View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17574_high_75 (Length: 222)
Name: NF17574_high_75
Description: NF17574
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17574_high_75 |
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Alignment Details
Target: chr2 (Bit Score: 146; Significance: 4e-77; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 18 - 203
Target Start/End: Complemental strand, 7209738 - 7209553
Alignment:
| Q |
18 |
atatttatcatatttgcaaaaaatatttagcctaaaaagattgttacatttagaatcaaatcattgaactttatagttaatgagctccactaaaatgaca |
117 |
Q |
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| T |
7209738 |
atatttatcatatttgcaaaaaatatttagcctaaaaagattgttacgtttagaatcaaatcattgaactttatagttaatgagctccaccaaaatgacg |
7209639 |
T |
|
| Q |
118 |
aattattcggtaaaatctgagttcgatgatcagacgttacatacctttggactgaactccaaattacaagatctcatttctatgac |
203 |
Q |
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| T |
7209638 |
aattatttagtaaaatttaagttcgatgatcaaacgttacatacctctggactgaactccaaattacaagatctcatttccatgac |
7209553 |
T |
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