaaaattatgtggaaatcacttattcaattataaaagaaggaaaaacaatttagatgagtg 33125913  T
Q  109 annnnnnnggtcaaaattgaccctaaatca 138  Q
    |       ||||||||||||||||||||||    
T  33125914 a--ttttgggtcaaaattgaccctaaatca 33125941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 33939023 - 33939081
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaa--tatgtgaaatcac 67  Q
    |||||| ||||||||||||||||||||||||||||||| |||||  |||||||||||||    
T  33939023 cagagatgacgaaatcacaaaaacaaacgaaagaaaacagaaaatttatgtgaaatcac 33939081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 30678359 - 30678315
Alignment:
Q  18 gacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 63  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  30678359 gacgaaatcacaaaa-caaacgaaagaaaactgaaaatatgtgaaa 30678315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 38783175 - 38783131
Alignment:
Q  15 gacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgt 59  Q
    |||||||||||||||||||| |||||| |||||||||||||||||    
T  38783175 gacgacgaaatcacaaaaacgaacgaaggaaaactgaaaatatgt 38783131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 4871046 - 4871121
Alignment:
Q  21 gaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    ||||||||||||||||||| || ||||  ||||||||||||||| |||| ||||||||  ||| ||| ||||||||    
T  4871046 gaaatcacaaaaacaaacggaaaaaaatagaaaatatgtgaaataacttattcaattagaataaaaggaaaaacaa 4871121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 45425485 - 45425527
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaata 56  Q
    ||||||||||||||||||||| |||||||||||| ||||||||    
T  45425485 agacgacgaaatcacaaaaactaacgaaagaaaattgaaaata 45425527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 32301447 - 32301398
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 63  Q
    |||||| ||||||||||||||||||||||||| ||| || ||||||||||    
T  32301447 agacgatgaaatcacaaaaacaaacgaaagaatactaaagatatgtgaaa 32301398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 42
Target Start/End: Complemental strand, 47551209 - 47551177
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaa 42  Q
    |||||||||||||||||||||||||||||||||    
T  47551209 gcagagacgacgaaatcacaaaaacaaacgaaa 47551177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 32878798 - 32878730
Alignment:
Q  29 aaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactc 99  Q
    ||||||||||||||||||| || |||||||||||| ||||| || ||||| |||||| | |||||||||||    
T  32878798 aaaaacaaacgaaagaaaattg-aaatatgtgaaa-cacttatttaattaggatagagggaaaaacaactc 32878730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 34335108 - 34335146
Alignment:
Q  21 gaaatcacaaaaacaaacgaaagaaaactgaaaatatgt 59  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  34335108 gaaatcacaaaaacaaacgaaataaaattgaaaatatgt 34335146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 13999070 - 13999025
Alignment:
Q  18 gacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 63  Q
    |||| ||||| |||||||||||||| || |||||||||||||||||    
T  13999070 gacgtaatcataaaaacaaacgaaataatactgaaaatatgtgaaa 13999025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 29551762 - 29551807
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgt 59  Q
    ||||| |||||||||||||| |||| ||||| ||||||||||||||    
T  29551762 agacgccgaaatcacaaaaataaaccaaagataactgaaaatatgt 29551807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 29999950 - 29999914
Alignment:
Q  21 gaaatcacaaaaacaaacgaaagaaaactgaaaatat 57  Q
    ||||||||||||||||||||||||||| | |||||||    
T  29999950 gaaatcacaaaaacaaacgaaagaaaaattaaaatat 29999914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 34899082 - 34899046
Alignment:
Q  21 gaaatcacaaaaacaaacgaaagaaaactgaaaatat 57  Q
    |||||||||||| || |||||||||||||||||||||    
T  34899082 gaaatcacaaaatcatacgaaagaaaactgaaaatat 34899046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 40948382 - 40948418
Alignment:
Q  21 gaaatcacaaaaacaaacgaaagaaaactgaaaatat 57  Q
    ||||||||||||||||||||||||||| | |||||||    
T  40948382 gaaatcacaaaaacaaacgaaagaaaaattaaaatat 40948418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 1e-38; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 17331439 - 17331301
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||| || || ||||||     
T  17331439 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaagatagaaggaaaaacaaatcggaggggtga- 17331341  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctctaacaa 150  Q
          |||||||||||||||||||||| |||||| ||||    
T  17331340 tttttgggtcaaaattgaccctaaatcacccctctgacaa 17331301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 11 - 151
Target Start/End: Complemental strand, 6635361 - 6635221
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcaga-tgggtga 109  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||| |||||||| ||||||||||||||  ||||||    
T  6635361 cagagacgacgaaatcacaaaaacaaactaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaaggaaaaacaactcagagagggtga 6635262  T
Q  110 nnnnnnnggtcaaaattgaccctaaatcatccctctaacaag 151  Q
           ||||||||||| ||||||||||||||||| |||||    
T  6635261 -tttttgggtcaaaattggccctaaatcatccctctgacaag 6635221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 17687317 - 17687218
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||| ||| |||||    
T  17687317 gcagagacaacgaaatcacaaaaacaaacaaaagaaaactgaaaatatgtgaaataacttattcaattaagatagaaggaaaaacaactcggattggtga 17687218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 34431168 - 34431044
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgannnn 113  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||| ||  ||||||||        
T  34431168 agacgacgaaatcacaaaatcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaaatagaagaaaaaacaattcgaatgggtga-ttt 34431070  T
Q  114 nnnggtcaaaattgaccctaaatcat 139  Q
       |||||||||||||||||||||||    
T  34431069 ttgggtcaaaattgaccctaaatcat 34431044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 138
Target Start/End: Complemental strand, 17699664 - 17699538
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| |||||||| |||||||| || || ||||||     
T  17699664 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaagatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggaggggtga- 17699566  T
Q  111 nnnnnnggtcaaaattgaccctaaatca 138  Q
          ||||||||||||||||||||||    
T  17699565 tttttgggtcaaaattgaccctaaatca 17699538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 33164478 - 33164563
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||| ||||||||    
T  33164478 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaa 33164563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 143
Target Start/End: Complemental strand, 29097897 - 29097769
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgannnn 113  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||| |||||| |||||||| || || ||||||        
T  29097897 agacgacgaaatcacaaaaacaaactaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaggggtga-tct 29097799  T
Q  114 nnnggtcaaaattgaccctaaatcatccct 143  Q
       |||||||||||||||||||||| ||||    
T  29097798 ttgggtcaaaattgaccctaaatcacccct 29097769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 138
Target Start/End: Complemental strand, 42609255 - 42609129
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||| ||||||||||||||||| ||||||||  |||||||||||||||||||| |||||||| ||||||||||||||||| || |||| ||||     
T  42609255 cagagacgacaaaatcacaaaaacaaacaaaagaaaatagaaaatatgtgaaatcacttattcaattaggatagaagaaaaaacaattcggatgagtga- 42609157  T
Q  111 nnnnnnggtcaaaattgaccctaaatca 138  Q
          ||||||||||||||||||||||    
T  42609156 tttttaggtcaaaattgaccctaaatca 42609129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 11 - 151
Target Start/End: Original strand, 17096249 - 17096391
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaag---aaaaaacaactcagatgggt 107  Q
    |||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||| |||||||| ||||||||   |||||||||||  || ||||    
T  17096249 cagagacgacaaaatcacaaaaacaaacgaaaggaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaaaaacaactgggaggggt 17096348  T
Q  108 gannnnnnnggtcaaaattgaccctaaatcatccctctaacaag 151  Q
    ||       |||||||||||||||||||||| |||||| |||||    
T  17096349 ga-ttattgggtcaaaattgaccctaaatcacccctctgacaag 17096391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 27241172 - 27241077
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||| |||| ||| |||||||| ||||| ||||||    
T  27241172 agacgacgaaattacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattcagaggggtga 27241077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 28040740 - 28040657
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaac 94  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||| ||| ||||||    
T  28040740 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatataaggaaaaac 28040657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 39179838 - 39179920
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaa 93  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||  ||||||| |||||    
T  39179838 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattagaatagaaggaaaaa 39179920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 42396522 - 42396604
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaa 93  Q
    ||||||||||||||||||||||||||| ||||||||||  ||||||||||||||| ||| |||||||||||||||||||||||    
T  42396522 cagagacgacgaaatcacaaaaacaaatgaaagaaaacaaaaaatatgtgaaatcgcttattcaattaagatagaagaaaaaa 42396604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 10 - 99
Target Start/End: Original strand, 178115 - 178204
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactc 99  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||| |||| ||| ||| |||||||    
T  178115 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattaggatataaggaaacacaactc 178204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 3740467 - 3740375
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgg 105  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||  ||||||| ||||||||    
T  3740467 agagacgacgaaatcacacaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaag-gaaaacaattcagatgg 3740375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 12 - 147
Target Start/End: Complemental strand, 6281154 - 6281020
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgann 111  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||| ||||||||  ||||||| ||||| || ||||| ||||||      
T  6281154 agagacgacgaaatcacaaaaacaaacgaaagaaaatagaaaatatgtaaaatcacttattcaattagaatagaaggaaaaataattcagaggggtga-t 6281056  T
Q  112 nnnnnggtcaaaattgaccctaaatcatccctctaa 147  Q
         |||||||||||||| ||||||| ||||||||    
T  6281055 ttttgggtcaaaattgaccataaatcacccctctaa 6281020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 32347724 - 32347858
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaa-gaaaaaacaactcagatgggtga 109  Q
    |||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||| |||||||||| || || ||||||    
T  32347724 cagaaacgacgaaatcacaaaaacaaacgaaataaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaaacaagtcggaggggtga 32347823  T
Q  110 nnnnnnnggtcaaaattgaccctaaatcatccctct 145  Q
           ||||||| |||||||||||||| ||||||    
T  32347824 -tttttgggtcaaagttgaccctaaatcacccctct 32347858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 18653894 - 18653806
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaact 98  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||  |||||||||| |||||||| |||| ||||||||||||||    
T  18653894 gcagagacgacgaaatcacaaaaacaaacgaaagaaatcagaaaatatacgaaatcacttattcaattaggatataagaaaaaacaact 18653806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 12891788 - 12891706
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaa 92  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||| ||| ||||    
T  12891788 gcagagacaacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaa 12891706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 43493972 - 43493848
Alignment:
Q  22 aaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgannnnnnnggtca 121  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||  ||||||| |||||||| || ||  |||||       | |||    
T  43493972 aaatcacaaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaattagaatagaaggaaaaacaattcggagaggtga-tttttggatca 43493874  T
Q  122 aaattgaccctaaatcatccctctaa 147  Q
    ||||||||||||||||| ||||||||    
T  43493873 aaattgaccctaaatcacccctctaa 43493848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 3079315 - 3079413
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    |||||||||| ||||||||||||||||||||| ||| | |||||||||| ||||||||| |||||||| |||| ||| |||||||| || || ||||||    
T  3079315 cagagacgacaaaatcacaaaaacaaacgaaaaaaagcagaaaatatgttaaatcacttattcaattatgatataaggaaaaacaaatcggaggggtga 3079413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 6681887 - 6681972
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactc 99  Q
    |||||| ||||||| |||||||||||||||||||   ||||||||||||||||||||| ||||||| ||||| ||| |||||||||||    
T  6681887 agagacaacgaaattacaaaaacaaacgaaagaat--tgaaaatatgtgaaatcacttattcaattcagataaaaggaaaaacaactc 6681972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 12439649 - 12439729
Alignment:
Q  16 acgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    |||||||||||||||||||||||||||||||||  ||||||| ||||||||||| ||||| || |||||||  ||||||||    
T  12439649 acgacgaaatcacaaaaacaaacgaaagaaaacaaaaaatatatgaaatcacttattcaactaggatagaatgaaaaacaa 12439729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 20483294 - 20483233
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaa 75  Q
    ||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||| |||||    
T  20483294 agacgacgaaatcacaaaaacaaacaaaacaaaacagaaaatatgtgaaatcacttattcaa 20483233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 23882126 - 23882211
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    |||||||||||||||||||||||||||||| ||||||   ||||||||| ||||||||| |||||||  |||||||  ||||||||    
T  23882126 cagagacgacgaaatcacaaaaacaaacgatagaaaatataaaatatgtcaaatcacttattcaatttggatagaaagaaaaacaa 23882211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 39531422 - 39531494
Alignment:
Q  19 acgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaa 92  Q
    |||||||||||||||||||| ||||||||| |||| ||||||||||||||| |||||||| |||||||| ||||    
T  39531422 acgaaatcacaaaaacaaacaaaagaaaacagaaa-tatgtgaaatcacttattcaattacgatagaaggaaaa 39531494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 2555360 - 2555418
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcactt 69  Q
    ||||||||||||||||| ||||||||||||||||||||  |||| ||||||||||||||    
T  2555360 cagagacgacgaaatcataaaaacaaacgaaagaaaacaaaaaaaatgtgaaatcactt 2555418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 11734829 - 11734892
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaat 76  Q
    |||||||||||||||||||||| ||||| ||||||||  |||||||||||||||||||| ||||||    
T  11734829 cagagacgacgaaatcacaaaagcaaactaaagaaaa--gaaaatatgtgaaatcacttattcaat 11734892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 14535000 - 14534959
Alignment:
Q  21 gaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaa 62  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14535000 gaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaa 14534959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 25962033 - 25961953
Alignment:
Q  16 acgacgaaatcacaaaaacaaacgaaagaaaactg-aaaatatgt-gaaatcacttgttcaattaagatagaagaaaaaac 94  Q
    |||||||||||||||||||||| |||||||||||| ||||||||| |||||||||| || ||||| |||| ||| ||||||    
T  25962033 acgacgaaatcacaaaaacaaaggaaagaaaactgaaaaatatgtagaaatcacttatttaattaggatataaggaaaaac 25961953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 585916 - 585867
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 63  Q
    ||||||||||||||||||||||||||||| || | |||||||||||||||    
T  585916 agacgacgaaatcacaaaaacaaacgaaataagattgaaaatatgtgaaa 585867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 25487716 - 25487667
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 63  Q
    ||||||||||||||| |||||||||||||||| | |||||||||||||||    
T  25487716 agacgacgaaatcacgaaaacaaacgaaagaacaatgaaaatatgtgaaa 25487667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 7771831 - 7771887
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaac-tgaaaatatgtgaaatca 66  Q
    ||||||||||||||||||||||||||| ||||||||||   ||||||||||||||||    
T  7771831 cagagacgacgaaatcacaaaaacaaatgaaagaaaacaaaaaaatatgtgaaatca 7771887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 26240692 - 26240740
Alignment:
Q  15 gacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 63  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||||    
T  26240692 gacgacgaaatcacaataacaaataaaagaaaactgaaaatatgtgaaa 26240740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 99
Target Start/End: Original strand, 981076 - 981123
Alignment:
Q  52 aaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactc 99  Q
    ||||||||||||||||| ||||||||| |||||||| |||||||||||    
T  981076 aaatatgtgaaatcactcgttcaattatgatagaaggaaaaacaactc 981123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 35276001 - 35276044
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatat 57  Q
    ||||||| |||||||||||||||||||||||| |||||||||||    
T  35276001 agacgacaaaatcacaaaaacaaacgaaagaagactgaaaatat 35276044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 7150925 - 7150859
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgt-gaaatcacttgttcaattaa 79  Q
    ||||| |||| ||||||||||||||||| ||| ||||||||||||| ||||| |||| |||||||||    
T  7150925 agacgtcgaattcacaaaaacaaacgaaggaagactgaaaatatgtagaaattacttattcaattaa 7150859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 12215244 - 12215178
Alignment:
Q  13 gagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaa-atcacttgttcaatta 78  Q
    ||||||||||||||||| || |||||||||||| ||| |||||||||||| ||||  ||||||||||    
T  12215244 gagacgacgaaatcacataagcaaacgaaagaagactaaaaatatgtgaagatcatctgttcaatta 12215178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 32309271 - 32309226
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgt 59  Q
    |||||||||||| ||||||||||| ||||||||||| |||||||||    
T  32309271 agacgacgaaattacaaaaacaaaagaaagaaaactaaaaatatgt 32309226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 26905651 - 26905707
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgt-gaaatcactt 69  Q
    ||||||||| || | ||||||||||||||||| ||||||||||||| ||||||||||    
T  26905651 agacgacgagattagaaaaacaaacgaaagaagactgaaaatatgtggaaatcactt 26905707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 374384 - 374342
Alignment:
Q  21 gaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 63  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||    
T  374384 gaaatcacaaaaacaaacaaaataaaactgaaaatacgtgaaa 374342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 11824847 - 11824896
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 63  Q
    |||||| |||||||||||||||||| | |||| ||| |||||||||||||    
T  11824847 agacgatgaaatcacaaaaacaaactatagaagactcaaaatatgtgaaa 11824896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 17523535 - 17523583
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 63  Q
    ||||||||||||||||||| ||| ||||||||| ||| ||||||||||||    
T  17523535 agacgacgaaatcacaaaaccaa-cgaaagaaagctgtaaatatgtgaaa 17523583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 4e-38; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 15590089 - 15590222
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||||     
T  15590089 cagagacgacgaaatcacaaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaagaaaaaacaattcagaggggtga- 15590187  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctct 145  Q
          |||||||||||||||||||||| ||||||    
T  15590188 tttttgggtcaaaattgaccctaaatcacccctct 15590222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 151
Target Start/End: Original strand, 6419868 - 6420007
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    ||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||| |||||||| |||||||| |||||||||||||| ||||||     
T  6419868 cagagacgacgaaatcacaaaaacaaatgaaagaaaacaaaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcagaggggtga- 6419966  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctctaacaag 151  Q
          | |||||||||||||||||||| |||||| |||||    
T  6419967 tttttggatcaaaattgaccctaaatcacccctctgacaag 6420007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 19402818 - 19402916
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||| |||||||||||| | ||||||    
T  19402818 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttgttcaattatgatacaaggaaaaacaactcaaaggggtga 19402916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 12 - 151
Target Start/End: Original strand, 12481381 - 12481519
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgann 111  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||| |||||||| || || ||||||      
T  12481381 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaggggtga-t 12481479  T
Q  112 nnnnnggtcaaaattgaccctaaatcatccctctaacaag 151  Q
         |||||||||||| ||||||||| |||||| |||||    
T  12481480 ttttgggtcaaaattgatcctaaatcacccctctgacaag 12481519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 11 - 151
Target Start/End: Original strand, 2304820 - 2304959
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| || |||||  ||||||||||||| || |||     
T  2304820 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgacagaagggaaaacaactcagagggttga- 2304918  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctctaacaag 151  Q
          ||||||||| || ||||||||| ||||||||||||    
T  2304919 tttttgggtcaaaatcgatcctaaatcacccctctaacaag 2304959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 4921890 - 4921973
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaa 93  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  4921890 gcagagacgacaaaatcacaaaaacaaacgaaataaaactgaaaatatgtgaaatcacttattcaattaagatagaaggaaaaa 4921973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 151
Target Start/End: Complemental strand, 23654361 - 23654222
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||| |||| ||||| |||||| |||||||| || |||||||||     
T  23654361 cagagacgacgaaatcacaaaaacaaacgaaataaaacaaaaaatatgtgaaatcacttattcagttaaggtagaaggaaaaacaaatcggatgggtga- 23654263  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctctaacaag 151  Q
          |||||||||||||||||||||| | |||| |||||    
T  23654262 tttttgggtcaaaattgaccctaaatcacctctctgacaag 23654222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 4393882 - 4393783
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    |||||||| | |||||||||||||||||||||||||||  |||||||||||||||||||||||| |||| ||||||||  ||||||||||||| ||||||    
T  4393882 gcagagaccatgaaatcacaaaaacaaacgaaagaaaaaagaaaatatgtgaaatcacttgttctattaggatagaaggtaaaacaactcagaggggtga 4393783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 12 - 147
Target Start/End: Original strand, 21507819 - 21507953
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgann 111  Q
    ||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||| ||||| || |||||||| |||||||| |  || ||||||      
T  21507819 agagacgacaaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaactaggatagaaggaaaaacaatttggaggggtga-t 21507917  T
Q  112 nnnnnggtcaaaattgaccctaaatcatccctctaa 147  Q
         |||||||||||||||||||||| ||||||||    
T  21507918 gtttgggtcaaaattgaccctaaatcacccctctaa 21507953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 147
Target Start/End: Original strand, 8693667 - 8693805
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaatt---aagatagaagaaaaaacaactcagatgggt 107  Q
    |||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||| |||||||   | |||||||| |||||||| || |||||||    
T  8693667 cagagacgacaaaatgacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggaggatagaaggaaaaacaattcggatgggt 8693766  T
Q  108 gannnnnnnggtcaaaattgaccctaaatcatccctctaa 147  Q
    ||       |||||||||||||| ||||||| ||||||||    
T  8693767 ga-tttttgggtcaaaattgaccttaaatcacccctctaa 8693805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 11 - 147
Target Start/End: Original strand, 14783181 - 14783316
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    ||||||||||||||||||||||| ||| ||||||||||  ||||||||||||||||||| ||||| || |||||||| |||||||| || || | ||||     
T  14783181 cagagacgacgaaatcacaaaaagaaatgaaagaaaacaaaaaatatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggcgtga- 14783279  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctctaa 147  Q
          |||||||||||||||||||||| ||||||||    
T  14783280 tttttgggtcaaaattgaccctaaatcagccctctaa 14783316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 31937431 - 31937510
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaa 92  Q
    ||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||| |||||||| |||||||||||||    
T  31937431 agagacgacgaaatcacaaaaacaaacgaaa-aaatcagaaaatatgtgaaatcacttattcaattaggatagaagaaaaa 31937510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 23638128 - 23638216
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactc 99  Q
    ||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||| ||||||||   |||||| |||||| ||||    
T  23638128 cagagacgacgaaattacaaacacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattattgtagaaggaaaaacgactc 23638216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 6296259 - 6296341
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaa 93  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||||| ||||| |||||||| | |||||| |||||    
T  6296259 cagagacgacgaaatcacaaaaacaaacgaaagaaactagaaaatatgtgaaaccacttattcaattagggtagaaggaaaaa 6296341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 6303069 - 6303151
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaa 93  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||||| ||||| |||||||| | |||||| |||||    
T  6303069 cagagacgacgaaatcacaaaaacaaacgaaagaaactagaaaatatgtgaaaccacttattcaattagggtagaaggaaaaa 6303151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 30734223 - 30734300
Alignment:
Q  221 agtgattgtatatccataaattgaatttagattcttccgaatgatttatttttaggtggagctgagacttaagtttaa 298  Q
    |||||||| ||||| |||||||||||||| ||| ||| ||| ||||||||||||||||||||| ||||||||||||||    
T  30734223 agtgattgcatatcaataaattgaatttaaatttttctgaacgatttatttttaggtggagctaagacttaagtttaa 30734300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 29927105 - 29927162
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcactt 69  Q
    ||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||    
T  29927105 agagacgacaaaatcacaaaaacaaacgaaagaaaacagaaaatttgtgaaatcactt 29927162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 31801243 - 31801293
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaat 64  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  31801243 agacgacgaaatcacaacaacaaacaaaagaaaactgaaaatatgtgaaat 31801293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 31705276 - 31705209
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaatta 78  Q
    |||||||||||||||||||||| |||||| |||||||  ||||||||||||||| | || ||||||||    
T  31705276 cagagacgacgaaatcacaaaagcaaacggaagaaaatagaaaatatgtgaaattatttattcaatta 31705209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 8508251 - 8508202
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 63  Q
    ||||||||||||||||||||||| |||||||||| | |||||||||||||    
T  8508251 agacgacgaaatcacaaaaacaatcgaaagaaaattaaaaatatgtgaaa 8508202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 35219920 - 35219995
Alignment:
Q  16 acgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaa 92  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||| ||||||| ||| |||  |||||||| ||||    
T  35219920 acgacgaaatcacaaaa-caaacaaaagaaaacagaaaatatgtgatatcacttattcgattcggatagaaggaaaa 35219995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 20028711 - 20028766
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcactt 69  Q
    ||||||||||||||||||||||||||||| || || ||||||||||| || |||||    
T  20028711 agacgacgaaatcacaaaaacaaacgaaataagacggaaaatatgtgtaaacactt 20028766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 2488250 - 2488173
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgt-gaaatcacttgttcaattaagatagaag 87  Q
    |||||||| ||||||| |||||| |||||||||||||| |||||||| || |||||||||| ||| |||| ||||||||    
T  2488250 gcagagacaacgaaattacaaaa-caaacgaaagaaaaatgaaaatacgtggaaatcacttattcgattaggatagaag 2488173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 9044099 - 9044142
Alignment:
Q  20 cgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 63  Q
    |||||||||||||||||| |||  ||||||||||||||||||||    
T  9044099 cgaaatcacaaaaacaaatgaataaaaactgaaaatatgtgaaa 9044142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 7870280 - 7870247
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaa 47  Q
    |||| |||||||||||||||||||||||||||||    
T  7870280 agacaacgaaatcacaaaaacaaacgaaagaaaa 7870247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 15057774 - 15057725
Alignment:
Q  29 aaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaatta 78  Q
    ||||||| | |||||||||| |||||||||||||||||| | ||||||||    
T  15057774 aaaaacagatgaaagaaaacagaaaatatgtgaaatcacgtattcaatta 15057725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 16277289 - 16277253
Alignment:
Q  21 gaaatcacaaaaacaaacgaaagaaaactgaaaatat 57  Q
    ||||||||||||||||||||||||||| | |||||||    
T  16277289 gaaatcacaaaaacaaacgaaagaaaaattaaaatat 16277253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 16329085 - 16329129
Alignment:
Q  19 acgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 63  Q
    ||||||||||||| | |||||||| || |||||||||||||||||    
T  16329085 acgaaatcacaaagagaaacgaaacaagactgaaaatatgtgaaa 16329129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 27135223 - 27135179
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaata 56  Q
    |||||||||||||||||||||||||| |||| |||| | ||||||    
T  27135223 agagacgacgaaatcacaaaaacaaaggaaataaaattaaaaata 27135179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 28317535 - 28317571
Alignment:
Q  21 gaaatcacaaaaacaaacgaaagaaaactgaaaatat 57  Q
    ||||||||||||||||||||||||||| | |||||||    
T  28317535 gaaatcacaaaaacaaacgaaagaaaaattaaaatat 28317571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 7e-37; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 11 - 147
Target Start/End: Original strand, 43474138 - 43474273
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||| |||||||| |||||||| || |||||||||     
T  43474138 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatttgtgaaatcacttattcaattaggatagaaggaaaaacaattcggatgggtga- 43474236  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctctaa 147  Q
          |||||||||||||||||||||| ||||||||    
T  43474237 tttttgggtcaaaattgaccctaaatcacccctctaa 43474273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 10 - 151
Target Start/End: Complemental strand, 27095817 - 27095677
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||| |||||||| ||||||||||| || ||||||    
T  27095817 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggaggggtga 27095718  T
Q  110 nnnnnnnggtcaaaattgaccctaaatcatccctctaacaag 151  Q
           |||||||||||||||||||||| || ||| |||||    
T  27095717 -tttttaggtcaaaattgaccctaaatcacccatctgacaag 27095677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 151
Target Start/End: Complemental strand, 25067963 - 25067824
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||| ||||||| |||||||| || || ||||||     
T  25067963 cagagacgacgaaatcacaaaaagaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaaatagaaggaaaaacaaatcggaggggtga- 25067865  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctctaacaag 151  Q
          |||||||||||||||||||||| | ||||||||||    
T  25067864 tttttgggtcaaaattgaccctaaatcacctctctaacaag 25067824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 138
Target Start/End: Complemental strand, 33012188 - 33012062
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||  ||||||| |||||||| || |||| ||||     
T  33012188 cagagacgacgaaatcacaaaaacaaacgaaacaaaactgaaaatatgtgaaatcacttattcaattagaatagaaggaaaaacaattcggatgagtga- 33012090  T
Q  111 nnnnnnggtcaaaattgaccctaaatca 138  Q
          ||||||||||||||||||||||    
T  33012089 tttttgggtcaaaattgaccctaaatca 33012062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 38535315 - 38535448
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| ||||| || ||| | |||||      
T  38535315 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaaggaaaaaaaattcaaaggggtg-c 38535413  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctct 145  Q
          |||||||||||||||||||||| ||||||    
T  38535414 tttttgggtcaaaattgaccctaaatcacccctct 38535448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 44942393 - 44942298
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    ||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| |||||||| |||||||||||||||||||| || ||||||    
T  44942393 agacgacgaaatcacaaaaacaaacaaaagaaaacataaaatatgtgaaatcacttattcaattaggatagaagaaaaaacaactcggaggggtga 44942298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 147
Target Start/End: Complemental strand, 12704798 - 12704663
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||| ||| |||||||| ||  | ||||||     
T  12704798 cagagacgacaaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatataaggaaaaacaattcgaaggggtga- 12704700  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctctaa 147  Q
          |||||||||||||||||||||| ||||||||    
T  12704699 tttttgggtcaaaattgaccctaaatcacccctctaa 12704663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 9978679 - 9978764
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||| ||| ||||||||    
T  9978679 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcatttattcaattaagataaaaggaaaaacaa 9978764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 32314553 - 32314468
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| || |||||||| |||||||||||||||||    
T  32314553 cagagacgacaaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcatttattcaattaggatagaagaaaaaacaa 32314468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 20561142 - 20561275
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||| |||  |||||||| |||||||| || || ||||||     
T  20561142 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaaccacttattcgatttggatagaaggaaaaacaattcggaggggtga- 20561240  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctct 145  Q
          |||||||||||||||||||||| ||||||    
T  20561241 tttttgggtcaaaattgaccctaaatcacccctct 20561275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 10 - 147
Target Start/End: Complemental strand, 15919985 - 15919850
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    ||||||| |||||||||||||||||||||||||||||  |||||||||||||||||| || |||||||| |||||||| ||||||||||| || ||||||    
T  15919985 gcagagatgacgaaatcacaaaaacaaacgaaagaaat-tgaaaatatgtgaaatcatttattcaattaggatagaaggaaaaacaactcggaggggtga 15919887  T
Q  110 nnnnnnnggtcaaaattgaccctaaatcatccctctaa 147  Q
           ||||||||||||| |||||||| ||||||||    
T  15919886 -tttttgggtcaaaattgactctaaatcacccctctaa 15919850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 14 - 147
Target Start/End: Original strand, 31908829 - 31908961
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgannnn 113  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| || |||| |||||||||||| || || ||||||        
T  31908829 agacgacgaaatcagaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaactaggataaaagaaaaaacaattcggaagggtga-ttt 31908927  T
Q  114 nnnggtcaaaattgaccctaaatcatccctctaa 147  Q
       | ||||||||||| |||||||||||||||||    
T  31908928 ttggatcaaaattgactctaaatcatccctctaa 31908961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 28231107 - 28231205
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    ||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||| |||||  |||||||||| |||||||| || |||||||||    
T  28231107 cagagacgatggaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaaccaagatagaaggaaaaacaattcggatgggtga 28231205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 4604317 - 4604405
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactc 99  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||| ||||||||  ||||||| |||||||||||    
T  4604317 cagagacgacgaaatcacaaaaacaatcgaaagaaagcagaaaatatgtgaaatcacttattcaattagaatagaaggaaaaacaactc 4604405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 10287019 - 10287095
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaa 90  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||| ||||||    
T  10287019 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataaaagaaa 10287095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 13740672 - 13740755
Alignment:
Q  13 gagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    |||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||| |||||||| ||||||||    
T  13740672 gagatgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatatgaaatcacttattcaattaggatagaaggaaaaacaa 13740755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 11 - 151
Target Start/End: Complemental strand, 22597246 - 22597107
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||| |||||| ||||||||||||||||||||  ||||||||||||||||||| || ||||| |||||||| ||||||||||| || || |||     
T  22597246 cagagacgacaaaatcataaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttatttaattaggatagaaggaaaaacaactcggagggatga- 22597148  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctctaacaag 151  Q
          |||||||||||||| ||||||| |||||| |||||    
T  22597147 tttttgggtcaaaattgaccttaaatcacccctctgacaag 22597107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 34416774 - 34416856
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||| |||| ||| ||||||||    
T  34416774 agacgacgaaatcacaaaaacaaacaaaaaaaaactgaaaatatgtgaaatcacttattcaattaggatataaggaaaaacaa 34416856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 35333616 - 35333531
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    |||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||| ||||| || ||||||||    
T  35333616 cagaaacgacgaaatcacaaaaataaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagcaggaaaaacaa 35333531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 4426669 - 4426753
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    |||||||||||||||| ||||||||| |||||||||| ||||||||||||||||| || |||||||| |||||||| ||||||||    
T  4426669 agagacgacgaaatcaaaaaaacaaatgaaagaaaacagaaaatatgtgaaatcatttattcaattaggatagaaggaaaaacaa 4426753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 14 - 147
Target Start/End: Complemental strand, 5754396 - 5754264
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgannnn 113  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||||||||| || ||||| || |||||||| |||||||| || || || |||        
T  5754396 agacgacgaaatcacaaaaacaaatgaaagaaaacaaaaaatatgtgaaatcatttattcaactaggatagaaggaaaaacaattcggagggatga-ttt 5754298  T
Q  114 nnnggtcaaaattgaccctaaatcatccctctaa 147  Q
       |||||||||||||||||||||| ||||||||    
T  5754297 ttgggtcaaaattgaccctaaatcacccctctaa 5754264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 4739440 - 4739342
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    ||||||||||||||||||||||||||||| || ||||| ||||||||||||||| |||| || ||||| ||| |||| ||||||||||| || ||||||    
T  4739440 cagagacgacgaaatcacaaaaacaaacggaaaaaaacagaaaatatgtgaaattacttatttaattaggatggaaggaaaaacaactcggaggggtga 4739342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 150
Target Start/End: Complemental strand, 32015333 - 32015193
Alignment:
Q  13 gagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcac----ttgttcaattaagatagaagaaaaaacaactcagatgggtg 108  Q
    ||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||    || || ||||| |||| ||| ||||||||||| || |||||    
T  32015333 gagacgacgaaatcacaaaaacaaatgaatgaaaacagaaaatatgtgaaatcacttatttattgaattatgatataaggaaaaacaactcggaggggtg 32015234  T
Q  109 annnnnnnggtcaaaattgaccctaaatcatccctctaacaa 150  Q
    |       |||||||||||||||||||||| |||||||||||    
T  32015233 a-tttttgggtcaaaattgaccctaaatcacccctctaacaa 32015193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 36868119 - 36867985
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||||||||| |||||||||||||||||||   |||||||||||||||| ||| || |||||  ||||||| |||||||| ||||| ||||||     
T  36868119 cagagacgacgaaatcgcaaaaacaaacgaaagaaagtagaaaatatgtgaaatcgcttattgaattagaatagaaggaaaaacaattcagaggggtgat 36868020  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctcta 146  Q
           ||||||||||||||||||||| |||||||    
T  36868019 ttttga-gtcaaaattgaccctaaatcacccctcta 36867985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 151
Target Start/End: Original strand, 13879017 - 13879163
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaag--------aaaaaacaactcaga 102  Q
    |||||||||| |||||||||||| ||||||||| |||| |||||||||||||||||||| |||||||| ||||||||        |||||||||||| ||    
T  13879017 cagagacgac-aaatcacaaaaataaacgaaaggaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaagaaaaaaaaaacaactcgga 13879115  T
Q  103 tgggtgannnnnnnggtcaaaattgaccctaaatcatccctctaacaag 151  Q
     ||||||       ||||||||||||||||||||||||||||| |||||    
T  13879116 ggggtga-ttattgggtcaaaattgaccctaaatcatccctctgacaag 13879163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 151
Target Start/End: Original strand, 14019142 - 14019288
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaag--------aaaaaacaactcaga 102  Q
    |||||||||| |||||||||||| ||||||||| |||| |||||||||||||||||||| |||||||| ||||||||        |||||||||||| ||    
T  14019142 cagagacgac-aaatcacaaaaataaacgaaaggaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaagaaaaaaaaaacaactcgga 14019240  T
Q  103 tgggtgannnnnnnggtcaaaattgaccctaaatcatccctctaacaag 151  Q
     ||||||       ||||||||||||||||||||||||||||| |||||    
T  14019241 ggggtga-ttattgggtcaaaattgaccctaaatcatccctctgacaag 14019288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 17268136 - 17268222
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactc 99  Q
    |||||||||||||||||||||| ||||| ||| ||||| |||||||||||||||||||| |||||||| |||||||| |||||||||||    
T  17268136 cagagacgacgaaatcacaaaa-caaacaaaa-aaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactc 17268222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 138
Target Start/End: Original strand, 28261898 - 28262029
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaa-----gatagaagaaaaaacaactcagatgg 105  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||| | |||||||||     |||||||| |||||||| || ||||     
T  28261898 cagagacgaagaaatcacaaaaacaaacgaaagaaaacagaaaatatgtaaaatcacatattcaattaaattatgatagaaggaaaaacaattcggatga 28261997  T
Q  106 gtgannnnnnnggtcaaaattgaccctaaatca 138  Q
    ||||       ||||||||||||||||||||||    
T  28261998 gtga-tttttgggtcaaaattgaccctaaatca 28262029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 7072958 - 7073039
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaa 92  Q
    ||||||||| |||||||||||||||||||||||||||| |||||| |||||| | |||| |||||||| |||||||| ||||    
T  7072958 cagagacgatgaaatcacaaaaacaaacgaaagaaaacagaaaatttgtgaagttacttattcaattaggatagaaggaaaa 7073039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 11937868 - 11938002
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatag-aagaaaaaacaactcagatgggtga 109  Q
    ||||||||| ||||| |||||||  |||||||||||||  ||||||||||||||||||| |||||||| ||||| ||| |||||||| || || ||||||    
T  11937868 cagagacgaagaaattacaaaaatcaacgaaagaaaacaaaaaatatgtgaaatcacttattcaattaggatagaaaggaaaaacaattcggaggggtga 11937967  T
Q  110 nnnnnnnggtcaaaattgaccctaaatcatccctct 145  Q
           |||||||||||||||||||||| ||||||    
T  11937968 -tttttgggtcaaaattgaccctaaatcacccctct 11938002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 12891131 - 12891188
Alignment:
Q  13 gagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttg 70  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  12891131 gagacgacgaaatcacaaaaacaaacgaaagaaaatagaaaatatgtgaaatcacttg 12891188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 17767566 - 17767650
Alignment:
Q  16 acgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgt-gaaatcacttgttcaattaagatagaagaaaaaacaactc 99  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| |||||||||| || ||||| |||| ||| |||||||||||    
T  17767566 acgacgaaatcacaaaatcaaatgaaagaaaactgaaaatatgtggaaatcacttatttaattaggatataaggaaaaacaactc 17767650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 147
Target Start/End: Original strand, 18089407 - 18089537
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgann 111  Q
    ||||||||||||||||||||||| ||    ||||||| |||||||||||||||||||| |||||||| |||| |||||||||||| || || | ||||      
T  18089407 agagacgacgaaatcacaaaaactaa----agaaaacagaaaatatgtgaaatcacttattcaattaggatataagaaaaaacaattcggaggagtga-t 18089501  T
Q  112 nnnnnggtcaaaattgaccctaaatcatccctctaa 147  Q
         | |||||||||||||||||||| ||||||||    
T  18089502 ttttggatcaaaattgaccctaaatcacccctctaa 18089537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 9689993 - 9690067
Alignment:
Q  21 gaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaaca 95  Q
    |||||||||||||||||||||| |||||  ||||||||||| ||||||| |||||||| |||||||| |||||||    
T  9689993 gaaatcacaaaaacaaacgaaaaaaaacaaaaaatatgtgagatcacttattcaattaggatagaaggaaaaaca 9690067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 6431402 - 6431483
Alignment:
Q  16 acgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgt-gaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||| || |||||  ||| ||| ||||||||    
T  6431402 acgacgaaatcacaaaaacaaacaaaagaaaactgaaaatatgtggaaatcacttatttaattagaatataaggaaaaacaa 6431483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 17792578 - 17792533
Alignment:
Q  18 gacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  17792578 gacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 17792533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 4732181 - 4732106
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaag 87  Q
    ||||||||| |||||||||||||||||||||| |||||  ||| ||||||||||||||| |||||||| ||||||||    
T  4732181 cagagacgatgaaatcacaaaaacaaacgaaa-aaaacaaaaagtatgtgaaatcacttattcaattaggatagaag 4732106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 34471074 - 34471002
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaa 86  Q
    |||||| || || |||||||||||||||||||||  |||||||||||||||||||  ||||||||||||||||    
T  34471074 agacgaagacattacaaaaacaaacgaaagaaaatagaaaatatgtgaaatcactgattcaattaagatagaa 34471002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 20607332 - 20607374
Alignment:
Q  21 gaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 63  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  20607332 gaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 20607374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 17116415 - 17116464
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 63  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  17116415 agacgacgaaatcacataaacaaacgaaagaagactgaaaatatgtgaaa 17116464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 41797702 - 41797649
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcac 67  Q
    |||||||||||||||||||||||||||||||||||  | |||||||||||||||    
T  41797702 agacgacgaaatcacaaaaacaaacgaaagaaaacatataatatgtgaaatcac 41797649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 11581141 - 11581190
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 63  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||    
T  11581141 agacgacgaaatcacaaaaacaaaccaaagaaaactaaaaatatatgaaa 11581190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 20598648 - 20598695
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtga 61  Q
    ||||||||||| |||||||||||||| || ||||||||||||||||||    
T  20598648 agacgacgaaaccacaaaaacaaacgtaataaaactgaaaatatgtga 20598695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 102
Target Start/End: Original strand, 34963105 - 34963167
Alignment:
Q  40 aaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcaga 102  Q
    ||||||||| ||||| |||||||||||||| |||||||| | |||||| |||||||| |||||    
T  34963105 aaagaaaacagaaaaaatgtgaaatcacttattcaattagggtagaaggaaaaacaaatcaga 34963167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 15028323 - 15028372
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 63  Q
    |||||| ||||||  ||||||||||||||||| |||||||||||||||||    
T  15028323 agacgatgaaatcgaaaaaacaaacgaaagaagactgaaaatatgtgaaa 15028372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 11798537 - 11798613
Alignment:
Q  22 aaatcacaaaaacaaacgaaagaaaactgaaaatatgt-gaaatcacttgttcaattaagatagaagaaaaaacaac 97  Q
    ||||||||||||||||| |||||||||| ||||||||| ||||| |||| || ||||| |||| ||| |||| ||||    
T  11798537 aaatcacaaaaacaaacaaaagaaaactaaaaatatgtggaaattacttatttaattaggatataaggaaaagcaac 11798613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 12994224 - 12994270
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtg 60  Q
    ||||| ||||||||||| |||||| ||||||||||| ||||||||||    
T  12994224 agacggcgaaatcacaagaacaaatgaaagaaaactaaaaatatgtg 12994270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 44150053 - 44150101
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 63  Q
    |||| |||||||||||||| |||| ||||||||||| |||||||||||||    
T  44150053 agacaacgaaatcacaaaaccaaa-gaaagaaaactaaaaatatgtgaaa 44150101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 19042574 - 19042610
Alignment:
Q  21 gaaatcacaaaaacaaacgaaagaaaactgaaaatat 57  Q
    ||||||||||||||||||||||||||| | |||||||    
T  19042574 gaaatcacaaaaacaaacgaaagaaaaattaaaatat 19042610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 39837301 - 39837265
Alignment:
Q  21 gaaatcacaaaaacaaacgaaagaaaactgaaaatat 57  Q
    ||||||||||||||||||||||||||| | |||||||    
T  39837301 gaaatcacaaaaacaaacgaaagaaaaattaaaatat 39837265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 40990327 - 40990271
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgt-gaaatcactt 69  Q
    |||||||||||||| ||||||| || |||||||||| ||||| ||| ||||||||||    
T  40990327 agacgacgaaatcaaaaaaacatacaaaagaaaactaaaaatgtgtcgaaatcactt 40990271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 2e-34; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 151
Target Start/End: Original strand, 28664922 - 28665061
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| ||||||||||| || ||||||     
T  28664922 cagagacgacaaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggaggggtga- 28665020  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctctaacaag 151  Q
          |||||||||||||||||||||| || ||| |||||    
T  28665021 ttttagggtcaaaattgaccctaaatcacccatctgacaag 28665061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 32643123 - 32643040
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaac 94  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  32643123 cagagacgacgaaatcacaaaaacaaacaaaagaaaacagaaaatatgtgaaatcacttgttcaattaaggtagaagaaaaaac 32643040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 147
Target Start/End: Complemental strand, 21603573 - 21603439
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||| |||||||||||||||| |||||||||| || ||||||||||||||||| |||||||| |||||||| |||||||| ||||| |||||      
T  21603573 cagagacgacaaaatcacaaaaacaaaggaaagaaaacagagaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcagaggggtg-- 21603476  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctctaa 147  Q
          |||||||||||||||||||||| ||||||||    
T  21603475 ctttttggtcaaaattgaccctaaatcacccctctaa 21603439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 36579322 - 36579455
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||||||||||||||||||||| |||||||||  |||||||||| |||||||| ||||| || |||||||| |||||||| || || ||||||     
T  36579322 cagagacgacgaaatcacaaaaacaaacaaaagaaaacaaaaaatatgtggaatcacttattcaactaggatagaaggaaaaacaattcggaggggtga- 36579420  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctct 145  Q
          |||||||||||||||||||||||||||||    
T  36579421 ttttcgggtcaaaattgaccctaaatcatccctct 36579455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 39532988 - 39533076
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcaga 102  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||| |||||    
T  39532988 agacgacgaaatcacgaaaacaaacaaaagaaaacagaaaatatgtgaaatcacttattcaattaagatagaaggaaaaacaattcaga 39533076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 42603782 - 42603877
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||  |||||||| || || ||||||    
T  42603782 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaggggtga 42603877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 11 - 147
Target Start/End: Original strand, 45457566 - 45457701
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    ||||||||| |||||||| |||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||| |||||||| || || | ||||     
T  45457566 cagagacgatgaaatcacgaaaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattaagatagaaggaaaaacaattcggaggagtgat 45457665  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctctaa 147  Q
           ||||||||||||||||||||| ||||||||    
T  45457666 ttttgc-gtcaaaattgaccctaaatcacccctctaa 45457701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 143
Target Start/End: Complemental strand, 9785428 - 9785297
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    ||||||||||||||||||||||| |||| |||||||||  ||||||||||||||||||| ||||||||||||||||| |||||||| ||  | ||||||     
T  9785428 cagagacgacgaaatcacaaaaataaacaaaagaaaacaaaaaatatgtgaaatcacttattcaattaagatagaaggaaaaacaattcgaaggggtga- 9785330  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccct 143  Q
          |||||||||||||||||||||| ||||    
T  9785329 tttttgggtcaaaattgaccctaaatcacccct 9785297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 10094549 - 10094467
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||| ||| ||||||||    
T  10094549 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaa 10094467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 14657830 - 14657931
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaa--atatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggt 107  Q
    ||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||| |||| ||||||||||||||||| ||||||| ||| ||| |||    
T  14657830 gcagagacgacgaaatcacaaaaacaaacaaaagaaaactgaaaatatatgtgaaataacttattcaattaagatagaaggaaaaacagctcggattggt 14657929  T
Q  108 ga 109  Q
    ||    
T  14657930 ga 14657931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 11833130 - 11833045
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||| || ||||| ||||||||    
T  11833130 cagagacgacgaaatcacaaaaacaaacgaaagaatacagaaaatatgtgaaatcacttattcaattaggaaagaaggaaaaacaa 11833045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 15674622 - 15674707
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||| || ||||||||    
T  15674622 cagagatgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataggaggaaaaacaa 15674707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 10 - 99
Target Start/End: Original strand, 24320232 - 24320321
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactc 99  Q
    |||||||||| |||||||||||||||||| |||||||||  ||||||||||||||||||| || |||||||||||||| |||||||||||    
T  24320232 gcagagacgatgaaatcacaaaaacaaacaaaagaaaacaaaaaatatgtgaaatcacttattaaattaagatagaaggaaaaacaactc 24320321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 46026039 - 46026172
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||||| |||| |||| |||||||| |||||||| |||||||| || |||| ||||     
T  46026039 cagagacgacgaaataacaaaaacaaacgaaagaaaacaaaaaatatgttaaataacttattcaattaggatagaaggaaaaacaattcggatgtgtga- 46026137  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctct 145  Q
          |||||||||||||||||||||| ||||||    
T  46026138 tttttgggtcaaaattgaccctaaatcacccctct 46026172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 2622700 - 2622605
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    |||||||||||||||||||||||||| |||||||| |||||||| |||||| |||| ||||||||||||||||| |||||||| || |||| ||||    
T  2622700 agacgacgaaatcacaaaaacaaacgcaagaaaacagaaaatatctgaaattacttattcaattaagatagaaggaaaaacaattcggatgcgtga 2622605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 147
Target Start/End: Complemental strand, 41288069 - 41287933
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaa-gaaaaaacaactcagatgggtga 109  Q
    |||||||||| ||||||| |||||||||||||| |||| |||||||||||||||||| | |||||||| ||||||| |||||||  |||| |||||||||    
T  41288069 cagagacgacaaaatcactaaaacaaacgaaaggaaacagaaaatatgtgaaatcacctattcaattaggatagaaggaaaaaatcactcggatgggtga 41287970  T
Q  110 nnnnnnnggtcaaaattgaccctaaatcatccctctaa 147  Q
           |||||||||||||||||||||| ||||||||    
T  41287969 -ttattgggtcaaaattgaccctaaatcacccctctaa 41287933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 1281147 - 1281245
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||  ||| ||  |||||||| || |||||||||    
T  1281147 cagagacgacgaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaattagaatataatgaaaaacaattcggatgggtga 1281245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 11 - 145
Target Start/End: Complemental strand, 21990773 - 21990639
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatag-aagaaaaaacaactcagatgggtga 109  Q
    |||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||| ||||| | |||||||||| || || ||||||    
T  21990773 cagaaacgacgaaatcacaaaaacaaacgaaagaaaacagaatatatgtgaaatcacttattcaattaggatagcaggaaaaaacaattcggaggggtga 21990674  T
Q  110 nnnnnnnggtcaaaattgaccctaaatcatccctct 145  Q
            ||||||||||||||||||||| ||||||    
T  21990673 tttttca-gtcaaaattgaccctaaatcacccctct 21990639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 5684476 - 5684391
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    ||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||| |||||||  ||||||||    
T  5684476 cagagacaacgaaatcacaaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaatgaaaaacaa 5684391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 5709526 - 5709441
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    ||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||| |||||||  ||||||||    
T  5709526 cagagacaacgaaatcacaaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaatgaaaaacaa 5709441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 138
Target Start/End: Original strand, 17473733 - 17473859
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||| |||||||||||||||| ||||| |||| |||||||||||||||||||| |||||||| |||| ||| |||||||| || || ||||||     
T  17473733 cagagacgacaaaatcacaaaaacaaatgaaaggaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattcggaggggtga- 17473831  T
Q  111 nnnnnnggtcaaaattgaccctaaatca 138  Q
          ||||||||||||||||||||||    
T  17473832 ttttttggtcaaaattgaccctaaatca 17473859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 138
Target Start/End: Complemental strand, 17579481 - 17579355
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||| |||||||||||||||| ||||| |||| |||||||||||||||||||| |||||||| |||| ||| |||||||| || || ||||||     
T  17579481 cagagacgacaaaatcacaaaaacaaatgaaaggaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattcggaggggtga- 17579383  T
Q  111 nnnnnnggtcaaaattgaccctaaatca 138  Q
          ||||||||||||||||||||||    
T  17579382 ttttttggtcaaaattgaccctaaatca 17579355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 42644778 - 42644689
Alignment:
Q  20 cgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||| |||||||| |||||||| ||| ||| ||||    
T  42644778 cgaaatcacaaaaacaaacgaaagaaaacagagaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcaaatgagtga 42644689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 32740862 - 32740779
Alignment:
Q  13 gagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    |||||||||||||||||||||  |||||||||||||  ||||||||||||||||||| |||||||| |||||||| ||||||||    
T  32740862 gagacgacgaaatcacaaaaatcaacgaaagaaaacaaaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaa 32740779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 9719983 - 9720069
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaa-ctgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    |||||| ||||||||||||||||||||||||| |||| | |||||||||||||||||||| |||||||| |||| ||||||||||||    
T  9719983 cagagatgacgaaatcacaaaaacaaacgaaaaaaaaacagaaaatatgtgaaatcacttattcaattacgatataagaaaaaacaa 9720069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 43847181 - 43847083
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    |||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||| |||||||| ||||  || |||||||| || || ||||||    
T  43847181 cagagacgacgaaatcaccaaaacaaacgaaggaaaacagaaaatatgtgaaatcacttattcaattaggataagaggaaaaacaattcggaggggtga 43847083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 3266499 - 3266423
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaag 87  Q
    |||||||||| |||||||||||| ||||||||| |||| |||||||||||||||||||| |||||||| ||||||||    
T  3266499 cagagacgacaaaatcacaaaaataaacgaaaggaaacagaaaatatgtgaaatcacttattcaattaggatagaag 3266423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 147
Target Start/End: Complemental strand, 10574489 - 10574357
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgannnn 113  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||  || |||||||| |||| ||| |||||||| || || ||||||        
T  10574489 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtaaaatcgtttattcaattaggataaaaggaaaaacaattcggaggggtgatttt 10574390  T
Q  114 nnnggtcaaaattgaccctaaatcatccctctaa 147  Q
        ||||||||||||||||||||| || |||||    
T  10574389 tga-gtcaaaattgaccctaaatcacccatctaa 10574357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 17509214 - 17509346
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||| ||||||||||||||||  |||| |||| |||||||||||||||||||| |||||||| |||| ||| ||||| || || || ||||||     
T  17509214 cagagacgacaaaatcacaaaaacaaattaaaggaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaataattcgga-gggtga- 17509311  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctct 145  Q
          |||||||||||||||||||||||||||||    
T  17509312 ttttttggtcaaaattgaccctaaatcatccctct 17509346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 145
Target Start/End: Complemental strand, 17544000 - 17543868
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||| ||||||||||||||||  |||| |||| |||||||||||||||||||| |||||||| |||| ||| ||||| || || || ||||||     
T  17544000 cagagacgacaaaatcacaaaaacaaattaaaggaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaataattcgga-gggtga- 17543903  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctct 145  Q
          |||||||||||||||||||||||||||||    
T  17543902 ttttttggtcaaaattgaccctaaatcatccctct 17543868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 21954827 - 21954927
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgt-gaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtg 108  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||| || || ||||| |||||||  ||||||||||| |||| |||    
T  21954827 gcagagacgacgaaatcacaaaaacagacgaaagaaaactgacaatatgtggaaatcatttatttaattaggatagaatgaaaaacaactcggatgagtg 21954926  T
Q  109 a 109  Q
    |    
T  21954927 a 21954927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 151
Target Start/End: Complemental strand, 45482175 - 45482036
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    ||||||||||||||||| |||||||||||||| ||  |  ||||||||||||||||||| || ||||| |||||||| ||||||| ||| || ||||||     
T  45482175 cagagacgacgaaatcataaaaacaaacgaaacaacgcataaaatatgtgaaatcacttatttaattaggatagaaggaaaaacagctcggaggggtga- 45482077  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctctaacaag 151  Q
          ||||||||||||||||||||||  ||||| |||||    
T  45482076 ttttggggtcaaaattgaccctaaatcactcctctgacaag 45482036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 99
Target Start/End: Original strand, 4621376 - 4621465
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactc 99  Q
    ||||||| || | |||||||||||||||||||||||||||||||| || ||||||| ||| |||||||| | |||||| |||||||||||    
T  4621376 gcagagatgatggaatcacaaaaacaaacgaaagaaaactgaaaacatatgaaatcgcttattcaattatggtagaaggaaaaacaactc 4621465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 145
Target Start/End: Original strand, 48304406 - 48304538
Alignment:
Q  14 agacgacgaaatcacaaaaa--caaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgann 111  Q
    ||||||||||||||||||||  ||||| ||||||||| |||||| | ||||||||||| |||||||| ||||| || |||| ||| || |||||||||      
T  48304406 agacgacgaaatcacaaaaaaacaaactaaagaaaacagaaaatctatgaaatcacttattcaattaggatagcaggaaaagcaattcggatgggtga-t 48304504  T
Q  112 nnnnnggtcaaaattgaccctaaatcatccctct 145  Q
         |||||||||||||||||||||| ||||||    
T  48304505 ttttgggtcaaaattgaccctaaatcacccctct 48304538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 147
Target Start/End: Complemental strand, 6667506 - 6667371
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttc-aattaagatagaagaaaaaacaactcagatgggtga 109  Q
    ||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||||||| ||| |||||  |||||||||||||||| || |  ||||||    
T  6667506 cagagacgacgaaatcacagaaacaaac-aaacaaaacagaaaatatgtgaaatcacttattcaaattagaatagaagaaaaaacaattcggtggggtga 6667408  T
Q  110 nnnnnnnggtcaaaattgaccctaaatcatccctctaa 147  Q
           ||||||||||||||||||||||  |||||||    
T  6667407 -tttttgggtcaaaattgaccctaaatcactcctctaa 6667371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 143
Target Start/End: Original strand, 22747517 - 22747648
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    ||||||||| |||||||||||||| ||| ||||||||||  ||||||||| ||||||||| |||||||| ||||||||  |||||||||  || ||||||    
T  22747517 gcagagacggcgaaatcacaaaaataaatgaaagaaaacataaaatatgtcaaatcacttattcaattaggatagaag-gaaaacaacttggaggggtga 22747615  T
Q  110 nnnnnnnggtcaaaattgaccctaaatcatccct 143  Q
           |||||||||||||||||||||| ||||    
T  22747616 -tttttgggtcaaaattgaccctaaatcacccct 22747648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 26161091 - 26161038
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaat 64  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  26161091 cagagacgatgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaat 26161038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 27535568 - 27535469
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaactgaaa--atatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    ||||||||| |||||||||||||||| |||| ||||| ||||  |||||||||||||||| | ||||||  ||||||| |||||||| || |||||||||    
T  27535568 agagacgacaaaatcacaaaaacaaatgaaataaaacagaaaatatatgtgaaatcacttatacaattagaatagaaggaaaaacaattcggatgggtga 27535469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 36719562 - 36719620
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaa--tatgtgaaatcac 67  Q
    |||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||    
T  36719562 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatttatgtgaaatcac 36719620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 39707399 - 39707312
Alignment:
Q  13 gagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgt-gaaatcacttgttcaattaagatagaagaaaaaacaactc 99  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||  | ||||| |||| || ||||| |||||||  |||||||||||    
T  39707399 gagacgacgaaatcacaaaaacaaacgaatgaaaagtgaaaatacatggaaataacttatttaattaggatagaaagaaaaacaactc 39707312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 6646610 - 6646652
Alignment:
Q  21 gaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 63  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  6646610 gaaatcacaaaatcaaacgaaagaaaactgaaaatatgtgaaa 6646652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 39990187 - 39990236
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 63  Q
    |||| |||| ||||| ||||||||||||||||||||||||||||||||||    
T  39990187 agacaacgatatcacgaaaacaaacgaaagaaaactgaaaatatgtgaaa 39990236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 9137070 - 9136983
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtg-aaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    |||||||||||| ||||||||||| ||||||||||| || | ||||||||| ||||||||| | ||||| | | ||||| ||||||||    
T  9137070 gcagagacgacggaatcacaaaaagaaacgaaagaagacgggaaatatgtgaaaatcacttttccaattgaaaaagaaggaaaaacaa 9136983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 29352345 - 29352275
Alignment:
Q  23 aatcacaaaaacaaacgaaagaaaactgaaaatatgt-gaaatcacttgttcaattaagatagaagaaaaa 92  Q
    |||||| |||||||||||||||||||||| ||||||| |||||||||| || ||||| |||| || |||||    
T  29352345 aatcacgaaaacaaacgaaagaaaactgagaatatgtggaaatcacttatttaattaggatataataaaaa 29352275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 17223204 - 17223163
Alignment:
Q  22 aaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 63  Q
    |||||||||||||| |||||||||| ||||||||||||||||    
T  17223204 aaatcacaaaaacagacgaaagaaacctgaaaatatgtgaaa 17223163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 33476665 - 33476721
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgt-gaaatcactt 69  Q
    |||||||||||||| ||||||||||| || |||| ||||||||||| ||||||||||    
T  33476665 agacgacgaaatcataaaaacaaacggaataaaattgaaaatatgtggaaatcactt 33476721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 37376043 - 37376093
Alignment:
Q  13 gagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 63  Q
    |||||||| |||||||| |||||||||||||||||  ||||||||| ||||    
T  37376043 gagacgacaaaatcacataaacaaacgaaagaaaatagaaaatatgagaaa 37376093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 14810712 - 14810664
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 63  Q
    ||||||||||||||||||| ||| ||||||||| ||| ||||||||||||    
T  14810712 agacgacgaaatcacaaaaccaa-cgaaagaaagctgtaaatatgtgaaa 14810664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 14811330 - 14811282
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 63  Q
    ||||||||||||||||||| | ||||||||||| ||| ||||||||||||    
T  14811330 agacgacgaaatcacaaaa-cgaacgaaagaaagctggaaatatgtgaaa 14811282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 15257707 - 15257659
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 63  Q
    ||||||||||||||||||| ||| ||||||||| ||| ||||||||||||    
T  15257707 agacgacgaaatcacaaaaccaa-cgaaagaaagctgtaaatatgtgaaa 15257659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 15258325 - 15258277
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 63  Q
    ||||||||||||||||||| | ||||||||||| ||| ||||||||||||    
T  15258325 agacgacgaaatcacaaaa-cgaacgaaagaaagctggaaatatgtgaaa 15258277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 10623909 - 10623861
Alignment:
Q  13 gagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtga 61  Q
    |||| ||| ||| ||||||||||||||||||||||| |||| |||||||    
T  10623909 gagatgactaaaccacaaaaacaaacgaaagaaaaccgaaactatgtga 10623861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 42
Target Start/End: Complemental strand, 37714586 - 37714558
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaa 42  Q
    |||||||||||||||||||||||||||||    
T  37714586 agacgacgaaatcacaaaaacaaacgaaa 37714558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 40761595 - 40761567
Alignment:
Q  117 ggtcaaaattgaccctaaatcatccctct 145  Q
    |||||||||||||||||||||||||||||    
T  40761595 ggtcaaaattgaccctaaatcatccctct 40761567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 40761699 - 40761659
Alignment:
Q  34 caaacgaaagaaaactgaaaatatgtgaaatcacttgttca 74  Q
    |||||||||||||||  ||||||||||||||||||| ||||    
T  40761699 caaacgaaagaaaacataaaatatgtgaaatcacttattca 40761659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 151
Target Start/End: Original strand, 29268787 - 29268926
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||| ||| ||||||||||| || ||||||     
T  29268787 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaactcggaggggtga- 29268885  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctctaacaag 151  Q
          |||||||||||||| ||||||| |||||| |||||    
T  29268886 ttttagggtcaaaattgaccttaaatcacccctctgacaag 29268926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 147
Target Start/End: Original strand, 43244391 - 43244526
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||| |||||||| |||||||| |||||||| ||||| ||||||     
T  43244391 cagagacgacaaaatcacaaaaacaaacgaaagaaaatcgaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcagaggggtga- 43244489  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctctaa 147  Q
          |||||||||||||||||||||| ||||||||    
T  43244490 tttttgggtcaaaattgaccctaaatcacccctctaa 43244526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 24825757 - 24825621
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgannnn 113  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||| |||||||| ||||||||||| || | ||||        
T  24825757 agacgacgaaatcacaaaaacaaacgaaagaaaatagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggaggagtga-ttt 24825659  T
Q  114 nnnggtcaaaattgaccctaaatcatccctctaacaag 151  Q
       |||||||||||| ||||||||| ||||||||||||    
T  24825658 ttaggtcaaaattgatcctaaatcacccctctaacaag 24825621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 30202149 - 30202062
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaact 98  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||| ||||||||||    
T  30202149 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaagataaaaggaaaaacaact 30202062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 151
Target Start/End: Complemental strand, 6911790 - 6911652
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgann 111  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||| |||||||| || ||  |||||      
T  6911790 agagacgaagaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggagaggtga-t 6911692  T
Q  112 nnnnnggtcaaaattgaccctaaatcatccctctaacaag 151  Q
         | |||||||||||||||||||| ||||||||||||    
T  6911691 ttttggatcaaaattgaccctaaatcacccctctaacaag 6911652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 10 - 145
Target Start/End: Original strand, 44757051 - 44757185
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    |||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||| |||||||| |||||||| |||||||||||  ||||||||    
T  44757051 gcagagacgacgaaatcataaaaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcgaatgggtga 44757150  T
Q  110 nnnnnnnggtcaaaattgaccctaaatcatccctct 145  Q
           |||||||||||||| ||||||| ||||||    
T  44757151 -tttttgggtcaaaattgaccttaaatcacccctct 44757185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 5814459 - 5814371
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaact 98  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||  |||||||||    
T  5814459 gcagagacgacgaaatcacaaaaacaaacgaaagaaaactaaaaatatgtgaaataacttattcaattaagatagaagggaaaacaact 5814371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 7083826 - 7083924
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||| |||||||| |||||||| ||| | ||||||    
T  7083826 cagagacgacgaaatcacaaaaacaaacgaaagaaaatagaaaatatgtgaaatcacttattcaattatgatagaaggaaaaacaattcataggggtga 7083924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 6882067 - 6881979
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactc 99  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| ||||| |||||    
T  6882067 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttatttaattaggatagaaggaaaaataactc 6881979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 20399913 - 20400038
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||| |||||||| ||||||||||||| ||| || | |||||||     
T  20399913 cagagacgacgaaatcacaaaaataaacgaaagaaaacagaaaatatatgaaatcacttattcaattaggatagaagaaaaagcaattcgggtgggtga- 20400011  T
Q  111 nnnnnnggtcaaaattgaccctaaatc 137  Q
          |||||||||||||||||||||    
T  20400012 tttttgggtcaaaattgaccctaaatc 20400038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 7060432 - 7060337
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||| |||||||| |||||||| || || ||||||    
T  7060432 agacgacgaaatcacaaaaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggaggggtga 7060337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 26742476 - 26742571
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||  |||||||| || |||||||||    
T  26742476 agacgacaaaatcacgaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaagatagaaagaaaaacaattcggatgggtga 26742571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 13965671 - 13965586
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    ||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||| |||||||| |||||||| ||||||||    
T  13965671 cagagacgacgaaatcacaaaaacaaacgaaagaaaacatagaatatgtgaaatcacttattcaattaggatagaaggaaaaacaa 13965586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 43493297 - 43493382
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    ||||||||||||||||||||||| |||| |||||||||  ||||||||||||||||||| ||||||||||||||||| ||||||||    
T  43493297 cagagacgacgaaatcacaaaaataaacaaaagaaaacaaaaaatatgtgaaatcacttattcaattaagatagaaggaaaaacaa 43493382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 12717129 - 12717213
Alignment:
Q  13 gagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgt-gaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||| |||||||||||||||||    
T  12717129 gagacgaagaaatcacaaaaacaaacgaaagaaaactgaaaatatgtggaaatcacttatttaattaggatagaagaaaaaacaa 12717213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 22757202 - 22757120
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||||||||||||| |||||||| |||||||| ||||||||    
T  22757202 agacgacgaaatcacaaaaacaaacgaaaaaaaacataaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaa 22757120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 50801328 - 50801246
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaa 93  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||| |||| ||| |||||    
T  50801328 cagagacgacgaaatcacaaaaataaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaa 50801246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 25658278 - 25658193
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| || ||||| || ||||| ||||||||    
T  25658278 cagagacgacgaaatcacaaaaacatacgaaagaaaacagaaaatatgtgaaatcacttattaaattaggaaagaaggaaaaacaa 25658193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 26674483 - 26674402
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaa 92  Q
    |||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||| |||||||| ||||    
T  26674483 cagagatgacgaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaattatgatagaaggaaaa 26674402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 38944158 - 38944242
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||| || |||||||| ||||||||    
T  38944158 cagagacgacgaaatcacaaaaacaaacgaaagaaaac-aaaaatatgtgaaatcacttattcaactacgatagaaggaaaaacaa 38944242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 144
Target Start/End: Original strand, 394284 - 394416
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    ||||||||||||||||| | |||||||||||||||| | ||||| |||||||||||||| || ||||| |||||||| |||||||| || || ||||||     
T  394284 cagagacgacgaaatcatagaaacaaacgaaagaaagcagaaaagatgtgaaatcacttattgaattaggatagaaggaaaaacaattcggaggggtga- 394382  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctc 144  Q
          |||||||||||||||||||||| |||||    
T  394383 tttttgggtcaaaattgaccctaaatcacccctc 394416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 626566 - 626655
Alignment:
Q  18 gacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||| |||||||| ||||| || ||||||||||||    
T  626566 gacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aatcacttattcaattatgatagaag-aaaaataattcagatgggtga 626655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 143
Target Start/End: Complemental strand, 8712641 - 8712510
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||  |||| || |||||||| |||||||| |  || ||||||     
T  8712641 cagagatgacgaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttactcaactaggatagaaggaaaaacaattatgaggggtga- 8712543  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccct 143  Q
          |||||||||||||||||||||| ||||    
T  8712542 tttttgggtcaaaattgaccctaaatcacccct 8712510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 146
Target Start/End: Original strand, 11210323 - 11210457
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||||||||||||||||||||||||||||||  | |||||||||||||||||| |||||||| ||| | || ||||| || || || ||||||     
T  11210323 cagagacgacgaaatcacaaaaacaaacgaaagaaaagagtaaatatgtgaaatcacttattcaattatgatgggaggaaaaataattcggaggggtgat 11210422  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctcta 146  Q
          || ||||||||||||||||||| |||||||    
T  11210423 ttttaggg-caaaattgaccctaaatcacccctcta 11210457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 13586250 - 13586336
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaa-ctgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    |||||| ||||||||||||||||||||||||| |||| | |||||||||||||||||||| |||||||| |||| ||||||||||||    
T  13586250 cagagatgacgaaatcacaaaaacaaacgaaaaaaaaacagaaaatatgtgaaatcacttattcaattacgatataagaaaaaacaa 13586336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 20887766 - 20887863
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    |||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||| || ||||||||||||| ||| || || || |||||||||    
T  20887766 cagagacgacgaaatcacaaaaacaaacgaaagaaagcagaaaa-atgtgaaatcacttattgaattaagatagaaaaaataataattcggatgggtga 20887863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 36124359 - 36124442
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |  |||||||||||||| || ||||||||    
T  36124359 cagagacgacgaaatcacaaaaacaaacgaaagaaaac--aaaatatgtgaaatcaatcattcaattaagataggaggaaaaacaa 36124442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 39523520 - 39523435
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    |||||| |||||||||| |||||||||||||||||||| ||||| |||||||||||||| |||||||| |||| ||| ||||||||    
T  39523520 cagagatgacgaaatcataaaaacaaacgaaagaaaacagaaaacatgtgaaatcacttattcaattaggataaaaggaaaaacaa 39523435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 8517466 - 8517542
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaag 87  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||  |||||||    
T  8517466 cagagacggcgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtaaaatcacttattcaattagaatagaag 8517542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 107
Target Start/End: Complemental strand, 24100249 - 24100154
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactga--aaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggt 107  Q
    ||||||||||||  ||||||||||||||||||||| ||  |||||||||||||||||| |||||||| |||||||| |||||||| || |||||||    
T  24100249 agacgacgaaattgcaaaaacaaacgaaagaaaacagagaaaatatgtgaaatcacttattcaattacgatagaaggaaaaacaattcggatgggt 24100154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 24568723 - 24568856
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||| ||||||||||||||||||||||||||| ||||| || ||||||| ||||||||| |||||||| |||||||| ||||| || || || ||||||     
T  24568723 cagatacgacgaaatcacaaaaacaaacgaaataaaacagataatatgtaaaatcacttattcaattaggatagaaggaaaaataattcggaagggtga- 24568821  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctct 145  Q
          |||||||||| ||||||||||| ||||||    
T  24568822 tttttgggtcaaaattcaccctaaatcacccctct 24568856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 45351080 - 45351144
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaa 75  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||    
T  45351080 cagagacgacgaaatcacaaaaacaaacgaaacaaaacagaaaatatgtgaaatcacttattcaa 45351144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 45360559 - 45360623
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaa 75  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||    
T  45360559 cagagacgacgaaatcacaaaaacaaacgaaacaaaacagaaaatatgtgaaatcacttattcaa 45360623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 102
Target Start/End: Original strand, 7861216 - 7861306
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcaga 102  Q
    ||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||| || ||||| |||||||| ||||| || |||||    
T  7861216 cagagacgacgaaatcacaaaaacaaatgaaa-aaaacagaaaatatgtgaaatcacttatttaattaggatagaaggaaaaataattcaga 7861306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 19745501 - 19745415
Alignment:
Q  11 cagagacgacgaaatcacaaaaa-caaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    |||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||| || |||||||| |||| ||| ||||||||    
T  19745501 cagagacgactaaatcacaaaaaacaaacgaaagaaaacagaaaatatgtgaaatcaattattcaattaggataaaagcaaaaacaa 19745415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 19794305 - 19794391
Alignment:
Q  11 cagagacgacgaaatcacaaaa-acaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    |||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||| || |||||||| |||| ||| ||||||||    
T  19794305 cagagacgactaaatcacaaaaaacaaacgaaagaaaacagaaaatatgtgaaatcaattattcaattaggataaaagcaaaaacaa 19794391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 27394941 - 27394859
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaa 93  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||| | |||| |||| |||||||| |||||||| |||||    
T  27394941 cagagacgacgaaatcacaaaaacaaacgaaagaaaacataaaatattttaaattacttattcaattaggatagaaggaaaaa 27394859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 51152235 - 51152138
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    |||||| ||||||||||||||| ||||||||||||| | |||||||||||||||||||| || ||||| |||||||| |||||||| || || ||||||    
T  51152235 cagagatgacgaaatcacaaaa-caaacgaaagaaagcagaaaatatgtgaaatcacttattaaattaggatagaaggaaaaacaattcggaggggtga 51152138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 39837699 - 39837634
Alignment:
Q  18 gacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagata 83  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||    
T  39837699 gacgaaatcaaaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggata 39837634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 24611809 - 24611885
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaag 87  Q
    |||||||| ||||||||||||| ||||||||| ||||  |||||||||||||||||||| |||||||| ||||||||    
T  24611809 cagagacgtcgaaatcacaaaagcaaacgaaaaaaaatagaaaatatgtgaaatcacttattcaattaggatagaag 24611885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 22049413 - 22049500
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgt-gaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    |||||||| |||||| || ||||| ||| ||||||||||||||||||||| |||||||||| |||||||| |||||||| ||||||||    
T  22049413 gcagagacaacgaaaccataaaaataaatgaaagaaaactgaaaatatgtggaaatcacttattcaattaggatagaaggaaaaacaa 22049500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 29922948 - 29922873
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaa 86  Q
    |||||||||| |||||||||||||| ||||||| |||  |||||||||||||||||||| |||||||| |||||||    
T  29922948 cagagacgacaaaatcacaaaaacagacgaaaggaaatagaaaatatgtgaaatcacttattcaattaggatagaa 29922873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 478030 - 478116
Alignment:
Q  19 acgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgg 105  Q
    ||||||||||||||| ||||||||| |||| |||||||||| ||||||||| |||||||| |||| ||| |||||||| || |||||    
T  478030 acgaaatcacaaaaataaacgaaaggaaacagaaaatatgtaaaatcacttattcaattaggatataaggaaaaacaattcggatgg 478116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 2447908 - 2447829
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaa 93  Q
    |||||| |||||||||||||||||| || ||||||  ||| ||||||||||||||| |||||||| ||||||| ||||||    
T  2447908 agacgaagaaatcacaaaaacaaactaatgaaaacataaattatgtgaaatcacttattcaattaggatagaaaaaaaaa 2447829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 3159136 - 3159065
Alignment:
Q  29 aaaaacaaacgaaagaaaactgaaaatatgtg-aaatcacttgttcaattaagatagaagaaaaaacaactc 99  Q
    |||||||||||||||||| ||||||||||||| ||||||||| || ||||| |||||||| |||||||||||    
T  3159136 aaaaacaaacgaaagaaagctgaaaatatgtgaaaatcacttatttaattatgatagaaggaaaaacaactc 3159065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 143
Target Start/End: Complemental strand, 31522074 - 31521962
Alignment:
Q  30 aaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgannnnnnnggtcaaaattgac 129  Q
    ||||||||| |||||||||  | ||||||||||||||||| |||||||| |||||||| |||||||| || || ||||||       |||||||||||||    
T  31522074 aaaacaaactaaagaaaacaaagaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggaggggtga-tttttaggtcaaaattgac 31521976  T
Q  130 cctaaatcatccct 143  Q
    ||||||||| ||||    
T  31521975 cctaaatcacccct 31521962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 28837177 - 28837128
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgt 59  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  28837177 gcagagacgacgaaatcacaaaaacaaacgaaaaaaaacagaaaatatgt 28837128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 32616836 - 32616889
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatc 65  Q
    ||||| |||||||||||||||| |||||||| ||||| ||||||||||||||||    
T  32616836 agagatgacgaaatcacaaaaataaacgaaataaaacagaaaatatgtgaaatc 32616889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 27090836 - 27090759
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgt-gaaatcacttgttcaattaagatagaag 87  Q
    |||||||| ||||||| |||||| |||||||||||||| |||||||| || |||||||||| ||| |||| ||||||||    
T  27090836 gcagagacaacgaaattacaaaa-caaacgaaagaaaaatgaaaatacgtggaaatcacttattcgattaggatagaag 27090759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 42197665 - 42197581
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacg--aaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaa 93  Q
    ||||||||||||||||||||||||||| |  ||| |||||  |||||| ||||| |||||| || ||||| |||||||| |||||    
T  42197665 cagagacgacgaaatcacaaaaacaaatgaaaaaaaaaacaaaaaatacgtgaagtcacttattaaattaggatagaaggaaaaa 42197581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 22621541 - 22621502
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaa 53  Q
    ||||||||||||||||||||||||||||| || |||||||    
T  22621541 agacgacgaaatcacaaaaacaaacgaaataagactgaaa 22621502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 29235294 - 29235343
Alignment:
Q  29 aaaaacaaacgaaagaaaactgaaaatatgtg-aaatcacttgttcaatt 77  Q
    |||||||||| |||||| ||| |||||||||| |||||||||||||||||    
T  29235294 aaaaacaaacaaaagaagactaaaaatatgtgaaaatcacttgttcaatt 29235343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 51958461 - 51958420
Alignment:
Q  13 gagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaa 54  Q
    |||||||||| |||||||||| |||||||| |||||||||||    
T  51958461 gagacgacgagatcacaaaaataaacgaaataaaactgaaaa 51958420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 1551608 - 1551568
Alignment:
Q  22 aaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaa 62  Q
    |||||||||||||||| ||||||| || |||||||||||||    
T  1551608 aaatcacaaaaacaaatgaaagaataccgaaaatatgtgaa 1551568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 2e-34; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 151
Target Start/End: Original strand, 36691817 - 36691956
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||| |||||||| ||||| ||||| || ||||||     
T  36691817 cagagacgacgaaatcacaaaaacaaacgaaaggaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaataactcggaggggtga- 36691915  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctctaacaag 151  Q
          |||||||||||||||||||||| |||||| |||||    
T  36691916 tttttgggtcaaaattgaccctaaatcacccctctgacaag 36691956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 12 - 151
Target Start/End: Original strand, 48652459 - 48652597
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgann 111  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||| |||||||| || || ||||||      
T  48652459 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaggggtga-t 48652557  T
Q  112 nnnnnggtcaaaattgaccctaaatcatccctctaacaag 151  Q
         ||||||| |||||||||||||| |||||| |||||    
T  48652558 ttttgggtcaaagttgaccctaaatcacccctctgacaag 48652597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 41868313 - 41868411
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaa-gaaaaaacaactcagatgggtga 109  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||| ||||||| |||||||||||||||||| ||||    
T  41868313 agagacgacgaaatcacaaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaaacaactcagatgagtga 41868411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 11819194 - 11819056
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    ||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||| |||||||||| |||||| |||||||| || || ||||||     
T  11819194 cagagacgacgaaatcacaaaaacaaatgaaagaaaacataaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaggggtga- 11819096  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctctaacaa 150  Q
          |||||||||||||||||||||| |||||| ||||    
T  11819095 tttttgggtcaaaattgaccctaaatcacccctctgacaa 11819056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 35174815 - 35174717
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||| |||||||| |||||||| ||| | ||||||    
T  35174815 cagagacgacgaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcaaaggggtga 35174717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 109
Target Start/End: Original strand, 54239040 - 54239134
Alignment:
Q  15 gacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| |||||||| || |||| ||||    
T  54239040 gacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggatgtgtga 54239134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 138
Target Start/End: Original strand, 32080772 - 32080898
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||| |||||| |||||||| || || ||||||     
T  32080772 cagagacgacaaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacctattcaattaaggtagaaggaaaaacaaatcggaggggtga- 32080870  T
Q  111 nnnnnnggtcaaaattgaccctaaatca 138  Q
          ||||||||||||||||||||||    
T  32080871 tttttgggtcaaaattgaccctaaatca 32080898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 38527374 - 38527289
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| ||||||||    
T  38527374 cagagacgacgaaatcataaaaacaaacgaaagaaaacagaaaatatgtgaaatcatttattcaattaagatagaaggaaaaacaa 38527289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 49628106 - 49628203
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||| || |||||||| |||||||| ||||| ||||||    
T  49628106 agagacgacgaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaactaggatagaaggaaaaacaattcagaggggtga 49628203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 36624712 - 36624810
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| || | ||| |||||||| |||||||| || |||||||||    
T  36624712 cagagacgacgaaatcacaaaaacaaacaaaagaaaacagaaaatatgtgaaatcacttatttagttaggatagaaggaaaaacaattcggatgggtga 36624810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 14585573 - 14585488
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    ||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||| |||||||| ||||||||    
T  14585573 cagagacgaggaaatcacaaaaacaaacaaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaa 14585488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 14 - 145
Target Start/End: Original strand, 34960879 - 34961009
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgannnn 113  Q
    |||||| ||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||  |||||||||||||||| || || ||||||        
T  34960879 agacgatgaaatcacaaaaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattagaatagaagaaaaaacaattctgaggggtga-ttt 34960977  T
Q  114 nnnggtcaaaattgaccctaaatcatccctct 145  Q
       |||||||||||||||||| ||| ||||||    
T  34960978 ttgggtcaaaattgaccctaagtcacccctct 34961009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 12 - 147
Target Start/End: Complemental strand, 48401009 - 48400875
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgann 111  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| || || || | |||||| |||||||| || |||| ||||      
T  48401009 agagacgacgaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattaaaatagggtagaaggaaaaacaattccgatgtgtga-t 48400911  T
Q  112 nnnnnggtcaaaattgaccctaaatcatccctctaa 147  Q
         |||||||||||||||||||||| ||||||||    
T  48400910 ttttgggtcaaaattgaccctaaatcacccctctaa 48400875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 2147839 - 2147747
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgt-gaaatcacttgttcaattaagatagaagaaaaaacaactcag 101  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||| |||||||  |||| ||||||||    
T  2147839 gcagagacgacgaaatcacaaaaacaaatgaaagaaaactgaaaatatgtggaaatcacttattcaattaggatagaacgaaaaccaactcag 2147747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 31462764 - 31462897
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||| |||||||| |||| ||| |||||||| ||  | ||||||     
T  31462764 cagagacgacgaaatcacaaaaacaaacaaaagaaaacagaaaatatgtaaaatcacttattcaattaggatataaggaaaaacaattcgaaggggtga- 31462862  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctct 145  Q
          |||||||||||||||||||||| ||||||    
T  31462863 tttttgggtcaaaattgaccctaaatcacccctct 31462897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 34103739 - 34103806
Alignment:
Q  15 gacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagat 82  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  34103739 gacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaagat 34103806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 40013290 - 40013357
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaatta 78  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  40013290 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaatta 40013357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 22485069 - 22484991
Alignment:
Q  18 gacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||| |||||||| ||||||||    
T  22485069 gacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgcgaaatcacttattcaattaggatagaaggaaaaacaa 22484991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 24483696 - 24483794
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    |||||||||| |||||||||||||||| | | |||||| |||||||||||||||||||| |||||||| |||||||  |||||||| ||||||||||||    
T  24483696 cagagacgacaaaatcacaaaaacaaatgtatgaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcagatgggtga 24483794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 31270437 - 31270355
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaa 93  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||| |||||||| |||||||| |||||    
T  31270437 cagagacgacgaaattacaaaaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattaggatagaaggaaaaa 31270355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 55090601 - 55090699
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    ||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||| || ||||||| |||||| |||||||| || || ||||||    
T  55090601 cagagacgacggaatcacaaaaacaaatgaaagaaaacagaaaatatgtgaaatcacttatttaattaaggtagaaggaaaaacaaatcggaggggtga 55090699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 153
Target Start/End: Complemental strand, 19645332 - 19645191
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgan 110  Q
    ||||||||||| ||||||||||||||| |||| ||||| |||||||||||||||||||| || ||||| || |||||||||||||| || ||||| ||      
T  19645332 cagagacgacgtaatcacaaaaacaaaggaaaaaaaacagaaaatatgtgaaatcacttatttaattaggacagaagaaaaaacaattcggatggatg-g 19645234  T
Q  111 nnnnnnggtcaaaattgaccctaaatcatccctctaacaagta 153  Q
          |||||||||||||||||||||| || ||||| |||||    
T  19645233 tttttaggtcaaaattgaccctaaatcacccttctaaaaagta 19645191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 147
Target Start/End: Original strand, 53155453 - 53155583
Alignment:
Q  16 acgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgannnnnn 115  Q
    |||||||||| ||||||||||||||||||||||  ||||||||||||||||||| || ||||| |||| ||| |||||||| ||  ||||||||          
T  53155453 acgacgaaattacaaaaacaaacgaaagaaaacataaaatatgtgaaatcacttattgaattaggatataaggaaaaacaattcgaatgggtga-ttttt 53155551  T
Q  116 nggtcaaaattgaccctaaatcatccctctaa 147  Q
     |||||||||||||||||||||| ||||||||    
T  53155552 gggtcaaaattgaccctaaatcacccctctaa 53155583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 3457053 - 3456969
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    |||||||||||||||||||||||||| ||||||||||  ||||||||| ||||||||| |||||||| |||||||| ||||||||    
T  3457053 agagacgacgaaatcacaaaaacaaaggaaagaaaacaaaaaatatgttaaatcacttattcaattaggatagaaggaaaaacaa 3456969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 15 - 145
Target Start/End: Original strand, 13701994 - 13702123
Alignment:
Q  15 gacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgannnnn 114  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||| |||||||  ||||| || ||  | ||||||         
T  13701994 gacgacgaaatcacaaaaacaaatgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaaagaaaaataattcgaaggggtga-cttt 13702092  T
Q  115 nnggtcaaaattgaccctaaatcatccctct 145  Q
      |||||||||||||||||||||| ||||||    
T  13702093 tgggtcaaaattgaccctaaatcacccctct 13702123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 33637513 - 33637429
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||  || |||||||||| |||||| ||||||||    
T  33637513 agagacgacgaaatcacaaaaataaacgaaagaaaacagaaaatatgtgaaatcttttattcaattaaggtagaaggaaaaacaa 33637429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 40883886 - 40883968
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaa 93  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||| |||| ||| |||||    
T  40883886 cagaaacgacgaaatcacaaaaacaaacgaaagaaaacagaaaataagtgaaatcacttattcaattaggataaaaggaaaaa 40883968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 151
Target Start/End: Original strand, 1074913 - 1075050
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtgann 111  Q
    ||||||||| ||||||| ||||||||||||||||||| |||||  |||| |||||||| ||||||||  ||| ||| ||||||||||| |||||||||      
T  1074913 agagacgacaaaatcacgaaaacaaacgaaagaaaacagaaaacgtgtg-aatcacttattcaattagaatataaggaaaaacaactcggatgggtga-t 1075010  T
Q  112 nnnnnggtcaaaattgaccctaaatcatccctctaacaag 151  Q
         |||||||||||||| ||||||| |||||| |||||    
T  1075011 ttttgggtcaaaattgaccataaatcacccctctgacaag 1075050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 39429516 - 39429617
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaactg-aaaatatgt-gaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggt 107  Q
    |||||||||||||||||| ||||||||||||||||| |||| |||| |||| |||| ||||||||||||||  | ||||| |||||||| ||||||||||    
T  39429516 gcagagacgacgaaatcaaaaaaacaaacgaaagaagactgaaaaacatgtggaaagcacttgttcaattagaaaagaaggaaaaacaattcagatgggt 39429615  T
Q  108 ga 109  Q
    ||    
T  39429616 ga 39429617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 39610320 - 39610247
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaag 87  Q
    ||||||| |||||||||||||||||||||| ||||  ||||||||||||||||||| |||||||| ||||||||    
T  39610320 agacgacaaaatcacaaaaacaaacgaaaggaaacaaaaaatatgtgaaatcacttattcaattaggatagaag 39610247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 106052 - 106140
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtg-aaatcacttgttcaattaagatagaagaaaaaacaac 97  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||| || ||||| | |||||  |||||||||    
T  106052 gcagagacgacaaaatcacaaaaacaaacgaaagaaaactaaaaatatgtgaaaatcacttatttaattagggtagaatgaaaaacaac 106140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 3312555 - 3312487
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaatta 78  Q
    ||||||| || ||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  3312555 gcagagatgatgaaataacaaaaacaaacgaaagaaaacttaaaatatgtgaaatcacttattcaatta 3312487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 4206529 - 4206627
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    |||||||||||||||||||||||||||| ||||||||   ||||||||||||| ||||| |||||||| |||| | | |||||||| || || ||||||    
T  4206529 cagagacgacgaaatcacaaaaacaaacaaaagaaaataaaaaatatgtgaaaacacttattcaattaggatatatggaaaaacaattcggaggggtga 4206627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 4219288 - 4219239
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 63  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4219288 agacgacgaaatcataaaaacaaacgaaagaaaactgaaaatatgtgaaa 4219239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 19861298 - 19861365
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacg-aaagaaaactgaaaatatgtgaaatcacttgttcaatta 78  Q
    |||||||||||||||||||||||||||| ||| ||||| | |||||||||||||||||| ||||||||    
T  19861298 agagacgacgaaatcacaaaaacaaacgaaaaaaaaacaggaaatatgtgaaatcacttattcaatta 19861365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 30156299 - 30156432
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaa-cgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    |||||| |||||||||| ||||||||| ||||||||| |  ||||||||||||||||||| |||||||| |||| |||  ||||||| || || ||||||    
T  30156299 cagagaagacgaaatcataaaaacaaaacgaaagaaatcataaaatatgtgaaatcacttattcaattaggataaaag-gaaaacaattcggaggggtga 30156397  T
Q  110 nnnnnnnggtcaaaattgaccctaaatcatccctct 145  Q
           |||||||||||||||||||||| ||||||    
T  30156398 -tttttgggtcaaaattgaccctaaatcacccctct 30156432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 5327497 - 5327553
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtga-aatcactt 69  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  5327497 agacaacgaaatcacaaaaacaaacgaaagaaaactgaaaatttgtgataatcactt 5327553  T

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Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 27189414 - 27189497
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacg-aaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    |||||| ||||||||||||||||| | ||| ||||| |||| |||||||||| |||| |||||||| |||||||| ||||||||    
T  27189414 agacgatgaaatcacaaaaacaaatgaaaaaaaaacagaaattatgtgaaattacttattcaattaggatagaaggaaaaacaa 27189497  T

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Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 55454976 - 55454922
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatca 66  Q
    ||||||||||| ||||||||||||||||||||||||   ||||||||||||||||    
T  55454976 agagacgacgatatcacaaaaacaaacgaaagaaaataaaaaatatgtgaaatca 55454922  T

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Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 4817867 - 4817933
Alignment:
Q  30 aaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    ||||||||||||||||||  |||||||||||||||||| | |||||||| |||| ||  ||||||||    
T  4817867 aaaacaaacgaaagaaaatagaaaatatgtgaaatcacctattcaattaggataaaaagaaaaacaa 4817933  T

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Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 46732770 - 46732815
Alignment:
Q  18 gacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 63  Q
    |||||||||||||||||||| |||| |||| |||||||||||||||    
T  46732770 gacgaaatcacaaaaacaaaagaaataaaattgaaaatatgtgaaa 46732815  T

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Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 53402732 - 53402688
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaat 55  Q
    ||||||||| |||||||||||||||||||||||||| | ||||||    
T  53402732 cagagacgatgaaatcacaaaaacaaacgaaagaaagcagaaaat 53402688  T

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Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 47733900 - 47733933
Alignment:
Q  16 acgacgaaatcacaaaaacaaacgaaagaaaact 49  Q
    |||| |||||||||||||||||||||||||||||    
T  47733900 acgatgaaatcacaaaaacaaacgaaagaaaact 47733933  T

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Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 3961786 - 3961830
Alignment:
Q  16 acgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtg 60  Q
    |||||| ||||| |||||||||||||| || ||||||||||||||    
T  3961786 acgacgtaatcataaaaacaaacgaaataatactgaaaatatgtg 3961830  T

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Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 42398578 - 42398542
Alignment:
Q  21 gaaatcacaaaaacaaacgaaagaaaactgaaaatat 57  Q
    ||||||||||||||||||||||||||| | |||||||    
T  42398578 gaaatcacaaaaacaaacgaaagaaaaattaaaatat 42398542  T

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Target: scaffold1379 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 1095 - 1181
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||| ||||||||    
T  1095 gcagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttattcaattagggtagaaggaaaaacaa 1181  T

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Target: scaffold1379; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 86 - 1
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaa 96  Q
    ||||||||||||||||||||||| |||| |||||||||  ||||||||||||||||||| ||||||||||||||||| ||||||||    
T  86 cagagacgacgaaatcacaaaaataaacaaaagaaaacaaaaaatatgtgaaatcacttattcaattaagatagaaggaaaaacaa 1  T

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Target: scaffold0536 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 3010 - 2872
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaag--aaaaaacaactcagatgggtgann 111  Q
    ||||||| |||||||||||||||||||||| |||| |||||||||||||||||||| |||||||| ||||||||  |||||||||||| || ||||||      
T  3010 agacgacaaaatcacaaaaacaaacgaaaggaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaaaacaactcggaggggtga-t 2912  T
Q  112 nnnnnggtcaaaattgaccctaaatcatccctctaacaag 151  Q
         |||||||||||||||||||||| ||||||||||||    
T  2911 tattgggtcaaaattgaccctaaatcacccctctaacaag 2872  T

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Target: scaffold0321 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 7137 - 7232
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||| ||| |||||||| || || ||||||    
T  7137 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattcggaggggtga 7232  T

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Target: scaffold0056 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 22 - 109
Target Start/End: Complemental strand, 74264 - 74177
Alignment:
Q  22 aaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| |||||||| || |||||||||    
T  74264 aaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggatgggtga 74177  T

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Target: scaffold0155 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 138
Target Start/End: Complemental strand, 35194 - 35067
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatat--gtgaaatcacttgttcaattaagatagaagaaaaaacaactcagatgggtga 109  Q
    ||||| || |||||| ||||||||||||||||||||| ||||||||  |||||||||||| |||||||| |||||||| ||||||||||| |||||||||    
T  35194 agagatgatgaaatcgcaaaaacaaacgaaagaaaacagaaaatatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggatgggtga 35095  T
Q  110 nnnnnnnggtcaaaattgaccctaaatca 138  Q
           ||||||||||||||||||||||    
T  35094 -tttttgggtcaaaattgaccctaaatca 35067  T

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Target: scaffold0001 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 404269 - 404350
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatag-aagaaaaa 92  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||| ||||| ||||||||    
T  404269 agagacgacgaaatcacaaaaacaaacggaagaaaacagaaaatatgtgaaatcacttattcaattaggatagcaagaaaaa 404350  T

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Target: scaffold1350 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 1685 - 1609
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaag 87  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||| | ||||||    
T  1685 cagagacgacgaaatcacaaaaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattatggtagaag 1609  T

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Target: scaffold0121 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 13255 - 13337
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaa 93  Q
    |||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||| |||||||| |||| || ||||||    
T  13255 cagagacgacgaaatcacaaaaacaaacaaaagaaaacagaaaagatgtgaaatcacttattcaattaggataaaaaaaaaaa 13337  T

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Target: scaffold0432 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 2438 - 2518
Alignment:
Q  21 gaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaagaaaaaacaactcaga 102  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||| ||| |||| |||||||| ||||||||||||||    
T  2438 gaaatcacaaaa-caaacgaaagaaaacagaaaatatgtgaaatcacttattcgattatgatagaaggaaaaacaactcaga 2518  T

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Target: scaffold0294 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 4080 - 4153
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttgttcaattaagatagaag 87  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||| || ||||| ||||||||    
T  4080 agacgacgaaatcacaaaaacaaacgaaagaaaacataaaatatgtgaaatcacttatttaattaggatagaag 4153  T

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Target: scaffold0038 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 108641 - 108677
Alignment:
Q  21 gaaatcacaaaaacaaacgaaagaaaactgaaaatat 57  Q
    ||||||||||||||||||||||||||| | |||||||    
T  108641 gaaatcacaaaaacaaacgaaagaaaaattaaaatat 108677  T

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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 202067 - 202119
Alignment:
Q  18 gacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgt-gaaatcactt 69  Q
    ||||||||||||| |  ||||||||||| ||||||||||||| ||||||||||    
T  202067 gacgaaatcacaatacaaaacgaaagaatactgaaaatatgtggaaatcactt 202119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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