View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17574_high_80 (Length: 202)
Name: NF17574_high_80
Description: NF17574
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17574_high_80 |
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Alignment Details
Target: chr7 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 14 - 188
Target Start/End: Original strand, 26978501 - 26978675
Alignment:
| Q |
14 |
aaaatgcaaagaaaaacaaaacatttaaactcaaatttcaattgaatctcatacgccttcttaaaatagtgatatatgtagactttcacagcatcccaca |
113 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26978501 |
aaaatgcaaagaaaaacaaaacatttaaactcaaattttaattgaatctcatacgccttcttaaaatagtgatatatgtagactttcacagcatcccaca |
26978600 |
T |
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| Q |
114 |
tgagttgcttgatctagcagcatgatcatgtacccaaagaacatgctgaatttacggctacataggagtcaaact |
188 |
Q |
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| T |
26978601 |
tgagttgcttgatctagcagcatgatcatgtacccaaagaacatgctgaatttacggctacataggagtcaaact |
26978675 |
T |
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