View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17569_low_62 (Length: 202)
Name: NF17569_low_62
Description: NF17569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17569_low_62 |
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Alignment Details
Target: chr1 (Bit Score: 159; Significance: 7e-85; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 14 - 176
Target Start/End: Original strand, 34786307 - 34786469
Alignment:
| Q |
14 |
ataatactttggatgtgtttcttttctttccatttttcaggacttttaaaagttaaagaaactagagttaattaatattagatattggatataacttgtt |
113 |
Q |
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| T |
34786307 |
ataatactttggatgtgtttcttttctttccatttttcaggacttttaaaagttaaagaaactagagttaattaatattagatattggatataacttgtt |
34786406 |
T |
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| Q |
114 |
aaaaactcattcaagtcaacaagactctaccaaaaattcagtgtctaaaattaacttgcacat |
176 |
Q |
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| T |
34786407 |
aaaaactcattcaagtcaacaagactctaccaaaaattcagtgtctaaaactaacttgcacat |
34786469 |
T |
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