View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1757-Insertion-7 (Length: 595)
Name: NF1757-Insertion-7
Description: NF1757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1757-Insertion-7 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 533; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 533; E-Value: 0
Query Start/End: Original strand, 8 - 595
Target Start/End: Complemental strand, 40057401 - 40056813
Alignment:
| Q |
8 |
gaaaagatctcatgacctcaagcagtcccttaggaaatggtacaaaagttttgacacttgcattttgaataatggttttagaaggtgagaggatgatggt |
107 |
Q |
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| T |
40057401 |
gaaaagatctcatgacctcaagcagtcccttaggaagtggtacaaaagttttgacacttgcattttgaataatggttttagaaggtgtgaggatgatggt |
40057302 |
T |
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| Q |
108 |
tttgttacctaaatgaaaccatacataaatatgtagactatatgattctcaaaatagatgacatgttgattgcatgcaacatcaaggaggaatttgataa |
207 |
Q |
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| T |
40057301 |
tttgttacctaaatgaaaccatgcataaatatgtagactatatgatcctcaaaatagatgacatgttgattgcatgcaacatcaaggaggaatttgataa |
40057202 |
T |
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| Q |
208 |
agtaaaactgatgctttaaattgaatttcaaatgaaggatatgagagctgcaagttaaattttggcaaagaagattcttagggacatatcaaagggaacg |
307 |
Q |
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| T |
40057201 |
agtaaaagtgatgctttaaattgaatttcaaatgaaggatatgagagctgcaagttaaattttggcaaagaagattcttagggacatatcaaagggaaca |
40057102 |
T |
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| Q |
308 |
tttttagatgcctaaaagatgcttgtgcttctgaagtgggtattctctacacaatggatgatggaagcaatggcagagttactagtttctggattcagat |
407 |
Q |
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| T |
40057101 |
tttttagatgcctaaaaggtgcttgtgcttctgaagtgggtattctctacacaatggatgatggaagcaatggcagagttactagtttgtggattcatat |
40057002 |
T |
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| Q |
408 |
tatgcactatgtgttaggtgattggaaattattttttcttttgacagaagataactaggaagttagtgcggtagttattctgttatcttctcat-acaat |
506 |
Q |
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| T |
40057001 |
tatgcactatgtgttaggtaattggaaattattttttcttttgacagaagataactaggaagttagtgcggtagttattctgttatcttcttataacaat |
40056902 |
T |
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| Q |
507 |
gtttaatctccaattgagaggcaagtgaatcttaagacttataaagagatgcaattcattctaatgagaactattcttttcctacatta |
595 |
Q |
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| T |
40056901 |
gtttaatctccaattgagaggcaagtgaatcttaagacttataaagagatgcaattcattctaatgagaactattcttttactacatta |
40056813 |
T |
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