View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1756_low_26 (Length: 243)
Name: NF1756_low_26
Description: NF1756
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1756_low_26 |
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Alignment Details
Target: chr8 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 14 - 226
Target Start/End: Complemental strand, 15264952 - 15264740
Alignment:
| Q |
14 |
caaaggggttcagataggaagaaacaggtccatagtgttggcactgtctaataaatgcgaatgacattgagaattaaacataatgtatcaatgtgtatga |
113 |
Q |
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| T |
15264952 |
caaaggggttcagataggaagaaacaggtccatagtgttggcactgtctaataaatgcgaatgacattgagaattaaacataatgtagcaatgtgtatga |
15264853 |
T |
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| Q |
114 |
gtagttttactcagtagcaacttgaaccaattgctataaatgcacctctgttgtttggccagagtttaatcatcannnnnnncatatgcttctattagtt |
213 |
Q |
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| T |
15264852 |
gtagttttactcagtagcaacttgaaccaattgctataaatgcacctctgttgtttggccagagtttaatcatcatttttttcatatgcttctattagtt |
15264753 |
T |
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| Q |
214 |
caaccgtgtaatt |
226 |
Q |
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| T |
15264752 |
caaccgtgtaatt |
15264740 |
T |
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