View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1756_low_8 (Length: 381)
Name: NF1756_low_8
Description: NF1756
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1756_low_8 |
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Alignment Details
Target: chr6 (Bit Score: 327; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 5 - 366
Target Start/End: Original strand, 6274044 - 6274406
Alignment:
| Q |
5 |
ttaaaataataattttggtgtccttgtaaaactgtgccctaggcgcggccgtccctcctgcccacaatgtagatcaactcat-gagtcaagagttaagac |
103 |
Q |
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| T |
6274044 |
ttaaaataataattttggtgtccttgtaaaactgtgccctaggcgcggccgtccctcctgcccacgatgtagatcaactcattgagtcaagagttaagac |
6274143 |
T |
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| Q |
104 |
gtctaaggagtttgagaaattggttcaagttcaaatcttagcttcttagataatatgtgaatattaaacttcgtccttaaatatgtaaccatcaatcaac |
203 |
Q |
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| T |
6274144 |
gtctaaggagtttgagaaattggttcaagttcaaatcttagcttcttagataatatgtgaatattaaacttcgtccttgaatatgtaaccatcaatcaac |
6274243 |
T |
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| Q |
204 |
ttctttgaattttttcgaaatagtcaaactatttcttaatttgtttcacgcctatcaaatgagttcctccattaatatcaaatgttagacacattaacat |
303 |
Q |
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| T |
6274244 |
ttctttgaattttttcgaaatagtcaaactatttcttaatttgttgcacgcctatcaaatgagttcctccattaatatcaaatgttaggcacattaacat |
6274343 |
T |
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| Q |
304 |
gtgctgtaaaatactgacgtgtcgatctatgtcacttctcgcacaagacgagatcaatttaat |
366 |
Q |
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| T |
6274344 |
gtgttgtaaaatactaacgtgtcgatctatgtcacctctcgcacaagacgagatcaatttaat |
6274406 |
T |
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