View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17576_high_43 (Length: 335)

Name: NF17576_high_43
Description: NF17576
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17576_high_43
NF17576_high_43
[»] chr7 (46 HSPs)
chr7 (224-335)||(22565980-22566091)
chr7 (34-223)||(17025943-17026138)
chr7 (54-214)||(10618035-10618195)
chr7 (36-206)||(18250594-18250769)
chr7 (37-205)||(35544118-35544290)
chr7 (61-205)||(45054811-45054960)
chr7 (34-181)||(33899551-33899698)
chr7 (86-215)||(23236780-23236909)
chr7 (39-215)||(18740810-18740986)
chr7 (61-181)||(26215764-26215884)
chr7 (61-181)||(3931321-3931442)
chr7 (61-181)||(37333744-37333865)
chr7 (80-215)||(7539643-7539783)
chr7 (61-181)||(36926456-36926576)
chr7 (61-181)||(42071567-42071687)
chr7 (61-179)||(666189-666307)
chr7 (47-181)||(8390097-8390231)
chr7 (61-181)||(5776538-5776658)
chr7 (61-181)||(43052329-43052449)
chr7 (54-181)||(222909-223036)
chr7 (61-181)||(7443876-7443996)
chr7 (61-181)||(11596405-11596520)
chr7 (50-205)||(48633267-48633422)
chr7 (63-181)||(8110806-8110924)
chr7 (85-205)||(36471827-36471946)
chr7 (60-181)||(20400220-20400340)
chr7 (61-158)||(49035038-49035135)
chr7 (86-214)||(41449161-41449289)
chr7 (85-224)||(33124097-33124231)
chr7 (85-215)||(22074574-22074704)
chr7 (61-113)||(388530-388582)
chr7 (61-113)||(3941792-3941844)
chr7 (53-112)||(27232373-27232432)
chr7 (61-113)||(15433732-15433784)
chr7 (61-113)||(28950278-28950330)
chr7 (53-112)||(37106263-37106322)
chr7 (80-113)||(5795498-5795531)
chr7 (85-178)||(30918980-30919073)
chr7 (85-181)||(32043282-32043378)
chr7 (153-212)||(26719170-26719229)
chr7 (34-113)||(26719257-26719336)
chr7 (53-104)||(32239580-32239631)
chr7 (53-112)||(37402001-37402060)
chr7 (61-110)||(17608146-17608195)
chr7 (128-181)||(20259970-20260023)
chr7 (61-106)||(45174736-45174781)
[»] chr5 (42 HSPs)
chr5 (34-215)||(10493387-10493568)
chr5 (29-214)||(26299455-26299631)
chr5 (61-181)||(4983938-4984058)
chr5 (88-215)||(26217431-26217563)
chr5 (80-215)||(27450982-27451122)
chr5 (29-182)||(39408765-39408904)
chr5 (61-215)||(41782707-41782861)
chr5 (34-205)||(27195441-27195617)
chr5 (80-215)||(34724031-34724171)
chr5 (52-215)||(43385806-43385975)
chr5 (85-181)||(1840974-1841070)
chr5 (80-215)||(34720055-34720195)
chr5 (61-215)||(5385062-5385221)
chr5 (61-215)||(11136636-11136795)
chr5 (80-182)||(19715819-19715920)
chr5 (29-182)||(26297951-26298090)
chr5 (29-182)||(39407027-39407166)
chr5 (61-181)||(18879667-18879787)
chr5 (57-188)||(28430589-28430721)
chr5 (63-215)||(28242398-28242550)
chr5 (61-181)||(32157358-32157478)
chr5 (29-223)||(34856946-34857127)
chr5 (61-181)||(15931984-15932104)
chr5 (57-181)||(19283554-19283677)
chr5 (61-181)||(27905527-27905647)
chr5 (57-181)||(40057779-40057904)
chr5 (61-113)||(22921546-22921598)
chr5 (53-112)||(20191199-20191258)
chr5 (61-157)||(1224635-1224731)
chr5 (61-113)||(29322166-29322218)
chr5 (61-113)||(38523230-38523282)
chr5 (53-215)||(2675310-2675475)
chr5 (128-181)||(3805413-3805466)
chr5 (29-66)||(27450945-27450982)
chr5 (29-66)||(34720018-34720055)
chr5 (29-66)||(34723994-34724031)
chr5 (88-205)||(39413367-39413484)
chr5 (53-112)||(20188466-20188525)
chr5 (29-59)||(19715927-19715957)
chr5 (165-202)||(2770996-2771033)
chr5 (140-181)||(14501398-14501439)
chr5 (29-66)||(34725103-34725140)
[»] chr4 (47 HSPs)
chr4 (31-176)||(24009378-24009518)
chr4 (56-205)||(44377628-44377777)
chr4 (61-181)||(9469474-9469594)
chr4 (61-181)||(19850179-19850299)
chr4 (61-181)||(49820425-49820545)
chr4 (61-214)||(28266717-28266870)
chr4 (61-225)||(52705591-52705760)
chr4 (61-181)||(50605502-50605622)
chr4 (90-204)||(50711443-50711557)
chr4 (61-178)||(53369112-53369229)
chr4 (61-181)||(4275515-4275635)
chr4 (61-181)||(21436354-21436474)
chr4 (39-178)||(46945126-46945265)
chr4 (34-214)||(12673613-12673799)
chr4 (84-181)||(50240890-50240987)
chr4 (61-204)||(51409087-51409235)
chr4 (29-182)||(1803213-1803352)
chr4 (85-199)||(16743116-16743230)
chr4 (61-181)||(48977051-48977171)
chr4 (60-181)||(43386581-43386702)
chr4 (61-157)||(36543365-36543461)
chr4 (53-215)||(54625743-54625902)
chr4 (86-181)||(40797201-40797296)
chr4 (54-181)||(52813046-52813173)
chr4 (53-214)||(48340211-48340373)
chr4 (61-113)||(44792766-44792818)
chr4 (34-145)||(9222733-9222844)
chr4 (54-181)||(22183810-22183937)
chr4 (53-112)||(36156875-36156934)
chr4 (61-112)||(43812649-43812700)
chr4 (86-188)||(48151735-48151837)
chr4 (139-215)||(7505432-7505513)
chr4 (54-111)||(38791127-38791184)
chr4 (128-181)||(51994130-51994183)
chr4 (138-202)||(9874603-9874667)
chr4 (61-113)||(45674407-45674459)
chr4 (154-205)||(38791085-38791136)
chr4 (151-214)||(49084686-49084749)
chr4 (80-113)||(12790150-12790183)
chr4 (100-181)||(25133980-25134061)
chr4 (61-114)||(50147320-50147373)
chr4 (53-113)||(54742200-54742260)
chr4 (61-112)||(32398350-32398401)
chr4 (135-205)||(27890640-27890710)
chr4 (80-150)||(55892670-55892740)
chr4 (53-106)||(27890726-27890779)
chr4 (60-112)||(18990308-18990360)
[»] chr1 (47 HSPs)
chr1 (34-215)||(24575308-24575494)
chr1 (61-215)||(43090005-43090159)
chr1 (29-178)||(7994796-7994944)
chr1 (34-215)||(5205055-5205242)
chr1 (63-181)||(37441788-37441906)
chr1 (34-181)||(15257792-15257939)
chr1 (34-181)||(29678050-29678197)
chr1 (85-215)||(44595837-44595966)
chr1 (61-181)||(36418567-36418687)
chr1 (86-215)||(7955657-7955791)
chr1 (85-205)||(3576961-3577081)
chr1 (34-112)||(28005822-28005900)
chr1 (85-215)||(47982674-47982803)
chr1 (125-190)||(42936351-42936416)
chr1 (132-215)||(573276-573359)
chr1 (53-215)||(21681587-21681754)
chr1 (53-112)||(46265573-46265632)
chr1 (71-181)||(32179380-32179490)
chr1 (61-183)||(35309053-35309171)
chr1 (85-214)||(36118239-36118367)
chr1 (107-215)||(38061638-38061751)
chr1 (61-113)||(24470499-24470551)
chr1 (53-112)||(42916731-42916790)
chr1 (53-111)||(15662407-15662465)
chr1 (88-182)||(30211808-30211902)
chr1 (85-205)||(31868907-31869032)
chr1 (80-145)||(38061582-38061647)
chr1 (61-113)||(25125386-25125438)
chr1 (61-181)||(45654340-45654460)
chr1 (53-112)||(14578996-14579055)
chr1 (53-112)||(35810226-35810284)
chr1 (35-105)||(42936278-42936348)
chr1 (29-66)||(38061545-38061582)
chr1 (60-112)||(7595836-7595888)
chr1 (53-113)||(15014119-15014179)
chr1 (137-181)||(28005782-28005826)
chr1 (149-205)||(40160347-40160403)
chr1 (53-113)||(42936612-42936672)
chr1 (81-181)||(45582092-45582192)
chr1 (61-157)||(48575709-48575805)
chr1 (138-181)||(13645766-13645809)
chr1 (172-215)||(15014023-15014066)
chr1 (53-112)||(23916246-23916305)
chr1 (169-214)||(35634966-35635011)
chr1 (137-182)||(50445528-50445573)
chr1 (61-113)||(14770836-14770888)
chr1 (142-178)||(47603463-47603499)
[»] scaffold0444 (1 HSPs)
scaffold0444 (56-205)||(1381-1530)
[»] chr3 (36 HSPs)
chr3 (45-215)||(7834070-7834242)
chr3 (55-215)||(25252882-25253047)
chr3 (88-215)||(5418051-5418183)
chr3 (34-181)||(12710107-12710254)
chr3 (63-181)||(39471054-39471172)
chr3 (45-214)||(7521697-7521866)
chr3 (77-181)||(33895963-33896067)
chr3 (52-181)||(39943696-39943825)
chr3 (61-181)||(32688606-32688726)
chr3 (88-179)||(30740781-30740872)
chr3 (44-178)||(40942945-40943078)
chr3 (45-179)||(20661724-20661858)
chr3 (36-145)||(54432839-54432948)
chr3 (34-182)||(30662709-30662857)
chr3 (34-150)||(26050078-26050196)
chr3 (80-224)||(46294229-46294378)
chr3 (85-181)||(7029182-7029277)
chr3 (84-224)||(19561403-19561543)
chr3 (53-112)||(33439208-33439267)
chr3 (54-181)||(38644191-38644317)
chr3 (53-112)||(54394018-54394077)
chr3 (68-190)||(33152038-33152160)
chr3 (137-190)||(8086983-8087036)
chr3 (61-113)||(23206910-23206962)
chr3 (54-158)||(52198846-52198950)
chr3 (128-181)||(20407790-20407843)
chr3 (128-181)||(31085526-31085579)
chr3 (136-215)||(27040592-27040676)
chr3 (137-181)||(39133825-39133869)
chr3 (53-112)||(45994906-45994965)
chr3 (57-190)||(9505820-9505943)
chr3 (82-112)||(53530151-53530181)
chr3 (91-188)||(15823183-15823280)
chr3 (34-75)||(20552016-20552057)
chr3 (146-215)||(25633823-25633892)
chr3 (138-182)||(2868844-2868888)
[»] chr6 (20 HSPs)
chr6 (61-206)||(33109849-33109999)
chr6 (58-190)||(12428081-12428213)
chr6 (34-181)||(13311395-13311542)
chr6 (63-181)||(7957101-7957219)
chr6 (61-181)||(10346259-10346379)
chr6 (36-181)||(7436747-7436891)
chr6 (88-190)||(9463696-9463797)
chr6 (61-181)||(18961892-18962012)
chr6 (60-205)||(25181137-25181282)
chr6 (34-158)||(3082277-3082401)
chr6 (53-133)||(10962387-10962467)
chr6 (54-181)||(472873-473000)
chr6 (54-113)||(6998662-6998721)
chr6 (53-108)||(5641177-5641232)
chr6 (61-112)||(27925506-27925557)
chr6 (88-178)||(22295406-22295496)
chr6 (61-205)||(26643911-26644056)
chr6 (61-205)||(26749877-26750022)
chr6 (90-206)||(8597406-8597521)
chr6 (137-181)||(6998623-6998667)
[»] chr2 (27 HSPs)
chr2 (61-183)||(41958592-41958714)
chr2 (61-224)||(2647573-2647741)
chr2 (61-181)||(36538124-36538244)
chr2 (34-151)||(1093959-1094076)
chr2 (61-181)||(27633189-27633309)
chr2 (85-205)||(40675188-40675308)
chr2 (80-183)||(12139411-12139514)
chr2 (81-181)||(20986111-20986211)
chr2 (86-178)||(3409847-3409939)
chr2 (96-179)||(29804312-29804395)
chr2 (96-214)||(41648752-41648875)
chr2 (54-181)||(44741262-44741389)
chr2 (53-215)||(38410203-38410365)
chr2 (34-188)||(40458372-40458526)
chr2 (53-112)||(30711567-30711626)
chr2 (61-112)||(33164537-33164588)
chr2 (53-112)||(34116718-34116777)
chr2 (56-113)||(33830993-33831050)
chr2 (53-113)||(20204353-20204413)
chr2 (61-113)||(34064244-34064296)
chr2 (54-113)||(33475737-33475796)
chr2 (53-112)||(39689671-39689730)
chr2 (82-226)||(11027284-11027433)
chr2 (80-181)||(39801168-39801269)
chr2 (61-181)||(26435814-26435934)
chr2 (173-215)||(1093922-1093964)
chr2 (85-202)||(37071206-37071323)
[»] chr8 (19 HSPs)
chr8 (61-205)||(43966900-43967049)
chr8 (31-181)||(12377768-12377918)
chr8 (87-215)||(25731853-25731981)
chr8 (86-181)||(9413262-9413357)
chr8 (60-158)||(22563328-22563426)
chr8 (138-215)||(13784218-13784295)
chr8 (80-178)||(11161128-11161226)
chr8 (137-223)||(22930898-22930984)
chr8 (137-178)||(17865723-17865764)
chr8 (61-149)||(24854058-24854146)
chr8 (86-181)||(39477465-39477559)
chr8 (81-123)||(1091184-1091226)
chr8 (93-194)||(9133426-9133528)
chr8 (61-108)||(453058-453105)
chr8 (61-112)||(23180865-23180916)
chr8 (137-214)||(15211954-15212031)
chr8 (53-105)||(13521961-13522013)
chr8 (53-105)||(13611496-13611548)
chr8 (60-112)||(27189526-27189578)
[»] scaffold0316 (1 HSPs)
scaffold0316 (61-181)||(18757-18877)
[»] scaffold0106 (1 HSPs)
scaffold0106 (128-181)||(26540-26593)
[»] scaffold0224 (1 HSPs)
scaffold0224 (53-112)||(7925-7984)
[»] scaffold0135 (1 HSPs)
scaffold0135 (34-145)||(33386-33497)
[»] scaffold0746 (1 HSPs)
scaffold0746 (135-215)||(5333-5413)
[»] scaffold0170 (1 HSPs)
scaffold0170 (85-173)||(4518-4606)
[»] scaffold0025 (1 HSPs)
scaffold0025 (90-158)||(4748-4816)
[»] scaffold0658 (1 HSPs)
scaffold0658 (61-106)||(6377-6422)


Alignment Details
Target: chr7 (Bit Score: 108; Significance: 3e-54; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 224 - 335
Target Start/End: Complemental strand, 22566091 - 22565980
Alignment:
Q  224 accctgactaaagcatgagtcttctcattttgtttgtctcatacttttataacaatagtttgttaaacaagaagaaacaaaatctctacaataatataag 323  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22566091 accctgactaaagcatgagtcttctcattttgtttgtctcatacttttataataatagtttgttaaacaagaagaaacaaaatctctacaataatataag 22565992  T
Q  324 aaaaattaaaat 335  Q
    ||||||||||||    
T  22565991 aaaaattaaaat 22565980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 34 - 223
Target Start/End: Original strand, 17025943 - 17026138
Alignment:
Q  34 tgaaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaagg-ttcg 132  Q
    |||| ||||||||||||||| ||||||||||||||| ||| | || |||  |||||| |||||||||||||||||||||| |  |||||| || | ||||    
T  17025943 tgaagtatacaattcgagtagacgagttgaacctaacgagtcgaaccgagttgttcgcgaactttaaacgagccgaactcgagttaaaaaaaaagattcg 17026042  T
Q  133 ttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaa-----ctcagacaagtttgactcgactcggctcatttcaagtccta 223  Q
    |||  ||||||||||||||||||||| ||||||||| ||||||||||||      |||||||||||| ||||||||||| |||||||| |||||||    
T  17026043 tttcaaactcgagtcgagtttcgagccgaaccaattcttatcgagtcgagtcgagctcagacaagttcgactcgactcgactcatttccagtccta 17026138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 54 - 214
Target Start/End: Complemental strand, 10618195 - 10618035
Alignment:
Q  54 aacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagttt 153  Q
    |||||||||||||||| ||| | ||  ||  |||||||||||||||||||||||||||||||  |||||| ||||||| | | | |||||||||||||||    
T  10618195 aacgagttgaacctaacgaggcgaactgagttgttcgtgaactttaaacgagccgaactcaagttaaaaaaaaggttcatatcgcactcgagtcgagttt 10618096  T
Q  154 cgagctgaaccaatttttatcgagtcgaactcagacaagtttgactcgactcggctcattt 214  Q
    ||| | |||||||||||||||||||| || ||||||| ||| || |||||||| |||||||    
T  10618095 cgaaccgaaccaatttttatcgagtccaattcagacaggttcgattcgactcgactcattt 10618035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 36 - 206
Target Start/End: Original strand, 18250594 - 18250769
Alignment:
Q  36 aaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttt 135  Q
    |||||||||||| |||||  | |||||||||||| ||| | || |||||||||||||||||||||||||||||||||| |  || | | |||||||||||    
T  18250594 aaatatacaatttgagtaggcaagttgaacctaacgagtcgaaccgaactgttcgtgaactttaaacgagccgaactcgagttagagaaaaggttcgttt 18250693  T
Q  136 tgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaa-----ctcagacaagtttgactcgactcg 206  Q
      |||||||||| |||||||||| ||||||||| ||||||||||||      |||| |||||||||||||||||||    
T  18250694 caaactcgagtcaagtttcgagccgaaccaattcttatcgagtcgagtcgagctcaaacaagtttgactcgactcg 18250769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 37 - 205
Target Start/End: Original strand, 35544118 - 35544290
Alignment:
Q  37 aatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgtttt 136  Q
    |||||| ||||||||||  ||| |||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||  || | | || ||| ||||     
T  35544118 aatatataattcgagtaggcgaattgaacctaacgagccaaaccgagctgttcgtgaactttaaacgagccgaactcaagttagaga-aatgtttgtttc 35544216  T
Q  137 gaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaa-----ctcagacaagtttgactcgactc 205  Q
     ||||| | ||||||||||||| ||||||||| |||||||||||||     |||||||| ||||||||||||||    
T  35544217 aaactcaaatcgagtttcgagccgaaccaattcttatcgagtcgaatcgagctcagacatgtttgactcgactc 35544290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 61 - 205
Target Start/End: Complemental strand, 45054960 - 45054811
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||||| || |||  || |||||||||||||||||||||||||| | |  |||| |||||||||||||||||||||||||||||| ||| |    
T  45054960 tgaacctaacgagccgaaccgagttgctcgtgaactttaaacgagccgaactcgagcccaaaaaaaggttcgttttgaactcgagtcgagtttcaagccg 45054861  T
Q  161 aaccaatttttatcgagtcg-----aactcagacaagtttgactcgactc 205  Q
    |||||||| |||||||||||     | |||||||||||| ||||||||||    
T  45054860 aaccaattcttatcgagtcgagccaagctcagacaagttcgactcgactc 45054811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 34 - 181
Target Start/End: Original strand, 33899551 - 33899698
Alignment:
Q  34 tgaaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgt 133  Q
    |||||||| ||||| ||| ||| ||||||||||||| ||| | || |||   |||||||||||||||||||||||||||| | ||| ||| |||||||||    
T  33899551 tgaaatatgcaatttgagcaaatgagttgaacctaacgagtcgaaccgagtggttcgtgaactttaaacgagccgaactcgagctagaaaaaaggttcgt 33899650  T
Q  134 tttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcga 181  Q
    ||||||| |||  |||||||||||| ||| ||||| ||||||||||||    
T  33899651 tttgaacccgaaccgagtttcgagccgaatcaattcttatcgagtcga 33899698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 86 - 215
Target Start/End: Original strand, 23236780 - 23236909
Alignment:
Q  86 gttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaactc 185  Q
    |||||||||||||||||||||||||||||| ||| ||| ||||||||| ||||| | |||||||||||||||| || | |||| |||||||||||| |||    
T  23236780 gttcgtgaactttaaacgagccgaactcaagctagaaaaaaggttcgtattgaatttgagtcgagtttcgagccgagctaattcttatcgagtcgagctc 23236879  T
Q  186 agacaagtttgactcgactcggctcatttc 215  Q
    |||  |||| |  |||||||| ||||||||    
T  23236880 agatgagttcggttcgactcgactcatttc 23236909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 39 - 215
Target Start/End: Original strand, 18740810 - 18740986
Alignment:
Q  39 tatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttga 138  Q
    ||||||||||||||| |||| |||||||||| ||||| || |||  ||||||||||||||||||||| ||||||| |  | |||| ||| || ||||  |    
T  18740810 tatacaattcgagtagacgaattgaacctaacgagccgaaccgagttgttcgtgaactttaaacgagtcgaactcgagtttaaaaaaagatttgtttcaa 18740909  T
Q  139 actcgagtcgagtttcgagctgaaccaatttttatcgagtcgaactcagacaagtttgactcgactcggctcatttc 215  Q
    ||||||||||||||  || | ||| ||||| |||||||||||| || ||| | ||| ||||||||||| ||||||||    
T  18740910 actcgagtcgagttatgaaccgaatcaattcttatcgagtcgagcttagagaggttcgactcgactcgactcatttc 18740986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 26215884 - 26215764
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||| |||| |||||||||||||||||||||||||||||||||| |  | |||| |  |||||| | ||||||||| |||||||||||| |    
T  26215884 tgaacctaacgagtcaaaccgaactgttcgtgaactttaaacgagccgaactcgagttgaaaaaatagttcgtgtcgaactcgagccgagtttcgagccg 26215785  T
Q  161 aaccaatttttatcgagtcga 181  Q
    |||||||| ||||||||||||    
T  26215784 aaccaattcttatcgagtcga 26215764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 3931321 - 3931442
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatct-aaaaagaaggttcgttttgaactcgagtcgagtttcgagct 159  Q
    ||||||||| ||||| || ||||||||||||||||||||||||||| |||||| | || ||||| |  |||||| | ||||||||| ||||||||||||     
T  3931321 tgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagctgaactcgagctgaaaaaaatagttcgtgtcgaactcgagccgagtttcgagcc 3931420  T
Q  160 gaaccaatttttatcgagtcga 181  Q
    ||||||||| ||||||||||||    
T  3931421 gaaccaattcttatcgagtcga 3931442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 37333865 - 37333744
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatct-aaaaagaaggttcgttttgaactcgagtcgagtttcgagct 159  Q
    ||||||||| ||||| || |||||||||||||||||||||||||||||||||| | || ||||| |  |||| | | ||||||||| ||||||||||||     
T  37333865 tgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaaatagttcatatcgaactcgagccgagtttcgagcc 37333766  T
Q  160 gaaccaatttttatcgagtcga 181  Q
    ||||||||| ||||||||||||    
T  37333765 gaaccaattcttatcgagtcga 37333744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 7539643 - 7539783
Alignment:
Q  80 cgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtc 179  Q
    |||||||||||| ||||||||||||||||||||| | || |||| ||  ||||  | ||||||||| |||||||||||||||||||||| ||||||||||    
T  7539643 cgaactgttcgtaaactttaaacgagccgaactcgagctgaaaaaaaaattcgagtcgaactcgagccgagtttcgagctgaaccaattcttatcgagtc 7539742  T
Q  180 gaac-----tcagacaagtttgactcgactcggctcatttc 215  Q
    || |     |||||| |||| ||||| ||||||||||||||    
T  7539743 gagccgagctcagacgagttcgactcaactcggctcatttc 7539783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 36926576 - 36926456
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||||| |||||||||||||||||| |||||| ||||||||||| |  | |||| |  |||||| | ||||||||| |||||||||||| |    
T  36926576 tgaacctaacgagccgaatcgaactgttcgtgaattttaaatgagccgaactcgagatgaaaaaatagttcgtgtcgaactcgagccgagtttcgagccg 36926477  T
Q  161 aaccaatttttatcgagtcga 181  Q
    |||||||| ||||||||||||    
T  36926476 aaccaattcttatcgagtcga 36926456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 42071687 - 42071567
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||| | || |||||||||||||||||||||||||||||||||| | || |||| |  |||||| | ||||||||| |||||||||||| |    
T  42071687 tgaacctaacgagtcgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgagtttcgagccg 42071588  T
Q  161 aaccaatttttatcgagtcga 181  Q
    |||||||| |||| |||||||    
T  42071587 aaccaattcttattgagtcga 42071567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 179
Target Start/End: Original strand, 666189 - 666307
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||||| || |||||||||||||||||||||||||||||||||  | || |||| |  ||| || | ||||||||| |||||||||||| |    
T  666189 tgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaacttgagctgaaaaaatagtttgtgtcgaactcgagccgagtttcgagccg 666288  T
Q  161 aaccaatttttatcgagtc 179  Q
    |||||||| ||||||||||    
T  666289 aaccaattcttatcgagtc 666307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 181
Target Start/End: Original strand, 8390097 - 8390231
Alignment:
Q  47 tcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagt 146  Q
    ||||| ||||||||||||||||| ||||| || |||  ||||||||||| ||||||||||| ||||| | |||| || |||||| || | ||| ||||||    
T  8390097 tcgagcaaacgagttgaacctaacgagccgaaccgagttgttcgtgaacattaaacgagccaaactcgagctaagaaaaaggtttgtatcgaattcgagt 8390196  T
Q  147 cgagtttcgagctgaaccaatttttatcgagtcga 181  Q
     |||||||||||||| || ||| ||||||||||||    
T  8390197 tgagtttcgagctgagccgattcttatcgagtcga 8390231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 5776538 - 5776658
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||||| || |||| |||||||||| |||||||||||||||||| | || |||| |  |||| | | ||||||||| ||||||||||||||    
T  5776538 tgaacctaacgagccgaaccgaattgttcgtgaattttaaacgagccgaactcgagctgaaaaaatagttcttgtcgaactcgagccgagtttcgagctg 5776637  T
Q  161 aaccaatttttatcgagtcga 181  Q
    ||| |||| ||||||||||||    
T  5776638 aactaattcttatcgagtcga 5776658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 43052449 - 43052329
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||||| ||  ||||||||||||||||||||| ||||||||||| | || |||| |  |||||| | ||||||||| | |||||||||| |    
T  43052449 tgaacctaacgagccgaactgaactgttcgtgaactttaaatgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagccaagtttcgagccg 43052350  T
Q  161 aaccaatttttatcgagtcga 181  Q
    |||||||| ||||||||||||    
T  43052349 aaccaattcttatcgagtcga 43052329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 54 - 181
Target Start/End: Original strand, 222909 - 223036
Alignment:
Q  54 aacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagttt 153  Q
    ||||| |||||||||| ||||| || ||||||||||||||| |||||||||| | || || | || |||| |  |||||| | |||||||||||||||||    
T  222909 aacgaattgaacctaacgagccgaaccgaactgttcgtgaattttaaacgagtcaaattcgagctgaaaaaagagttcgtgtcgaactcgagtcgagttt 223008  T
Q  154 cgagctgaaccaatttttatcgagtcga 181  Q
    ||||| || | |||||||||||||||||    
T  223009 cgagccgagcaaatttttatcgagtcga 223036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 7443996 - 7443876
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    |||||||||  ||||||| |||||||||||||||| |||||||||| |||||| | || |||| |  ||| || | ||||||||| |||||||||| | |    
T  7443996 tgaacctaacaagccaaaccgaactgttcgtgaacattaaacgagctgaactcgagctgaaaaaatagtttgtgtcgaactcgagccgagtttcgaaccg 7443897  T
Q  161 aaccaatttttatcgagtcga 181  Q
    |||||||| ||||||||||||    
T  7443896 aaccaattcttatcgagtcga 7443876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 11596405 - 11596520
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||||| || |||  || ||||||||||||||||||||||| || | |  |||| ||||||||||||||||     |||||||||||||||    
T  11596405 tgaacctaacgagccgaaccgagttgctcgtgaactttaaacgagccgaaatcgagcccaaaaaaaggttcgttttgaac-----tcgagtttcgagctg 11596499  T
Q  161 aaccaatttttatcgagtcga 181  Q
    |||||||| ||||||||||||    
T  11596500 aaccaattcttatcgagtcga 11596520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 205
Target Start/End: Complemental strand, 48633422 - 48633267
Alignment:
Q  50 agtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcga 149  Q
    ||||||||| |||||||||| ||  | ||||||  || |||||||| |||||||||||| |||| |  |||||| |||||| || | |||||||||| ||    
T  48633422 agtaaacgatttgaacctaacgaatcgaatcgagttgctcgtgaacattaaacgagccggactcgagttaaaaaaaaggttagtatcgaactcgagttga 48633323  T
Q  150 gtttcgagctgaaccaatttttatcgagtcgaactcagacaagtttgactcgactc 205  Q
    |||| ||||||| |  |||  ||||||||||| ||||||| |||| ||||||||||    
T  48633322 gttttgagctgagctgattcatatcgagtcgagctcagacgagttcgactcgactc 48633267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 63 - 181
Target Start/End: Complemental strand, 8110924 - 8110806
Alignment:
Q  63 aacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaa 162  Q
    ||||||||||| | |||||||||||| ||||||||||||||||| |||||| | || |||| |  |||||| | ||||||||| |||||||| ||||| |    
T  8110924 aacctaatgagtcgaatcgaactgtttgtgaactttaaacgagctgaactcgagctgaaaaaagagttcgtgtcgaactcgagccgagtttcaagctgga 8110825  T
Q  163 ccaatttttatcgagtcga 181  Q
     ||||| ||||| ||||||    
T  8110824 acaattcttatcaagtcga 8110806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 85 - 205
Target Start/End: Complemental strand, 36471946 - 36471827
Alignment:
Q  85 tgttcgtgaactttaaacgagccgaactc-aatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaac 183  Q
    ||||||| || |||||| ||||||||||| ||| ||||||  ||||| |||| ||||| ||||||||||| |||| ||| ||||| |||||||||||| |    
T  36471946 tgttcgtaaattttaaatgagccgaactcgaatttaaaaa--aggtttgtttcgaacttgagtcgagttttgagccgaatcaattcttatcgagtcgagc 36471849  T
Q  184 tcagacaagtttgactcgactc 205  Q
    ||||||| ||| ||||||||||    
T  36471848 tcagacaggttcgactcgactc 36471827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 60 - 181
Target Start/End: Complemental strand, 20400340 - 20400220
Alignment:
Q  60 ttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagct 159  Q
    |||||||||| ||| |||| |||||| ||||||||||||||||||||| ||||| | ||||||| | |||| || | ||||||||  |||||||| ||||    
T  20400340 ttgaacctaacgagtcaaaccgaactattcgtgaactttaaacgagccaaactcgagctaaaaa-atggtttgtgtcgaactcgaaccgagtttcaagct 20400242  T
Q  160 gaaccaatttttatcgagtcga 181  Q
    ||||||| | ||| ||||||||    
T  20400241 gaaccaaatattaccgagtcga 20400220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 49035038 - 49035135
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagc 158  Q
    ||||||||| ||||| ||||||||||||||||||| ||||| ||| ||||||| | ||||||| |  |||||| |  |||||||||||||||||||||    
T  49035038 tgaacctaacgagccgaatcgaactgttcgtgaaccttaaaagagtcgaactcgagctaaaaaaagagttcgtgtcaaactcgagtcgagtttcgagc 49035135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 214
Target Start/End: Complemental strand, 41449289 - 41449161
Alignment:
Q  86 gttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaactc 185  Q
    ||||||||||||||||||||| |||||| | ||| ||| |||||| || | ||| ||||||||| |||||||| || |||||| |||||||||||| ||     
T  41449289 gttcgtgaactttaaacgagctgaactcgagctagaaaaaaggtttgtatcgaattcgagtcgaatttcgagccgagccaattcttatcgagtcgagctt 41449190  T
Q  186 agacaagtttgactcgactcggctcattt 214  Q
    |||  |||| |  |||||||| |||||||    
T  41449189 agatgagttcggttcgactcgactcattt 41449161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 85 - 224
Target Start/End: Complemental strand, 33124231 - 33124097
Alignment:
Q  85 tgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaact 184  Q
    ||||||||||||||||||||||||||||| |  |||||  ||||||||| ||||||||||||     |||||||  | | |||| |||||||||||| ||    
T  33124231 tgttcgtgaactttaaacgagccgaactcgagttaaaagaaaggttcgtattgaactcgagt-----ttcgagccaagctaattcttatcgagtcgagct 33124137  T
Q  185 cagacaagtttgactcgactcggctcatttcaagtcctaa 224  Q
    ||||| |||| || | |||||| |||||||  ||||||||    
T  33124136 cagacgagttcgatttgactcgactcattttcagtcctaa 33124097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 215
Target Start/End: Complemental strand, 22074704 - 22074574
Alignment:
Q  85 tgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaact 184  Q
    |||||||||| ||||||||||||||| |  | | | ||| || |||| | | |||||||||||||||||||||| ||||||||| |||||||||| | ||    
T  22074704 tgttcgtgaattttaaacgagccgaatttgagccataaaaaaagttcatatcgaactcgagtcgagtttcgagccgaaccaattcttatcgagtctagct 22074605  T
Q  185 cagacaagtttgactcgactcggctcatttc 215  Q
    |||| | ||| ||||| ||||| | ||||||    
T  22074604 cagataggttcgactcaactcgacccatttc 22074574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 388582 - 388530
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactc 113  Q
    ||||||||| ||||| || ||||||||||||||||||||||||||||||||||    
T  388582 tgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactc 388530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 3941844 - 3941792
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactc 113  Q
    ||||||||||||||| || | ||||||||||||||||||||||||||||||||    
T  3941844 tgaacctaatgagccgaaccaaactgttcgtgaactttaaacgagccgaactc 3941792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 27232373 - 27232432
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaact 112  Q
    |||||| |||||||||||||||| || | || ||||||||||||||||||||||||||||    
T  27232373 aaacgaattgaacctaatgagccgaaccaaattgttcgtgaactttaaacgagccgaact 27232432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 15433784 - 15433732
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactc 113  Q
    ||||||||| ||||| || |||||||||| |||||||||||||||||||||||    
T  15433784 tgaacctaacgagccgaaccgaactgttcatgaactttaaacgagccgaactc 15433732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 28950278 - 28950330
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactc 113  Q
    ||||||||| ||||  || ||||||||||||||||||||||||||||||||||    
T  28950278 tgaacctaacgagctgaaccgaactgttcgtgaactttaaacgagccgaactc 28950330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 112
Target Start/End: Complemental strand, 37106322 - 37106263
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaact 112  Q
    |||||| || ||||||||||||| || | |||||||||||||||||||| ||||||||||    
T  37106322 aaacgaatttaacctaatgagccgaaccaaactgttcgtgaactttaaatgagccgaact 37106263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 80 - 113
Target Start/End: Original strand, 5795498 - 5795531
Alignment:
Q  80 cgaactgttcgtgaactttaaacgagccgaactc 113  Q
    ||||||||||||||||||||||||||||||||||    
T  5795498 cgaactgttcgtgaactttaaacgagccgaactc 5795531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 85 - 178
Target Start/End: Complemental strand, 30919073 - 30918980
Alignment:
Q  85 tgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagt 178  Q
    |||| |||||||||||| |||| |||||  |  ||| || ||||||||||| || | ||| | ||||||||||||||||||||| |||||||||    
T  30919073 tgtttgtgaactttaaatgagctgaacttgagttaagaaaaaggttcgtttcgatcacgatttgagtttcgagctgaaccaattcttatcgagt 30918980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 181
Target Start/End: Original strand, 32043282 - 32043378
Alignment:
Q  85 tgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcga 181  Q
    ||||| ||||||||||||||| | ||||| |  |||||| ||| || || |  ||||| ||||||||||| || |||| ||||||||||||||||||    
T  32043282 tgttcttgaactttaaacgagtcaaactcgagttaaaaaaaagatttgtatcaaactcaagtcgagtttcaagatgaatcaatttttatcgagtcga 32043378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 153 - 212
Target Start/End: Complemental strand, 26719229 - 26719170
Alignment:
Q  153 tcgagctgaaccaatttttatcgagtcgaactcagacaagtttgactcgactcggctcat 212  Q
    |||||| ||||||||| |||||||||||| ||||||||  || ||||||||||| |||||    
T  26719229 tcgagccgaaccaattcttatcgagtcgagctcagacagattcgactcgactcgactcat 26719170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 26719336 - 26719257
Alignment:
Q  34 tgaaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactc 113  Q
    |||||||| ||||| ||| ||| ||| ||||||||| ||| | || |||   ||||||||||||||||||||||||||||    
T  26719336 tgaaatatgcaatttgagcaaatgaggtgaacctaacgagtcgaaccgagtggttcgtgaactttaaacgagccgaactc 26719257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 104
Target Start/End: Complemental strand, 32239631 - 32239580
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacga 104  Q
    |||||| ||||| ||||||||||||| | ||||||| |||||||||||||||    
T  32239631 aaacgaattgaatctaatgagccaaaccaaactgttagtgaactttaaacga 32239580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 37402001 - 37402060
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaact 112  Q
    |||||| |||||||||||||| | || | |||||||||||||||||||| | ||||||||    
T  37402001 aaacgaattgaacctaatgagtcgaaccaaactgttcgtgaactttaaaagcgccgaact 37402060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 17608195 - 17608146
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaa 110  Q
    |||||||||||||   |||| ||||||||||||||||||| |||||||||    
T  17608195 tgaacctaatgagttgaatcaaactgttcgtgaactttaagcgagccgaa 17608146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 20259970 - 20260023
Alignment:
Q  128 gttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcga 181  Q
    |||||| | ||||||||| |||||||  ||||||||||||| ||||||||||||    
T  20259970 gttcgtgtcgaactcgagccgagttttaagctgaaccaattcttatcgagtcga 20260023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 45174781 - 45174736
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagc 106  Q
    ||||||||| ||||| || |||| ||||||||||||||||||||||    
T  45174781 tgaacctaacgagccgaaccgaattgttcgtgaactttaaacgagc 45174736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 2e-43; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 34 - 215
Target Start/End: Complemental strand, 10493568 - 10493387
Alignment:
Q  34 tgaaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgt 133  Q
    |||||||| ||||| ||| ||||||||||||||||||||| | ||||||  || |||||||||||||||||||||||||  |  | |||| |||||||||    
T  10493568 tgaaatatgcaatttgagcaaacgagttgaacctaatgagtcgaatcgagttgctcgtgaactttaaacgagccgaacttgagttgaaaaaaaggttcgt 10493469  T
Q  134 tttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaactcagacaagtttgactcgactcggctcatttc 215  Q
    || |||||||||||||||||||||| |||||| || |||||||||||| |||||||| ||| || |||||||| ||||||||    
T  10493468 ttcgaactcgagtcgagtttcgagccgaaccatttcttatcgagtcgagctcagacaggttcgattcgactcgactcatttc 10493387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 29 - 214
Target Start/End: Complemental strand, 26299631 - 26299455
Alignment:
Q  29 gtttgtgaaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaagg 128  Q
    ||||||||||||||||||||||||||||||| |||||              |||||||||||||||||||||||||||||||||| |  | |||| ||||    
T  26299631 gtttgtgaaatatacaattcgagtaaacgagctgaac--------------cgaactgttcgtgaactttaaacgagccgaactcgagtttaaaaaaagg 26299546  T
Q  129 ttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaa-----ctcagacaagtttgactcgactcggctcattt 214  Q
    |||  || |||||||||||||||||||||| ||||||||| |||||||||||||     |||||||||||||||||||||||| |||||||    
T  26299545 ttcacttcgaactcgagtcgagtttcgagccgaaccaattcttatcgagtcgaatcgagctcagacaagtttgactcgactcgactcattt 26299455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 4983938 - 4984058
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||||| || |||  || |||||||||||||||||||||||||| | |  |||| |||||||||||||||||||||||||||||| |||||    
T  4983938 tgaacctaacgagccgaaccgagttgctcgtgaactttaaacgagccgaactcgagcccaaaaaaaggttcgttttgaactcgagtcgagtttcaagctg 4984037  T
Q  161 aaccaatttttatcgagtcga 181  Q
    |||||||| ||||||||||||    
T  4984038 aaccaattcttatcgagtcga 4984058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 26217563 - 26217431
Alignment:
Q  88 tcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaa----- 182  Q
    |||||||||||||||||||||||||  | |  |||| |||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||         
T  26217563 tcgtgaactttaaacgagccgaactggagcccaaaaaaaggttcgttttgaactcgagtcgagtttcgagccgaaccaattcttattgagtcgaaccgag 26217464  T
Q  183 ctcagacaagtttgactcgactcggctcatttc 215  Q
    |||||||||||| ||||||||||| ||||||||    
T  26217463 ctcagacaagttcgactcgactcgactcatttc 26217431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 27450982 - 27451122
Alignment:
Q  80 cgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtc 179  Q
    |||||||||||||||||||||||||||||||||| |  | |||| || ||||| || |||||||||| ||||||||||| ||||||||| ||||||||||    
T  27450982 cgaactgttcgtgaactttaaacgagccgaactcgagtttaaaaaaatgttcgcttcgaactcgagttgagtttcgagccgaaccaattcttatcgagtc 27451081  T
Q  180 gaa-----ctcagacaagtttgactcgactcggctcatttc 215  Q
    |||     |||||||| ||||||||||||||| ||||||||    
T  27451082 gaatcgagctcagacaggtttgactcgactcgactcatttc 27451122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 29 - 182
Target Start/End: Complemental strand, 39408904 - 39408765
Alignment:
Q  29 gtttgtgaaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaagg 128  Q
    ||||||||||||||||||||||||||||||| |||||              |||||||||||||||||||||||||||||||||| | || |||| || |    
T  39408904 gtttgtgaaatatacaattcgagtaaacgagctgaac--------------cgaactgttcgtgaactttaaacgagccgaactcgagcttaaaaaaaag 39408819  T
Q  129 ttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaa 182  Q
    |||| || |||||||||||||||||||||| ||||||||| |||||||||||||    
T  39408818 ttcgcttcgaactcgagtcgagtttcgagccgaaccaattcttatcgagtcgaa 39408765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 61 - 215
Target Start/End: Complemental strand, 41782861 - 41782707
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||||| || |||  || |||||||||||||||||||||||||| | |  |||| |||||||||||||||||||||||||||||||||| |    
T  41782861 tgaacctaacgagccgaaccgagttgctcgtgaactttaaacgagccgaactcgagcccaaaaaaaggttcgttttgaactcgagtcgagtttcgagccg 41782762  T
Q  161 aaccaatttttatcgagtcgaactcagacaagtttgactcgactcggctcatttc 215  Q
    |||||||| ||||| |  ||| |||| |||| || ||||||||||| || |||||    
T  41782761 aaccaattcttatcaaaccgagctcaaacaaattcgactcgactcgacttatttc 41782707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 34 - 205
Target Start/End: Complemental strand, 27195617 - 27195441
Alignment:
Q  34 tgaaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgt 133  Q
    |||||||||||||| |||||  | |||||||||||| ||  |||| ||| |||||||||||||||||||||||||||||| |  || | | |||||||||    
T  27195617 tgaaatatacaatttgagtaggcaagttgaacctaacgaatcaaaccgagctgttcgtgaactttaaacgagccgaactcgagttagagaaaaggttcgt 27195518  T
Q  134 tttgaactcgagtcgagtttcgagctgaaccaattttta-----tcgagtcgaactcagacaagtttgactcgactc 205  Q
    ||  ||||||||| ||||||||||| ||||||||| |||     ||||||||| |||||||| ||| ||||||||||    
T  27195517 ttcaaactcgagtagagtttcgagccgaaccaattcttattgagtcgagtcgagctcagacatgttcgactcgactc 27195441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 34724031 - 34724171
Alignment:
Q  80 cgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtc 179  Q
    ||||||||||||||||| ||||||||| |||||| | || |||| |||||||| || |||||||||||||||||||| ||||||||||| ||||||||||    
T  34724031 cgaactgttcgtgaactctaaacgagctgaactcgagcttaaaaaaaggttcgcttcgaactcgagtcgagtttcgaactgaaccaattcttatcgagtc 34724130  T
Q  180 gaa-----ctcagacaagtttgactcgactcggctcatttc 215  Q
    |||     ||| |||| ||| ||||||||||| ||||||||    
T  34724131 gaatcgagctcggacaggttcgactcgactcgactcatttc 34724171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 52 - 215
Target Start/End: Complemental strand, 43385975 - 43385806
Alignment:
Q  52 taaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatct-aaaaagaaggttcgttttgaactcgagtcgag 150  Q
    |||||||  ||||||||  ||||| ||  ||||| ||||||||||||||||||||||||||||| || ||||| || ||| || | ||||||||| ||||    
T  43385975 taaacgaactgaacctatcgagccgaactgaactattcgtgaactttaaacgagccgaactcaagctgaaaaaaaaagtttgtgtcgaactcgagccgag 43385876  T
Q  151 tttcgagctgaaccaatttttatcgagtcgaac-----tcagacaagtttgactcgactcggctcatttc 215  Q
    |||||||||||||||||| |||||||||||| |     |||||| |||| ||||||||||||| ||||||    
T  43385875 tttcgagctgaaccaattcttatcgagtcgagccgagctcagacgagttcgactcgactcggcacatttc 43385806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 85 - 181
Target Start/End: Original strand, 1840974 - 1841070
Alignment:
Q  85 tgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcga 181  Q
    ||||||||||||||||||||||||||||| |  |||||| | ||||||| | |||||||||||||||||||||| ||||||||| ||||||||||||    
T  1840974 tgttcgtgaactttaaacgagccgaactcgagttaaaaaaagggttcgtatcgaactcgagtcgagtttcgagccgaaccaattcttatcgagtcga 1841070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 34720055 - 34720195
Alignment:
Q  80 cgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtc 179  Q
    ||||||||||||||||||||||||||| |||||| | || |||| || ||||| || |||||||||||||||||||| | ||||||||| ||||||||||    
T  34720055 cgaactgttcgtgaactttaaacgagctgaactcgagcttaaaaaaaagttcgcttcgaactcgagtcgagtttcgaaccgaaccaattcttatcgagtc 34720154  T
Q  180 gaa-----ctcagacaagtttgactcgactcggctcatttc 215  Q
    |||     ||| |||| ||| ||||||||||| ||||||||    
T  34720155 gaatcgagctcggacaggttcgactcgactcgactcatttc 34720195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 215
Target Start/End: Original strand, 5385062 - 5385221
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    |||| |||||||||| || |||| ||||||||||||||||||||| ||||||| | ||||||| |  |||||| ||||||||||||| |||||||||| |    
T  5385062 tgaatctaatgagccgaaccgaattgttcgtgaactttaaacgagtcgaactcgagctaaaaaaagagttcgtgttgaactcgagtcaagtttcgagccg 5385161  T
Q  161 aaccaatttttatcgagtcgaa-----ctcagacaagtttgactcgactcggctcatttc 215  Q
    ||| |||||| ||||| |||||     |||||| ||||| || |||||||| ||||||||    
T  5385162 aacaaattttaatcgaatcgaatcgagctcagaaaagttcgattcgactcgactcatttc 5385221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 215
Target Start/End: Original strand, 11136636 - 11136795
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||||| || |||  || ||||||||||||||||| |||| ||| | |  |||| |||||||||||||||||||||||||||||||||| |    
T  11136636 tgaacctaacgagccgaaccgagttgctcgtgaactttaaacgaaccgagctcgagcccaaaaaaaggttcgttttgaactcgagtcgagtttcgagccg 11136735  T
Q  161 aaccaatttttatcgagtcgaac-----tcagacaagtttgactcgactcggctcatttc 215  Q
    |||| ||| ||||||| |||| |     ||||||||||| ||||||||||| ||||||||    
T  11136736 aacctattcttatcgaatcgagccgagttcagacaagttcgactcgactcgactcatttc 11136795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 80 - 182
Target Start/End: Complemental strand, 19715920 - 19715819
Alignment:
Q  80 cgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtc 179  Q
    |||||| ||||||||||||||||||||||||||| |  | |||| |||||||| || |||||||||||||||||||||| ||||||||| ||||||||||    
T  19715920 cgaactattcgtgaactttaaacgagccgaactcgagtttaaaa-aaggttcgcttcgaactcgagtcgagtttcgagccgaaccaattattatcgagtc 19715822  T
Q  180 gaa 182  Q
    |||    
T  19715821 gaa 19715819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 29 - 182
Target Start/End: Complemental strand, 26298090 - 26297951
Alignment:
Q  29 gtttgtgaaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaagg 128  Q
    ||||||||||||||||||||||||||||||| |||||              |||||| ||||||||||||||||||||||||||| |  | |||| ||||    
T  26298090 gtttgtgaaatatacaattcgagtaaacgagctgaac--------------cgaactattcgtgaactttaaacgagccgaactcgagtttaaaaaaagg 26298005  T
Q  129 ttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaa 182  Q
    |||| || |||||||| ||||||||||||| ||||||||| |||||||||||||    
T  26298004 ttcgcttcgaactcgaatcgagtttcgagccgaaccaattcttatcgagtcgaa 26297951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 29 - 182
Target Start/End: Complemental strand, 39407166 - 39407027
Alignment:
Q  29 gtttgtgaaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaagg 128  Q
    ||||||||||||||||||||||||||||||| |||||              |||||||||||||||||||||||||||||||||| | || |||| || |    
T  39407166 gtttgtgaaatatacaattcgagtaaacgagctgaac--------------cgaactgttcgtgaactttaaacgagccgaactcgagcttaaaaaaaag 39407081  T
Q  129 ttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaa 182  Q
    |||  || |||||||||||||||||||| | ||||||||| |||||||||||||    
T  39407080 ttcacttcgaactcgagtcgagtttcgaaccgaaccaattcttatcgagtcgaa 39407027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 18879787 - 18879667
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||||| || |||||||||||||||||||||| ||||||||||| | || |||| |  |||||| | ||||||||| | |||||||||| |    
T  18879787 tgaacctaacgagccgaaccgaactgttcgtgaactttaaatgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagccaagtttcgagccg 18879688  T
Q  161 aaccaatttttatcgagtcga 181  Q
    |||||||| ||||||||||||    
T  18879687 aaccaattcttatcgagtcga 18879667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 57 - 188
Target Start/End: Complemental strand, 28430721 - 28430589
Alignment:
Q  57 gagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaa-agaaggttcgttttgaactcgagtcgagtttcg 155  Q
    |||||||| ||||  ||||||| |||  ||||||| ||||||||||||||||||||| |  ||||| | ||||||||| | ||||||||||||||||| |    
T  28430721 gagttgaatctaacaagccaaaccgagttgttcgttaactttaaacgagccgaactcgaattaaaagaaaaggttcgtatcgaactcgagtcgagttttg 28430622  T
Q  156 agctgaaccaatttttatcgagtcgaactcaga 188  Q
    |||||||| |||| |||||||||||| ||||||    
T  28430621 agctgaactaattcttatcgagtcgagctcaga 28430589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 63 - 215
Target Start/End: Complemental strand, 28242550 - 28242398
Alignment:
Q  63 aacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaa 162  Q
    ||||||| ||| | ||||||  ||||||||||||||||| |||||||||||||  |||| | |||||| ||||  ||||||| |||||||||||||  ||    
T  28242550 aacctaacgagtcgaatcgagttgttcgtgaactttaaatgagccgaactcaagttaaagaaaaggtttgtttcaaactcgattcgagtttcgagccaaa 28242451  T
Q  163 ccaatttttatcgagtcgaactcagacaagtttgactcgactcggctcatttc 215  Q
    |||||| ||||| | || | |||||||| |||||| |||| ||| ||||||||    
T  28242450 ccaattcttatctaatcaagctcagacatgtttgattcgattcgactcatttc 28242398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 32157358 - 32157478
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    |||| |||| ||||| || ||||||| |||||||||||||||||||||||||| | || |||| |  |||||| | ||||||||| | |||||||||| |    
T  32157358 tgaatctaacgagccgaaccgaactggtcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagccaagtttcgagccg 32157457  T
Q  161 aaccaatttttatcgagtcga 181  Q
    |||||||| ||||||||||||    
T  32157458 aaccaattcttatcgagtcga 32157478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 34857127 - 34856946
Alignment:
Q  29 gtttgtgaaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaagg 128  Q
    ||||||||||||||||||||||||||||||| |||||              ||||||||||||||||    |||||||||||||| | || |||| || |    
T  34857127 gtttgtgaaatatacaattcgagtaaacgagctgaac--------------cgaactgttcgtgaac----aacgagccgaactcgaacttaaaaaaatg 34857046  T
Q  129 ttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgag-----tcgaactcagacaagtttgactcgactcggctcatttcaagtccta 223  Q
    |||| || ||||||||||| |||||||||| ||||||||| ||||||||     |||||||||||||  || ||||||||||| |||||||| |||||||    
T  34857045 ttcgcttcgaactcgagtcaagtttcgagccgaaccaattcttatcgagtcgaatcgaactcagacagattcgactcgactcgactcatttccagtccta 34856946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 15932104 - 15931984
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaa-tctaaaaagaaggttcgttttgaactcgagtcgagtttcgagct 159  Q
    ||||||||  ||||| || ||||||||||||||||||||||||| |||||||| | || |||||  || ||||| ||||||||||  |||||||| ||||    
T  15932104 tgaacctatcgagccgaaccgaactgttcgtgaactttaaacgaaccgaactcgagtcgaaaaaagag-ttcgtgttgaactcgaaccgagtttcaagct 15932006  T
Q  160 gaaccaatttttatcgagtcga 181  Q
    ||||||||| ||||||||||||    
T  15932005 gaaccaattcttatcgagtcga 15931984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 57 - 181
Target Start/End: Original strand, 19283554 - 19283677
Alignment:
Q  57 gagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcga 156  Q
    |||||||| |||||||| | || |||  |||||||||||||||||  ||  |||||| |  |||||| ||||||||| | ||||||||||||||||||||    
T  19283554 gagttgaatctaatgagtcgaaccgagttgttcgtgaactttaaatcagtagaactcgagttaaaaa-aaggttcgtatcgaactcgagtcgagtttcga 19283652  T
Q  157 gctgaaccaatttttatcgagtcga 181  Q
    ||| |||||||| ||||||||||||    
T  19283653 gctaaaccaattcttatcgagtcga 19283677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 27905647 - 27905527
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||||| || ||||||||||||||||||||||||||||||| ||   || |||| |  |||||| | ||||||||| ||||||||| || |    
T  27905647 tgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaattcgggctgaaaaaatagttcgtgtcgaactcgagccgagtttcgtgccg 27905548  T
Q  161 aaccaatttttatcgagtcga 181  Q
    |||||||| ||||| ||||||    
T  27905547 aaccaattcttatcaagtcga 27905527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 57 - 181
Target Start/End: Original strand, 40057779 - 40057904
Alignment:
Q  57 gagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttc-gttttgaactcgagtcgagtttcg 155  Q
    |||||||||||||||||   || |||   |||||||||||| |||| |||||||||| |  |||||| ||||||  || | |||||||| | |||||||     
T  40057779 gagttgaacctaatgagttgaaccgagtggttcgtgaacttgaaacaagccgaactcgagttaaaaaaaaggttttgtatcgaactcgaattgagtttca 40057878  T
Q  156 agctgaaccaatttttatcgagtcga 181  Q
    ||||||||||||||||||||||||||    
T  40057879 agctgaaccaatttttatcgagtcga 40057904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 22921598 - 22921546
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactc 113  Q
    ||||||||| ||||| || ||||||||||||||||||||||||||||||||||    
T  22921598 tgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactc 22921546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 20191199 - 20191258
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaact 112  Q
    |||||| |||||||||||||||| || | ||||||| |||||||||||||||||||||||    
T  20191199 aaacgaattgaacctaatgagccgaaccaaactgtttgtgaactttaaacgagccgaact 20191258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 1224731 - 1224635
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgag 157  Q
    ||||||||| ||||| || |||||||||||||||| ||||||||| ||||||| | |  || | |  |||||| | |||||||||||||||||||||    
T  1224731 tgaacctaacgagccgaaccgaactgttcgtgaaccttaaacgagtcgaactcgagcggaataaagagttcgtgtcgaactcgagtcgagtttcgag 1224635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 29322218 - 29322166
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactc 113  Q
    ||||||||| ||||| || ||||| ||||||||||||||||||||||||||||    
T  29322218 tgaacctaacgagccgaaccgaacagttcgtgaactttaaacgagccgaactc 29322166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 38523230 - 38523282
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactc 113  Q
    ||||||||| ||||| || | ||||||||||||||||||||||||||||||||    
T  38523230 tgaacctaacgagccgaaccaaactgttcgtgaactttaaacgagccgaactc 38523282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 215
Target Start/End: Complemental strand, 2675475 - 2675310
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtt 152  Q
    |||||| |||||||||||||||| |  | |||||||||||||||||||||||| ||||||| | || |||| || |||||| |  | |||||  |||  |    
T  2675475 aaacgaattgaacctaatgagccgac-caaactgttcgtgaactttaaacgagtcgaactcgagctgaaaa-aaagttcgtatcaagctcgaaccgaagt 2675378  T
Q  153 tcgagctgaaccaattttt-----atcgagtcgaactcagacaagtttgactcgactcggctcatttc 215  Q
    |||| | || |||||| ||     ||||||||||||| ||||||||| || |||||||||||||||||    
T  2675377 tcgaaccgagccaattcttaacgaatcgagtcgaacttagacaagttcgattcgactcggctcatttc 2675310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 3805413 - 3805466
Alignment:
Q  128 gttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcga 181  Q
    |||||| | ||||||||| |||||||||||| ||||||||| ||||||||||||    
T  3805413 gttcgtgtcgaactcgagccgagtttcgagccgaaccaattcttatcgagtcga 3805466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 27450945 - 27450982
Alignment:
Q  29 gtttgtgaaatatacaattcgagtaaacgagttgaacc 66  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  27450945 gtttgtgaaatatacaattcgagtaaacgagctgaacc 27450982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 34720018 - 34720055
Alignment:
Q  29 gtttgtgaaatatacaattcgagtaaacgagttgaacc 66  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  34720018 gtttgtgaaatatacaattcgagtaaacgagctgaacc 34720055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 34723994 - 34724031
Alignment:
Q  29 gtttgtgaaatatacaattcgagtaaacgagttgaacc 66  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  34723994 gtttgtgaaatatacaattcgagtaaacgagctgaacc 34724031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 88 - 205
Target Start/End: Complemental strand, 39413484 - 39413367
Alignment:
Q  88 tcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaactcag 187  Q
    |||| ||||||||| ||| ||||||| |  |||| | || ||| || | ||| |||||||||||||  |||  ||| ||||||||||||||||| ||||     
T  39413484 tcgtcaactttaaatgagtcgaactcgagttaaataaaaagtttgtatcgaattcgagtcgagttttaagcgtaactaatttttatcgagtcgagctcat 39413385  T
Q  188 acaagtttgactcgactc 205  Q
    || |||||||||||||||    
T  39413384 acgagtttgactcgactc 39413367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 112
Target Start/End: Complemental strand, 20188525 - 20188466
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaact 112  Q
    |||||| | |||| ||||||||| || | ||||||||||||||||||||||||| |||||    
T  20188525 aaacgaatcgaacttaatgagccgaaccaaactgttcgtgaactttaaacgagcggaact 20188466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 59
Target Start/End: Complemental strand, 19715957 - 19715927
Alignment:
Q  29 gtttgtgaaatatacaattcgagtaaacgag 59  Q
    |||||||||||||||||||||||||||||||    
T  19715957 gtttgtgaaatatacaattcgagtaaacgag 19715927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 2770996 - 2771033
Alignment:
Q  165 aatttttatcgagtcgaactcagacaagtttgactcga 202  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  2770996 aatttttatcgagttgaactcagacaattttgactcga 2771033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 14501398 - 14501439
Alignment:
Q  140 ctcgagtcgagtttcgagctgaaccaatttttatcgagtcga 181  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||    
T  14501398 ctcgagtcgagtttcgagccgaaccgattcttatcgagtcga 14501439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 34725103 - 34725140
Alignment:
Q  29 gtttgtgaaatatacaattcgagtaaacgagttgaacc 66  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  34725103 gtttgtgaaatatacaattcaagtaaacgagctgaacc 34725140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 4e-41; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 31 - 176
Target Start/End: Original strand, 24009378 - 24009518
Alignment:
Q  31 ttgtgaaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggtt 130  Q
    ||||||||||| ||||| |||||||||||||||||||||||| ||     |||||||||||||||||||||||||| |||||| | ||||||| ||||||    
T  24009378 ttgtgaaatatgcaatttgagtaaacgagttgaacctaatgaacc-----gaactgttcgtgaactttaaacgagcagaactcgagctaaaaaaaaggtt 24009472  T
Q  131 cgttttgaactcgagtcgagtttcgagctgaaccaatttttatcga 176  Q
    |||||||||||||||||| |||||||| |||||||||| |||||||    
T  24009473 cgttttgaactcgagtcgggtttcgagttgaaccaattcttatcga 24009518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 56 - 205
Target Start/End: Complemental strand, 44377777 - 44377628
Alignment:
Q  56 cgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcg 155  Q
    |||||||||||||| ||||| || | |  |||||||||||||||||||||||||||||||  || | | |||||||||||  ||||||||||||||||||    
T  44377777 cgagttgaacctaacgagccgaaccaagttgttcgtgaactttaaacgagccgaactcaagttagagaaaaggttcgtttcaaactcgagtcgagtttcg 44377678  T
Q  156 agctgaaccaatttttatcgagtcgaactcagacaagtttgactcgactc 205  Q
    ||| ||||||||| |||||||||||| |||||||| ||| ||||||||||    
T  44377677 agccgaaccaattcttatcgagtcgagctcagacaggttcgactcgactc 44377628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 9469594 - 9469474
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||||| |||||||||||||||||||||||||||| |||||||| | || |||| |  |||||| | ||||||||| |||||||||||| |    
T  9469594 tgaacctaacgagccgaatcgaactgttcgtgaactttaaacgatccgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgagtttcgagccg 9469495  T
Q  161 aaccaatttttatcgagtcga 181  Q
    |||||||| ||||||||||||    
T  9469494 aaccaattcttatcgagtcga 9469474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 19850299 - 19850179
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||||| || |||||||||||||||||||||||||||||||||| | || |||| |  |||||| | ||||||||| |||||||||||| |    
T  19850299 tgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgagtttcgagccg 19850200  T
Q  161 aaccaatttttatcgagtcga 181  Q
    ||||||| |||||||||||||    
T  19850199 aaccaatgtttatcgagtcga 19850179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 49820545 - 49820425
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||||| ||  ||||||||||||||||||||||||||||||||| | || |||| |  |||||| | |||||||||||||||||||||| |    
T  49820545 tgaacctaacgagccgaactgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagtcgagtttcgagccg 49820446  T
Q  161 aaccaatttttatcgagtcga 181  Q
    |||||||| ||||||||||||    
T  49820445 aaccaattcttatcgagtcga 49820425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 61 - 214
Target Start/End: Original strand, 28266717 - 28266870
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||| | || |||||||||||||||||||||||||| ||||||| | ||||||| |  |||||| | |||||||||||||||||||||| |    
T  28266717 tgaacctaacgagtcgaaccgaactgttcgtgaactttaaacgagtcgaactcgagctaaaaaaagagttcgtgtcgaactcgagtcgagtttcgagccg 28266816  T
Q  161 aaccaatttttatcgagtcgaactcagacaagtttgactcgactcggctcattt 214  Q
    | | |||| ||||| |||||| |||||||| |||  | |||||||| |||||||    
T  28266817 agcaaattcttatccagtcgagctcagacatgttcaattcgactcgactcattt 28266870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 61 - 225
Target Start/End: Complemental strand, 52705760 - 52705591
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||||| || |||  || |||| ||||||||||||||||||||| | |  |||| ||||||| |||| ||||||| ||||||||||||| |    
T  52705760 tgaacctaacgagccgaaccgagttgctcgtaaactttaaacgagccgaactcgagcccaaaaaaaggttcattttaaactcgaatcgagtttcgagccg 52705661  T
Q  161 aaccaatttttatcgagtcgaac-----tcagacaagtttgactcgactcggctcatttcaagtcctaac 225  Q
    |||||||| |||||||||||| |     ||||||||||| ||||||||||| |||||||| || ||||||    
T  52705660 aaccaattcttatcgagtcgagccgagctcagacaagttcgactcgactcgactcatttccagccctaac 52705591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 50605622 - 50605502
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||||| || ||||||||||||||||||||||| |||||||||| | || |||| |  |||||| | ||||||||| |||||||||||| |    
T  50605622 tgaacctaacgagccgaaccgaactgttcgtgaactttaaacaagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgagtttcgagccg 50605523  T
Q  161 aaccaatttttatcgagtcga 181  Q
    |||||||| ||||||||||||    
T  50605522 aaccaattcttatcgagtcga 50605502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 90 - 204
Target Start/End: Original strand, 50711443 - 50711557
Alignment:
Q  90 gtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaactcagac 189  Q
    |||||||||||||||||||||||| | ||| ||| ||| ||||||||||||||||  ||||||| |||| ||||||||| |||||||||||| |||||||    
T  50711443 gtgaactttaaacgagccgaactcgagctagaaaaaagattcgttttgaactcgaaccgagttttgagccgaaccaattcttatcgagtcgagctcagac 50711542  T
Q  190 aagtttgactcgact 204  Q
    |  || |||||||||    
T  50711543 agattcgactcgact 50711557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 178
Target Start/End: Complemental strand, 53369229 - 53369112
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||||| || ||||| |||||||||||||||||||||||||||| | || |||| |  |||||| | ||||||||| |||||||||||| |    
T  53369229 tgaacctaacgagccgaaccgaacagttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgagtttcgagccg 53369130  T
Q  161 aaccaatttttatcgagt 178  Q
    |||||||| |||||||||    
T  53369129 aaccaattcttatcgagt 53369112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 4275515 - 4275635
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    |||||| || |||||||| |||||| ||||||||||||||||||| ||||| ||| || |||| |  ||| || | ||||||||| ||||||||||||||    
T  4275515 tgaacccaacgagccaaaccgaactattcgtgaactttaaacgagtcgaacccaagctgaaaaaatagtttgtgtcgaactcgagccgagtttcgagctg 4275614  T
Q  161 aaccaatttttatcgagtcga 181  Q
    |||||||| ||||||||||||    
T  4275615 aaccaattcttatcgagtcga 4275635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 21436474 - 21436354
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||| | || |||| |  || ||| | ||| ||||| |||||||||||| |    
T  21436474 tgaacctaacgagccaaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagtccgtgtcgaattcgagccgagtttcgagccg 21436375  T
Q  161 aaccaatttttatcgagtcga 181  Q
    || ||||| ||||||||||||    
T  21436374 aatcaattcttatcgagtcga 21436354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 39 - 178
Target Start/End: Original strand, 46945126 - 46945265
Alignment:
Q  39 tatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttga 138  Q
    ||||||||||||||| ||||||| ||||||| ||||| || |||  |||||   || ||||||||||||||| || |  |||||| |||||| ||||  |    
T  46945126 tatacaattcgagtagacgagttaaacctaacgagccgaaccgagttgttcacaaattttaaacgagccgaattcgagttaaaaaaaaggtttgtttcaa 46945225  T
Q  139 actcgagtcgagtttcgagctgaaccaatttttatcgagt 178  Q
    |||||||||||||||||||| ||||||||| |||||||||    
T  46945226 actcgagtcgagtttcgagccgaaccaattcttatcgagt 46945265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 214
Target Start/End: Original strand, 12673613 - 12673799
Alignment:
Q  34 tgaaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaa-agaaggttcg 132  Q
    |||| ||||||||||||||| ||||||||||||||| ||| | || |||  |||||| ||||||||||||||||||| |  |  ||||| | ||||||||    
T  12673613 tgaagtatacaattcgagtagacgagttgaacctaacgagtcgaaccgagttgttcgcgaactttaaacgagccgaaattgagttaaaataaaaggttcg 12673712  T
Q  133 ttttgaactcgagtcgagtttcgagctgaaccaattttta-----tcgagtcgaactcagacaagtttgactcgactcggctcattt 214  Q
    |||  ||||||||||||||||||||| |||| | || |||     | ||||||| |||||||| ||| ||||||||||| |||||||    
T  12673713 tttcaaactcgagtcgagtttcgagccgaactatttcttaaagagttgagtcgagctcagacaggttcgactcgactcgactcattt 12673799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 84 - 181
Target Start/End: Original strand, 50240890 - 50240987
Alignment:
Q  84 ctgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcga 181  Q
    |||||||| || ||||| |||||||||| | | ||||||| |||||| |||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  50240890 ctgttcgttaattttaagcgagccgaacacgagctaaaaaaaaggtttgtttcgaactcgagtagagtttcgagctgaaccaatttttaacgagtcga 50240987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 204
Target Start/End: Original strand, 51409087 - 51409235
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||||| |  |||||||| ||||||||||||||||| ||||||| | ||||||| |  |||||| | |||||||| ||||||||||||| |    
T  51409087 tgaacctaacgagccgagccgaactgtacgtgaactttaaacgagtcgaactcgagctaaaaaaatagttcgtgtcgaactcgaatcgagtttcgagccg 51409186  T
Q  161 aaccaatttttatcgagtcgaa-----ctcagacaagtttgactcgact 204  Q
    ||| |||| ||||||||||||      |||||||||||| |||||||||    
T  51409187 aacaaattcttatcgagtcgagtcgagctcagacaagttcgactcgact 51409235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 29 - 182
Target Start/End: Complemental strand, 1803352 - 1803213
Alignment:
Q  29 gtttgtgaaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaagg 128  Q
    ||||||||||||||||||||||||||||||| |||||              |||||| || ||||||||||||||| |||||||| | || |||| ||||    
T  1803352 gtttgtgaaatatacaattcgagtaaacgagctgaac--------------cgaactcttagtgaactttaaacgaaccgaactcgagcttaaaaaaagg 1803267  T
Q  129 ttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaa 182  Q
    |||| || ||||||||||| |||||||| | ||||||||||||||||| |||||    
T  1803266 ttcgcttcgaactcgagtcaagtttcgaaccgaaccaatttttatcgaatcgaa 1803213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 85 - 199
Target Start/End: Original strand, 16743116 - 16743230
Alignment:
Q  85 tgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaact 184  Q
    |||||||||||||||| | || |||||||||  |||||| | |||||||    |||| |||||||||||||||| ||||||||| |||||||||||| ||    
T  16743116 tgttcgtgaactttaatcaagtcgaactcaagttaaaaaaatggttcgtaacaaacttgagtcgagtttcgagccgaaccaattcttatcgagtcgagct 16743215  T
Q  185 cagacaagtttgact 199  Q
    |||||||||| ||||    
T  16743216 cagacaagttcgact 16743230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 48977171 - 48977051
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||||| || | || |||||||||| |||||||||||||||||| | || |||| |  |||||| | ||||||||| |||||||||||| |    
T  48977171 tgaacctaacgagccgaaccaaattgttcgtgaattttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgagtttcgagccg 48977072  T
Q  161 aaccaatttttatcgagtcga 181  Q
    |||||||| ||||||| ||||    
T  48977071 aaccaattcttatcgaatcga 48977051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 60 - 181
Target Start/End: Complemental strand, 43386702 - 43386581
Alignment:
Q  60 ttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagct 159  Q
    |||||||||| ||| | || |||||||||||||||||||||||||| |||| || | || |||| |  |||||| | |||||||||||||||||| |||     
T  43386702 ttgaacctaacgagtcgaaccgaactgttcgtgaactttaaacgagtcgaattcgagctgaaaaaagagttcgtgtcgaactcgagtcgagtttcaagcc 43386603  T
Q  160 gaaccaatttttatcgagtcga 181  Q
    || | |||| ||||||||||||    
T  43386602 gagcaaattcttatcgagtcga 43386581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 36543461 - 36543365
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgag 157  Q
    ||||||||| ||||| || |||||||||||||||||||||||||||||||||| | || |||| |  ||| || | ||||||||| |||||||||||    
T  36543461 tgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagtttgtgtcgaactcgagccgagtttcgag 36543365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 215
Target Start/End: Original strand, 54625743 - 54625902
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtt 152  Q
    ||||||||||||| ||||||| | ||||||| |||||| || |||||||||||| |||||| |  |||||| |   ||| | | |||| ||||| |||||    
T  54625743 aaacgagttgaacttaatgagtcgaatcgaattgttcgcgagctttaaacgagctgaactcgagttaaaaaaa---ttcatatcgaacccgagttgagtt 54625839  T
Q  153 tcgagctgaaccaatttttatcgagtcgaactcagacaagtttgactcgactcggctcatttc 215  Q
    | ||| |||||||||| |||| ||||||| |||  |||| || ||||||||||| ||||||||    
T  54625840 ttgagttgaaccaattcttattgagtcgagctcgaacaaattcgactcgactcgactcatttc 54625902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 40797296 - 40797201
Alignment:
Q  86 gttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcga 181  Q
    ||||||||||||||||||| |||||||| |  || |||  ||||||||| |||||||||| |  ||||||||| ||||||||| ||||||||||||    
T  40797296 gttcgtgaactttaaacgacccgaactcgagttagaaaagaggttcgttgtgaactcgagccatgtttcgagccgaaccaattcttatcgagtcga 40797201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 54 - 181
Target Start/End: Complemental strand, 52813173 - 52813046
Alignment:
Q  54 aacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagttt 153  Q
    ||||| ||||||| || ||| | || |||||||||||||||||||||||||| |||| || | || |||| |  |||||| | |||||||||||||||||    
T  52813173 aacgaattgaaccgaacgagtcgaaccgaactgttcgtgaactttaaacgaggcgaattcgagctgaaaaaagagttcgtgtcgaactcgagtcgagttt 52813074  T
Q  154 cgagctgaaccaatttttatcgagtcga 181  Q
    | ||| || | |||| ||||||||||||    
T  52813073 caagccgagcaaattcttatcgagtcga 52813046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 214
Target Start/End: Original strand, 48340211 - 48340373
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatct-aaaaagaaggttcgttttgaactcgagtcgagt 151  Q
    |||||| ||||| |||||||| | || | ||||||| |||||||||||||||| |||||| || || ||||| || |||||| |  ||||||| ||||      
T  48340211 aaacgaattgaatctaatgagtcgaaccaaactgtttgtgaactttaaacgagtcgaacttaagctcaaaaaaaaagttcgtgtcaaactcgaatcgaag 48340310  T
Q  152 ttcgagctgaaccaatttttatcgagtcgaactcagacaagtttgactcgactcggctcattt 214  Q
    ||||| |  | |||||| |||  |||||||||||||||| |||||| |||||||| |||||||    
T  48340311 ttcgaaccaagccaattcttaatgagtcgaactcagacatgtttgattcgactcgactcattt 48340373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 44792766 - 44792818
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactc 113  Q
    ||||||||| ||||| || ||||||||||||||||||||||||||||||||||    
T  44792766 tgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactc 44792818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 145
Target Start/End: Original strand, 9222733 - 9222844
Alignment:
Q  34 tgaaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgt 133  Q
    |||||||| ||||| ||| ||| ||| ||||||||||||| | || |||   |||| |||||||||||| |||||||||| | ||||||| |||||||||    
T  9222733 tgaaatatgcaatttgagcaaatgaggtgaacctaatgagtcgaaccgagtggttcatgaactttaaacaagccgaactcgagctaaaaaaaaggttcgt 9222832  T
Q  134 tttgaactcgag 145  Q
    ||  ||||||||    
T  9222833 ttgaaactcgag 9222844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 181
Target Start/End: Complemental strand, 22183937 - 22183810
Alignment:
Q  54 aacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagttt 153  Q
    ||||| |||||||||| ||||  || |||||||||||||||||||||||||| | || || | || |||| |  |||||| | |||||||||||||||||    
T  22183937 aacgaattgaacctaacgagcggaaccgaactgttcgtgaactttaaacgagtcaaattcgagctgaaaaaagagttcgtgtcgaactcgagtcgagttt 22183838  T
Q  154 cgagctgaaccaatttttatcgagtcga 181  Q
     |||| || | |||| ||||| ||||||    
T  22183837 tgagccgagcaaattcttatcaagtcga 22183810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 36156875 - 36156934
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaact 112  Q
    |||||| |||||||||||||||| || | |||||||||||||||||||||||| ||||||    
T  36156875 aaacgaattgaacctaatgagccgaaccaaactgttcgtgaactttaaacgagtcgaact 36156934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 112
Target Start/End: Original strand, 43812649 - 43812700
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaact 112  Q
    ||||||||||||||| || | |||||||||||||||||||||||||||||||    
T  43812649 tgaacctaatgagccgaaccaaactgttcgtgaactttaaacgagccgaact 43812700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 188
Target Start/End: Original strand, 48151735 - 48151837
Alignment:
Q  86 gttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaactc 185  Q
    |||||||||||||||||||| ||||||| |  ||  || ||||||||| ||||| ||||||| | ||| |||| || |||||| |||||||||||| |||    
T  48151735 gttcgtgaactttaaacgagtcgaactcgagttaggaaaaaggttcgtattgaattcgagtcaaattttgagccgagccaattcttatcgagtcgagctc 48151834  T
Q  186 aga 188  Q
    |||    
T  48151835 aga 48151837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 215
Target Start/End: Complemental strand, 7505513 - 7505432
Alignment:
Q  139 actcgagtcgagtttcgagctgaaccaatttttatcgagtcgaac-----tcagacaagtttgactcgactcggctcatttc 215  Q
    |||||||||||||||||||| ||| ||||| |||||||||||| |     ||||||||||| ||||||||||| ||||||||    
T  7505513 actcgagtcgagtttcgagccgaatcaattcttatcgagtcgagccgagctcagacaagttcgactcgactcgactcatttc 7505432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 111
Target Start/End: Complemental strand, 38791184 - 38791127
Alignment:
Q  54 aacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaac 111  Q
    ||||||||||||||||||||| |||| ||  |||||||||||||||||||||| ||||    
T  38791184 aacgagttgaacctaatgagcgaaattgagttgttcgtgaactttaaacgagctgaac 38791127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 51994183 - 51994130
Alignment:
Q  128 gttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcga 181  Q
    ||||| || |||||||||||||||||||||||||||||||| ||| ||||||||    
T  51994183 gttcggttcgaactcgagtcgagtttcgagctgaaccaattcttaacgagtcga 51994130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 9874603 - 9874667
Alignment:
Q  138 aactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaactcagacaagtttgactcga 202  Q
    ||||||||||||||||||| | ||   ||||||||||||||||| |||||| |||||||||||||    
T  9874603 aactcgagtcgagtttcgaaccgatttaatttttatcgagtcgagctcagataagtttgactcga 9874667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 45674459 - 45674407
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactc 113  Q
    ||||||||| ||||| || |||||| |||||||||||||||||||||||||||    
T  45674459 tgaacctaacgagccgaaccgaactattcgtgaactttaaacgagccgaactc 45674407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 38791136 - 38791085
Alignment:
Q  154 cgagctgaaccaatttttatcgagtcgaactcagacaagtttgactcgactc 205  Q
    |||||||||||||||||||||||||||| |||| ||| ||| ||||||||||    
T  38791136 cgagctgaaccaatttttatcgagtcgagctcaaacatgttcgactcgactc 38791085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 49084686 - 49084749
Alignment:
Q  151 tttcgagctgaaccaatttttatcgagtcgaactcagacaagtttgactcgactcggctcattt 214  Q
    |||||| ||||| ||| |||||||||||||| ||||||||||||  ||||||||| ||||||||    
T  49084686 tttcgaactgaatcaaattttatcgagtcgagctcagacaagttcaactcgactctgctcattt 49084749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 80 - 113
Target Start/End: Original strand, 12790150 - 12790183
Alignment:
Q  80 cgaactgttcgtgaactttaaacgagccgaactc 113  Q
    ||||||||||||||||||||||||||||||||||    
T  12790150 cgaactgttcgtgaactttaaacgagccgaactc 12790183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 25134061 - 25133980
Alignment:
Q  100 aacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcga 181  Q
    |||||||||||||  | ||| ||| || |||||||| ||||||||  || ||||||||| ||||||||| ||||||||||||    
T  25134061 aacgagccgaacttgagctagaaaaaatgttcgtttcgaactcgaaccgggtttcgagccgaaccaattcttatcgagtcga 25133980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 50147320 - 50147373
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactca 114  Q
    ||||||||||||||| || | ||||||| ||||||||||||||| |||||||||    
T  50147320 tgaacctaatgagccgaaccaaactgtttgtgaactttaaacgaaccgaactca 50147373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 54742260 - 54742200
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactc 113  Q
    |||||| |||||||| ||||| | || | ||||||||||||||||||||||| ||||||||    
T  54742260 aaacgaattgaacctgatgagtcgaaccaaactgttcgtgaactttaaacgaaccgaactc 54742200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 112
Target Start/End: Original strand, 32398350 - 32398401
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaact 112  Q
    |||||||||||| || || | ||||||||||||||| |||||||||||||||    
T  32398350 tgaacctaatgaaccgaaccaaactgttcgtgaactctaaacgagccgaact 32398401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 205
Target Start/End: Complemental strand, 27890710 - 27890640
Alignment:
Q  135 ttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaactcagacaagtttgactcgactc 205  Q
    ||||| |||| |||||||| |||||||  | ||| |||| ||||||||||||||||| || ||||||||||    
T  27890710 ttgaattcgaatcgagttttgagctgagtcgattcttattgagtcgaactcagacaaattcgactcgactc 27890640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 55892670 - 55892740
Alignment:
Q  80 cgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgag 150  Q
    |||||||| |||| |||||||||||| ||||||| | ||||||| |  |||||| | ||||||||||||||    
T  55892670 cgaactgtacgtgtactttaaacgagtcgaactcgagctaaaaaaatagttcgtgtcgaactcgagtcgag 55892740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 27890779 - 27890726
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagc 106  Q
    ||||||||||||||||||||||| ||||||  |  |||||||| ||||||||||    
T  27890779 aaacgagttgaacctaatgagccgaatcgagttactcgtgaacattaaacgagc 27890726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 18990360 - 18990308
Alignment:
Q  60 ttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaact 112  Q
    |||||| ||||||| |||| | | || ||||||||||||||||||||||||||    
T  18990360 ttgaacttaatgagtcaaaccaatctattcgtgaactttaaacgagccgaact 18990308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 3e-39; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 34 - 215
Target Start/End: Complemental strand, 24575494 - 24575308
Alignment:
Q  34 tgaaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgt 133  Q
    |||| ||||||||||||||| ||||||||||||||| ||||| || |||  ||||||||||||||||||||||||||||| |  |||||| || ||||||    
T  24575494 tgaagtatacaattcgagtagacgagttgaacctaacgagccgaaccgagttgttcgtgaactttaaacgagccgaactcgagttaaaaaaaaagttcgt 24575395  T
Q  134 tttgaactcgagtcgagtttcgagctgaaccaatttttatcg-----agtcgaactcagacaagtttgactcgactcggctcatttc 215  Q
    ||  ||||||||||||||||||||| ||||||||| ||||||     | |||| |||||||| ||| ||||||||||| ||||||||    
T  24575394 ttcaaactcgagtcgagtttcgagccgaaccaattcttatcgattcaaatcgagctcagacaggttcgactcgactcgactcatttc 24575308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 61 - 215
Target Start/End: Original strand, 43090005 - 43090159
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||||| || |||  || |||||||||||||||||||||||||| | |  |||| || ||||||||||||||||||||||||||||||| |    
T  43090005 tgaacctaacgagccgaaccgagttgctcgtgaactttaaacgagccgaactcgagcccaaaaaaatgttcgttttgaactcgagtcgagtttcgagccg 43090104  T
Q  161 aaccaatttttatcgagtcgaactcagacaagtttgactcgactcggctcatttc 215  Q
    |||||||| || ||||| ||| |||||||||||| ||||||||||| ||||||||    
T  43090105 aaccaattcttgtcgagccgagctcagacaagttcgactcgactcgactcatttc 43090159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 29 - 178
Target Start/End: Complemental strand, 7994944 - 7994796
Alignment:
Q  29 gtttgtgaaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaagg 128  Q
    |||||||||||||||  || ||||||||||||||||||||| ||| | ||||||||| ||||| ||||||| |||||| ||||||   ||||||| ||||    
T  7994944 gtttgtgaaatataccgtttgagtaaacgagttgaacctaacgagtcgaatcgaactattcgtaaactttatacgagctgaactcgtgctaaaaa-aagg 7994846  T
Q  129 ttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagt 178  Q
    ||||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  7994845 ttcgtttcgaactcgagtcgagtttcgagctgaatcaattcttatcgagt 7994796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 34 - 215
Target Start/End: Original strand, 5205055 - 5205242
Alignment:
Q  34 tgaaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatct-aaaaagaaggttcg 132  Q
    |||| ||||||| ||||||| ||||||||||||||| ||||| || |||  |||||| |||||||||| ||| ||||||  |  | ||||| ||||||||    
T  5205055 tgaagtatacaaatcgagtagacgagttgaacctaacgagccgaaccgagttgttcgcgaactttaaatgagtcgaacttgaggtaaaaaaaaaggttcg 5205154  T
Q  133 ttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaa-----ctcagacaagtttgactcgactcggctcatttc 215  Q
    |||  ||||||||||||||||||||| ||||||||| |||| ||||||||     |||||||| ||| ||||||||||| ||||||||    
T  5205155 tttcaaactcgagtcgagtttcgagccgaaccaattcttatggagtcgaatcgagctcagacaggttcgactcgactcgactcatttc 5205242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 181
Target Start/End: Original strand, 37441788 - 37441906
Alignment:
Q  63 aacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaa 162  Q
    ||||||| ||||| || |||||||||||||||||||||||||||||||||| | || |||| |  |||||| | ||||||||| |||||||||||| |||    
T  37441788 aacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgagtttcgagccgaa 37441887  T
Q  163 ccaatttttatcgagtcga 181  Q
    |||||| ||||||||||||    
T  37441888 ccaattcttatcgagtcga 37441906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 181
Target Start/End: Original strand, 15257792 - 15257939
Alignment:
Q  34 tgaaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgt 133  Q
    |||||||| ||||| ||| ||| ||| ||||||||| ||| | || |||   |||||||||||||||||||||||||||| | ||| ||| | |||||||    
T  15257792 tgaaatatgcaatttgagcaaatgaggtgaacctaacgagtcgaaccgagtggttcgtgaactttaaacgagccgaactcgagctagaaaaatggttcgt 15257891  T
Q  134 tttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcga 181  Q
    || ||||||||  |||||||||||| ||||||||| ||||||||||||    
T  15257892 ttcgaactcgaaccgagtttcgagccgaaccaattcttatcgagtcga 15257939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 181
Target Start/End: Original strand, 29678050 - 29678197
Alignment:
Q  34 tgaaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgt 133  Q
    |||||||| ||||| ||| ||| |||||| |||||| ||||| ||  ||  || |||||||||||||||||||||||||| |  | |||| |||||||||    
T  29678050 tgaaatatgcaatttgagcaaatgagttggacctaacgagccgaacagagttgctcgtgaactttaaacgagccgaactcgagatgaaaaaaaggttcgt 29678149  T
Q  134 tttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcga 181  Q
    || ||||| |||||||||||||||| |||||| || ||||||||||||    
T  29678150 ttcgaacttgagtcgagtttcgagccgaaccatttcttatcgagtcga 29678197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 85 - 215
Target Start/End: Complemental strand, 44595966 - 44595837
Alignment:
Q  85 tgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaact 184  Q
    |||||||||||||||||||||||||||| ||  |||||| | ||||||| | |||||| ||||||||||||| | ||||||||| |||||||||||| ||    
T  44595966 tgttcgtgaactttaaacgagccgaacttaagttaaaaa-agggttcgtatcgaactcaagtcgagtttcgaaccgaaccaattcttatcgagtcgagct 44595868  T
Q  185 cagacaagtttgactcgactcggctcatttc 215  Q
    |||||| ||| |  |||||||| ||||||||    
T  44595867 cagacaggttcggttcgactcgactcatttc 44595837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 36418687 - 36418567
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||||| || ||||||||||||||||||||||||| |||||||| | || |||| |   ||||| | ||||||||| |||||||||||| |    
T  36418687 tgaacctaacgagccgaaccgaactgttcgtgaactttaaacgaaccgaactcgagctgaaaaaataattcgtgtcgaactcgagccgagtttcgagccg 36418588  T
Q  161 aaccaatttttatcgagtcga 181  Q
    |||||||| ||||||||||||    
T  36418587 aaccaattcttatcgagtcga 36418567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 86 - 215
Target Start/End: Complemental strand, 7955791 - 7955657
Alignment:
Q  86 gttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaattttta-----tcgagtcg 180  Q
    |||||||||||||||||||||||||||| | ||| ||| ||| ||||||| ||||||||  |||||||||||| ||||||||| |||     ||||||||    
T  7955791 gttcgtgaactttaaacgagccgaactcgagctagaaaaaagattcgtttcgaactcgaaccgagtttcgagccgaaccaattcttattgagtcgagtcg 7955692  T
Q  181 aactcagacaagtttgactcgactcggctcatttc 215  Q
    | ||||||||  || ||||||||||| ||||||||    
T  7955691 agctcagacagattcgactcgactcgactcatttc 7955657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 205
Target Start/End: Complemental strand, 3577081 - 3576961
Alignment:
Q  85 tgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaact 184  Q
    ||||||||||||||||||||||||||||| |  |||| | || ||| || | |||||| | ||||||||||||||||||||||| ||||| ||||||  |    
T  3577081 tgttcgtgaactttaaacgagccgaactcgagttaaataaaatgtttgtatcgaactcaaatcgagtttcgagctgaaccaattcttatcaagtcgagat 3576982  T
Q  185 cagacaagtttgactcgactc 205  Q
     ||||||||| ||||||||||    
T  3576981 tagacaagttcgactcgactc 3576961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 34 - 112
Target Start/End: Complemental strand, 28005900 - 28005822
Alignment:
Q  34 tgaaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaact 112  Q
    |||| ||||||||||||||| ||||||||||||||| ||||| ||  ||| |||||| |||||||||||||||||||||    
T  28005900 tgaagtatacaattcgagtagacgagttgaacctaacgagccgaactgaattgttcgcgaactttaaacgagccgaact 28005822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 85 - 215
Target Start/End: Complemental strand, 47982803 - 47982674
Alignment:
Q  85 tgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaact 184  Q
    |||| |||||||||||||||  | ||||| |  |||||| || ||||||||||||||||||||||||||||| | ||||| ||| || | ||||||| ||    
T  47982803 tgtttgtgaactttaaacgaatcaaactcgagttaaaaa-aatgttcgttttgaactcgagtcgagtttcgaaccgaaccgattcttgttgagtcgagct 47982705  T
Q  185 cagacaagtttgactcgactcggctcatttc 215  Q
     ||||| ||| ||||||||||| ||||||||    
T  47982704 tagacaggttcgactcgactcgactcatttc 47982674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 125 - 190
Target Start/End: Original strand, 42936351 - 42936416
Alignment:
Q  125 aaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaactcagaca 190  Q
    |||||||||||||||| | |||  ||||||||||||||||||||||||||||||||| ||||||||    
T  42936351 aaggttcgttttgaacacaagttaagtttcgagctgaaccaatttttatcgagtcgagctcagaca 42936416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 132 - 215
Target Start/End: Original strand, 573276 - 573359
Alignment:
Q  132 gttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaactcagacaagtttgactcgactcggctcatttc 215  Q
    ||||||||||| | | ||||||| | ||||| |||||||||| ||| ||||||||||| |||||||||||||||| ||||||||    
T  573276 gttttgaactcaaattgagtttcaaactgaatcaatttttattgagacgaactcagacgagtttgactcgactcgactcatttc 573359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 215
Target Start/End: Original strand, 21681587 - 21681754
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtt 152  Q
    ||||||| ||||||||| ||||| || |||||| ||| |||| ||||||||||  |||| | | || |||| |  |||||| | ||||||||| ||||||    
T  21681587 aaacgagctgaacctaacgagccgaaccgaactattcatgaattttaaacgagttgaacccgagctgaaaaaatagttcgtgtcgaactcgagccgagtt 21681686  T
Q  153 tcgagctgaaccaatttttatcgagtc-----gaactcagacaagtttgactcgactcggctcatttc 215  Q
    |  ||||||||||||| ||||||||||     || ||||| || ||| ||||||||||||||||||||    
T  21681687 ttaagctgaaccaattcttatcgagtcgagttgagctcaggcaggttcgactcgactcggctcatttc 21681754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 46265573 - 46265632
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaact 112  Q
    |||||| |||||||||||||||| || | |||||||||||||||||||||||||||||||    
T  46265573 aaacgaattgaacctaatgagccgaaccaaactgttcgtgaactttaaacgagccgaact 46265632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 181
Target Start/End: Complemental strand, 32179490 - 32179380
Alignment:
Q  71 gagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttt 170  Q
    ||||| || ||||||||||||||| |||||||||||||||||| | || |||| |  |||||| |  ||||| || |||||||||||| ||||||||| |    
T  32179490 gagccgaaccgaactgttcgtgaattttaaacgagccgaactcgagctgaaaaaatagttcgtgtcaaactcaagccgagtttcgagccgaaccaattct 32179391  T
Q  171 tatcgagtcga 181  Q
    |||||| ||||    
T  32179390 tatcgaatcga 32179380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 61 - 183
Target Start/End: Complemental strand, 35309171 - 35309053
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||||| ||  ||||||||||| ||||||||| ||||||||||| | || |||| |    |||| | ||||||||  |||||||||||| |    
T  35309171 tgaacctaacgagccgaacggaactgttcgtaaactttaaatgagccgaactcgagctgaaaaaa----tcgtgtggaactcgaaccgagtttcgagccg 35309076  T
Q  161 aaccaatttttatcgagtcgaac 183  Q
    |||||||| ||||||||||||||    
T  35309075 aaccaattcttatcgagtcgaac 35309053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 85 - 214
Target Start/End: Complemental strand, 36118367 - 36118239
Alignment:
Q  85 tgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaact 184  Q
    ||||||||||||  ||||||| ||||||| | ||||||| || ||| || | ||||| |||| |||||| |||||||| ||||| |||||||||||| ||    
T  36118367 tgttcgtgaactacaaacgagtcgaactcgagctaaaaa-aatgtttgtatcgaacttgagttgagttttgagctgaatcaattcttatcgagtcgagct 36118269  T
Q  185 cagacaagtttgactcgactcggctcattt 214  Q
    |||| ||||| |  |||||||| |||||||    
T  36118268 cagataagttcggatcgactcgactcattt 36118239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 107 - 215
Target Start/End: Original strand, 38061638 - 38061751
Alignment:
Q  107 cgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaa-----ctcagacaagtttgactcg 201  Q
    ||||||| | || |||| |||||||| || ||||||||||||| ||| |||| ||||||||| |||||||||||||     |||||||| ||| ||||||    
T  38061638 cgaactcgagcttaaaaaaaggttcgcttcgaactcgagtcgaattttgagccgaaccaattcttatcgagtcgaatcgagctcagacaggttcgactcg 38061737  T
Q  202 actcggctcatttc 215  Q
    ||||| ||||||||    
T  38061738 actcgactcatttc 38061751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 24470499 - 24470551
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactc 113  Q
    ||||||||| ||||| || ||||||||||||||||||||||||||||||||||    
T  24470499 tgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactc 24470551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 42916731 - 42916790
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaact 112  Q
    |||||| |||||||||||||||| || | ||||||||||||||||||| |||||||||||    
T  42916731 aaacgaattgaacctaatgagccgaaccaaactgttcgtgaactttaagcgagccgaact 42916790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 53 - 111
Target Start/End: Complemental strand, 15662465 - 15662407
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaac 111  Q
    |||||| |||||||||||||| | || | ||||||||||||||||||||||||||||||    
T  15662465 aaacgaattgaacctaatgagtcgaaccaaactgttcgtgaactttaaacgagccgaac 15662407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 30211902 - 30211808
Alignment:
Q  88 tcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaa 182  Q
    ||||||| |||||| ||| ||||||| ||| ||||| |||  |||| | |||||||||| ||||||||||| |||| ||||||||||||| ||||    
T  30211902 tcgtgaattttaaatgagtcgaactcgatccaaaaataagaatcgtatcgaactcgagttgagtttcgagccgaactaatttttatcgagccgaa 30211808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 205
Target Start/End: Complemental strand, 31869032 - 31868907
Alignment:
Q  85 tgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaattttta-----tcgagtc 179  Q
    ||||||||||||||||||||||||||| | |  | |||| | |||| || | |||||||||||||||||||||| ||  ||||| |||     ||||| |    
T  31869032 tgttcgtgaactttaaacgagccgaacccgagtttaaaaaatggtttgtatcgaactcgagtcgagtttcgagccgagtcaattcttattgagtcgagcc 31868933  T
Q  180 gaactcagacaagtttgactcgactc 205  Q
    || ||||||| |||||||||||||||    
T  31868932 gagctcagacgagtttgactcgactc 31868907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 145
Target Start/End: Original strand, 38061582 - 38061647
Alignment:
Q  80 cgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgag 145  Q
    ||||||||||||||| |||||||||||||||||| | || |||| | ||||||||| |||||||||    
T  38061582 cgaactgttcgtgaattttaaacgagccgaactcgagcttaaaaaatggttcgtttcgaactcgag 38061647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 25125386 - 25125438
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactc 113  Q
    ||||||||||||||| || | ||||||| ||||||||||||||||||||||||    
T  25125386 tgaacctaatgagccgaaccaaactgtttgtgaactttaaacgagccgaactc 25125438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 45654340 - 45654460
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||||| || |||||| ||| | ||||||||||||| ||||| | | || |||| |   ||||| | ||||||||| ||| |||| |||||    
T  45654340 tgaacctaacgagccgaaccgaactattcataaactttaaacgagtcgaacccgagctgaaaaaataattcgtgtcgaactcgagccgaatttcaagctg 45654439  T
Q  161 aaccaatttttatcgagtcga 181  Q
    |||||||| ||||||||||||    
T  45654440 aaccaattcttatcgagtcga 45654460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 14578996 - 14579055
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaact 112  Q
    |||||| |||||||||||||| | || | ||||||||||||| |||||||||||||||||    
T  14578996 aaacgaattgaacctaatgagtcgaaccaaactgttcgtgaattttaaacgagccgaact 14579055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 112
Target Start/End: Complemental strand, 35810284 - 35810226
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaact 112  Q
    |||||| |||||||||||||||| || | |||||||||||||| ||||||||||||||||    
T  35810284 aaacgaattgaacctaatgagccgaaccaaactgttcgtgaac-ttaaacgagccgaact 35810226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 105
Target Start/End: Original strand, 42936278 - 42936348
Alignment:
Q  35 gaaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgag 105  Q
    |||||||| |||| || || | |||||||||||||||| || ||||||  |||||||||||||||||||||    
T  42936278 gaaatatataatttgactagatgagttgaacctaatgaaccgaatcgagttgttcgtgaactttaaacgag 42936348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 38061545 - 38061582
Alignment:
Q  29 gtttgtgaaatatacaattcgagtaaacgagttgaacc 66  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  38061545 gtttgtgaaatatacaattcgagtaaacgagctgaacc 38061582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 7595888 - 7595836
Alignment:
Q  60 ttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaact 112  Q
    |||||||||||||||| || | || ||| ||||||||||||||||||||||||    
T  7595888 ttgaacctaatgagccgaaccaaattgtccgtgaactttaaacgagccgaact 7595836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 15014179 - 15014119
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactc 113  Q
    |||||| |||||  ||||||||| || | || |||||||||||||||||||||||||||||    
T  15014179 aaacgaattgaatataatgagccgaaccaaattgttcgtgaactttaaacgagccgaactc 15014119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 28005826 - 28005782
Alignment:
Q  137 gaactcgagtcgagtttcgagctgaaccaatttttatcgagtcga 181  Q
    ||||| |||||||||||||||| ||||||||| ||||||||||||    
T  28005826 gaacttgagtcgagtttcgagccgaaccaattcttatcgagtcga 28005782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 40160347 - 40160403
Alignment:
Q  149 agtttcgagctgaaccaatttttatcgagtcgaactcagacaagtttgactcgactc 205  Q
    |||||||||  ||||||||| |||||||||||| ||||||||| || ||||||||||    
T  40160347 agtttcgagtcgaaccaattcttatcgagtcgagctcagacaaattcgactcgactc 40160403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 42936672 - 42936612
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactc 113  Q
    |||||| ||||||||| ||| |  || | ||||||||||||||||||||||||||||||||    
T  42936672 aaacgaattgaacctattgaactgaaccaaactgttcgtgaactttaaacgagccgaactc 42936612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 181
Target Start/End: Original strand, 45582092 - 45582192
Alignment:
Q  81 gaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcg 180  Q
    ||||| |||| ||||||||||||| |||||||| | || |||| || || ||| | |||||| |  ||||||||||||||||| |||  |||||||||||    
T  45582092 gaactattcgcgaactttaaacgaaccgaactcgagctgaaaaaaaagtccgtgtcgaactcaaaccgagtttcgagctgaactaatccttatcgagtcg 45582191  T
Q  181 a 181  Q
    |    
T  45582192 a 45582192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 48575709 - 48575805
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgag 157  Q
    ||||| ||||||| | |||| || ||||| |||||||||||||||  |||||| | || |||| |  |||||| ||||||| |||||||||||||||    
T  48575709 tgaacttaatgagtcgaatcaaattgttcatgaactttaaacgagttgaactcgagctgaaaaaagagttcgtgttgaacttgagtcgagtttcgag 48575805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 138 - 181
Target Start/End: Original strand, 13645766 - 13645809
Alignment:
Q  138 aactcgagtcgagtttcgagctgaaccaatttttatcgagtcga 181  Q
    ||||||||||||||||||||| ||||||||| | ||||||||||    
T  13645766 aactcgagtcgagtttcgagccgaaccaattctaatcgagtcga 13645809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 15014066 - 15014023
Alignment:
Q  172 atcgagtcgaactcagacaagtttgactcgactcggctcatttc 215  Q
    |||||||||| ||||||||||||||| |||||||| ||||||||    
T  15014066 atcgagtcgagctcagacaagtttgattcgactcgactcatttc 15014023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 112
Target Start/End: Complemental strand, 23916305 - 23916246
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaact 112  Q
    |||||| ||||| ||||||| || || | ||||||||||| |||||||||||||||||||    
T  23916305 aaacgaattgaatctaatgaaccgaaccaaactgttcgtggactttaaacgagccgaact 23916246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 35635011 - 35634966
Alignment:
Q  169 tttatcgagtcgaactcagacaagtttgactcgactcggctcattt 214  Q
    ||||| ||||||| |||||||||||| ||||||||||| |||||||    
T  35635011 tttattgagtcgagctcagacaagttcgactcgactcgactcattt 35634966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 182
Target Start/End: Complemental strand, 50445573 - 50445528
Alignment:
Q  137 gaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaa 182  Q
    ||||| |||||||||||||||||||| ||||| ||| |||||||||    
T  50445573 gaactagagtcgagtttcgagctgaatcaattcttaacgagtcgaa 50445528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 14770836 - 14770888
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactc 113  Q
    ||||||||| ||||| || | |||||||  |||||||||||||||||||||||    
T  14770836 tgaacctaacgagccgaaccaaactgtttctgaactttaaacgagccgaactc 14770888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 47603463 - 47603499
Alignment:
Q  142 cgagtcgagtttcgagctgaaccaatttttatcgagt 178  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  47603463 cgagtcgagtttcgagccgaaccaattcttatcgagt 47603499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 56 - 205
Target Start/End: Original strand, 1381 - 1530
Alignment:
Q  56 cgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcg 155  Q
    |||||||||||||| ||||| || | |  |||||||||||||||||||||||||||||||  || | | |||||||||||  ||||||||||||||||||    
T  1381 cgagttgaacctaacgagccgaaccaagttgttcgtgaactttaaacgagccgaactcaagttagagaaaaggttcgtttcaaactcgagtcgagtttcg 1480  T
Q  156 agctgaaccaatttttatcgagtcgaactcagacaagtttgactcgactc 205  Q
    ||| ||||||||| |||||||||||| |||||||| ||| ||||||||||    
T  1481 agccgaaccaattcttatcgagtcgagctcagacaggttcgactcgactc 1530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 3e-36; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 45 - 215
Target Start/End: Complemental strand, 7834242 - 7834070
Alignment:
Q  45 attcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaa--ggttcgttttgaactc 142  Q
    ||||||| |||||||||||||||||||||   || |||||||||||||||||||||| |||| |||||| | ||||||| ||  |||||||||  |||||    
T  7834242 attcgagcaaacgagttgaacctaatgagttgaaccgaactgttcgtgaactttaaatgagctgaactcgagctaaaaaaaaaaggttcgtttcaaactc 7834143  T
Q  143 gagtcgagtttcgagctgaaccaatttttatcgagtcgaactcagacaagtttgactcgactcggctcatttc 215  Q
    || | |||||| |||||||||||||| ||||||||||||  ||||||| ||| ||||||||||| ||||||||    
T  7834142 gaattgagttttgagctgaaccaattcttatcgagtcgagttcagacaggttcgactcgactcgactcatttc 7834070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 55 - 215
Target Start/End: Complemental strand, 25253047 - 25252882
Alignment:
Q  55 acgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttc 154  Q
    ||||||||||||||||||| | | |||| |||||||||||||||||||||||||||||| | || || | || |||||| |||||||||||||||||||     
T  25253047 acgagttgaacctaatgagtcgagtcgagctgttcgtgaactttaaacgagccgaactcgagcttaacaaaaagttcgtattgaactcgagtcgagtttt 25252948  T
Q  155 gagctgaaccaatttttatcgagtc-----gaactcagacaagtttgactcgactcggctcatttc 215  Q
    |||| ||||||||| ||||||||||     || |||||||| ||| ||||||||||| ||||||||    
T  25252947 gagccgaaccaattcttatcgagtcgagttgagctcagacaggttcgactcgactcgactcatttc 25252882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 5418183 - 5418051
Alignment:
Q  88 tcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagt-----cgaa 182  Q
    ||||||||||||||||||| ||| || | |  |||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||     ||||    
T  5418183 tcgtgaactttaaacgagctgaaatcgagcccaaaaaaaggttcgttttgaactcgagtcgagtttcgagccgaaccaattcttatcgagtcaagccgaa 5418084  T
Q  183 ctcagacaagtttgactcgactcggctcatttc 215  Q
    |||||||||||| ||||||||||| ||||||||    
T  5418083 ctcagacaagttcgactcgactcgactcatttc 5418051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 34 - 181
Target Start/End: Complemental strand, 12710254 - 12710107
Alignment:
Q  34 tgaaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaa-aaagaaggttcg 132  Q
    |||| ||||||||||||||| ||||||||||||||| ||||| || |||  |||||| |||||||||||||||||||||| |  ||| ||| ||||||||    
T  12710254 tgaagtatacaattcgagtagacgagttgaacctaacgagccgaaccgagttgttcgcgaactttaaacgagccgaactcgagttaagaaaaaaggttcg 12710155  T
Q  133 ttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcga 181  Q
    |||  ||||||||||||||||||||| | ||||||| ||||||||||||    
T  12710154 tttcaaactcgagtcgagtttcgagccg-accaattcttatcgagtcga 12710107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 181
Target Start/End: Original strand, 39471054 - 39471172
Alignment:
Q  63 aacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaa 162  Q
    ||||||| ||||| |||||||||||||||||||||||||||||| |||||| | || |||| |  |||||| | ||||||||| |||||||||||| |||    
T  39471054 aacctaacgagccgaatcgaactgttcgtgaactttaaacgagctgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgagtttcgagccgaa 39471153  T
Q  163 ccaatttttatcgagtcga 181  Q
    |||||| ||||||||||||    
T  39471154 ccaattcttatcgagtcga 39471172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 45 - 214
Target Start/End: Original strand, 7521697 - 7521866
Alignment:
Q  45 attcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcga 144  Q
    ||||||| |||  |||||||||||| ||| |||| ||| ||||||||||| ||||||| || | ||||  |  |||||| ||| ||||||| ||||||||    
T  7521697 attcgagcaaataagttgaacctaacgagtcaaaccgagctgttcgtgaattttaaacaagtcaaacttgagttaaaaaaaagattcgtttcgaactcga 7521796  T
Q  145 gtcgagtttcgagctgaaccaatttttatcgagtcgaactcagacaagtttgactcgactcggctcattt 214  Q
    |||||||||||||| |||| ||||||||||||||| | |||||| ||||| |  |||||||| |||||||    
T  7521797 gtcgagtttcgagccgaacgaatttttatcgagtctagctcagataagttcggttcgactcgactcattt 7521866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 77 - 181
Target Start/End: Complemental strand, 33896067 - 33895963
Alignment:
Q  77 aatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcga 176  Q
    |||||| ||||||||||||||||||||||||||| || | ||||||| ||||||||| | ||||||||||||||||| ||||||||||| || |||| ||    
T  33896067 aatcgagctgttcgtgaactttaaacgagccgaattcgagctaaaaaaaaggttcgtgtcgaactcgagtcgagtttggagctgaaccatttcttattga 33895968  T
Q  177 gtcga 181  Q
    |||||    
T  33895967 gtcga 33895963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 181
Target Start/End: Original strand, 39943696 - 39943825
Alignment:
Q  52 taaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagt 151  Q
    |||||||  ||||||||  ||||| ||  ||||||| |||||||||||||| |||||||||||| || |||| || |||||| |  |||||||| |||||    
T  39943696 taaacgaaatgaacctatcgagccgaactgaactgtacgtgaactttaaacaagccgaactcaagctgaaaaaaaagttcgtgtcaaactcgagccgagt 39943795  T
Q  152 ttcgagctgaaccaatttttatcgagtcga 181  Q
    ||||||||||||||||| ||||||||||||    
T  39943796 ttcgagctgaaccaattcttatcgagtcga 39943825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 32688726 - 32688606
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||||| || |||||||||||||||||||||||||||||||||| | || |||| |  |||| | |  ||||||||  ||||||||||| |    
T  32688726 tgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcatgtcaaactcgagctgagtttcgagccg 32688627  T
Q  161 aaccaatttttatcgagtcga 181  Q
    |||||||||||||||||||||    
T  32688626 aaccaatttttatcgagtcga 32688606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 30740872 - 30740781
Alignment:
Q  88 tcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtc 179  Q
    |||||||||||||||||||||||||| | ||||||| ||||||||| | ||||||||||||||||||||||  ||||| || ||||||||||    
T  30740872 tcgtgaactttaaacgagccgaactcgagctaaaaaaaaggttcgtgtcgaactcgagtcgagtttcgagccaaaccatttcttatcgagtc 30740781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 178
Target Start/End: Complemental strand, 40943078 - 40942945
Alignment:
Q  44 aattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcg 143  Q
    |||| ||||||| ||| ||||||||| ||| | || |||   |||||||||||||||| ||||||||||| | ||| ||| |||||||||||||||||||    
T  40943078 aatttgagtaaatgaggtgaacctaacgagtcgaaccgagtggttcgtgaactttaaatgagccgaactcgagctagaaa-aaggttcgttttgaactcg 40942980  T
Q  144 agtcgagtttcgagctgaaccaatttttatcgagt 178  Q
    || |||||||||||  ||||||||| |||||||||    
T  40942979 agccgagtttcgagtcgaaccaattcttatcgagt 40942945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 45 - 179
Target Start/End: Complemental strand, 20661858 - 20661724
Alignment:
Q  45 attcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactc-aatctaaaaagaaggttcgttttgaactcg 143  Q
    |||||||| || ||| ||||||||| ||||| || |||  |||||||||||||||||||||| |||||| || || |||| |||||| || |  |||||     
T  20661858 attcgagttaatgagatgaacctaacgagccgaaccgagttgttcgtgaactttaaacgagctgaactcgaaccttaaaa-aaggtttgtatcaaactca 20661760  T
Q  144 agtcgagtttcgagctgaaccaatttttatcgagtc 179  Q
    ||||||||||||||||||| ||||||||||||||||    
T  20661759 agtcgagtttcgagctgaatcaatttttatcgagtc 20661724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 145
Target Start/End: Original strand, 54432839 - 54432948
Alignment:
Q  36 aaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttt 135  Q
    |||||| ||||| ||| ||| ||| ||||||||| ||| | || |||  |||||||||| |||||||||||||||||| | ||||||| |||||||||||    
T  54432839 aaatatgcaatttgagcaaatgaggtgaacctaacgagtcgaaccgagttgttcgtgaattttaaacgagccgaactcgagctaaaaaaaaggttcgttt 54432938  T
Q  136 tgaactcgag 145  Q
    ||||||||||    
T  54432939 tgaactcgag 54432948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 34 - 182
Target Start/End: Original strand, 30662709 - 30662857
Alignment:
Q  34 tgaaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgt 133  Q
    |||| |||| |||||||||| ||||||||||||||| ||||| ||  ||  |||||  |||||||||||||||| ||||  |  |||||| |||||| ||    
T  30662709 tgaagtatataattcgagtagacgagttgaacctaacgagccgaactgagttgttcacgaactttaaacgagccaaacttgagttaaaaaaaaggtttgt 30662808  T
Q  134 tttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaa 182  Q
    ||  ||||||||| ||||||||| | ||| ||||| |||||||||||||    
T  30662809 ttcaaactcgagttgagtttcgaaccgaatcaattcttatcgagtcgaa 30662857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 150
Target Start/End: Original strand, 26050078 - 26050196
Alignment:
Q  34 tgaaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaa--tctaaaaagaaggttc 131  Q
    |||||||||||||||||||| | ||||||||| ||| ||||| || |||  |||||| |||||||||||||||||||||| |  |  ||||| |||||||    
T  26050078 tgaaatatacaattcgagtagatgagttgaacttaacgagccgaaccgagttgttcgcgaactttaaacgagccgaactcgagttaaaaaaaaaaggttc 26050177  T
Q  132 gttttgaactcgagtcgag 150  Q
    ||||  |||||||||||||    
T  26050178 gtttcaaactcgagtcgag 26050196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 224
Target Start/End: Original strand, 46294229 - 46294378
Alignment:
Q  80 cgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaattttta-----tc 174  Q
    ||||||||||| |||| |||||||||| |||||| | ||||||| |  |||||| |  | ||||||||||||||||| ||||||||||| |||     ||    
T  46294229 cgaactgttcgcgaaccttaaacgagctgaactcgagctaaaaaaagagttcgtgtcaatctcgagtcgagtttcgaactgaaccaattcttattgcgtc 46294328  T
Q  175 gagtcgaactcagacaagtttgactcgactcggctcatttcaagtcctaa 224  Q
    ||| ||| ||||||| |||| ||||||||||| |||||||| || |||||    
T  46294329 gagccgagctcagacgagttcgactcgactcgactcatttccagccctaa 46294378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 181
Target Start/End: Complemental strand, 7029277 - 7029182
Alignment:
Q  85 tgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcga 181  Q
    ||||||| |||||||||||||||||||| || || |||| ||  ||||| | ||||||||| ||||||||||||||||| |||| ||||||||||||    
T  7029277 tgttcgtaaactttaaacgagccgaacttaaacttaaaaaaaa-ttcgtgtcgaactcgagccgagtttcgagctgaacaaattcttatcgagtcga 7029182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 224
Target Start/End: Original strand, 19561403 - 19561543
Alignment:
Q  84 ctgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaac 183  Q
    |||||||  |||||||||||| |||||||||| || |||| || ||| || | |||||||| |||||||| || || ||| |||| |||||||||||| |    
T  19561403 ctgttcgataactttaaacgaaccgaactcaagcttaaaaaaaagtttgtatcgaactcgaatcgagttttgaactaaactaattcttatcgagtcgagc 19561502  T
Q  184 tcagacaagtttgactcgactcggctcatttcaagtcctaa 224  Q
    |||||| | ||  |||||||||| |||||||| || |||||    
T  19561503 tcagacgaattcaactcgactcgactcatttccagccctaa 19561543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 33439208 - 33439267
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaact 112  Q
    |||||| |||||||||||||||| || | |||||||||||||||||||||||| ||||||    
T  33439208 aaacgaattgaacctaatgagccgaaccaaactgttcgtgaactttaaacgagtcgaact 33439267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 181
Target Start/End: Original strand, 38644191 - 38644317
Alignment:
Q  54 aacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagttt 153  Q
    ||||| |||||||||| ||| | || |||||| |||||||||||||||| || |||| || | || |||| ||| ||||| | |||||||||||||||||    
T  38644191 aacgaattgaacctaacgagtcgaaccgaactattcgtgaactttaaacaagtcgaattcgagctgaaaaaaag-ttcgtgtcgaactcgagtcgagttt 38644289  T
Q  154 cgagctgaaccaatttttatcgagtcga 181  Q
     |||| |||| |||| ||||| ||||||    
T  38644290 tgagccgaacaaattcttatctagtcga 38644317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 54394018 - 54394077
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaact 112  Q
    |||||| |||||||||||||||| ||   |||||||||||||||||||||||||||||||    
T  54394018 aaacgaattgaacctaatgagccgaactaaactgttcgtgaactttaaacgagccgaact 54394077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 190
Target Start/End: Original strand, 33152038 - 33152160
Alignment:
Q  68 aatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaat 167  Q
    |||||||| ||||||  ||||||| |||||||||  ||||||||| ||  | |||| || ||| |||| |||||| ||||||||||||||| |||| |||    
T  33152038 aatgagccgaatcgagttgttcgtaaactttaaataagccgaacttaagttgaaaaaaatgtttgtttcgaactcaagtcgagtttcgagccgaacaaat 33152137  T
Q  168 ttttatcgagtcgaactcagaca 190  Q
    |   |||||||||||||| ||||    
T  33152138 tcacatcgagtcgaactcggaca 33152160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 8086983 - 8087036
Alignment:
Q  137 gaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaactcagaca 190  Q
    ||||| ||||||||||||||||||||| || |||||||||||||| ||||||||    
T  8086983 gaactagagtcgagtttcgagctgaacaaaattttatcgagtcgagctcagaca 8087036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 23206910 - 23206962
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactc 113  Q
    ||||||||| ||| | || ||||||||||||||||||||||||||||||||||    
T  23206910 tgaacctaacgagtcgaaccgaactgttcgtgaactttaaacgagccgaactc 23206962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 54 - 158
Target Start/End: Complemental strand, 52198950 - 52198846
Alignment:
Q  54 aacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagttt 153  Q
    ||||| |||||||||| ||||| || | ||||||| |||||||||||||||| | || || | || |||| |  |||||| | |||||||||||||||||    
T  52198950 aacgaattgaacctaacgagccgaaccaaactgtttgtgaactttaaacgagtcaaattcgagctgaaaaaagagttcgtgtcgaactcgagtcgagttt 52198851  T
Q  154 cgagc 158  Q
    |||||    
T  52198850 cgagc 52198846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 20407790 - 20407843
Alignment:
Q  128 gttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcga 181  Q
    |||||| | |||||||||||||||||||||| ||||||||  ||||||||||||    
T  20407790 gttcgtatcgaactcgagtcgagtttcgagccgaaccaatacttatcgagtcga 20407843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 31085579 - 31085526
Alignment:
Q  128 gttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcga 181  Q
    ||||||||||||||| ||||||||||  || ||||| |||||||||||||||||    
T  31085579 gttcgttttgaactcaagtcgagttttaaggtgaacaaatttttatcgagtcga 31085526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 215
Target Start/End: Original strand, 27040592 - 27040676
Alignment:
Q  136 tgaactcgagtcgagtttcgagctgaaccaattttta-----tcgagtcgaactcagacaagtttgactcgactcggctcatttc 215  Q
    ||||||||||||||||||||||| ||||||| | |||     |||||| || |||| ||||||| ||||||||||| ||||||||    
T  27040592 tgaactcgagtcgagtttcgagccgaaccaaatcttaacgagtcgagttgagctcaaacaagttcgactcgactcgactcatttc 27040676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 39133869 - 39133825
Alignment:
Q  137 gaactcgagtcgagtttcgagctgaaccaatttttatcgagtcga 181  Q
    ||||||||| |||||||||||| ||||||||| ||||||||||||    
T  39133869 gaactcgagccgagtttcgagccgaaccaattcttatcgagtcga 39133825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 112
Target Start/End: Complemental strand, 45994965 - 45994906
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaact 112  Q
    |||||| ||||||  |||||||| || | ||||||| |||||||||||||||||||||||    
T  45994965 aaacgaattgaactcaatgagccgaaccaaactgtttgtgaactttaaacgagccgaact 45994906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 190
Target Start/End: Original strand, 9505820 - 9505943
Alignment:
Q  57 gagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcga 156  Q
    ||||||||  ||||||||| ||||||  |||||||||||||||||||||| ||| ||          || |||| || | |||||||||| |||||||||    
T  9505820 gagttgaatataatgagccgaatcgagttgttcgtgaactttaaacgagctgaattc----------gagggtttgtatcgaactcgagttgagtttcga 9505909  T
Q  157 gctgaaccaatttttatcgagtcgaactcagaca 190  Q
    || ||| ||||| ||||||||||||  |||||||    
T  9505910 gccgaatcaattcttatcgagtcgagttcagaca 9505943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 112
Target Start/End: Original strand, 53530151 - 53530181
Alignment:
Q  82 aactgttcgtgaactttaaacgagccgaact 112  Q
    |||||||||||||||||||||||||||||||    
T  53530151 aactgttcgtgaactttaaacgagccgaact 53530181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 15823183 - 15823280
Alignment:
Q  91 tgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaactcaga 188  Q
    ||||| ||||||||| ||||||| | || |||| |  |||| | | |||||||||||||||||||||| || | || |||||||||| ||| ||||||    
T  15823183 tgaaccttaaacgagtcgaactcgagctgaaaaaagagttcatgtcgaactcgagtcgagtttcgagccgagcaaaattttatcgagccgagctcaga 15823280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 75
Target Start/End: Original strand, 20552016 - 20552057
Alignment:
Q  34 tgaaatatacaattcgagtaaacgagttgaacctaatgagcc 75  Q
    |||||||| ||||||||| ||||||||| |||||||||||||    
T  20552016 tgaaatatgcaattcgagcaaacgagttaaacctaatgagcc 20552057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 215
Target Start/End: Original strand, 25633823 - 25633892
Alignment:
Q  146 tcgagtttcgagctgaaccaatttttatcgagtcgaactcagacaagtttgactcgactcggctcatttc 215  Q
    |||||||||||||| |||||| | | || ||||||| |||||||| ||| || |||| ||||||||||||    
T  25633823 tcgagtttcgagcttaaccaaatctcattgagtcgagctcagacaggttcgagtcgattcggctcatttc 25633892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 2868844 - 2868888
Alignment:
Q  138 aactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaa 182  Q
    ||||| ||||||||||  || ||||||||||||||||||||||||    
T  2868844 aactctagtcgagttttaagttgaaccaatttttatcgagtcgaa 2868888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 61 - 206
Target Start/End: Complemental strand, 33109999 - 33109849
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||||||||||||  || || ||||||||||||||||||||||| | |  |||| |||||||||||||||||||||||||||||||||| |    
T  33109999 tgaacctaacgagccaaatcgagttgctcatgaactttaaacgagccgaactcgagcccaaaaaaaggttcgttttgaactcgagtcgagtttcgagccg 33109900  T
Q  161 aaccaatttttatcgagtcgaac-----tcagacaagtttgactcgactcg 206  Q
    |||||||| |||||||||||| |     ||||||||||| |||||||||||    
T  33109899 aaccaattcttatcgagtcgagccgagctcagacaagttcgactcgactcg 33109849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 58 - 190
Target Start/End: Complemental strand, 12428213 - 12428081
Alignment:
Q  58 agttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgag 157  Q
    |||||||||||||||| | | ||||||||||||| ||||||||||||| ||||||| | || || | || |||||| | |||||||||||||||||||||    
T  12428213 agttgaacctaatgagtcgagtcgaactgttcgtaaactttaaacgagtcgaactcgagcttaacaaaaagttcgtatcgaactcgagtcgagtttcgag 12428114  T
Q  158 ctgaaccaatttttatcgagtcgaactcagaca 190  Q
    | ||| ||||| |||||||||||| ||||||||    
T  12428113 ccgaatcaattcttatcgagtcgagctcagaca 12428081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 34 - 181
Target Start/End: Complemental strand, 13311542 - 13311395
Alignment:
Q  34 tgaaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgt 133  Q
    |||||||||||||| ||| ||| ||| ||||||||| ||| | ||||||   |||||||||||||||||||||||||||| | ||| ||| |||||||||    
T  13311542 tgaaatatacaatttgagcaaatgaggtgaacctaacgagtcgaatcgagtggttcgtgaactttaaacgagccgaactcgagctagaaaaaaggttcgt 13311443  T
Q  134 tttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcga 181  Q
    || ||||||||  ||||||| |||  ||||||||| ||||||||||||    
T  13311442 ttcgaactcgaaccgagttttgagtcgaaccaattcttatcgagtcga 13311395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 181
Target Start/End: Complemental strand, 7957219 - 7957101
Alignment:
Q  63 aacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaa 162  Q
    ||||||| ||||| || ||||||||||||||||||||||||||| |||||| | || |||| |  |||||| ||||||||||| |||||||||||| |||    
T  7957219 aacctaacgagccgaaccgaactgttcgtgaactttaaacgagctgaactcgagctgaaaaaatagttcgtgttgaactcgagccgagtttcgagccgaa 7957120  T
Q  163 ccaatttttatcgagtcga 181  Q
    |||||| ||||||||||||    
T  7957119 ccaattcttatcgagtcga 7957101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 10346379 - 10346259
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||||| || |||||||||||||||||||||||||||||||||| | || |||| |  |||||| | ||||||||| |||||||||||| |    
T  10346379 tgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgagtttcgagccg 10346280  T
Q  161 aaccaatttttatcgagtcga 181  Q
    |||||||| ||||||| ||||    
T  10346279 aaccaattcttatcgaatcga 10346259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 36 - 181
Target Start/End: Complemental strand, 7436891 - 7436747
Alignment:
Q  36 aaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttt 135  Q
    |||||| ||||| ||| ||||||||||||||||| ||||  || | |  || |||||||||||||||||||||||||| |  | |||| |||||||||||    
T  7436891 aaatatgcaatttgagcaaacgagttgaacctaacgagctgaaccaagttgctcgtgaactttaaacgagccgaactcgagttgaaaa-aaggttcgttt 7436793  T
Q  136 tgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcga 181  Q
      ||||||||| ||||||||||| |||||| || ||||||||||||    
T  7436792 caaactcgagtggagtttcgagccgaaccatttcttatcgagtcga 7436747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 88 - 190
Target Start/End: Original strand, 9463696 - 9463797
Alignment:
Q  88 tcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaactcag 187  Q
    |||| ||||| ||||||||||||||| | ||||||| |||||| ||||||||||||||| ||||||| ||||||||||||| | ||||||| || |||||    
T  9463696 tcgtaaacttaaaacgagccgaactcgagctaaaaa-aaggtttgttttgaactcgagttgagtttcaagctgaaccaattctaatcgagttgagctcag 9463794  T
Q  188 aca 190  Q
    |||    
T  9463795 aca 9463797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 18962012 - 18961892
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||  ||||| || |||||||||||||||||||||||||| |||||||   || |||| |  ||| || | ||||||||| |||||||||||| |    
T  18962012 tgaacctagcgagccgaaccgaactgttcgtgaactttaaacgagtcgaactcgggctgaaaaaatagtttgtgtcgaactcgagccgagtttcgagccg 18961913  T
Q  161 aaccaatttttatcgagtcga 181  Q
    |||||||| ||||||||||||    
T  18961912 aaccaattcttatcgagtcga 18961892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 60 - 205
Target Start/End: Original strand, 25181137 - 25181282
Alignment:
Q  60 ttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagct 159  Q
    ||||| |||| ||||| |||||||||||| ||||| |||||||||| ||||||| | || |||| |  |||||| | |||||| ||  ||||||||||||    
T  25181137 ttgaaactaacgagccgaatcgaactgtttgtgaattttaaacgagtcgaactcgagcttaaaaaagagttcgtgtcgaactcaagctgagtttcgagct 25181236  T
Q  160 gaaccaatttttatcgagtcgaactcagacaagtttgactcgactc 205  Q
    || | |||| ||| |||||||| |||||||| |||  |||||||||    
T  25181237 gagcaaattcttaacgagtcgagctcagacaggttcaactcgactc 25181282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 158
Target Start/End: Original strand, 3082277 - 3082401
Alignment:
Q  34 tgaaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgt 133  Q
    |||||||| ||||| ||| ||||||||||||||||| ||| | ||  ||  || |||||||||| ||||||| ||||||| |  | |||| |||||||||    
T  3082277 tgaaatatgcaatttgagcaaacgagttgaacctaacgagtcgaactgagttgctcgtgaacttaaaacgagtcgaactcgagttgaaaaaaaggttcgt 3082376  T
Q  134 tttgaactcgagtcgagtttcgagc 158  Q
    || |||||| |||||||||||||||    
T  3082377 ttcgaactctagtcgagtttcgagc 3082401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 133
Target Start/End: Original strand, 10962387 - 10962467
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgt 133  Q
    |||||| |||||||||||||||| || | ||||||||||||||||||||||||||||||| || || |||| || ||||||    
T  10962387 aaacgaattgaacctaatgagccgaaccaaactgttcgtgaactttaaacgagccgaacttaagctgaaaaaaaagttcgt 10962467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 54 - 181
Target Start/End: Complemental strand, 473000 - 472873
Alignment:
Q  54 aacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagttt 153  Q
    |||||||||||| ||| ||||  |||| |||||||||||||||||||||||| ||||||| | || |||| |  |||||| | ||||| |||||||||||    
T  473000 aacgagttgaacttaacgagctgaatcaaactgttcgtgaactttaaacgagtcgaactcgagctgaaaaaagagttcgtgtcgaacttgagtcgagttt 472901  T
Q  154 cgagctgaaccaatttttatcgagtcga 181  Q
    | | |||| | |||| ||||| ||||||    
T  472900 caaactgagcaaattcttatcaagtcga 472873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 113
Target Start/End: Complemental strand, 6998721 - 6998662
Alignment:
Q  54 aacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactc 113  Q
    ||||| |||||||||| ||||| || |||||||||||||||||||||||||| |||||||    
T  6998721 aacgaattgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagtcgaactc 6998662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 108
Target Start/End: Original strand, 5641177 - 5641232
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccg 108  Q
    |||||| | ||||||||||||||||| | || ||||||||||||||||||||||||    
T  5641177 aaacgaatcgaacctaatgagccaaaccaaattgttcgtgaactttaaacgagccg 5641232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 112
Target Start/End: Complemental strand, 27925557 - 27925506
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaact 112  Q
    ||||||||||||||| || | ||||||||||||| |||||||||||||||||    
T  27925557 tgaacctaatgagccgaaccaaactgttcgtgaattttaaacgagccgaact 27925506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 22295496 - 22295406
Alignment:
Q  88 tcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagt 178  Q
    ||||||| |||||| ||||||||||| | |   ||| || ||| |||| |||||||||||||||||||||| ||||||||| | |||||||    
T  22295496 tcgtgaattttaaatgagccgaactcgagccggaaaaaaagtttgtttcgaactcgagtcgagtttcgagccgaaccaattctaatcgagt 22295406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 205
Target Start/End: Complemental strand, 26644056 - 26643911
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatct-aaaaagaaggttcgttttgaactcgagtcgagtttcgagct 159  Q
    ||||||||||||||| || | | |||||||| ||||||||||||||||||||  |  | ||||| || |||||| |  |||||||  |||| ||||| |     
T  26644056 tgaacctaatgagccgaaccaacctgttcgtcaactttaaacgagccgaacttgaggtgaaaaaaaaagttcgtgtcaaactcgaaacgaggttcgaacc 26643957  T
Q  160 gaaccaatttttatcgagtcgaactcagacaagtttgactcgactc 205  Q
    || |||||| ||| |||||||| | |||||| ||| ||||||||||    
T  26643956 gagccaattcttaacgagtcgagcacagacaggttcgactcgactc 26643911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 205
Target Start/End: Complemental strand, 26750022 - 26749877
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatct-aaaaagaaggttcgttttgaactcgagtcgagtttcgagct 159  Q
    ||||||||||||||| || | | |||||||| ||||||||||||||||||||  |  | ||||| || |||||| |  |||||||  |||| ||||| |     
T  26750022 tgaacctaatgagccgaaccaacctgttcgtcaactttaaacgagccgaacttgaggtgaaaaaaaaagttcgtgtcaaactcgaaacgaggttcgaacc 26749923  T
Q  160 gaaccaatttttatcgagtcgaactcagacaagtttgactcgactc 205  Q
    || |||||| ||| |||||||| | |||||| ||| ||||||||||    
T  26749922 gagccaattcttaacgagtcgagcacagacaggttcgactcgactc 26749877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 206
Target Start/End: Original strand, 8597406 - 8597521
Alignment:
Q  90 gtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaactcagac 189  Q
    |||||||| ||||||||  ||||  | ||||||| || ||| |||| |||||| |||||||||| |||||||||||||| ||||| |||||| || |||     
T  8597406 gtgaacttaaaacgagctaaacttgagctaaaaa-aatgtttgtttagaactcaagtcgagttttgagctgaaccaattcttatctagtcgagcttagaa 8597504  T
Q  190 aagtttgactcgactcg 206  Q
     | ||||| ||||||||    
T  8597505 gaatttgaatcgactcg 8597521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 6998667 - 6998623
Alignment:
Q  137 gaactcgagtcgagtttcgagctgaaccaatttttatcgagtcga 181  Q
    |||||||||||||||||||||| || | |||| ||||||||||||    
T  6998667 gaactcgagtcgagtttcgagccgagcaaattcttatcgagtcga 6998623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 4e-32; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 61 - 183
Target Start/End: Complemental strand, 41958714 - 41958592
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||||| || |||||||||||||||||||||||||||||||||| | || |||| |  |||||| | ||||||||| |||||||||||| |    
T  41958714 tgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgagtttcgagccg 41958615  T
Q  161 aaccaatttttatcgagtcgaac 183  Q
    |||||||||||||||||||||||    
T  41958614 aaccaatttttatcgagtcgaac 41958592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 61 - 224
Target Start/End: Original strand, 2647573 - 2647741
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||||| || |||  || |||||||||||||||||||||||||| | |  |||| |||||| ||||||||||||||||||||||||||| |    
T  2647573 tgaacctaacgagccgaaccgagttgctcgtgaactttaaacgagccgaactcgagcccaaaaaaaggttggttttgaactcgagtcgagtttcgagccg 2647672  T
Q  161 aaccaatttttatcgagtcgaac-----tcagacaagtttgactcgactcggctcatttcaagtcctaa 224  Q
    |||||||| |||||||||||| |     |||||||| || ||||||||||| |||||||| || |||||    
T  2647673 aaccaattcttatcgagtcgagccgagttcagacaaattcgactcgactcgactcatttccagccctaa 2647741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 36538244 - 36538124
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||||| || |||||||||||||||||||||||||||| ||||| | || |||| |  |||||| | ||||||||| |||||||||||| |    
T  36538244 tgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccaaactcgagctgaaaaaatagttcgtgtcgaactcgagccgagtttcgagccg 36538145  T
Q  161 aaccaatttttatcgagtcga 181  Q
    |||||||| ||||||||||||    
T  36538144 aaccaattcttatcgagtcga 36538124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 151
Target Start/End: Complemental strand, 1094076 - 1093959
Alignment:
Q  34 tgaaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgt 133  Q
    |||| ||||| ||||||||| ||||||||||||||| ||||| || |||   ||||| ||||||||||||||||||||||||  |||||| |||||||||    
T  1094076 tgaagtatacgattcgagtagacgagttgaacctaacgagccgaaccgagtagttcgcgaactttaaacgagccgaactcaagttaaaaaaaaggttcgt 1093977  T
Q  134 tttgaactcgagtcgagt 151  Q
    ||  ||||||||||||||    
T  1093976 ttcaaactcgagtcgagt 1093959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 27633309 - 27633189
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||||| || |||||||||||||||||||||||||||||||||| | || |||| |  ||| || ||||||| ||| |||||||||||| |    
T  27633309 tgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagtttgtgttgaacttgagccgagtttcgagccg 27633210  T
Q  161 aaccaatttttatcgagtcga 181  Q
    |||||||| ||||| ||||||    
T  27633209 aaccaattcttatcaagtcga 27633189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 85 - 205
Target Start/End: Complemental strand, 40675308 - 40675188
Alignment:
Q  85 tgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaact 184  Q
    |||| |||||||||||||||||| || |  |  |||||| | ||||||| | |||||||||||||||||||||| ||||||||| ||||||| |||| ||    
T  40675308 tgtttgtgaactttaaacgagccaaatttgagttaaaaaaatggttcgtatcgaactcgagtcgagtttcgagccgaaccaattcttatcgaatcgagct 40675209  T
Q  185 cagacaagtttgactcgactc 205  Q
    |||||||||| ||||||||||    
T  40675208 cagacaagttcgactcgactc 40675188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 80 - 183
Target Start/End: Complemental strand, 12139514 - 12139411
Alignment:
Q  80 cgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtc 179  Q
    ||||| |||||||||||||||||||||||||||| | || |||| |  |||||| | ||||||||| |||||||||||| ||||||||| ||||||||||    
T  12139514 cgaacagttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgagtttcgagccgaaccaattcttatcgagtc 12139415  T
Q  180 gaac 183  Q
    ||||    
T  12139414 gaac 12139411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 181
Target Start/End: Complemental strand, 20986211 - 20986111
Alignment:
Q  81 gaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcg 180  Q
    ||||||||||||||||||||||||||||||||| | || |||| |  |||||| | |||||| || |||||||||||| ||||||||| |||||||||||    
T  20986211 gaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcaagccgagtttcgagccgaaccaattcttatcgagtcg 20986112  T
Q  181 a 181  Q
    |    
T  20986111 a 20986111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 86 - 178
Target Start/End: Original strand, 3409847 - 3409939
Alignment:
Q  86 gttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagt 178  Q
    |||||||||||||||||||||||||||| |  |||||| ||||||||| | |||||||||||||||||| ||| || | |||| |||||||||    
T  3409847 gttcgtgaactttaaacgagccgaactcgagttaaaaaaaaggttcgtatcgaactcgagtcgagtttcaagccgagctaattcttatcgagt 3409939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 29804395 - 29804312
Alignment:
Q  96 tttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtc 179  Q
    |||||||||||||||||| |  ||| || ||||||| ||| ||||| |||||||||||||||| ||||||||||||||||||||    
T  29804395 tttaaacgagccgaactcgagttaagaaaaaggttcatttcgaacttgagtcgagtttcgagccgaaccaatttttatcgagtc 29804312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 214
Target Start/End: Complemental strand, 41648875 - 41648752
Alignment:
Q  96 tttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagt-----cgaactcagaca 190  Q
    |||||| ||||||||||||| || |||| ||| || ||||| |||||||||||| ||| ||||||||||||||||||||||||     | ||||||||||    
T  41648875 tttaaatgagccgaactcaagcttaaaaaaagatttgttttaaactcgagtcgaattttgagctgaaccaatttttatcgagttaagtcaaactcagaca 41648776  T
Q  191 agtttgactcgactcggctcattt 214  Q
      || ||||||||||| |||||||    
T  41648775 gtttcgactcgactcgactcattt 41648752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 181
Target Start/End: Original strand, 44741262 - 44741389
Alignment:
Q  54 aacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagttt 153  Q
    ||||| |||||||||| ||| |||| |||||||||||||||||||||||||| |||| |  | || |||| |  |||||| | |||||||||||||||||    
T  44741262 aacgaattgaacctaacgagtcaaaccgaactgttcgtgaactttaaacgagtcgaatttgagctgaaaaaagagttcgtgtcgaactcgagtcgagttt 44741361  T
Q  154 cgagctgaaccaatttttatcgagtcga 181  Q
    ||||| || | |||| ||||| ||||||    
T  44741362 cgagccgagcaaattcttatcaagtcga 44741389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 53 - 215
Target Start/End: Original strand, 38410203 - 38410365
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtt 152  Q
    |||||| |||||||||||||||| || | |||||||||||||||||||||||||| ||||| | || |||| || ||| || |  | |||||  |||| |    
T  38410203 aaacgaattgaacctaatgagccgaaccaaactgttcgtgaactttaaacgagcctaactcgagctgaaaaaaaagtttgtgtcaagctcgaaccgaggt 38410302  T
Q  153 tcgagctgaaccaatttttatcgagtcgaactcagacaagtttgactcgactcggctcatttc 215  Q
    |||  |||| |||||| ||| |||||||| |||| | | ||| || |||||||||||||||||    
T  38410303 tcggactgagccaattcttaacgagtcgagctcaaataggttcgattcgactcggctcatttc 38410365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 34 - 188
Target Start/End: Complemental strand, 40458526 - 40458372
Alignment:
Q  34 tgaaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgt 133  Q
    ||||||||  |||| ||| ||| ||||||||||||| ||| | || |||| || ||||||| |||||||||||||||||| |  | |||| || ||||||    
T  40458526 tgaaatatgtaatttgagcaaatgagttgaacctaacgagtcgaaccgaattgctcgtgaattttaaacgagccgaactcgagttgaaaaaaatgttcgt 40458427  T
Q  134 tttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaactcaga 188  Q
    || ||||||||||||||||| |||| ||| || || |||| ||||| | ||||||    
T  40458426 ttcgaactcgagtcgagttttgagccgaatcatttcttattgagtcaagctcaga 40458372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 112
Target Start/End: Complemental strand, 30711626 - 30711567
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaact 112  Q
    |||||| || ||||||||||||| || | |||||||||||||||||||||||||||||||    
T  30711626 aaacgaattaaacctaatgagccgaaccaaactgttcgtgaactttaaacgagccgaact 30711567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 112
Target Start/End: Original strand, 33164537 - 33164588
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaact 112  Q
    ||||||||| ||||| || |||||||||||||||||||||||||||||||||    
T  33164537 tgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaact 33164588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 34116718 - 34116777
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaact 112  Q
    |||||| |||||||||||||||| || | |||||||||||||||||||||||||| ||||    
T  34116718 aaacgaattgaacctaatgagccgaaccaaactgttcgtgaactttaaacgagccaaact 34116777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 33831050 - 33830993
Alignment:
Q  56 cgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactc 113  Q
    |||| ||||||||| ||||| || |||| |||||||||||||||||||||||||||||    
T  33831050 cgagctgaacctaacgagccgaaccgaattgttcgtgaactttaaacgagccgaactc 33830993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 20204353 - 20204413
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactc 113  Q
    |||||| ||||| |||||||| | || | ||||||||||||||||||||||||||||||||    
T  20204353 aaacgaattgaatctaatgagtcgaaccaaactgttcgtgaactttaaacgagccgaactc 20204413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 34064296 - 34064244
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactc 113  Q
    ||||||||| || || || ||||||||||||||||||||||||||||||||||    
T  34064296 tgaacctaacgaaccgaaccgaactgttcgtgaactttaaacgagccgaactc 34064244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 113
Target Start/End: Complemental strand, 33475796 - 33475737
Alignment:
Q  54 aacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactc 113  Q
    ||||| ||||||||||| | || |||| |||||||||| |||||||||||||||||||||    
T  33475796 aacgaattgaacctaataaaccgaatcaaactgttcgtaaactttaaacgagccgaactc 33475737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 112
Target Start/End: Complemental strand, 39689730 - 39689671
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaact 112  Q
    |||||| |||||||||||||||| || | ||||| |||||||||||||| ||||||||||    
T  39689730 aaacgaattgaacctaatgagccgaaccaaactgatcgtgaactttaaaggagccgaact 39689671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 82 - 226
Target Start/End: Complemental strand, 11027433 - 11027284
Alignment:
Q  82 aactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaattttta-----tcga 176  Q
    |||||||||||||||||||||||||||||||  |  |  ||| || |||||| |  |||||||  |||| ||||| | |||| |||| |||     | ||    
T  11027433 aactgttcgtgaactttaaacgagccgaacttgagttggaaaaaaagttcgtgtcaaactcgatccgaggttcgaaccgaacaaattcttaatgagttga 11027334  T
Q  177 gtcgaactcagacaagtttgactcgactcggctcatttcaagtcctaacc 226  Q
    |||||||||||||||||| || |||||||| |||||||| || |||||||    
T  11027333 gtcgaactcagacaagttcgattcgactcgactcatttccagccctaacc 11027284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 80 - 181
Target Start/End: Complemental strand, 39801269 - 39801168
Alignment:
Q  80 cgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtc 179  Q
    ||||||||| |||||  |||||||||| |||||| | || |||| |  |||||| | ||||||||| ||| ||||||||||||| |||| || |||||||    
T  39801269 cgaactgtttgtgaatcttaaacgagctgaactcgagctgaaaaaagagttcgtgtcgaactcgagccgaatttcgagctgaactaattcttctcgagtc 39801170  T
Q  180 ga 181  Q
    ||    
T  39801169 ga 39801168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 26435934 - 26435814
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||||| || |||| |||||||||||||||||| || ||||||| |  | |||| |   ||||| | ||||||||  |||||||||| | |    
T  26435934 tgaacctaacgagccgaaccgaattgttcgtgaactttaaacaagtcgaactcgagttgaaaaaatatttcgtgtcgaactcgaaccgagtttcgaaccg 26435835  T
Q  161 aaccaatttttatcgagtcga 181  Q
    |||||||| ||||||| ||||    
T  26435834 aaccaattcttatcgaatcga 26435814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 1093964 - 1093922
Alignment:
Q  173 tcgagtcgaactcagacaagtttgactcgactcggctcatttc 215  Q
    |||||||||||||||||| ||| ||||||||||| ||||||||    
T  1093964 tcgagtcgaactcagacaggttcgactcgactcgactcatttc 1093922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 202
Target Start/End: Complemental strand, 37071323 - 37071206
Alignment:
Q  85 tgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaact 184  Q
    ||||||||||| |||| | |||| ||||| | || |||| |||||| ||||||| || ||||| |||||||||   |||| |||||| |||||| || ||    
T  37071323 tgttcgtgaaccttaagcaagccaaactcgagcttaaaaaaaggtttgttttgatctagagtcaagtttcgaggcaaacctatttttgtcgagttgagct 37071224  T
Q  185 cagacaagtttgactcga 202  Q
    ||| || |||||| ||||    
T  37071223 cagtcatgtttgattcga 37071206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 9e-27; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 61 - 205
Target Start/End: Complemental strand, 43967049 - 43966900
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||| ||||| || |||  || |||||||||||||||||||||||||| | |  |||| ||  |||||||||||||||||||||||||||||| |    
T  43967049 tgaacctaacgagccgaaccgagttgctcgtgaactttaaacgagccgaactcgagcccaaaaaaaaattcgttttgaactcgagtcgagtttcgagccg 43966950  T
Q  161 aaccaatttttatcgagtcgaac-----tcagacaagtttgactcgactc 205  Q
    |||||||| |||||||||||| |     ||||||||||| ||||||||||    
T  43966949 aaccaattcttatcgagtcgagccgagttcagacaagttcgactcgactc 43966900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 181
Target Start/End: Complemental strand, 12377918 - 12377768
Alignment:
Q  31 ttgtgaaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggtt 130  Q
    |||||||| || ||||||||||||||||| | |||||||||||   || |||  |||| ||||||||||||||||  |||||| |  |||||| |  |||    
T  12377918 ttgtgaaacatgcaattcgagtaaacgagataaacctaatgagtggaaccgagttgtttgtgaactttaaacgagatgaactcgagttaaaaaaatagtt 12377819  T
Q  131 cgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcga 181  Q
    ||||| |||||||||||||||||||||||||||  ||| ||||||| ||||    
T  12377818 cgtttcgaactcgagtcgagtttcgagctgaacacattcttatcgaatcga 12377768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 215
Target Start/End: Original strand, 25731853 - 25731981
Alignment:
Q  87 ttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaactca 186  Q
    ||||||||||||||| |||||||||||||  |||||| | |||| |  | ||||| ||||||| |||||||| ||||||||| |||||||||||| ||||    
T  25731853 ttcgtgaactttaaatgagccgaactcaagttaaaaaaagggtttgcatcgaacttgagtcgactttcgagccgaaccaattcttatcgagtcgagctca 25731952  T
Q  187 gacaagtttgactcgactcggctcatttc 215  Q
    ||||| || |  |||||||| ||||||||    
T  25731953 gacaaattcggttcgactcgactcatttc 25731981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 9413262 - 9413357
Alignment:
Q  86 gttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcga 181  Q
    |||||||||||||||| ||||||||||  | ||||||| ||||||||| | |||||| ||||||||||||||| |||||| || ||||||||||||    
T  9413262 gttcgtgaactttaaatgagccgaacttgagctaaaaaaaaggttcgtgtcgaactcaagtcgagtttcgagccgaaccatttcttatcgagtcga 9413357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 60 - 158
Target Start/End: Complemental strand, 22563426 - 22563328
Alignment:
Q  60 ttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagc 158  Q
    |||||||||| || || || |||||||||||||||| ||||||||| ||||||| | || |||| |  |||||| ||||||||||||||||||||||||    
T  22563426 ttgaacctaacgaaccgaaccgaactgttcgtgaaccttaaacgagtcgaactcgagctgaaaaaagagttcgtgttgaactcgagtcgagtttcgagc 22563328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 13784295 - 13784218
Alignment:
Q  138 aactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaactcagacaagtttgactcgactcggctcatttc 215  Q
    |||||||||| ||||| |||| |||||||||||||||||||||| |||||||| ||| |||||||||||  |||||||    
T  13784295 aactcgagtcaagttttgagccgaaccaatttttatcgagtcgagctcagacaggttcgactcgactcgaatcatttc 13784218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 178
Target Start/End: Complemental strand, 11161226 - 11161128
Alignment:
Q  80 cgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagt 178  Q
    ||||||||||||||||||||||||||| |||||| | || |||| |  ||||||   ||||||||| |||| ||||||| ||||||||| |||||||||    
T  11161226 cgaactgttcgtgaactttaaacgagctgaactcgagctgaaaaaatagttcgtggcgaactcgagccgaggttcgagccgaaccaattcttatcgagt 11161128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 22930898 - 22930984
Alignment:
Q  137 gaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaactcagacaagtttgactcgactcggctcatttcaagtccta 223  Q
    ||||||||| |||||||||||| ||||||||| ||||||||||||  ||||||| ||| |  |||||||| |||||||| |||||||    
T  22930898 gaactcgagccgagtttcgagccgaaccaattcttatcgagtcgagttcagacaggttcggttcgactcgactcatttccagtccta 22930984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 17865723 - 17865764
Alignment:
Q  137 gaactcgagtcgagtttcgagctgaaccaatttttatcgagt 178  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  17865723 gaactcgagtcgagtttcgagctgaaccaattcttatcgagt 17865764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 149
Target Start/End: Complemental strand, 24854146 - 24854058
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcga 149  Q
    ||||| ||| ||||||| ||||  |||| || ||||| ||| ||||||||||||| ||||||| |||||| |||| |||||||||||||    
T  24854146 tgaacgtaacgagccaagtcgagttgtttgtaaacttaaaatgagccgaactcaaactaaaaaaaaggtttgtttcgaactcgagtcga 24854058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 39477559 - 39477465
Alignment:
Q  86 gttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcga 181  Q
    ||||||||||||||||| |||||||||| | ||| ||| || |||||||| ||| ||||| | ||||||||   ||||||||| ||||||||||||    
T  39477559 gttcgtgaactttaaacaagccgaactcgagctagaaa-aatgttcgtttcgaattcgagccaagtttcgaatcgaaccaattcttatcgagtcga 39477465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 123
Target Start/End: Complemental strand, 1091226 - 1091184
Alignment:
Q  81 gaactgttcgtgaactttaaacgagccgaactcaatctaaaaa 123  Q
    ||||||||||||||||||||||||| ||||||||| |||||||    
T  1091226 gaactgttcgtgaactttaaacgagtcgaactcaaactaaaaa 1091184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 9133528 - 9133426
Alignment:
Q  93 aactttaaacgagccgaactcaa-tctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaactcagacaa 191  Q
    ||||||||||||| ||||||| | | |||||| |||||||| ||  || ||||||||||||| || |||||||| || |||||||||||| | || ||||    
T  9133528 aactttaaacgagtcgaactcgagtttaaaaaaaaggttcgattcaaattcgagtcgagttttgaactgaaccatttcttatcgagtcgagcacatacaa 9133429  T
Q  192 gtt 194  Q
    |||    
T  9133428 gtt 9133426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 108
Target Start/End: Complemental strand, 453105 - 453058
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccg 108  Q
    |||||||||||| || || | |||||||||||||||||||||||||||    
T  453105 tgaacctaatgaaccgaaccaaactgttcgtgaactttaaacgagccg 453058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 112
Target Start/End: Complemental strand, 23180916 - 23180865
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaact 112  Q
    ||||||||||||||| || | |||||||||| ||||||||||||| ||||||    
T  23180916 tgaacctaatgagccgaaccaaactgttcgtaaactttaaacgagtcgaact 23180865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 15211954 - 15212031
Alignment:
Q  137 gaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaactcagacaagtttgactcgactcggctcattt 214  Q
    ||||||||| ||||||||||||| |||||| | |||| ||||||| || || |||||| || ||| |||| |||||||    
T  15211954 gaactcgagccgagtttcgagctaaaccaaatcttatggagtcgagcttaggcaagttcgattcggctcgactcattt 15212031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 13521961 - 13522013
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgag 105  Q
    ||||||||| ||||||| ||| ||||||||   ||||||||||||||||||||    
T  13521961 aaacgagttaaacctaacgagtcaaatcgagtagttcgtgaactttaaacgag 13522013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 13611496 - 13611548
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgag 105  Q
    ||||||||| ||||||| ||| ||||||||   ||||||||||||||||||||    
T  13611496 aaacgagttaaacctaacgagtcaaatcgagtagttcgtgaactttaaacgag 13611548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 112
Target Start/End: Original strand, 27189526 - 27189578
Alignment:
Q  60 ttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaact 112  Q
    ||||||||||||||||||| | || ||||| ||| ||||||| ||||||||||    
T  27189526 ttgaacctaatgagccaaagcaaattgttcctgatctttaaatgagccgaact 27189578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 18877 - 18757
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctg 160  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||| | || |||| |  |||||| | ||||||||  ||||||| |||| |    
T  18877 tgaacctaatgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgaaccgagttttgagccg 18778  T
Q  161 aaccaatttttatcgagtcga 181  Q
    |||||||| ||||||||||||    
T  18777 aaccaattcttatcgagtcga 18757  T

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Target: scaffold0106 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 26593 - 26540
Alignment:
Q  128 gttcgttttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcga 181  Q
    |||||||| ||||||||||||| |||||||||||||||||| ||||||||||||    
T  26593 gttcgtttcgaactcgagtcgaatttcgagctgaaccaattcttatcgagtcga 26540  T

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Target: scaffold0224 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 7925 - 7984
Alignment:
Q  53 aaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaact 112  Q
    |||||| |||||||||||||||| || | ||||||||||||||||||| |||||||||||    
T  7925 aaacgaattgaacctaatgagccgaaccaaactgttcgtgaactttaagcgagccgaact 7984  T

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Target: scaffold0135 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 145
Target Start/End: Original strand, 33386 - 33497
Alignment:
Q  34 tgaaatatacaattcgagtaaacgagttgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgt 133  Q
    |||||||| ||||| ||| ||| ||| ||||||||||||| | || |||   |||| |||||||||||| |||||||||| | ||||||| |||||||||    
T  33386 tgaaatatgcaatttgagcaaatgaggtgaacctaatgagtcgaaccgagtggttcatgaactttaaacaagccgaactcgagctaaaaaaaaggttcgt 33485  T
Q  134 tttgaactcgag 145  Q
    ||  ||||||||    
T  33486 ttgaaactcgag 33497  T

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Target: scaffold0746 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0746
Description:

Target: scaffold0746; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 135 - 215
Target Start/End: Original strand, 5333 - 5413
Alignment:
Q  135 ttgaactcgagtcgagtttcgagctgaaccaatttttatcgagtcgaactcagacaagtttgactcgactcggctcatttc 215  Q
    ||||||||||||||| |||||| | ||||||||| ||||||| |||| ||||||||  ||||  |||||||| ||||||||    
T  5333 ttgaactcgagtcgactttcgaaccgaaccaattcttatcgaatcgagctcagacagatttggttcgactcgactcatttc 5413  T

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Target: scaffold0170 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 173
Target Start/End: Complemental strand, 4606 - 4518
Alignment:
Q  85 tgttcgtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagctgaaccaatttttat 173  Q
    |||| ||||||||||||||||| |||||| | | | ||| |||||| || ||||| |||||| ||||| ||||| ||||||||| ||||    
T  4606 tgtttgtgaactttaaacgagctgaactcgagccataaaaaaggtttgtattgaattcgagttgagttgcgagccgaaccaattcttat 4518  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 4816 - 4748
Alignment:
Q  90 gtgaactttaaacgagccgaactcaatctaaaaagaaggttcgttttgaactcgagtcgagtttcgagc 158  Q
    |||||||||||||||||||||||  |   ||||| | ||||||| | ||||||||||||||||||||||    
T  4816 gtgaactttaaacgagccgaacttgagtcaaaaaaatggttcgtatcgaactcgagtcgagtttcgagc 4748  T

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Target: scaffold0658 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0658
Description:

Target: scaffold0658; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 106
Target Start/End: Original strand, 6377 - 6422
Alignment:
Q  61 tgaacctaatgagccaaatcgaactgttcgtgaactttaaacgagc 106  Q
    ||||||||| ||||| || |||||||||||||||||||| ||||||    
T  6377 tgaacctaacgagccgaaccgaactgttcgtgaactttagacgagc 6422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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