View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17576_high_44 (Length: 333)
Name: NF17576_high_44
Description: NF17576
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17576_high_44 |
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Alignment Details
Target: chr7 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 327
Target Start/End: Complemental strand, 33193690 - 33193369
Alignment:
| Q |
1 |
aggaaatgtgggttgcttcaatatcacctactaaatgactatatatatgcaaaactaacttggtcttgttgactaacgtgaatccaacgcgattcccata |
100 |
Q |
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| T |
33193690 |
aggaaatgtgggttgctccaataccacctactaaatgactatatatatgcaaaaataaattggttttgttgaataacgtgaatccaacgcgattcccata |
33193591 |
T |
|
| Q |
101 |
taagtaccactaattaatcacatcacaacacaacacaacattaaacattgtcgtgacatgtttttaggtatgttatccaaaagtgtaattgcatgcatat |
200 |
Q |
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| T |
33193590 |
taagtaccactaattaatcacatcacaacacaaca-----ttaaacatggtcgtgacatgtttttaggtatgttatccaaaagtgtaattgcatgcatat |
33193496 |
T |
|
| Q |
201 |
gatatgacacagctactactagtactaagcttagatccattcccacactactctgtcccaagacaaacaggtagtaggttttggtttcccaagatgttct |
300 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33193495 |
gatatgacacagctactactagtactaagcttagatctattcccacactactctgtcccaagacaaacaggtagtaggttttggtttcccaagatgttct |
33193396 |
T |
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| Q |
301 |
tttccaacttgcgttatcttcttctca |
327 |
Q |
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|||||||||||||| |||||||||||| |
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| T |
33193395 |
tttccaacttgcgtcatcttcttctca |
33193369 |
T |
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