View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17569_high_26 (Length: 324)
Name: NF17569_high_26
Description: NF17569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17569_high_26 |
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Alignment Details
Target: chr3 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 1 - 312
Target Start/End: Original strand, 34572191 - 34572502
Alignment:
| Q |
1 |
tcaaacaagacatatcttcatctttccaggaccaagccccttcttgcaaatttgttgtcccttgatgttctgctaaatctttcctaaactgtgaatccgg |
100 |
Q |
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| T |
34572191 |
tcaaacaagacatatcttcatctttccaggaccaagccccttcttgcaaatttgttgtcccttgttgttctgctaaatctttcctaaactgtgaatccgg |
34572290 |
T |
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| Q |
101 |
cgcgaaaagaactacattaagattgtatggagatacttcataaatcttatctactaaaataccaccctgtaaattttcaggactttctggttggttatct |
200 |
Q |
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| T |
34572291 |
cacgaaaagaactacattaagattgtatggagatacttcataaatcttatctactaaaataccaccctgcaaattttcaggactttctggttggttatct |
34572390 |
T |
|
| Q |
201 |
cttgacagcattagtgcaatgccttcttcaaaactacaagggggtgaattttcttgaacactatcttcgtaatcagacaatgaatttgatgtttctgaac |
300 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34572391 |
cttgactgcattagtgcaatgccttcttcaaaactacaagggggtgaattttcttgaacactatcttcgtaatcagacaatgaatttgatgtttctgaac |
34572490 |
T |
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| Q |
301 |
aatccacaggtt |
312 |
Q |
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||||||| |||| |
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| T |
34572491 |
aatccacgggtt |
34572502 |
T |
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