View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1756_low_15 (Length: 309)
Name: NF1756_low_15
Description: NF1756
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1756_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 35255321 - 35255038
Alignment:
| Q |
10 |
aagaatattacgggtaggtgcaattttagcatatcttgtgatttaaactatgattcatataaatcttttatgctcaataatttatttggcttatcaaaaa |
109 |
Q |
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| T |
35255321 |
aagaatattacgggtaggtgcaattttagcatatcttgtgatttaaactatgattcatataaatcttttatgctcaataatttatttggcttatcaaaaa |
35255222 |
T |
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| Q |
110 |
atgaaagatttttctaataaaaacaagttacaacatgtgtgagcggaaggtcaaaccttctatgtcaactaccttagatgtaacaatgaaattaatcatg |
209 |
Q |
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| T |
35255221 |
atgaaagatttttctaataaaaacaagttacaacatgtgtgagcggaaggtcgaaccttctatgtcaactaccttagat-----------attaatcatg |
35255133 |
T |
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| Q |
210 |
aaacataattgattgataactt--------taattttgaacatcattaattaactttgtcnnnnnnnnntgtagcaagttatgcatatggtgatg |
296 |
Q |
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| T |
35255132 |
aaacataagtgattgataactttcttaaaataattttgaacatcattaattaactttgtcaaaaaaaaatgtagcaagttatgcatatggagatg |
35255038 |
T |
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