View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17576_low_53 (Length: 284)
Name: NF17576_low_53
Description: NF17576
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17576_low_53 |
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Alignment Details
Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 30 - 265
Target Start/End: Complemental strand, 37702062 - 37701827
Alignment:
| Q |
30 |
agcacgggaatcatatatataatgaaagatatcgagcacaaaggaaactcataaccaatacaatgtttagaacaacaataaaaaagagaaacaaaatcga |
129 |
Q |
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| T |
37702062 |
agcacgggaatcatatatataatgaaagaaatcgagcacaaggggaactcctaaccaatacaatgtttagaacaagaataaaaaagagaaacaaaatcga |
37701963 |
T |
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| Q |
130 |
taatattgagcacaagaaccggaatacgaagaattcaaaatctagctcaaagacggaagagggttcggtaacatagttaatttaaatgggtaattaatga |
229 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||| |||||||| |
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| T |
37701962 |
taatattgagcacaagaaccagaatacgaagaattcaaaatctagctcaaagacggaagggggttcagtaacgtagttaatttaaatgggtgattaatga |
37701863 |
T |
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| Q |
230 |
atataacaaatatcataattcattagttgtctactg |
265 |
Q |
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|||||||||||||| ||||||||||||||||||||| |
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| T |
37701862 |
atataacaaatatcgtaattcattagttgtctactg |
37701827 |
T |
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