View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1757-Insertion-23 (Length: 441)
Name: NF1757-Insertion-23
Description: NF1757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1757-Insertion-23 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 398; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 398; E-Value: 0
Query Start/End: Original strand, 8 - 441
Target Start/End: Original strand, 38616350 - 38616783
Alignment:
| Q |
8 |
tgagtcacatttaagatactgcaacaaagttggactgtttgctaaatttaactcagcacctcgacttatctgttttatactacctttctcacagctaaca |
107 |
Q |
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| T |
38616350 |
tgagtcacatttaagatactgcgacaaagtagtactgtttgctaaatttaactcagcacctcgacttatctgttttatactacctttctcacagctaaca |
38616449 |
T |
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| Q |
108 |
cattacattaacatagacgattttgtctactttgaaaaataagacatggtagaaaacatgctccacataaaagtactgataattagcacatgcttttact |
207 |
Q |
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| T |
38616450 |
cattacattaacatagacgattttgtctactttgaaaaataagacatggtagaaaacatgctccaaataaaagtactaataattagcacatgcttttact |
38616549 |
T |
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| Q |
208 |
ttagatgtatgaatatatgcaattgatctctattgcttgttattattcctggtgctgattgtttactatcaaatactaactggatatggctaagtgaaag |
307 |
Q |
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| T |
38616550 |
ttagatatatgaatatatgcaattgatctctattgcttgttattattcctggtgctgattgtttactatcaagtactaactggatatggctaagtgaaag |
38616649 |
T |
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| Q |
308 |
ggtacccgtccaggaagagatcgttcgccaagggtcgagagtaggtgtgtaaattctgcctctgcttcagccaacttctgatgcagactagctcttgatg |
407 |
Q |
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| T |
38616650 |
ggtacccgtccaggaagagatcgttcgccaagggtcaagagtaggtgtgtaaattctgcctctgcttcagccaacttctgatgcagactagctcttgatg |
38616749 |
T |
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| Q |
408 |
tatttgctctgtcaactttttccctgtaaacctc |
441 |
Q |
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| T |
38616750 |
tatttgctctgtcaacttttttcctgtaaacctc |
38616783 |
T |
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